Citrus Sinensis ID: 014344

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420------
Protein Sequence
MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEVNDEMNKNRGGEKVNNQRHACEEDNFLVF
Secondary Structure (PSIPRED)
ccHHHHccccccccccccccEEEEcccccEEEEEEEEcccccEEEEEcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccEEEEEEccccEEEEEEccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHcccHHHcEEEEEcccccEEEEEEEEcccccEEEEEEccHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccEEEEEEEEcccccEEEEEEEccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEccccccEEccccEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccHHHHHccccccHHHccHHHHccccEccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHcccHHHHHcccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccHccccEEEccccccEEEc
Coil and Loop (DISEMBL)
mndvvndrpirsldFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSkeltnndngdkyrrISFEQRVLRnvehpllprlrgvlstdkfvgyaidycpgrdlhslrkqqseqmfsdDTIRFYAAELVLALEYLHNMgivyrdlkpenimiqeNGHIMLVDfdlstklspktpqaspktvlaANTRSGIKKRRSFLSKFCssgisledpvhsprigpdppsrsdsdsseksnsfvgteeyvapeiiegkghdfavDWWSLGVVLHEMlygatpfrgssrkeTFYRIlcrppdlvgeptpLRNLIRRLLekdptkrigveeikgheffkgVNWELLLkisrppniparfehennesdgrgrdgtkeidVEKFVQGIfagggdaeqknevndemnknrggekvnnqrhaceednflvf
Flexible Loop (DISEMBL)
mndvvndrpirsldfSCLRIVSALGRGAKGVVFLvkdvessesfALKVIWRDLIekkskeltnndngdkyrrISFEqrvlrnvehpllprlrgvlstdKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSpktpqaspktvlaantrsgikkrRSFLSKFCssgisledpvhsprigpdppsrsdsdssekSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGAtpfrgssrKETFYRILcrppdlvgeptplRNLIRrllekdptkrigveeikgheffkgvNWELLLKISRPpniparfehennesdgrgrdgtkeIDVEKFVQGIfagggdaeqknevNDEMnknrggekvnnqrhaceednflvf
Low Complexity Region (SEG)
MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFyaaelvlaleylHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHsprigpdppsrsdsdsseksnsFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEVNDEMNKNRGGEKVNNQRHACEEDNFLVF
Disordered region (IsUnstruct)
*********IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK************KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL*******MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS*********************************************************************VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS****************************VEKFVQGIFA***************************************
Disordered Region (DISOPRED)
*****************LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS**************************************************************NSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKE************************************************LVF
Disordered Region (DISEMBL)
********PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL*************AANTRSGIKKRRSFLSKFCSSGISLEDPVHS***********************GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEH**********DGTKEIDVEKFVQGIFAGGGDAEQKNEVNDEMNKNRGGEKVNNQRHACEEDNFLVF
Disordered Region (DISPRO)
*NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP*****************************GISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDG*******************************NDEMNKNRGGEKVNNQRHACEEDNFLVF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEVNDEMNKNRGGEKVNNQRHACEEDNFLVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	426	2.2.26 [Sep-21-2011]
Q9LSF1	421	Serine/threonine-protein	yes	no	0.957	0.969	0.583	1e-131
Q9LFA2	934	Serine/threonine-protein	no	no	0.774	0.353	0.367	3e-64
Q2RBR1	921	Phototropin-1B OS=Oryza s	no	no	0.737	0.340	0.396	4e-64
Q2QYY8	921	Phototropin-1A OS=Oryza s	no	no	0.737	0.340	0.396	4e-64
P15792	609	Protein kinase PVPK-1 OS=	N/A	no	0.765	0.535	0.372	8e-64
P93025	915	Phototropin-2 OS=Arabidop	no	no	0.676	0.314	0.406	1e-63
Q0DCT8	589	Protein kinase G11A OS=Or	no	no	0.776	0.561	0.361	3e-63
A2YBX5	589	Protein kinase G11A OS=Or	N/A	no	0.776	0.561	0.361	4e-63
Q05999	578	Serine/threonine-protein	no	no	0.786	0.579	0.372	1e-62
Q9ST27	907	Phototropin-2 OS=Oryza sa	no	no	0.680	0.319	0.411	2e-61

>sp|Q9LSF1|OXI1_ARATH Serine/threonine-protein kinase OXI1 OS=Arabidopsis thaliana GN=OXI1 PE=1 SV=1

 Score =  469 bits (1208), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/430 (58%), Positives = 313/430 (72%), Gaps = 22/430 (5%)

Query: 6   NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
           +++  R+LDF+ L ++S LGRGAKGVVFLV+D + ++  ALKVI ++ IEKK K   + D
Sbjct: 5   DEKQSRALDFNRLEVLSLLGRGAKGVVFLVRD-DDAKLLALKVILKEAIEKKKKGRESED 63

Query: 66  NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
             D+Y+R+SFEQ VL   +HPL P L GVL+TDK +GYAIDYCPG++L+SLRK QSE MF
Sbjct: 64  --DEYKRVSFEQGVLSRFDHPLFPSLHGVLATDKVIGYAIDYCPGQNLNSLRKMQSESMF 121

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
           SD+ IRFYAAELVLAL+YLHN GIVYRDLKP+N+MIQENGH+ML+DFDLST L+P+TPQ 
Sbjct: 122 SDEIIRFYAAELVLALDYLHNQGIVYRDLKPDNVMIQENGHLMLIDFDLSTNLAPRTPQP 181

Query: 186 SPKTVLAANTRSGIKKRRSF-LSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF 244
           SP     + T    +K+R F  + FC+SGIS   P  S  +           S EKSNSF
Sbjct: 182 SPSLSKPSPTMK--RKKRLFRFTSFCNSGIS---PQESISVHSSSTLAVSDSSGEKSNSF 236

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
           VGTEEYVAPE+I G GHDFAVDWWSLGVVL+EMLYGATPFRGS+RKETFYRIL +PP+L 
Sbjct: 237 VGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFYRILSKPPNLT 296

Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNE 364
           GE T LR+LIRRLLEKDP++RI VEEIKGH+FF+GV+WE ++ +SRPP IPA      ++
Sbjct: 297 GETTSLRDLIRRLLEKDPSRRINVEEIKGHDFFRGVDWEKVILVSRPPYIPAP-----DD 351

Query: 365 SDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKN-----EVNDEMNKNRGGEKVN--NQRHA 417
              +G D   ++DVE  VQ IFA   + E+++       N ++  N  GE V   N  H 
Sbjct: 352 GGDKGTDVNTKMDVENIVQEIFAARQEREKQSGDNNKNANMKIKDNTSGEWVKGLNNNHD 411

Query: 418 CEED-NFLVF 426
            E D NFLVF
Sbjct: 412 LESDNNFLVF 421

Involved in oxidative burst-mediated signaling. Required for basal resistance to P.parasitica infection and root hair growth. Partly required for the activation of MPK3 and MPK6 by hydrogen peroxide and cellulase elicitor.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LFA2|KIPK_ARATH Serine/threonine-protein kinase KIPK OS=Arabidopsis thaliana GN=KIPK PE=1 SV=1

 Score =  246 bits (627), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/389 (36%), Positives = 216/389 (55%), Gaps = 59/389 (15%)

Query: 12  SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR 71
           SL      ++  LG G  G V+L + + ++  FA+KV+  + + ++ K            
Sbjct: 532 SLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKS----------P 581

Query: 72  RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           R   E+ +L+ ++HP LP L    ++D      ++YCPG DLH LR++Q  + F +   R
Sbjct: 582 RAQAEREILKMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFPEPAAR 641

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           FY AE++LALEYLH +GI+YRDLKPENI+++E+GHIML DFDLS +       A   T++
Sbjct: 642 FYVAEILLALEYLHMLGIIYRDLKPENILVREDGHIMLTDFDLSLRC------AVNPTLV 695

Query: 192 AANTRSGIKKRR--------SFLSKFCSSGISLEDPVHSPRIGPD-----PPSRSD---- 234
            +N+  G    R        + +  FC +  S +    SPR+  +      P R D    
Sbjct: 696 RSNSPPGKDPARISGPYNTSNCIQPFCITEPSCQVSCFSPRLSSNQQQGRKPKRGDHLSK 755

Query: 235 --------------SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYG 280
                           +  +SNSFVGT EY+APEII+G+GH  AVDWW+ GV+L+E+LYG
Sbjct: 756 TQQHLSRSLPQLVAEPTEARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVLLYELLYG 815

Query: 281 ATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIRRLLEKDPTKRIGVE----EI 331
            TPF+G +  ET   ++ +  +L    +PL     ++LIR LL K+P  R+G E    EI
Sbjct: 816 KTPFKGYNNDETLANVVLQ--NLKFPDSPLVSFQAKDLIRGLLVKEPENRLGSEKGSVEI 873

Query: 332 KGHEFFKGVNWELLLKISRPPNIPARFEH 360
           K H FF+G+NW  L++ + PP +P  +E+
Sbjct: 874 KRHPFFEGLNWA-LIRCAIPPELPDFYEY 901

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2RBR1|PHT1B_ORYSJ Phototropin-1B OS=Oryza sativa subsp. japonica GN=PHOT1B PE=1 SV=2

 Score =  245 bits (626), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/368 (39%), Positives = 199/368 (54%), Gaps = 54/368 (14%)

Query: 1   MNDVVNDRPIR-------SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDL 53
           M D  + R I+       S+     R V  LG G  G V LV+ + + E FA+K + + +
Sbjct: 570 MKDTASWRAIQKVLESGESIGLKHFRPVKPLGSGDTGSVHLVELLNTGEYFAMKAMDKSI 629

Query: 54  IEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL 113
           +           N +K  R + E+++L  ++HP LP L     T   +    DYCPG +L
Sbjct: 630 ML----------NRNKVHRATAERQILDLLDHPFLPTLYASFQTKTHICLITDYCPGGEL 679

Query: 114 HSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD 173
             L   Q  ++  +D +RFYAAE+V+ALEYLH  GI+YRDLKPENI++  +GHI L DFD
Sbjct: 680 FVLLDNQPLKVLHEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENILLHRDGHISLTDFD 739

Query: 174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS 233
           LS   S +     P+  L  +     KK R    K  S  I   +P+ +           
Sbjct: 740 LSCLTSCR-----PQVFLPEDADE--KKGR----KNGSYPIFFAEPMRA----------- 777

Query: 234 DSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF 293
                  SNSFVGTEEY+APEII G GH  AVDWW+LG++L+EMLYG TPFRG +R+ TF
Sbjct: 778 -------SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTF 830

Query: 294 YRIL---CRPPDLVGEPTPLRNLIRRLLEKDPTKRI----GVEEIKGHEFFKGVNWELLL 346
             IL    R P  +      R L+ RLL +DP  R+    G  EIKGH FF+G+NW  L+
Sbjct: 831 ANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFRGINWP-LI 889

Query: 347 KISRPPNI 354
           + + PP +
Sbjct: 890 RATAPPKL 897

Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2

 Score =  245 bits (626), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/368 (39%), Positives = 199/368 (54%), Gaps = 54/368 (14%)

Query: 1   MNDVVNDRPIR-------SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDL 53
           M D  + R I+       S+     R V  LG G  G V LV+ + + E FA+K + + +
Sbjct: 570 MKDTASWRAIQKVLESGESIGLKHFRPVKPLGSGDTGSVHLVELLNTGEYFAMKAMDKSI 629

Query: 54  IEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL 113
           +           N +K  R + E+++L  ++HP LP L     T   +    DYCPG +L
Sbjct: 630 ML----------NRNKVHRATAERQILDLLDHPFLPTLYASFQTKTHICLITDYCPGGEL 679

Query: 114 HSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD 173
             L   Q  ++  +D +RFYAAE+V+ALEYLH  GI+YRDLKPENI++  +GHI L DFD
Sbjct: 680 FVLLDNQPLKVLHEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENILLHRDGHISLTDFD 739

Query: 174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS 233
           LS   S +     P+  L  +     KK R    K  S  I   +P+ +           
Sbjct: 740 LSCLTSCR-----PQVFLPEDADE--KKGR----KNGSYPIFFAEPMRA----------- 777

Query: 234 DSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF 293
                  SNSFVGTEEY+APEII G GH  AVDWW+LG++L+EMLYG TPFRG +R+ TF
Sbjct: 778 -------SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQRTF 830

Query: 294 YRIL---CRPPDLVGEPTPLRNLIRRLLEKDPTKRI----GVEEIKGHEFFKGVNWELLL 346
             IL    R P  +      R L+ RLL +DP  R+    G  EIKGH FF+G+NW  L+
Sbjct: 831 ANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFRGINWP-LI 889

Query: 347 KISRPPNI 354
           + + PP +
Sbjct: 890 RATAPPKL 897

Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P15792|KPK1_PHAVU Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1

 Score =  244 bits (623), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 140/376 (37%), Positives = 212/376 (56%), Gaps = 50/376 (13%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           L+    R++  LG G  G V+L +   +  SFA+KV+ +  +  + K L          R
Sbjct: 224 LEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKVMNKTELANRKKLL----------R 273

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E+ +L++++HP LP L     T+ F    +++CPG DLH+LR++Q  + FS+  +RF
Sbjct: 274 AQTEREILQSLDHPFLPTLYTHFETEIFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRF 333

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           Y AE++L+LEYLH +GI+YRDLKPEN++++E+GHIML DFDLS + S      SP  V +
Sbjct: 334 YVAEVLLSLEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCS-----VSPTLVKS 388

Query: 193 ANT----RSGIKKRRSFLSKFCSSGISLEDP-VHSPR---------------------IG 226
           +N      SG   + S +   C        P   +PR                     + 
Sbjct: 389 SNNLQTKSSGYCVQPSCIEPTCVMQPDCIKPSCFTPRFLSGKSKKDKKSKPKNDMHNQVT 448

Query: 227 PDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRG 286
           P P   ++  ++ +S SFVGT EY+APEII+G+GH  AVDWW+ G+ L+E+L+G TPF+G
Sbjct: 449 PLPELIAEP-TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKG 507

Query: 287 SSRKETFYRILCRPPDLVGEPT---PLRNLIRRLLEKDPTKRI----GVEEIKGHEFFKG 339
           S+ + T + ++ +P      PT     R+LIR LL K+P  R+    G  EIK H FF+ 
Sbjct: 508 SANRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQN 567

Query: 340 VNWELLLKISRPPNIP 355
           VNW  L++ + PP +P
Sbjct: 568 VNWA-LIRCATPPEVP 582

Phaseolus vulgaris (taxid: 3885)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93025|PHOT2_ARATH Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2

 Score =  244 bits (622), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/344 (40%), Positives = 197/344 (57%), Gaps = 56/344 (16%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  LG G  G V LV+   + E +A+K +          E T   N +K  R   E+ ++
Sbjct: 580 IKPLGSGDTGSVHLVELKGTGELYAMKAM----------EKTMMLNRNKAHRACIEREII 629

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
             ++HP LP L     T   V    D+CPG +L +L  +Q  ++ ++D+ RFYAAE+V+ 
Sbjct: 630 SLLDHPFLPTLYASFQTSTHVCLITDFCPGGELFALLDRQPMKILTEDSARFYAAEVVIG 689

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           LEYLH +GIVYRDLKPENI+++++GHI+L DFDLS   +      +P+ ++ A   +  K
Sbjct: 690 LEYLHCLGIVYRDLKPENILLKKDGHIVLADFDLSFMTT-----CTPQLIIPA---APSK 741

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
           +RR           S   P+  P    +P        S +SNSFVGTEEY+APEII G G
Sbjct: 742 RRR-----------SKSQPL--PTFVAEP--------STQSNSFVGTEEYIAPEIITGAG 780

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--------PPDLVGEPTPLRN 312
           H  A+DWW+LG++L+EMLYG TPFRG +R++TF  IL +        P  LVG     R 
Sbjct: 781 HTSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLVG-----RQ 835

Query: 313 LIRRLLEKDPTKRI----GVEEIKGHEFFKGVNWELLLKISRPP 352
           LI  LL +DP+ R+    G  EIK H FF+G+NW L+  +S PP
Sbjct: 836 LINTLLNRDPSSRLGSKGGANEIKQHAFFRGINWPLIRGMSPPP 879

Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for photo-induced movements. Mediates calcium spiking of extra- and intracellular origins in response to blue light. Involved in hypocotyl phototropism. Contributes to the chloroplast accumulation in low blue light and mediates their translocation (avoidance response) at high fluence. Regulates stomata opening and photomorphogenesis response of leaf tissue. Not involved in hypocotyl elongation inhibition, anthocyanin accumulation or cotyledon opening.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0DCT8|G11A_ORYSJ Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1

 Score =  243 bits (619), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 213/385 (55%), Gaps = 54/385 (14%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           L  S  +++  LG G  G V+L +   +   FA+KV+ +  +  + K L          R
Sbjct: 190 LGLSHFKLLKKLGCGDIGSVYLSELSGTKSYFAMKVMDKASLASRKKLL----------R 239

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E+ +L+ ++HP LP L     TDKF    +++CPG DLH+LR++Q  + F +  ++F
Sbjct: 240 AQTEKEILQCLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQRGKYFPEQAVKF 299

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           Y AE++LA+EYLH +GI+YRDLKPEN++++E+GHIML DFDLS + +      SP  + +
Sbjct: 300 YVAEILLAMEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA-----VSPTLIRS 354

Query: 193 ANTRSGIKKRRSFLSKFC--------SSGISLEDPVHSPRIGPDPPSRSDSD-------- 236
           +N  +   ++ +    +C        S  I       +   GP   S+S  D        
Sbjct: 355 SNPDAEALRKNN--QAYCVQPACVEPSCMIQPSCATPTTCFGPRFFSKSKKDRKPKPEVV 412

Query: 237 -------------SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP 283
                        S  +S SFVGT EY+APEII+G+GH  AVDWW+ G+ L+E+L+G TP
Sbjct: 413 NQVSPWPELIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 472

Query: 284 FRGSSRKETFYRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKRIGVE----EIKGHEF 336
           F+GS  + T + ++ +P   P+        R+LIR LL K+P +R+G +    EIK H F
Sbjct: 473 FKGSGNRATLFNVIGQPLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPF 532

Query: 337 FKGVNWELLLKISRPPNIPARFEHE 361
           F+GVNW  L++ + PP +P   E E
Sbjct: 533 FEGVNWA-LIRCASPPEVPRPVEIE 556

May play a role in the regulation of metabolism and signal transduction processes.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2YBX5|G11A_ORYSI Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1

 Score =  242 bits (618), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/385 (36%), Positives = 213/385 (55%), Gaps = 54/385 (14%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           L  S  +++  LG G  G V+L +   +   FA+KV+ +  +  + K L          R
Sbjct: 190 LGLSHFKLLKKLGCGDIGSVYLSELNGTKSYFAMKVMDKASLASRKKLL----------R 239

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E+ +L+ ++HP LP L     TDKF    +++CPG DLH+LR++Q  + F +  ++F
Sbjct: 240 AQTEKEILQCLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQRGKYFPEQAVKF 299

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           Y AE++LA+EYLH +GI+YRDLKPEN++++E+GHIML DFDLS + +      SP  + +
Sbjct: 300 YVAEILLAMEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA-----VSPTLIRS 354

Query: 193 ANTRSGIKKRRSFLSKFC--------SSGISLEDPVHSPRIGPDPPSRSDSD-------- 236
           +N  +   ++ +    +C        S  I       +   GP   S+S  D        
Sbjct: 355 SNPDAEALRKNN--QAYCVQPACVEPSCMIQPSCATPTTCFGPRFFSKSKKDRKPKPEVV 412

Query: 237 -------------SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP 283
                        S  +S SFVGT EY+APEII+G+GH  AVDWW+ G+ L+E+L+G TP
Sbjct: 413 NQVSPWPELIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 472

Query: 284 FRGSSRKETFYRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKRIGVE----EIKGHEF 336
           F+GS  + T + ++ +P   P+        R+LIR LL K+P +R+G +    EIK H F
Sbjct: 473 FKGSGNRATLFNVIGQPLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPF 532

Query: 337 FKGVNWELLLKISRPPNIPARFEHE 361
           F+GVNW  L++ + PP +P   E E
Sbjct: 533 FEGVNWA-LIRCASPPEVPRPVEIE 556

May play a role in the regulation of metabolism and signal transduction processes.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q05999|KPK7_ARATH Serine/threonine-protein kinase AtPK7 OS=Arabidopsis thaliana GN=PK7 PE=2 SV=1

 Score =  241 bits (614), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/381 (37%), Positives = 207/381 (54%), Gaps = 46/381 (12%)

Query: 5   VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNN 64
           V  R   SL+    +++  LG G  G V+L + + +  SFA+KV+ +  I  + K +   
Sbjct: 169 VRSRVGSSLEAKDFKLIKKLGGGDIGNVYLAELIGTGVSFAVKVMEKAAIAARKKLV--- 225

Query: 65  DNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM 124
                  R   E+ +L++++HP LP L     T+      +++CPG DLHSLR++Q  + 
Sbjct: 226 -------RAQTEKEILQSLDHPFLPTLYSHFETEMNSCLVMEFCPGGDLHSLRQKQRGKY 278

Query: 125 FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
           F +   RFY AE++LA+EYLH +GI+YRDLKPEN++++E+GHIML DFDLS + +     
Sbjct: 279 FPEQAARFYVAEVLLAMEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCA----- 333

Query: 185 ASPKTVLAANTRSGIKKRRSFLSKFC---SSGISLEDPVH----SPRIGPDPPSRSDSD- 236
            SP  V  A      K     +   C   SS I   D +     +PR       R  S+ 
Sbjct: 334 VSPTLVRFAAITLESKSSSYCIQPTCVDQSSCIVQPDCIQPVCFTPRFLSKGKHRKKSND 393

Query: 237 ---------------SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGA 281
                          +S +S SFVGT EY+APEII+G+GH  AVDWW+ G+ L+E+L+G 
Sbjct: 394 MSRQIRPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGI 453

Query: 282 TPFRGSSRKETFYRILCRPPDLVGEPT---PLRNLIRRLLEKDPTKRI----GVEEIKGH 334
           TPFRG   + T + ++ +P      P      R+LIR LL K+P  R+    G  EIK H
Sbjct: 454 TPFRGGDNRATLFNVVGQPLRFPEHPNVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQH 513

Query: 335 EFFKGVNWELLLKISRPPNIP 355
            FF+ VNW  L++ + PP IP
Sbjct: 514 PFFQSVNWA-LIRCTSPPQIP 533

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ST27|PHOT2_ORYSJ Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1

 Score =  236 bits (603), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/340 (41%), Positives = 191/340 (56%), Gaps = 50/340 (14%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  LG G  G V LV+   S E FA+K +       KS  L  N    K  R   E+ + 
Sbjct: 579 VKPLGCGDTGSVHLVELQGSGELFAMKAM------DKSVMLNRN----KVHRACIEREIY 628

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
             ++HP LP L     T   V    D+CPG +L ++  +Q  ++F ++  RFYAAE+V+ 
Sbjct: 629 ALLDHPFLPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIG 688

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           LEYLH +GI+YRDLKPENI++Q +GHI+L DFDLS   + K     P  +      + +K
Sbjct: 689 LEYLHCLGIIYRDLKPENILLQADGHIVLTDFDLSFLTTSK-----PHVI---KNSTSLK 740

Query: 201 KRRS--FLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
           +RRS  FL                      PP+   S+ S  SNSFVGTEEY+APE+I G
Sbjct: 741 RRRSQEFL----------------------PPTFV-SEPSTPSNSFVGTEEYIAPEVITG 777

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---PDLVGEPTPLRNLIR 315
            GH  A+DWW+LG++L+EMLYG TPFRG +RK+TFY IL +    P  +      + LI 
Sbjct: 778 AGHTSAIDWWALGILLYEMLYGRTPFRGKNRKKTFYNILHKDLTFPSSIPVSLAAKQLIH 837

Query: 316 RLLEKDPTKRI----GVEEIKGHEFFKGVNWELLLKISRP 351
            LL++DP+ RI    G  +IK H FF+ +NW L+  +S P
Sbjct: 838 GLLQRDPSNRIGSNAGANDIKQHSFFQDINWPLIRCMSPP 877

Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for phototropic responses. Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	426
255585618	430	serine/threonine protein kinase, putativ	0.950	0.941	0.601	1e-135
224065425	421	predicted protein [Populus trichocarpa]	0.929	0.940	0.610	1e-134
15230825	421	serine/threonine-protein kinase OXI1 [Ar	0.957	0.969	0.583	1e-130
297831428	423	oxidative signal-inducible1 [Arabidopsis	0.946	0.952	0.599	1e-125
15235548	372	AGC (cAMP-dependent, cGMP-dependent and	0.812	0.930	0.633	1e-123
357513223	429	Serine/threonine protein kinase OXI1 [Me	0.859	0.853	0.593	1e-120
449520237	430	PREDICTED: serine/threonine-protein kina	0.906	0.897	0.585	1e-120
356560695	434	PREDICTED: serine/threonine-protein kina	0.950	0.933	0.535	1e-117
356503073	444	PREDICTED: serine/threonine-protein kina	0.899	0.862	0.567	1e-117
297790604	372	kinase family protein [Arabidopsis lyrat	0.814	0.932	0.628	1e-116

>gi|255585618|ref|XP_002533496.1| serine/threonine protein kinase, putative [Ricinus communis] gi|223526640|gb|EEF28883.1| serine/threonine protein kinase, putative [Ricinus communis]

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/434 (60%), Positives = 319/434 (73%), Gaps = 29/434 (6%)

Query: 9   PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
           PI +L+  CL +VSALGRGAKGVVFLVK+  + E +ALKVI RD++EKK++EL+    G+
Sbjct: 10  PILNLEDDCLTVVSALGRGAKGVVFLVKEKTNGELWALKVILRDVVEKKNRELSCT--GN 67

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
           +Y+R+ FE++VL +  HPLLP+LRGVL TDK +GYAID+CPGRDL+ LRKQQSE+MFS D
Sbjct: 68  EYKRVWFEKQVLSHFNHPLLPKLRGVLVTDKIIGYAIDFCPGRDLNHLRKQQSERMFSVD 127

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
            IRFYAAELVLALEYLHN GI YRDLKPENI+IQENGHIMLVDFDLSTK+SP  P+ SP 
Sbjct: 128 IIRFYAAELVLALEYLHNQGIAYRDLKPENILIQENGHIMLVDFDLSTKISP--PKWSPN 185

Query: 189 TVLAANTRSGIKKRRSFLSKF---CSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV 245
           +    +T+     RR   S+F   C+SGIS +D   S   G     + + D++EKSNSFV
Sbjct: 186 SNSPVSTQRKYSSRRKRFSRFHRCCNSGISPDD---SSENGITAVHQKEPDATEKSNSFV 242

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           GTEEYVAPEII+G GH+FAVDWWSLGVVL+EMLYG TPF+GS+RKETF+RIL R PDLVG
Sbjct: 243 GTEEYVAPEIIQGYGHEFAVDWWSLGVVLYEMLYGRTPFKGSNRKETFFRILTRSPDLVG 302

Query: 306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIP-ARFEHENNE 364
           E TPLR+LI +LL KDP +RI VE IKGHEFFKG++W+L+L++SRPP IP A ++   NE
Sbjct: 303 ETTPLRDLIGKLLVKDPRERIKVEGIKGHEFFKGIDWKLILEMSRPPYIPLANYDCRGNE 362

Query: 365 SDGRGRDGTKEIDVEKFVQGIFAG------------GGDAEQKNEVNDEMNKNRGGEKVN 412
               G +G  +IDVE FVQ IF G             GD     EV    +K   G+ +N
Sbjct: 363 ----GTEGKMKIDVESFVQRIFGGEIEKQKVGDRNNNGDGNHDQEVKKIGDKGEWGKGLN 418

Query: 413 NQRHACEEDNFLVF 426
           N  H  E  NFLVF
Sbjct: 419 N--HFQETHNFLVF 430

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065425|ref|XP_002301811.1| predicted protein [Populus trichocarpa] gi|222843537|gb|EEE81084.1| predicted protein [Populus trichocarpa]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/419 (61%), Positives = 316/419 (75%), Gaps = 23/419 (5%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND-NGDKYR 71
           L+   ++++S LGRGAKGVVFLVK+    E +ALKV+ R+ ++KK +   + D  G++YR
Sbjct: 21  LNMESMKVISPLGRGAKGVVFLVKEEPLGEFYALKVVSREFVKKKKRGSNDKDMEGEEYR 80

Query: 72  RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           RI FEQ+V+    HPLLP+LRGVL+TDK + YAIDYCPGRDLH LRKQQSE+MF+ DTIR
Sbjct: 81  RIYFEQQVVSRFNHPLLPKLRGVLATDKILAYAIDYCPGRDLHFLRKQQSEKMFAIDTIR 140

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           FYAAELVLALEYLH +GI YRDLKP+NIM+QENGHIMLVDFDLSTKL PK+  ASP +V+
Sbjct: 141 FYAAELVLALEYLHRLGIAYRDLKPDNIMVQENGHIMLVDFDLSTKLPPKS--ASPVSVV 198

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSR-SDSDSSEKSNSFVGTEEY 250
           A       +KRRS L +F + G+S +D       G +   R S+ DS+ KSNSFVGTEEY
Sbjct: 199 ADR-----RKRRSPLHRFFNRGVSPDDS------GEELGHRLSEPDSTSKSNSFVGTEEY 247

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL 310
           VAPE+I+G GHDF VDWWSLGVVL+EMLYG TPF+G SRKE+FYRIL + PDLVGE TPL
Sbjct: 248 VAPEVIQGDGHDFGVDWWSLGVVLYEMLYGVTPFKGESRKESFYRILTKKPDLVGEATPL 307

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGR 370
           R+LI +LL KDP +RI VE IKGH+FFKG++W+LLL+I RPP IP      +N S+G G+
Sbjct: 308 RDLIGKLLIKDPKERIRVEGIKGHDFFKGIDWDLLLQILRPPYIPFM----DNWSEGEGK 363

Query: 371 DGTKEIDVEKFVQGIFAGGGDAEQKN-EVNDEMNKNRGGEKVN--NQRHACEEDNFLVF 426
           +G KEIDVE FVQ IF  G D ++KN + N   N+N+    VN  N  H CE +NFLVF
Sbjct: 364 NGIKEIDVEIFVQEIFGAGDDDKKKNLDGNHHGNENK-KVWVNGLNTNHPCEAENFLVF 421

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15230825|ref|NP_189162.1| serine/threonine-protein kinase OXI1 [Arabidopsis thaliana] gi|75273965|sp|Q9LSF1.1|OXI1_ARATH RecName: Full=Serine/threonine-protein kinase OXI1; AltName: Full=Protein OXIDATIVE SIGNAL-INDUCIBLE 1 gi|9294182|dbj|BAB02084.1| protein kinases-like protein [Arabidopsis thaliana] gi|119935818|gb|ABM06002.1| At3g25250 [Arabidopsis thaliana] gi|332643479|gb|AEE77000.1| serine/threonine-protein kinase OXI1 [Arabidopsis thaliana]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/430 (58%), Positives = 313/430 (72%), Gaps = 22/430 (5%)

Query: 6   NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
           +++  R+LDF+ L ++S LGRGAKGVVFLV+D + ++  ALKVI ++ IEKK K   + D
Sbjct: 5   DEKQSRALDFNRLEVLSLLGRGAKGVVFLVRD-DDAKLLALKVILKEAIEKKKKGRESED 63

Query: 66  NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
             D+Y+R+SFEQ VL   +HPL P L GVL+TDK +GYAIDYCPG++L+SLRK QSE MF
Sbjct: 64  --DEYKRVSFEQGVLSRFDHPLFPSLHGVLATDKVIGYAIDYCPGQNLNSLRKMQSESMF 121

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
           SD+ IRFYAAELVLAL+YLHN GIVYRDLKP+N+MIQENGH+ML+DFDLST L+P+TPQ 
Sbjct: 122 SDEIIRFYAAELVLALDYLHNQGIVYRDLKPDNVMIQENGHLMLIDFDLSTNLAPRTPQP 181

Query: 186 SPKTVLAANTRSGIKKRRSF-LSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF 244
           SP     + T    +K+R F  + FC+SGIS   P  S  +           S EKSNSF
Sbjct: 182 SPSLSKPSPTMK--RKKRLFRFTSFCNSGIS---PQESISVHSSSTLAVSDSSGEKSNSF 236

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
           VGTEEYVAPE+I G GHDFAVDWWSLGVVL+EMLYGATPFRGS+RKETFYRIL +PP+L 
Sbjct: 237 VGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFYRILSKPPNLT 296

Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNE 364
           GE T LR+LIRRLLEKDP++RI VEEIKGH+FF+GV+WE ++ +SRPP IPA      ++
Sbjct: 297 GETTSLRDLIRRLLEKDPSRRINVEEIKGHDFFRGVDWEKVILVSRPPYIPAP-----DD 351

Query: 365 SDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKN-----EVNDEMNKNRGGEKVN--NQRHA 417
              +G D   ++DVE  VQ IFA   + E+++       N ++  N  GE V   N  H 
Sbjct: 352 GGDKGTDVNTKMDVENIVQEIFAARQEREKQSGDNNKNANMKIKDNTSGEWVKGLNNNHD 411

Query: 418 CEED-NFLVF 426
            E D NFLVF
Sbjct: 412 LESDNNFLVF 421

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831428|ref|XP_002883596.1| oxidative signal-inducible1 [Arabidopsis lyrata subsp. lyrata] gi|297329436|gb|EFH59855.1| oxidative signal-inducible1 [Arabidopsis lyrata subsp. lyrata]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/427 (59%), Positives = 311/427 (72%), Gaps = 24/427 (5%)

Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           R+LDF+ L ++S LGRGAKGVVFLV+D + ++  ALKVI ++ IEKK K+   ++  D+Y
Sbjct: 10  RALDFNRLEVLSLLGRGAKGVVFLVRD-DDAKLLALKVILKEAIEKKKKKARESEE-DEY 67

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           +R+SFEQ VL   +HPL P L GVL+TDK +GYAIDYCPG++L+SLRK QSE MFSDD I
Sbjct: 68  KRVSFEQGVLSRFDHPLFPSLHGVLATDKVIGYAIDYCPGQNLNSLRKMQSESMFSDDII 127

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           RFYAAELVLALEYLHN GIVYRDLKP+N+MIQENGH+ML+DFDLST L+P+TPQ SP   
Sbjct: 128 RFYAAELVLALEYLHNQGIVYRDLKPDNVMIQENGHLMLIDFDLSTNLAPRTPQPSPSPS 187

Query: 191 LA--ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
               A TR   KKR    S FC+SGIS   P  S  I           S EKSNSFVGTE
Sbjct: 188 KPSPATTR---KKRLFRFSSFCNSGIS---PQESISIHSSSTLAVSDSSGEKSNSFVGTE 241

Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           EYVAPE+I G GHDFAVDWWSLGVVL+EMLYG TPFRGS+RKETFYRIL +PP+L GE T
Sbjct: 242 EYVAPEVITGDGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILSKPPNLTGETT 301

Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGR 368
            LR+LIRRLLEKDP++RI VEEIKGH+FFKGV+WE ++ +SRPP IPA      ++   +
Sbjct: 302 SLRDLIRRLLEKDPSRRINVEEIKGHDFFKGVDWEKVILVSRPPYIPAP-----DDGGDK 356

Query: 369 GRDGTKEIDVEKFVQGIFAGGGDAEQK----NEVNDEMNKNRGGEKV----NNQRHACE- 419
           G+D   ++DVE  VQ IFA   + +++    N  N  +  +  GE V    NN  H  E 
Sbjct: 357 GKDVNTKMDVENIVQEIFAAREERDKQSGDNNNANMRIKGDNSGEWVKGLNNNNNHDLES 416

Query: 420 EDNFLVF 426
           E+NFLVF
Sbjct: 417 ENNFLVF 423

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235548|ref|NP_193036.1| AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Arabidopsis thaliana] gi|5123941|emb|CAB45499.1| putative protein [Arabidopsis thaliana] gi|7268002|emb|CAB78342.1| putative protein [Arabidopsis thaliana] gi|26450769|dbj|BAC42493.1| unknown protein [Arabidopsis thaliana] gi|28950941|gb|AAO63394.1| At4g13000 [Arabidopsis thaliana] gi|332657812|gb|AEE83212.1| AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Arabidopsis thaliana]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/382 (63%), Positives = 285/382 (74%), Gaps = 36/382 (9%)

Query: 10  IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           I +L+F  L I SALGRG+KGVVFLVK    ++  ALKVI R+ IE K  +       D+
Sbjct: 12  IPTLNFDHLEIFSALGRGSKGVVFLVK--ADNKWLALKVILRESIESKKAK-------DE 62

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           Y+RISFEQ VL   +HPL PRL GV+STDK +GYAIDYCPGRDL+SLRK+QSE+MFSD+ 
Sbjct: 63  YKRISFEQGVLSRFDHPLFPRLHGVISTDKVIGYAIDYCPGRDLNSLRKKQSEEMFSDEI 122

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           IRFYAAELV+ALEYLHN GIVYRDLKP+N+MIQENGH+MLVDFDLST L P+TPQ+S  +
Sbjct: 123 IRFYAAELVIALEYLHNQGIVYRDLKPDNVMIQENGHLMLVDFDLSTNLPPRTPQSSFSS 182

Query: 190 VLAANTRSGIKKRRSF--LSKFCSSGISLEDPVHSPRIGPDPPSRSDSD--SSEKSNSFV 245
               +T +  KK RS    S  C+SGIS +D V          SRS     S EKSNSFV
Sbjct: 183 SPRLSTAT--KKERSIFAFSGLCNSGISPDDSV----------SRSSESEFSGEKSNSFV 230

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           GTEEYVAPE+I G GHDFAVDWWSLGVVL+EMLYGATPFRGS+RKETF +IL  PP LVG
Sbjct: 231 GTEEYVAPEVITGSGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFLKILTEPPSLVG 290

Query: 306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNES 365
           E T LR+L+R+LLEKDP++RI VE IKGH+FFKG++W+L+LK+SRPP IPA    EN E 
Sbjct: 291 ETTSLRDLVRKLLEKDPSRRINVEGIKGHDFFKGLDWDLVLKVSRPPYIPAP---ENYE- 346

Query: 366 DGRGRDGTKEIDVEKFVQGIFA 387
                    +IDVEKFV  IF 
Sbjct: 347 -------ISKIDVEKFVHEIFT 361

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513223|ref|XP_003626900.1| Serine/threonine protein kinase OXI1 [Medicago truncatula] gi|355520922|gb|AET01376.1| Serine/threonine protein kinase OXI1 [Medicago truncatula]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/394 (59%), Positives = 288/394 (73%), Gaps = 28/394 (7%)

Query: 6   NDRPIRSLDFSCLRIVSALGRGAKGVVFLVK--DVESSESFALKVIWRDLIEKKSKELTN 63
           NDR ++SLDF  L+++SA+GRGAKGVVFL +  +  S E  ALKV+ + LI++K  +  N
Sbjct: 9   NDR-VKSLDFKTLKVISAVGRGAKGVVFLARTGNRSSEEYLALKVMSKALIDQKKSK--N 65

Query: 64  NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
                +Y+R SFEQ VLR+ +HPLLPRLRGV  T+K VG+AIDYC G +LHSLRK+QSE+
Sbjct: 66  PKGCGEYKRASFEQEVLRSFDHPLLPRLRGVFETEKIVGFAIDYCNGGNLHSLRKKQSEK 125

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
           MFSDD IRFYAAE+VLALEYLH++GIVYRDLKP+N+MIQENGHIMLVDFDLSTKL P TP
Sbjct: 126 MFSDDAIRFYAAEMVLALEYLHDLGIVYRDLKPDNVMIQENGHIMLVDFDLSTKLKPITP 185

Query: 184 QASPKTVLAANTRSGIKK-------RRSFLSKF--CSSGISLEDPVHSPRIGPDPPS--R 232
             S    L+ N+ S   K       +    S+F  C+SGIS   P  S  +  D  S  R
Sbjct: 186 PQS----LSHNSSSERSKPSKEKHTKNRLFSRFYRCNSGIS---PCDSDFLPTDSGSFKR 238

Query: 233 SDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET 292
           ++ +S EKS SFVGTEEYVAPEI+ GKGH F VDWWSLGVVL+EMLYG TPF G++RKET
Sbjct: 239 NEPESVEKSKSFVGTEEYVAPEIVNGKGHGFEVDWWSLGVVLYEMLYGTTPFNGTNRKET 298

Query: 293 FYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPP 352
           FYRIL + P+L GE T LR+LIRRLLEKDP +RI V+EIKGH+FFKGV W+ +L+++RPP
Sbjct: 299 FYRILSKEPELTGEKTALRDLIRRLLEKDPDRRIKVDEIKGHDFFKGVKWDTVLELARPP 358

Query: 353 NIPARFEHENNESDGRGRDGTKEIDVEKFVQGIF 386
            IP   E EN  + G  R+      VE FV  +F
Sbjct: 359 YIPPLIEVENENNKGYSRNY-----VEVFVHEVF 387

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520237|ref|XP_004167140.1| PREDICTED: serine/threonine-protein kinase OXI1-like [Cucumis sativus]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 243/415 (58%), Positives = 304/415 (73%), Gaps = 29/415 (6%)

Query: 1   MNDVVNDRP-IRSLDFSCLRIVSALGRGAKGVVFLVKD--VESSESFALKVIWRDLIEKK 57
           MN V + +  I  L F  L +++ALGRGAKGVVFL +D   +  E  ALKVI R+LI++K
Sbjct: 1   MNHVRDQQQEIPQLHFQNLEVLTALGRGAKGVVFLARDPTEDHGEWLALKVISRELIQRK 60

Query: 58  SKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLR 117
           +K + NND G +YRR+ FE+ VLR   HPLLPRL+GVL T K VGYAIDYC GRDL++LR
Sbjct: 61  AK-IVNND-GAEYRRVCFEREVLRLFRHPLLPRLQGVLDTQKVVGYAIDYCNGRDLNALR 118

Query: 118 KQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK 177
           K+Q+E+MFSDD IRFYAAELV+ALEY+H++GIVYRDLKPEN+M+Q NGHIMLVDFDLST+
Sbjct: 119 KKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHNGHIMLVDFDLSTR 178

Query: 178 LSPKTPQASPKTVLAANTRSG--IKKRRSFLSKF----------CSSGISLE--DPVHSP 223
           LS ++P++SP       T S   I+ + S   K           C+SG+S E  D   + 
Sbjct: 179 LSQRSPKSSPSPAAEVLTESKFVIEDKNSKKRKKKKRFFHFHRFCNSGVSPEESDQQATA 238

Query: 224 RIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP 283
              P     S+S+SSEKSNSFVGTE+YVAPEI+ GKGHDFAVDWWSLGVVL+EMLYG TP
Sbjct: 239 TEKPRSEVESESESSEKSNSFVGTEDYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTP 298

Query: 284 FRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
           FRG++RKETFYRIL + PDL GE T LR+LIR LLEKDP KRI VEEIK HEFFKG+ W+
Sbjct: 299 FRGTNRKETFYRILTKTPDLCGEATALRDLIRMLLEKDPGKRIEVEEIKRHEFFKGIEWD 358

Query: 344 LLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEV 398
           ++L+I+RPP++P   E E        R+G K IDVE FV+ +F    + E+KN++
Sbjct: 359 MVLEIARPPSLPEMGEEE--------RNGEKIIDVESFVENVFC--SEIEKKNQI 403

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560695|ref|XP_003548625.1| PREDICTED: serine/threonine-protein kinase OXI1-like [Glycine max]

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/433 (53%), Positives = 295/433 (68%), Gaps = 28/433 (6%)

Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVK--DVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
           + LD   LR+VSA+GRGAKGVVFL +  D  S E  ALKVI + LI +K  +L + +   
Sbjct: 13  KPLDLENLRVVSAVGRGAKGVVFLARTGDRSSEECVALKVISKALIIQKKAKLNDTE--- 69

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
           +Y R+SFE++VLR  +HPLLPRLRGV  TD+ VG+AIDYC G  L SLRK+Q+E+MFSDD
Sbjct: 70  EYTRVSFEEQVLRRFDHPLLPRLRGVFETDRVVGFAIDYCHGGTLRSLRKKQTEKMFSDD 129

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
           TIRFYAAELVLALEYLH +GIVYRDLKP+N+MIQENGHIMLVDFDLS KL+PK P +   
Sbjct: 130 TIRFYAAELVLALEYLHKLGIVYRDLKPDNVMIQENGHIMLVDFDLSKKLNPKFPYSLSH 189

Query: 189 TVLAANTRSGIKKRRSFLS---KFCSSGISLEDPVHSPRIGPDPPSRS-DSDSSEKSNSF 244
              +         RR +L+   KFC+  IS  D    P +     +R  +S+  EKSNSF
Sbjct: 190 NSSSNPNSEKKHTRRHWLTRFYKFCNWVISPYDSDSEPSLNNVNSARHIESNLVEKSNSF 249

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
           VGTEEYVAPEI+ GKGHDF++DWWS G+VL+EMLYG TPF+G++RKETFYRIL + P+L 
Sbjct: 250 VGTEEYVAPEIVSGKGHDFSIDWWSYGIVLYEMLYGTTPFKGANRKETFYRILTKEPELT 309

Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNE 364
           GE T LR+LI +LLEKDP +RI V+EIKGH+FFKGV W+++L+I RPP IP        E
Sbjct: 310 GEKTALRDLIGKLLEKDPDRRIRVDEIKGHDFFKGVKWDMVLRIVRPPYIP--------E 361

Query: 365 SDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEVNDEMNKNRGGE---------KVNNQR 415
           ++ + + G  + DVE FV  +F   GD   + +    + K              KV+   
Sbjct: 362 NEVKNKVGFGKSDVEVFVDKVFFPTGDDGGREKTKMVLEKKDSNNNGENINNMVKVDELS 421

Query: 416 HACEE--DNFLVF 426
           H   E  D+FL+F
Sbjct: 422 HVPTEKIDDFLIF 434

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503073|ref|XP_003520336.1| PREDICTED: serine/threonine-protein kinase OXI1-like [Glycine max]

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/402 (56%), Positives = 284/402 (70%), Gaps = 19/402 (4%)

Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVK--DVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
           + LD   LR+VSA+GRGAKGVVFL +  D  S E  ALKVI + LI +K+K +    N  
Sbjct: 13  KPLDLENLRVVSAVGRGAKGVVFLARTGDRSSEECVALKVIPKALILQKAKLI----NDV 68

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
           +Y R+SFE++VLR  +H LLPRLRGV  T+K VG+ IDYC G  LHSLRK+Q+E+MFSDD
Sbjct: 69  EYTRVSFEEQVLRRFDHLLLPRLRGVFETEKVVGFGIDYCHGGTLHSLRKKQTEKMFSDD 128

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA--- 185
           TIRFYA ELVLALEYLHN+GIVYRDLKPEN+MIQ+NGHIMLVDFDLS KL+PK+P +   
Sbjct: 129 TIRFYAVELVLALEYLHNLGIVYRDLKPENVMIQDNGHIMLVDFDLSKKLNPKSPHSLSQ 188

Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSR-SDSDSSEKSNSF 244
           +      + T+   K+R      FC+SGI   D    P +      R ++SD  EKSNSF
Sbjct: 189 NSSPSPNSKTKQTRKQRLMRFYSFCNSGILPCDSDSEPPLSSVNSVRHTESDLVEKSNSF 248

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
           VGTEEYVAPEI+ GKGH F+VDWWS GVVL+EMLYG TPF+GS+RKETFYRIL + P+L 
Sbjct: 249 VGTEEYVAPEIVSGKGHGFSVDWWSYGVVLYEMLYGTTPFKGSNRKETFYRILMKEPELT 308

Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNE 364
           GE T LR+LI +LLEK+P +RI V EIKGH FFKGV W+ +L I+RPP IP        E
Sbjct: 309 GEKTALRDLIGKLLEKNPDRRIQVNEIKGHNFFKGVKWDTVLHIARPPYIP--------E 360

Query: 365 SDGRGRDGTKEIDVEKFVQGI-FAGGGDAEQKNEVNDEMNKN 405
           ++   + G  + DVE FV  + F  G D  +K +  ++M +N
Sbjct: 361 NEVENKVGFSKSDVEVFVDNVFFPTGDDGGEKTKTLNKMYRN 402

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297790604|ref|XP_002863187.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297309021|gb|EFH39446.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/380 (62%), Positives = 282/380 (74%), Gaps = 33/380 (8%)

Query: 10  IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           I +L+F  L + SALGRG+KGVVFLVK    +E  ALKVI R+ IE K  +       D+
Sbjct: 11  IPTLNFDHLEVFSALGRGSKGVVFLVK--ADNEWLALKVILRESIETKKTK-------DE 61

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           Y+RISFEQ VL   +HPL PRL GVLSTDK VGYAIDYCPGRDL+SLRK+QSE+MFSD+ 
Sbjct: 62  YKRISFEQGVLSRFDHPLFPRLHGVLSTDKVVGYAIDYCPGRDLNSLRKKQSEEMFSDEI 121

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           IRFYAAELV+ALEYLHN GIVYRDLKP+N+MIQENGH+MLVDFDLST L P+TPQ+S   
Sbjct: 122 IRFYAAELVIALEYLHNQGIVYRDLKPDNVMIQENGHLMLVDFDLSTNLPPRTPQSSSS- 180

Query: 190 VLAANTRSGIKKRRSFL--SKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT 247
             +    +  +K RS    S FC+SGIS +D V              S S EKSNSFVGT
Sbjct: 181 --SPRLSTATRKERSLFAFSGFCNSGISPDDSVSR--------ISESSSSGEKSNSFVGT 230

Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
           EEYVAPE+I G GHDFAVDWWSLGVVL+EMLYGATPFRGS+RKETF +IL  PP LVGE 
Sbjct: 231 EEYVAPEVITGSGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFLKILTEPPSLVGET 290

Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDG 367
           T LR+L+R+LLEKDP++RI VE IKGH+FF+G++W+L+LK+SRPP IPA   +E      
Sbjct: 291 TSLRDLVRKLLEKDPSRRINVEGIKGHDFFRGLDWDLVLKVSRPPYIPAPGNYE------ 344

Query: 368 RGRDGTKEIDVEKFVQGIFA 387
                  +IDVEKFV  IFA
Sbjct: 345 -----ISKIDVEKFVHEIFA 359

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	426
TAIR|locus:2090310	421	AGC2-1 [Arabidopsis thaliana (	0.957	0.969	0.541	5e-115
TAIR|locus:2123191	372	AT4G13000 [Arabidopsis thalian	0.737	0.844	0.590	2.5e-97
TAIR|locus:2008331	404	UCN "UNICORN" [Arabidopsis tha	0.769	0.811	0.403	6e-64
TAIR|locus:2091881	408	UCNL "UNICORN-like" [Arabidops	0.800	0.835	0.385	5.5e-61
TAIR|locus:2098120	451	AT3G44610 [Arabidopsis thalian	0.274	0.259	0.472	2.5e-55
TAIR|locus:2207470	555	AGC1.7 "AGC kinase 1.7" [Arabi	0.366	0.281	0.392	2.8e-55
TAIR|locus:2160922	586	D6PKL2 "D6 protein kinase like	0.274	0.199	0.464	8.4e-53
UNIPROTKB|Q5I6E9	700	Adi3 "AvrPto-dependent Pto-int	0.269	0.164	0.495	2e-52
TAIR|locus:2055017	765	AT2G44830 [Arabidopsis thalian	0.274	0.152	0.472	4e-52
TAIR|locus:2133837	506	D6PKL1 "D6 protein kinase like	0.276	0.233	0.452	4.3e-52

TAIR|locus:2090310 AGC2-1 [Arabidopsis thaliana (taxid:3702)]

 Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
 Identities = 233/430 (54%), Positives = 293/430 (68%)

Query:     6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
             +++  R+LDF+ L ++S LGRGAKGVVFLV+D + ++  ALKVI ++ IEKK K   + D
Sbjct:     5 DEKQSRALDFNRLEVLSLLGRGAKGVVFLVRD-DDAKLLALKVILKEAIEKKKKGRESED 63

Query:    66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
               D+Y+R+SFEQ VL   +HPL P L GVL+TDK +GYAIDYCPG++L+SLRK QSE MF
Sbjct:    64 --DEYKRVSFEQGVLSRFDHPLFPSLHGVLATDKVIGYAIDYCPGQNLNSLRKMQSESMF 121

Query:   126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
             SD+ IRF            HN GIVYRDLKP+N+MIQENGH+ML+DFDLST L+P+TPQ 
Sbjct:   122 SDEIIRFYAAELVLALDYLHNQGIVYRDLKPDNVMIQENGHLMLIDFDLSTNLAPRTPQP 181

Query:   186 SPKTVLAANTRSGIKKRRSF-LSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXF 244
             SP     + T    +K+R F  + FC+SGIS   P                        F
Sbjct:   182 SPSLSKPSPTMK--RKKRLFRFTSFCNSGIS---PQESISVHSSSTLAVSDSSGEKSNSF 236

Query:   245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
             VGTEEYVAPE+I G GHDFAVDWWSLGVVL+EMLYGATPFRGS+RKETFYRIL +PP+L 
Sbjct:   237 VGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFYRILSKPPNLT 296

Query:   305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNE 364
             GE T LR+LIRRLLEKDP++RI VEEIKGH+FF+GV+WE ++ +SRPP IPA      ++
Sbjct:   297 GETTSLRDLIRRLLEKDPSRRINVEEIKGHDFFRGVDWEKVILVSRPPYIPAP-----DD 351

Query:   365 SDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKN-----EVNDEMNKNRGGEKVN--NQRHA 417
                +G D   ++DVE  VQ IFA   + E+++       N ++  N  GE V   N  H 
Sbjct:   352 GGDKGTDVNTKMDVENIVQEIFAARQEREKQSGDNNKNANMKIKDNTSGEWVKGLNNNHD 411

Query:   418 CEEDN-FLVF 426
              E DN FLVF
Sbjct:   412 LESDNNFLVF 421

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0019901 "protein kinase binding" evidence=IPI

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2123191 AT4G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
 Identities = 203/344 (59%), Positives = 240/344 (69%)

Query:    45 ALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYA 104
             ALKVI R+ IE K  +       D+Y+RISFEQ VL   +HPL PRL GV+STDK +GYA
Sbjct:    45 ALKVILRESIESKKAK-------DEYKRISFEQGVLSRFDHPLFPRLHGVISTDKVIGYA 97

Query:   105 IDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQEN 164
             IDYCPGRDL+SLRK+QSE+MFSD+ IRF            HN GIVYRDLKP+N+MIQEN
Sbjct:    98 IDYCPGRDLNSLRKKQSEEMFSDEIIRFYAAELVIALEYLHNQGIVYRDLKPDNVMIQEN 157

Query:   165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFL--SKFCSSGISLEDPVHX 222
             GH+MLVDFDLST L P+TPQ+S  +    +T +  KK RS    S  C+SGIS +D V  
Sbjct:   158 GHLMLVDFDLSTNLPPRTPQSSFSSSPRLSTAT--KKERSIFAFSGLCNSGISPDDSV-- 213

Query:   223 XXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGAT 282
                                  FVGTEEYVAPE+I G GHDFAVDWWSLGVVL+EMLYGAT
Sbjct:   214 ------SRSSESEFSGEKSNSFVGTEEYVAPEVITGSGHDFAVDWWSLGVVLYEMLYGAT 267

Query:   283 PFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW 342
             PFRGS+RKETF +IL  PP LVGE T LR+L+R+LLEKDP++RI VE IKGH+FFKG++W
Sbjct:   268 PFRGSNRKETFLKILTEPPSLVGETTSLRDLVRKLLEKDPSRRINVEGIKGHDFFKGLDW 327

Query:   343 ELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIF 386
             +L+LK+SRPP IPA    EN E          +IDVEKFV  IF
Sbjct:   328 DLVLKVSRPPYIPAP---ENYE--------ISKIDVEKFVHEIF 360

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2008331 UCN "UNICORN" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 149/369 (40%), Positives = 205/369 (55%)

Query:     9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSES----FALKVIWRDLIEKKSKELTNN 64
             P  +L+   L+++  LG+GA G VFLV D  S  S    FALK     L++K S      
Sbjct:    13 PATNLNLDRLKVLKLLGKGATGTVFLVHDSVSDSSVSSPFALK-----LVDKSS------ 61

Query:    65 DNGDKYRRISFEQRVLRNVE-----HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQ 119
                   RR  +E ++LR +      +P LP+L     + +F+ +A+ YC G DL+ LR++
Sbjct:    62 --ASSLRRARWEIQILRRLSDDTNPNPFLPKLLASSESSEFIAWALPYCSGGDLNVLRQR 119

Query:   120 QSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
             Q++ +FS   I+F            H MGI YRDLKPENI++QE+GH+ L DFDLS  L+
Sbjct:   120 QNDGVFSSSVIKFYLAEIVCALDHLHTMGIAYRDLKPENILLQESGHVTLTDFDLSCSLN 179

Query:   180 -PKTPQ------ASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXX 232
              P  P+        P     +N     K  R F  K   +  +  +P+            
Sbjct:   180 KPTRPEFYHLSDPEPDPNPESNLSHNKKSLRIFRQKKKKTKSARVNPI--------TRRR 231

Query:   233 XXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET 292
                        FVGT+EY++PE+I G GHDFAVDWW+LGV+ +EM+YG TPF+G ++KET
Sbjct:   232 LSFSGGERSNSFVGTDEYISPEVIRGDGHDFAVDWWALGVLTYEMMYGETPFKGRNKKET 291

Query:   293 FYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIG----VEEIKGHEFFKGVNWELLLKI 348
             F  +L + P+  G+P+ L +LIRRLL KDPTKR G      EIK H FFKGV WELL ++
Sbjct:   292 FRNVLVKEPEFAGKPSDLTDLIRRLLVKDPTKRFGFWRGAAEIKEHAFFKGVRWELLTEV 351

Query:   349 SRPPNIPAR 357
              RPP IP R
Sbjct:   352 LRPPFIPLR 360

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0008134 "transcription factor binding" evidence=IPI

GO:0036290 "protein trans-autophosphorylation" evidence=IDA

GO:0051782 "negative regulation of cell division" evidence=IMP

GO:0080060 "integument development" evidence=IMP

TAIR|locus:2091881 UCNL "UNICORN-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 141/366 (38%), Positives = 195/366 (53%)

Query:     9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
             P   LD   ++ +  LG+GA G VFL  DV S+ S +     + L+ K S          
Sbjct:    12 PPEILDLDSIKALKILGKGATGTVFLAHDVVSTSSSSSPFAVK-LVPKSS--------AS 62

Query:    69 KYRRISFEQRVLRNV-----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
               RR  +E  VLR +     ++P LPRL     + ++  +A+ YC G DL+ L  +Q++ 
Sbjct:    63 SLRRARWEIEVLRRLSVDSNQNPFLPRLLASFESPEYFAWAVPYCSGGDLNVLLHRQNDG 122

Query:   124 MFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS-PKT 182
             +FS   IRF            H MGI YRDLKPENI+IQ++GH+ L DFDLS  L  P  
Sbjct:   123 VFSSSVIRFYVAEIVCALEHLHTMGIAYRDLKPENILIQQSGHVTLTDFDLSRSLKKPLR 182

Query:   183 P---QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXX 239
             P   Q  P+ ++         +  S  ++   +G+                         
Sbjct:   183 PHFYQPDPELIIDRKKSRSFSRLISPTAEKNKTGLK---KTRSARVNPINRRKTSFSSGE 239

Query:   240 XXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
                 FVGT+EYV+PE+I G GHDFAVDWW+LGV+ +EM+YG TPF+G S+KETF  +L +
Sbjct:   240 RSNSFVGTDEYVSPEVIRGDGHDFAVDWWALGVLTYEMMYGETPFKGKSKKETFRNVLMK 299

Query:   300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVE----EIKGHEFFKGVNWELLLKISRPPNIP 355
              P+  G+P  L +LIRRLL KDP +R+G      EIK   FF GV W+LL ++ RPP IP
Sbjct:   300 EPEFAGKPNDLTDLIRRLLVKDPNRRLGCHRGAAEIKELAFFAGVRWDLLTEVLRPPFIP 359

Query:   356 ARFEHE 361
              R + E
Sbjct:   360 LRDDGE 365

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TAIR|locus:2098120 AT3G44610 [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
 Identities = 59/125 (47%), Positives = 81/125 (64%)

Query:   244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             FVGT EY+APEI+ G+GH  AVDWW+LG+ + E+ YG TPF+G   + T   I+ R  + 
Sbjct:   313 FVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGTTPFKGMDHELTLANIVARALEF 372

Query:   304 VGEPT-P--LRNLIRRLLEKDPTKRIG----VEEIKGHEFFKGVNWELLLKISRPPNIPA 356
               EPT P   ++LI +LL KDP++R+G       +K H FF+GVNW LL+  +RPP +P 
Sbjct:   373 PKEPTIPSAAKDLISQLLAKDPSRRLGSSLGATAVKRHPFFQGVNWALLM-CTRPPFLPP 431

Query:   357 RFEHE 361
              F  E
Sbjct:   432 PFRKE 436

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2207470 AGC1.7 "AGC kinase 1.7" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 2.8e-55, Sum P(2) = 2.8e-55
 Identities = 66/168 (39%), Positives = 99/168 (58%)

Query:   244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             FVGT EY+APEII G+GH  AVDWW+ G+ ++E+LYGATPF+G   + T + ++    R 
Sbjct:   380 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFIYELLYGATPFKGQGNRATLHNVIGQALRF 439

Query:   301 PDLVGEPTPLRNLIRRLLEKDPTKRI----GVEEIKGHEFFKGVNWELLLKISRPPNIPA 356
             P++    +  R+LI+ LL K+P KRI    G  EIK H FF+GVNW L+ + + PP++P 
Sbjct:   440 PEVPHVSSAARDLIKGLLVKEPQKRIAYKRGATEIKQHPFFEGVNWALI-RSATPPHVPE 498

Query:   357 RFE---HENNESDGRGR-DGTKEIDVEKFVQGIFAGGGDAEQKNEVND 400
               +   + + + +     DG  + +      G   GGGD +   + ND
Sbjct:   499 PVDFSCYASKDKESMAAVDGGGKKNNNGAGGGCSTGGGDNKPNGDCND 546

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0009860 "pollen tube growth" evidence=IGI;RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

TAIR|locus:2160922 D6PKL2 "D6 protein kinase like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 8.4e-53, Sum P(2) = 8.4e-53
 Identities = 58/125 (46%), Positives = 84/125 (67%)

Query:   244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--- 300
             FVGT EY+APEII+G+GH  AVDWW+ G+ L+E+L+G TPF+GS  ++T + ++ +P   
Sbjct:   427 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRQTLFNVVGQPLRF 486

Query:   301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVE----EIKGHEFFKGVNWELLLKISRPPNIPA 356
             P+        R+LIR LL K+P +R+G +    E+K H FF+GVNW L+ + + PP IP 
Sbjct:   487 PETPVVSFAARDLIRGLLMKEPQQRLGFKRGATEVKQHPFFEGVNWALI-RCATPPEIPK 545

Query:   357 RFEHE 361
               E E
Sbjct:   546 PVELE 550

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

UNIPROTKB|Q5I6E9 Adi3 "AvrPto-dependent Pto-interacting protein 3" [Solanum lycopersicum (taxid:4081)]

 Score = 309 (113.8 bits), Expect = 2.0e-52, Sum P(2) = 2.0e-52
 Identities = 61/123 (49%), Positives = 81/123 (65%)

Query:   244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--- 300
             FVGT EY+APEII+G+GH  AVDWW+ G+ LHE+LYG TPF+GS  + T + ++ +    
Sbjct:   540 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKF 599

Query:   301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVE----EIKGHEFFKGVNWELLLKISRPPNIPA 356
             PD        R+LIR LL K+P  R+GV+    EIK H FF+GVNW L+ + S PP +P 
Sbjct:   600 PDSPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALI-RCSTPPEVPR 658

Query:   357 RFE 359
               E
Sbjct:   659 PVE 661

GO:0005515 "protein binding" evidence=IPI

GO:0043069 "negative regulation of programmed cell death" evidence=IMP

TAIR|locus:2055017 AT2G44830 [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
 Identities = 59/125 (47%), Positives = 82/125 (65%)

Query:   244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             FVGT EY+APEII+G+GH  AVDWW+ G+ +HE+LYG TPF+GS  + T + ++    + 
Sbjct:   597 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFVHELLYGKTPFKGSGNRATLFNVVGEQLKF 656

Query:   301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVE----EIKGHEFFKGVNWELLLKISRPPNIPA 356
             P+        R+LI+ LL KDP  R+G +    EIK H FF+GVNW L+ + S PP +P 
Sbjct:   657 PESPATSYAGRDLIQALLVKDPKNRLGTKRGATEIKQHPFFEGVNWALI-RCSTPPEVPR 715

Query:   357 RFEHE 361
             + E E
Sbjct:   716 QMETE 720

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

TAIR|locus:2133837 D6PKL1 "D6 protein kinase like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 4.3e-52, Sum P(2) = 4.3e-52
 Identities = 57/126 (45%), Positives = 82/126 (65%)

Query:   244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             FVGT EY+APEII+G+GH  AVDWW+ G+ L+E+L+G TPF+GS  + T + ++ +P   
Sbjct:   356 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRF 415

Query:   304 VGEPT---PLRNLIRRLLEKDPTKRI----GVEEIKGHEFFKGVNWELLLKISRPPNIPA 356
                P      R+LIR LL K+P  R+    G  E+K H FF+GVNW L+ + + PP IP 
Sbjct:   416 PESPVVSFAARDLIRSLLVKEPQHRLAYKRGATEMKQHPFFEGVNWALV-RCASPPEIPK 474

Query:   357 RFEHEN 362
               ++E+
Sbjct:   475 PVDYES 480

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LSF1	OXI1_ARATH	2, ., 7, ., 1, 1, ., 1	0.5837	0.9577	0.9691	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.946
3rd Layer	2.7.11	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	426
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-139
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-86
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-75
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-69
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-69
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-65
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-60
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-55
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-55
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-54
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-53
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-53
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-52
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	9e-51
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-50
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-49
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-49
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	7e-49
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	6e-48
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-47
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	6e-47
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-47
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-46
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-46
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	6e-46
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-45
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	8e-44
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-43
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-42
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-41
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	3e-39
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-38
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	5e-38
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	6e-38
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-37
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-37
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-37
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-36
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-36
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	8e-36
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-35
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-35
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-35
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	8e-35
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-35
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-34
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-34
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-33
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-32
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	6e-32
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-31
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-31
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	6e-31
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-30
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-29
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-29
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-29
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-28
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	8e-28
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-27
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-27
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-27
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-27
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-26
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-26
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	9e-26
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-25
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-24
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-24
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-24
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-24
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	8e-24
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-23
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-23
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-23
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	8e-23
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-22
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-22
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-22
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-22
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-22
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-22
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-22
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	5e-21
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	9e-21
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	9e-21
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	3e-20
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-20
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-20
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	6e-20
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-19
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-19
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	8e-19
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-19
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	9e-19
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-18
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-18
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	9e-18
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-17
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-17
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-17
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-17
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	3e-17
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-17
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	4e-17
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-17
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	6e-17
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-17
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	7e-17
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	9e-17
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-16
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-16
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-16
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-16
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-16
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-16
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	4e-16
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-16
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	8e-16
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	9e-16
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-15
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	2e-15
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-15
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-15
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-15
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-15
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	5e-15
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	6e-15
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-14
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-14
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-14
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-14
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-14
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-14
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-14
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-14
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	8e-14
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-14
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	9e-14
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	9e-14
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-13
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-13
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-13
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-13
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-13
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	4e-13
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	4e-13
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	6e-13
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	6e-13
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	6e-13
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	7e-13
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	7e-13
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	7e-13
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	8e-13
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-12
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-12
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-12
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-12
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-12
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	4e-12
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-12
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-12
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	6e-12
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	7e-12
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	7e-12
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	7e-12
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	8e-12
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	9e-12
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-11
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-11
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-11
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	2e-11
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-11
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-11
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-11
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-11
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	5e-11
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-11
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	7e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	8e-11
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	8e-11
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-10
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-10
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-10
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-10
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-10
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-10
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-10
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-10
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	4e-10
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	5e-10
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	5e-10
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	6e-10
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	6e-10
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	8e-10
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	9e-10
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-09
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-09
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-09
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-09
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-09
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	4e-09
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	5e-09
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	5e-09
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	9e-09
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-08
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-08
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-08
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-08
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-08
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	5e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-08
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	8e-08
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-07
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-07
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-07
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-07
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	4e-07
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	6e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-07
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	7e-07
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	7e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	9e-07
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-06
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-06
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-06
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-06
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-06
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	6e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	8e-06
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	9e-06
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	9e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-05
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-05
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	2e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	5e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	5e-05
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	5e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	6e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	6e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	7e-05
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	7e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	8e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	9e-05
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	2e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	4e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	4e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	5e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	5e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-04
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	6e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	7e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	8e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	8e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	9e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	9e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.001
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	0.001
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.001
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.001
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.001
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.001
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.002
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	0.002
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.002
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.002
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.002
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.002
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	0.002
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.002
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.002
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.003
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	0.003
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	0.003
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.003
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.003
pfam10707	199	pfam10707, YrbL-PhoP_reg, PhoP regulatory network	0.003
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.004
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.004

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  400 bits (1031), Expect = e-139
 Identities = 146/347 (42%), Positives = 202/347 (58%), Gaps = 45/347 (12%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
            + +  LG+G  G VFLV+   + + FALKV+ +  + K+          +K +R+  EQ
Sbjct: 3   FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR----------NKVKRVLTEQ 52

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
            +L  ++HP LP L     T+ ++   +DYCPG +L  L ++Q  +  S++  RFYAAE+
Sbjct: 53  EILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEV 112

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
           +LALEYLH +GIVYRDLKPENI++ E+GHIML DFDLS +   + P  S          +
Sbjct: 113 LLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSK---------A 163

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
             K  R                  S        + S+   S +SNSFVGTEEY+APE+I 
Sbjct: 164 LRKGSRR-----------------SSVNSIPSETFSEE-PSFRSNSFVGTEEYIAPEVIS 205

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---PDLVGEPTPLRNLI 314
           G GH  AVDWW+LG++L+EMLYG TPF+GS+R ETF  IL +    P      +  R+LI
Sbjct: 206 GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLI 265

Query: 315 RRLLEKDPTKRI----GVEEIKGHEFFKGVNWELLLKISRPPNIPAR 357
           R+LL KDP+KR+    G  EIK H FF+GVNW  L++ + PP IP  
Sbjct: 266 RKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWA-LIRHTTPPIIPRP 311

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  262 bits (673), Expect = 3e-86
 Identities = 114/318 (35%), Positives = 163/318 (51%), Gaps = 72/318 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G+ G V LV+  ++ + +A+KV+ +  I K+ +                E+ +L  +
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLT----------ERNILSRI 50

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP + +L     T++ +   ++Y PG +L S      E  FS++  RFYAAE+VLALEY
Sbjct: 51  NHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSH--LSKEGRFSEERARFYAAEIVLALEY 108

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH++GI+YRDLKPENI++  +GHI L DF L+ +LS +  + +                 
Sbjct: 109 LHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT---------------- 152

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                FC                                   GT EY+APE++ GKG+  
Sbjct: 153 -----FC-----------------------------------GTPEYLAPEVLLGKGYGK 172

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKDP 322
           AVDWWSLGV+L+EML G  PF    RKE + +IL  P       +P  R+LI  LL+KDP
Sbjct: 173 AVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDP 232

Query: 323 TKRIG---VEEIKGHEFF 337
           TKR+G    EEIK H FF
Sbjct: 233 TKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  235 bits (601), Expect = 3e-75
 Identities = 102/319 (31%), Positives = 154/319 (48%), Gaps = 76/319 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+ G V+L +D ++ +  A+KVI +  I+K  + +              E ++L+ +
Sbjct: 7   LGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILR------------EIKILKKL 54

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + RL  V   +  +   ++YC G DL  L K++     S+D  RFY  +++ ALEY
Sbjct: 55  KHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGR--LSEDEARFYLRQILSALEY 112

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH+ GIV+RDLKPENI++ E+GH+ L DF L+ +L P                       
Sbjct: 113 LHSKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGE--------------------- 151

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
             L+ F                                    GT EY+APE++ GKG+  
Sbjct: 152 -KLTTFV-----------------------------------GTPEYMAPEVLLGKGYGK 175

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-----LRNLIRRLL 318
           AVD WSLGV+L+E+L G  PF G  +    ++ + +P      P        ++LIR+LL
Sbjct: 176 AVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLL 235

Query: 319 EKDPTKRIGVEEIKGHEFF 337
            KDP KR+  EE   H FF
Sbjct: 236 VKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  222 bits (568), Expect = 4e-69
 Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 55/346 (15%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIW-RDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++  +GRGA G V+LV+D ++ + +A+KV+   D+I++                   E+ 
Sbjct: 5   VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRA-----------ERD 53

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIRFYAAE 136
           +L + + P + +L      ++ +   ++Y PG DL +L  RK      F ++T RFY AE
Sbjct: 54  ILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDV----FPEETARFYIAE 109

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           LVLAL+ +H +G ++RD+KP+NI+I  +GHI L DF L  K+                  
Sbjct: 110 LVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKM-------------NKAKD 156

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                  S    F  + +         R+              ++NS VGT +Y+APE++
Sbjct: 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRV--------------RANSTVGTPDYIAPEVL 202

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------LCRPPDLVGEPTPL 310
            G  +    DWWSLGV+L+EMLYG  PF   + +ET+ +I      L  PPD        
Sbjct: 203 RGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPD-PPVSPEA 261

Query: 311 RNLIRRLLEKDPTKRIG-VEEIKGHEFFKGVNWELLLKISRPPNIP 355
            +LI RLL  DP  R+G  EEIK H FFKG++WE L + ++PP +P
Sbjct: 262 IDLICRLL-CDPEDRLGSFEEIKSHPFFKGIDWENLRE-TKPPFVP 305

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  219 bits (560), Expect = 6e-69
 Identities = 105/336 (31%), Positives = 162/336 (48%), Gaps = 69/336 (20%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLI--EKKSKELTNNDNGDKYR 71
           DF   +    +G G+   V L K+ E+++ +A+K++ +  +  EKK K +          
Sbjct: 2   DF---KFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKI-------- 50

Query: 72  RISFEQRVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDT 129
               E+ VL R   HP + +L      ++ + + ++Y P  +L   +RK  S     +  
Sbjct: 51  ----EKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGS---LDEKC 103

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
            RFYAAE++LALEYLH+ GI++RDLKPENI++ ++ HI + DF  +  L P +   S K 
Sbjct: 104 TRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKG 163

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                     K RR                                    +  SFVGT E
Sbjct: 164 DATNIDSQIEKNRR------------------------------------RFASFVGTAE 187

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVG 305
           YV+PE++  K    + D W+LG ++++ML G  PFRGS+   TF +IL      PP+   
Sbjct: 188 YVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNF-- 245

Query: 306 EPTPLRNLIRRLLEKDPTKRIGV----EEIKGHEFF 337
            P   ++LI +LL  DP  R+GV    +E+K H FF
Sbjct: 246 -PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  210 bits (537), Expect = 1e-65
 Identities = 111/326 (34%), Positives = 162/326 (49%), Gaps = 68/326 (20%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWR-DLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
           + +GA G VFL K   + + +A+KVI + D+I K   +           ++  E+ +L  
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVD-----------QVLTERDILSQ 49

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            + P + +L       K +   ++Y PG DL SL +  +     +D  R Y AE+VLALE
Sbjct: 50  AQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLE--NVGSLDEDVARIYIAEIVLALE 107

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH+ GI++RDLKP+NI+I  NGH+ L DF LS                    + G+ +R
Sbjct: 108 YLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLS--------------------KVGLVRR 147

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
           +  L+                            D  ++    VGT +Y+APE+I G+GH 
Sbjct: 148 QINLN----------------------------DDEKEDKRIVGTPDYIAPEVILGQGHS 179

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRLLE 319
             VDWWSLG +L+E L G  PF G + +E F  IL      P+ V       +LI +LL 
Sbjct: 180 KTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLV 239

Query: 320 KDPTKRIG---VEEIKGHEFFKGVNW 342
            DP KR+G   +EEIK H FFKG++W
Sbjct: 240 PDPEKRLGAKSIEEIKNHPFFKGIDW 265

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  197 bits (502), Expect = 2e-60
 Identities = 93/330 (28%), Positives = 142/330 (43%), Gaps = 80/330 (24%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
             ++  LG G+ G V+  K   + +  A+K++ +    +KSK+               E 
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKR--SEKSKKDQTARR---------EI 49

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAE 136
           R+LR + HP + RL         +   ++YC G DL   L +       S+D  +  A +
Sbjct: 50  RILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGP---LSEDEAKKIALQ 106

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           ++  LEYLH+ GI++RDLKPENI++ ENG + + DF L+ KL                  
Sbjct: 107 ILRGLEYLHSNGIIHRDLKPENILLDENGVVKIADFGLAKKLL----------------- 149

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
               K  S L+ F  +                                     Y+APE++
Sbjct: 150 ----KSSSSLTTFVGT-----------------------------------PWYMAPEVL 170

Query: 257 -EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRP-----PDLVGEP 307
             G G+   VD WSLGV+L+E+L G  PF G +     +   RIL  P     P      
Sbjct: 171 LGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGS 230

Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
              ++LI++ L KDP+KR   EEI  H +F
Sbjct: 231 EEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  186 bits (473), Expect = 2e-55
 Identities = 111/349 (31%), Positives = 166/349 (47%), Gaps = 83/349 (23%)

Query: 21  VSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           +  LG+G  G VF V+ V  +++   FA+KV+      KK+  + N  +    +    E+
Sbjct: 1   LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVL------KKATIVRNQKDTAHTKA---ER 51

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
            +L  V+HP +  L     T   +   ++Y  G +L      + E +F +DT  FY +E+
Sbjct: 52  NILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMHLEREGIFMEDTACFYLSEI 109

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
            LALE+LH  GI+YRDLKPENI++   GH+ L DF L                       
Sbjct: 110 SLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGL----------------------- 146

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
                       C   I      H                     +F GT EY+APEI+ 
Sbjct: 147 ------------CKESIHEGTVTH---------------------TFCGTIEYMAPEILM 173

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CR---PPDLVGEPTPLRNL 313
             GH  AVDWWSLG ++++ML GA PF   +RK+T  +IL  +   PP L  E    R+L
Sbjct: 174 RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEA---RDL 230

Query: 314 IRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPA 356
           +++LL+++P+ R+G       E++ H FF+ VNW+ LL +   PP  P 
Sbjct: 231 LKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLARKVEPPFKPL 279

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  184 bits (468), Expect = 3e-55
 Identities = 117/353 (33%), Positives = 171/353 (48%), Gaps = 83/353 (23%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           +F  LR+   LG GA G VFLV+ V   ++ + +A+KV+ +  I +K+K   +       
Sbjct: 1   NFELLRV---LGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRT---- 53

Query: 71  RRISFEQRVLRNVEH-PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
                E++VL  V   P L  L     TD  +   +DY  G +L +   Q+  + F++  
Sbjct: 54  -----ERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQR--EHFTESE 106

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +R Y AE+VLAL++LH +GI+YRD+K ENI++   GH++L DF LS +   +        
Sbjct: 107 VRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE------- 159

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                                      E+  +S                     F GT E
Sbjct: 160 ---------------------------EERAYS---------------------FCGTIE 171

Query: 250 YVAPEIIEGK--GHDFAVDWWSLGVVLHEMLYGATPFRGS----SRKETFYRILCRPPDL 303
           Y+APE+I G   GHD AVDWWSLGV+  E+L GA+PF       S+ E   RIL   P  
Sbjct: 172 YMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPF 231

Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIG---VEEIKGHEFFKGVNWELLLKISRPP 352
               +   R+ I++LLEKDP KR+G    +EIK H FF+G++W+ L     P 
Sbjct: 232 PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDLAAKRIPA 284

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  183 bits (467), Expect = 1e-54
 Identities = 122/358 (34%), Positives = 181/358 (50%), Gaps = 85/358 (23%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           +F  L++   LG GA G VFLV+ V   ++ + +A+KV+ +  + +K+K + +       
Sbjct: 1   NFELLKV---LGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRT---- 53

Query: 71  RRISFEQRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
                E+ VL +V + P L  L     T+  +   +DY  G ++ +   Q+    FS+D 
Sbjct: 54  -----ERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQR--DNFSEDE 106

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +RFY+ E++LALE+LH +GIVYRD+K ENI++   GH++L DF LS              
Sbjct: 107 VRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLS-------------- 152

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                        + FLS                            +  E++ SF GT E
Sbjct: 153 -------------KEFLS----------------------------EEKERTYSFCGTIE 171

Query: 250 YVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPF----RGSSRKETFYRILCRPPDLV 304
           Y+APEII GK GH  AVDWWSLG+++ E+L GA+PF      +++ E   RIL   P   
Sbjct: 172 YMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFP 231

Query: 305 GEPTPL-RNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
               P  ++L+ +LL KDP KR+     G  EIK H FFKG++WE L L+   PP  P
Sbjct: 232 SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRP 289

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  180 bits (459), Expect = 2e-53
 Identities = 113/339 (33%), Positives = 162/339 (47%), Gaps = 75/339 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-RN 82
           +G+G+ G V L K     + +A+KV+ +  I KK ++          + I  E+ VL +N
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQ----------KHIMAERNVLLKN 52

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           V+HP L  L     T   + + +DY  G +L      Q E+ F +   RFYAAE+  AL 
Sbjct: 53  VKHPFLVGLHYSFQTADKLYFVLDYVNGGELFF--HLQRERSFPEPRARFYAAEIASALG 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH++ I+YRDLKPENI++   GH++L DF L                            
Sbjct: 111 YLHSLNIIYRDLKPENILLDSQGHVVLTDFGL---------------------------- 142

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                  C  GI                     + S+ +++F GT EY+APE++  + +D
Sbjct: 143 -------CKEGI---------------------EHSKTTSTFCGTPEYLAPEVLRKQPYD 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT-PLRNLIRRLLEKD 321
             VDWW LG VL+EMLYG  PF      E +  IL +P  L    +   R+L+  LL+KD
Sbjct: 175 RTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKD 234

Query: 322 PTKRIG----VEEIKGHEFFKGVNW-ELLLKISRPPNIP 355
            TKR+G      EIK H FF  +NW +L+ K   PP  P
Sbjct: 235 RTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNP 273

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  178 bits (453), Expect = 2e-53
 Identities = 101/328 (30%), Positives = 151/328 (46%), Gaps = 83/328 (25%)

Query: 26  RGAKGVVFLVKDVESSESFALKVIWR-DLIEKKSKELTNNDNGDKYRRISFEQRVLRN-V 83
           +GA G V+L K   + + FA+KV+ + D+I K   ++TN         +  E+ ++    
Sbjct: 6   KGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKN--QVTN---------VKAERAIMMIQG 54

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           E P + +L     +  ++   ++Y  G D  SL K        +D  + Y AE+VL +E 
Sbjct: 55  ESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVED 112

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH  GI++RD+KPEN++I + GH+ L DF LS                    R+G++ ++
Sbjct: 113 LHQRGIIHRDIKPENLLIDQTGHLKLTDFGLS--------------------RNGLENKK 152

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                                                   FVGT +Y+APE I G G D 
Sbjct: 153 ----------------------------------------FVGTPDYLAPETILGVGDDK 172

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTP-LRNLIRRLL 318
             DWWSLG V+ E L+G  PF   +    F  IL R    P ++    +P   +LI RLL
Sbjct: 173 MSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLL 232

Query: 319 EKDPTKRIG---VEEIKGHEFFKGVNWE 343
             DP KR+G    +EIK H FFK +NW+
Sbjct: 233 CMDPAKRLGANGYQEIKSHPFFKSINWD 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  174 bits (444), Expect = 6e-52
 Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 82/331 (24%)

Query: 15  FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS 74
           F  LR++   G+GA G V +V+  ++ + FA+K + +    +K             R + 
Sbjct: 2   FELLRVI---GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEK----------GSVRNVL 48

Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRF 132
            E+R+L+ + HP L  L      ++ +   +D   G DL  H  +K +    FS++ ++F
Sbjct: 49  NERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVK----FSEEQVKF 104

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           +  E+VLALEYLH+ GI++RD+KP+NI++ E GH+ + DF+++TK++P T          
Sbjct: 105 WICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---------L 155

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
             + SG                                                T  Y+A
Sbjct: 156 TTSTSG------------------------------------------------TPGYMA 167

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET----FYRILCRPPDLVGEPT 308
           PE++  +G+  AVDWWSLGV  +E L G  P+RG SR         +            T
Sbjct: 168 PEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWST 227

Query: 309 PLRNLIRRLLEKDPTKRIG--VEEIKGHEFF 337
              + I +LLE+DP KR+G  ++++K H +F
Sbjct: 228 EAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  173 bits (441), Expect = 9e-51
 Identities = 104/355 (29%), Positives = 161/355 (45%), Gaps = 81/355 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLI-EKKSKELTNNDNGDKYRRISFEQRVLRN 82
           LG+G+ G V L +   + E +A+KV+ +D+I +    E T             E+RVL  
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMT-----------EKRVLAL 51

Query: 83  V-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
             +HP L +L     T   + + ++Y  G DL  +   Q    F +   RFYAAE+VL L
Sbjct: 52  AGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDL--MFHIQRSGRFDEPRARFYAAEIVLGL 109

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           ++LH  GI+YRDLK +N+++   GHI + DF +  +                    G+  
Sbjct: 110 QFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKE----------------GILGGVTT 153

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
                  FC                                   GT +Y+APEI+  + +
Sbjct: 154 S-----TFC-----------------------------------GTPDYIAPEILSYQPY 173

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEK 320
             AVDWW+LGV+L+EML G +PF G    E F  IL              +++++  L K
Sbjct: 174 GPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTK 233

Query: 321 DPTKRIGV-----EEIKGHEFFKGVNWELLL--KISRP--PNIPARFEHENNESD 366
           +P KR+G      ++IKGH FF+ ++W+ L   +I  P  P I  RF+  N + +
Sbjct: 234 NPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDE 288

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  172 bits (437), Expect = 3e-50
 Identities = 100/350 (28%), Positives = 159/350 (45%), Gaps = 85/350 (24%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R ++ LGRG  G V L +  ++ E +A+K +      KK   +      D+   +  E+R
Sbjct: 2   RCLAVLGRGHFGKVLLAEYKKTGELYAIKAL------KKGDIIAR----DEVESLMCEKR 51

Query: 79  VLRNV---EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           +        HP L  L     T+  V + ++Y  G DL  +    ++  FS+    FYAA
Sbjct: 52  IFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDL--MMHIHTDV-FSEPRAVFYAA 108

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
            +VL L+YLH   IVYRDLK +N+++   G + + DF L                     
Sbjct: 109 CVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGL--------------------- 147

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                         C  G+   D                     ++++F GT E++APE+
Sbjct: 148 --------------CKEGMGFGD---------------------RTSTFCGTPEFLAPEV 172

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRN--- 312
           +    +  AVDWW LGV+++EML G +PF G   +E F  I+    D V  P  L     
Sbjct: 173 LTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV---NDEVRYPRFLSREAI 229

Query: 313 -LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
            ++RRLL ++P +R+G      E++K   FF+ +NW+ LL +  +PP +P
Sbjct: 230 SIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVP 279

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score =  170 bits (433), Expect = 1e-49
 Identities = 108/343 (31%), Positives = 161/343 (46%), Gaps = 83/343 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V LV++  + + +A+K++ +++I  K          D+      E RVL+N 
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAK----------DEVAHTLTESRVLQNT 52

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLH-SLRKQQSEQMFSDDTIRFYAAELVLALE 142
            HP L  L+    T   + + ++Y  G +L   L +   E++FS+D  RFY AE+V AL 
Sbjct: 53  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALG 109

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH+  +VYRDLK EN+M+ ++GHI + DF L                            
Sbjct: 110 YLHSCDVVYRDLKLENLMLDKDGHIKITDFGL---------------------------- 141

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                  C  GIS                           +F GT EY+APE++E   + 
Sbjct: 142 -------CKEGISDGA---------------------TMKTFCGTPEYLAPEVLEDNDYG 173

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRLL 318
            AVDWW LGVV++EM+ G  PF     ++ F  IL      P  L  E    ++L+  LL
Sbjct: 174 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEA---KSLLAGLL 230

Query: 319 EKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           +KDP +R+G      +EI  H FF  +NW+ ++ K   PP  P
Sbjct: 231 KKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKP 273

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score =  169 bits (430), Expect = 2e-49
 Identities = 116/361 (32%), Positives = 175/361 (48%), Gaps = 69/361 (19%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  ++++S    GA G V+LV+  E+ + FA+K I      K++  L N     + +++
Sbjct: 2   DFETIKLISN---GAYGAVYLVRHKETRQRFAMKKI-----NKQNLILRN-----QIQQV 48

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
             E+ +L   E+P +  +     T + +   ++Y  G D  +L K         D  R Y
Sbjct: 49  FVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGA--LPVDMARMY 106

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
            AE VLALEYLHN GIV+RDLKP+N++I   GHI L DF LS     K    S  T L  
Sbjct: 107 FAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLS-----KIGLMSLTTNLYE 161

Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP 253
                 K  R FL K                                     GT EY+AP
Sbjct: 162 GHIE--KDTREFLDK----------------------------------QVCGTPEYIAP 185

Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---PDLVGE---P 307
           E+I  +G+   VDWW++G++L+E L G  PF G + +E F +++      P+  G+   P
Sbjct: 186 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE--GDEALP 243

Query: 308 TPLRNLIRRLLEKDPTKRIGV---EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNE 364
              ++LI RLL ++P +R+G     E+K H FF G++W  LL+  +   IP + E E++ 
Sbjct: 244 ADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLR-QKAEFIP-QLESEDDT 301

Query: 365 S 365
           S
Sbjct: 302 S 302

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score =  168 bits (427), Expect = 7e-49
 Identities = 112/353 (31%), Positives = 166/353 (47%), Gaps = 80/353 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-RN 82
           +G+G+ G V L K       +A+KV+ +  I KK ++            I  E+ VL +N
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQ----------NHIMAERNVLLKN 52

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           ++HP L  L     T + + + +DY  G +L      Q E+ F +   RFYAAE+  A+ 
Sbjct: 53  LKHPFLVGLHYSFQTAEKLYFVLDYVNGGEL--FFHLQRERCFLEPRARFYAAEVASAIG 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH++ I+YRDLKPENI++   GH++L DF L                            
Sbjct: 111 YLHSLNIIYRDLKPENILLDSQGHVVLTDFGL---------------------------- 142

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                  C  G+  E                     E +++F GT EY+APE++  + +D
Sbjct: 143 -------CKEGVEPE---------------------ETTSTFCGTPEYLAPEVLRKEPYD 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG-EPTPLRNLIRRLLEKD 321
             VDWW LG VL+EMLYG  PF      + +  IL +P  L G +     +L+  LL KD
Sbjct: 175 RTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKD 234

Query: 322 PTKRIGVE----EIKGHEFFKGVNWELLL--KISRP--PNI--PARFEHENNE 364
             +R+G +    EIK H FF  +NW+ L   +I+ P  PN+  PA   H + E
Sbjct: 235 QRRRLGAKADFLEIKNHVFFSPINWDDLYHKRITPPYNPNVAGPADLRHFDPE 287

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  167 bits (425), Expect = 6e-48
 Identities = 107/351 (30%), Positives = 178/351 (50%), Gaps = 36/351 (10%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  ++++   G+GA G V LV+  ++ + +A+K + +  + KK          D+   +
Sbjct: 2   DFHTVKVI---GKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKK----------DQLAHV 48

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
             E+ VL   + P +  L       +++   +++ PG DL ++  +     FS+D  RFY
Sbjct: 49  KAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFY 106

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
            AE VLA+E +H +G ++RD+KP+NI+I   GHI L DF LST    +   A  + +L  
Sbjct: 107 MAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQG 166

Query: 194 NT-RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
            + ++ I  R S      +  +S +D + + +           +    + S VGT +Y+A
Sbjct: 167 KSNKNRIDNRNSVAVDSINLTMSSKDQIATWK----------KNRRLMAYSTVGTPDYIA 216

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEP 307
           PEI   +G+    DWWSLG ++ E L G  PF   +  ET+ +I+        PD +   
Sbjct: 217 PEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLS 276

Query: 308 TPLRNLIRRLLEKDPTKRIG---VEEIKGHEFFKGVNWELLLKISRPPNIP 355
               +LIRRL+  +   R+G     EIK H FF+GV+W+ + +I R P IP
Sbjct: 277 VEAEDLIRRLI-TNAENRLGRGGAHEIKSHPFFRGVDWDTIRQI-RAPFIP 325

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score =  164 bits (417), Expect = 2e-47
 Identities = 105/335 (31%), Positives = 158/335 (47%), Gaps = 74/335 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-RN 82
           +G+G+ G V L K     + +A+KV+ + ++  + ++          + I  E+ VL +N
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQ----------KHIMAERNVLLKN 52

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           V+HP L  L     T + + + +D+  G +L      Q E+ F +   RFYAAE+  AL 
Sbjct: 53  VKHPFLVGLHYSFQTTEKLYFVLDFVNGGEL--FFHLQRERSFPEPRARFYAAEIASALG 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH++ IVYRDLKPENI++   GH++L DF L                            
Sbjct: 111 YLHSINIVYRDLKPENILLDSQGHVVLTDFGL---------------------------- 142

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                  C  GI+  D                      + +F GT EY+APE+I  + +D
Sbjct: 143 -------CKEGIAQSD---------------------TTTTFCGTPEYLAPEVIRKQPYD 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKD 321
             VDWW LG VL+EMLYG  PF      E +  IL +P  L  G      +++  LLEKD
Sbjct: 175 NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKD 234

Query: 322 PTKRIGVE----EIKGHEFFKGVNWELLLKISRPP 352
             +R+G +    EI+ H FF+ ++W  L +   PP
Sbjct: 235 RQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPP 269

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  164 bits (418), Expect = 6e-47
 Identities = 104/356 (29%), Positives = 174/356 (48%), Gaps = 55/356 (15%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  ++++   GRGA G V LV+  ++   +A+K +      +KS+ L           +
Sbjct: 2   DFESIKVI---GRGAFGEVRLVQKKDTGHIYAMKKL------RKSEMLEKEQVA----HV 48

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
             E+ +L   ++P + +L      + ++   ++Y PG D+ +L  +  +  F+++  RFY
Sbjct: 49  RAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFY 106

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
            AE +LA++ +H +G ++RD+KP+N+++   GHI L DF L T                 
Sbjct: 107 IAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT----------------- 149

Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN------SFVGT 247
               G+KK          S     + +        P S      + K N      S VGT
Sbjct: 150 ----GLKKSHRTEFYRILSHALPSNFLDFIS---KPMSSKRKAETWKRNRRALAYSTVGT 202

Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRP----PD 302
            +Y+APE+    G++   DWWSLGV+++EML G  PF   + +ET+ +I+  +     PD
Sbjct: 203 PDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPD 262

Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI---GVEEIKGHEFFKGVNWELLLKISRPPNIP 355
            V      ++LI+RL   +  +R+   GV EIK H FFKGV+WE + +    P IP
Sbjct: 263 EVPLSPEAKDLIKRLC-CEAERRLGNNGVNEIKSHPFFKGVDWEHIRER-PAPIIP 316

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  161 bits (410), Expect = 6e-47
 Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 71/317 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            I+  +G+G+ G V+LV+     + + LK I          +L+N    ++   ++ E +
Sbjct: 3   EIIKQIGKGSFGKVYLVRRKSDGKLYVLKEI----------DLSNMSEKEREDALN-EVK 51

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--QMFSDDTIRFYAAE 136
           +L+ + HP + +          +   ++Y  G DL    K+Q +  + F ++ I  +  +
Sbjct: 52  ILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQ 111

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           L LAL+YLH+  I++RD+KP+NI +  NG                               
Sbjct: 112 LCLALKYLHSRKILHRDIKPQNIFLTSNGL------------------------------ 141

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
             +K     L  F   GIS                +  S + + + + VGT  Y++PE+ 
Sbjct: 142 --VK-----LGDF---GIS----------------KVLSSTVDLAKTVVGTPYYLSPELC 175

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLI 314
           + K +++  D WSLG VL+E+     PF G +  E   +IL    PP      + LRNL+
Sbjct: 176 QNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLV 235

Query: 315 RRLLEKDPTKRIGVEEI 331
             LL+KDP +R  + +I
Sbjct: 236 SSLLQKDPEERPSIAQI 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score =  161 bits (409), Expect = 4e-46
 Identities = 101/351 (28%), Positives = 161/351 (45%), Gaps = 85/351 (24%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF---E 76
           + S +GRG  G V +V++  + + +A+KV+      KKS  L           +SF   E
Sbjct: 5   VKSLVGRGHFGEVQVVREKATGDIYAMKVM------KKSVLLAQ-------ETVSFFEEE 51

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
           + +L     P +P+L+        +   ++Y PG DL SL  +  +Q F +D  +FY AE
Sbjct: 52  RDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQ-FDEDMAQFYLAE 110

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           LVLA+  +H MG V+RD+KPEN++I   GHI L DF  + +L+      + K V +    
Sbjct: 111 LVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLT------ANKMVNSK--- 161

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                                     P                     VGT +Y+APE++
Sbjct: 162 -------------------------LP---------------------VGTPDYIAPEVL 175

Query: 257 E-----GKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVG 305
                 GKG +    DWWSLGV+ +EM+YG +PF   +  +T+  I+      + P+   
Sbjct: 176 TTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPK 235

Query: 306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPA 356
             +   +LI+ LL     +R+G E +  H FF  ++W   ++ S PP +P 
Sbjct: 236 VSSDFLDLIQSLL-CGQKERLGYEGLCCHPFFSKIDWN-NIRNSLPPFVPT 284

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score =  162 bits (412), Expect = 5e-46
 Identities = 104/376 (27%), Positives = 166/376 (44%), Gaps = 69/376 (18%)

Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
           S    +  +G GA G V LV+ V+++  +A+K +      +K+  L  N        +  
Sbjct: 1   SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTL------RKADVLMRNQAA----HVKA 50

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           E+ +L   ++  + +L         + + +DY PG D+ SL  +    +F +D  RFY A
Sbjct: 51  ERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIA 108

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           EL  A+E +H MG ++RD+KP+NI+I  +GHI L DF L T                   
Sbjct: 109 ELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF----------------- 151

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK--------------- 240
                 R +  SK+   G       H  +   +P          +               
Sbjct: 152 ------RWTHDSKYYQKG------DHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRC 199

Query: 241 -SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--- 296
            ++S VGT  Y+APE++   G+    DWWS+GV+L+EML G  PF   +  ET  ++   
Sbjct: 200 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINW 259

Query: 297 ---LCRPPDLVGEPTPLRNLIRRLLEKDPTKRIG---VEEIKGHEFFKGVNWELLLKISR 350
              L  P           +LI RL       R+G    +EIK H FFKG+++  L++  +
Sbjct: 260 ETTLHIPSQAKLSREAS-DLILRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASLIRRQK 317

Query: 351 PPNIPARFEHENNESD 366
            P IP +  H  + S+
Sbjct: 318 APYIP-KITHPTDTSN 332

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score =  160 bits (407), Expect = 6e-46
 Identities = 105/335 (31%), Positives = 164/335 (48%), Gaps = 77/335 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR-N 82
           LG+G+ G V L +   ++E FA+K + +D++      L ++D          E+RVL   
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKALKKDVV------LEDDDVECTM----VERRVLALA 52

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            EHP L  L     T + + + ++Y  G DL  +   QS   F +   RFYAAE++  L+
Sbjct: 53  WEHPFLTHLFCTFQTKEHLFFVMEYLNGGDL--MFHIQSSGRFDEARARFYAAEIICGLQ 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH  GI+YRDLK +N+++ ++GHI + DF +             K  +    ++     
Sbjct: 111 FLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMC------------KENMNGEGKA----- 153

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
               S FC +              PD                     Y+APEI++G+ ++
Sbjct: 154 ----STFCGT--------------PD---------------------YIAPEILKGQKYN 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLL 318
            +VDWWS GV+L+EML G +PF G    E F  IL   P     +  E     + + +L 
Sbjct: 175 ESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAK---DCLSKLF 231

Query: 319 EKDPTKRIGVE-EIKGHEFFKGVNWELLLKISRPP 352
           E+DPTKR+GV+ +I+ H FF+G++WE L K   PP
Sbjct: 232 ERDPTKRLGVDGDIRQHPFFRGIDWERLEKREIPP 266

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score =  159 bits (402), Expect = 4e-45
 Identities = 106/344 (30%), Positives = 161/344 (46%), Gaps = 85/344 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V LV++  +   +A+K++ +++I  K          D+      E RVL+N 
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTESRVLQNT 52

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            HP L  L+    T   + + ++Y  G +L  H  R    E++F+++  RFY AE+V AL
Sbjct: 53  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSAL 108

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           EYLH+  +VYRD+K EN+M+ ++GHI + DF L                           
Sbjct: 109 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL--------------------------- 141

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
                   C  GIS    +                      +F GT EY+APE++E   +
Sbjct: 142 --------CKEGISDGATM---------------------KTFCGTPEYLAPEVLEDNDY 172

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRL 317
             AVDWW LGVV++EM+ G  PF     +  F  IL      P  L  E    ++L+  L
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA---KSLLAGL 229

Query: 318 LEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 230 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 273

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score =  155 bits (393), Expect = 8e-44
 Identities = 106/329 (32%), Positives = 155/329 (47%), Gaps = 80/329 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V LV++  S + +A+K++ +++I  K          D+      E RVL+N 
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAK----------DEVAHTLTESRVLKNT 52

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP L  L+    T   + + ++Y  G +L        E++FS+D  RFY AE+V AL+Y
Sbjct: 53  RHPFLTSLKYSFQTKDRLCFVMEYVNGGEL--FFHLSRERVFSEDRTRFYGAEIVSALDY 110

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH+  IVYRDLK EN+M+ ++GHI + DF L                             
Sbjct: 111 LHSGKIVYRDLKLENLMLDKDGHIKITDFGL----------------------------- 141

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                 C  GI+                      +    +F GT EY+APE++E   +  
Sbjct: 142 ------CKEGIT---------------------DAATMKTFCGTPEYLAPEVLEDNDYGR 174

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRLLE 319
           AVDWW LGVV++EM+ G  PF     ++ F  IL      P  L  +    ++L+  LL 
Sbjct: 175 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADA---KSLLSGLLI 231

Query: 320 KDPTKRIG-----VEEIKGHEFFKGVNWE 343
           KDP KR+G      +EI  H FF GVNW+
Sbjct: 232 KDPNKRLGGGPDDAKEIMRHSFFTGVNWQ 260

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  154 bits (391), Expect = 2e-43
 Identities = 98/361 (27%), Positives = 159/361 (44%), Gaps = 88/361 (24%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIW-RDLIEKKSKELTNNDNGDKYRRISFE 76
             +   LG G+ G V + K   + E +A+K +  R++++ K  +            ++ E
Sbjct: 20  FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQ-----------HVAQE 68

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAA 135
           + +L  + HP +  +      +  V + +++  G +L + LRK      F +D  +FY A
Sbjct: 69  KSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGR---FPNDVAKFYHA 125

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           ELVLA EYLH+  I+YRDLKP      EN   +L+D     K+                T
Sbjct: 126 ELVLAFEYLHSKDIIYRDLKP------EN---LLLDNKGHVKV----------------T 160

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
             G  K+                                    +++ +  GT EY+APE+
Sbjct: 161 DFGFAKK----------------------------------VPDRTFTLCGTPEYLAPEV 186

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRN 312
           I+ KGH  AVDWW++GV+L+E + G  PF   +    + +IL    + P+        R+
Sbjct: 187 IQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRA--RD 244

Query: 313 LIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDG 367
           L++ LL+ D TKR+     GV ++K H +F G NW+ L     P  IP R     +  D 
Sbjct: 245 LVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRV---KSPGDT 301

Query: 368 R 368
            
Sbjct: 302 S 302

Length = 329

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score =  150 bits (381), Expect = 5e-42
 Identities = 108/343 (31%), Positives = 157/343 (45%), Gaps = 79/343 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G  G V+ V+  ++   +A+KV+ +  I  K KE+ +       R I    R L + 
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAK-KEVAHTIG---ERNIL--VRTLLD- 53

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           E P +  L+    TD  +    DY  G +L      Q E  FS+D  +FY AELVLALE+
Sbjct: 54  ESPFIVGLKFSFQTDSDLYLVTDYMSGGEL--FWHLQKEGRFSEDRAKFYIAELVLALEH 111

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH   IVYRDLKPENI++   GHI L DF LS            K  L  N  +      
Sbjct: 112 LHKYDIVYRDLKPENILLDATGHIALCDFGLS------------KANLTDNKTT------ 153

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI-IEGKGHD 262
              + FC                                   GT EY+APE+ ++ KG+ 
Sbjct: 154 ---NTFC-----------------------------------GTTEYLAPEVLLDEKGYT 175

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGEPTPLRNLIRRL 317
             VD+WSLGV++ EM  G +PF     ++  YR +       P +++ +    R  ++ L
Sbjct: 176 KHVDFWSLGVLVFEMCCGWSPFYAEDTQQ-MYRNIAFGKVRFPKNVLSDEG--RQFVKGL 232

Query: 318 LEKDPTKRIG----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
           L ++P  R+G      E+K H FF  ++W+LL  K   PP  P
Sbjct: 233 LNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKP 275

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score =  148 bits (374), Expect = 3e-41
 Identities = 111/357 (31%), Positives = 165/357 (46%), Gaps = 88/357 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V LVK+  +   +A+K++ +++I  K          D+      E RVL+N 
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNS 52

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            HP L  L+    T   + + ++Y  G +L  H  R    E++FS+D  RFY AE+V AL
Sbjct: 53  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSAL 108

Query: 142 EYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           +YLH+   +VYRDLK EN+M+ ++GHI + DF L                          
Sbjct: 109 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-------------------------- 142

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                    C  GI                            +F GT EY+APE++E   
Sbjct: 143 ---------CKEGIK---------------------DGATMKTFCGTPEYLAPEVLEDND 172

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRL 317
           +  AVDWW LGVV++EM+ G  PF     ++ F  IL    R P  +      ++L+  L
Sbjct: 173 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEA--KSLLSGL 230

Query: 318 LEKDPTKRIG-----VEEIKGHEFFKGVNW-ELLLKISRPPNIPARFEHENNESDGR 368
           L+KDP +R+G      +EI  H+FF G+ W ++  K   PP  P       +E+D R
Sbjct: 231 LKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKP----QVTSETDTR 283

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score =  143 bits (362), Expect = 3e-39
 Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 86/351 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG+   V LV+  ++   +A+KVI         KEL N+D    +  +  E+ V    
Sbjct: 3   IGRGSYAKVLLVELKKTRRIYAMKVI--------KKELVNDDEDIDW--VQTEKHVFETA 52

Query: 84  E-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
             HP L  L     T+  + + I++  G DL  +   Q ++   ++  RFY+AE+ LAL 
Sbjct: 53  SNHPFLVGLHSCFQTESRLFFVIEFVSGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH  GI+YRDLK +N+++   GHI L D+ +                            
Sbjct: 111 FLHERGIIYRDLKLDNVLLDAEGHIKLTDYGM---------------------------- 142

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                  C  GI   D                      +++F GT  Y+APEI+ G+ + 
Sbjct: 143 -------CKEGIRPGD---------------------TTSTFCGTPNYIAPEILRGEDYG 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCRPPDLVGEPTPLR--N 312
           F+VDWW+LGV++ EM+ G +PF   G S       ++  ++++      +     ++  +
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASS 234

Query: 313 LIRRLLEKDPTKRIG------VEEIKGHEFFKGVNWELL-LKISRPPNIPA 356
           +++  L KDP +R+G        +IK H FF+ ++W+LL  K   PP  P 
Sbjct: 235 VLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPN 285

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score =  140 bits (354), Expect = 3e-38
 Identities = 104/346 (30%), Positives = 162/346 (46%), Gaps = 71/346 (20%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR-N 82
           LG+G+ G V L +     E FA+K + +D++      L ++D          E+RVL   
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVV------LIDDD----VECTMVEKRVLALA 52

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            E+P L  L     T + + + +++  G DL  +   Q +  F      FYAAE+V  L+
Sbjct: 53  WENPFLTHLYCTFQTKEHLFFVMEFLNGGDL--MFHIQDKGRFDLYRATFYAAEIVCGLQ 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH+ GI+YRDLK +N+M+  +GHI + DF +             K  +  + R+     
Sbjct: 111 FLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMC------------KENVFGDNRA----- 153

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
               S FC +              PD                     Y+APEI++G  + 
Sbjct: 154 ----STFCGT--------------PD---------------------YIAPEILQGLKYT 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT-PLRNLIRRLLEKD 321
           F+VDWWS GV+L+EML G +PF G    E F  I    P      T   ++++ +L E+D
Sbjct: 175 FSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERD 234

Query: 322 PTKRIGVE-EIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
           PT+R+GV   I+GH FFK +NW  L K    P    + +  ++ S+
Sbjct: 235 PTRRLGVVGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSN 280

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score =  139 bits (352), Expect = 5e-38
 Identities = 97/328 (29%), Positives = 158/328 (48%), Gaps = 77/328 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G+ G VFL +   +++ FA+K + +D++      L ++D          E+RVL   
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKKDVV------LMDDD----VECTMVEKRVLSLA 52

Query: 84  -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            EHP L  L     T + + + ++Y  G DL  +   QS   F      FYAAE++  L+
Sbjct: 53  WEHPFLTHLYCTFQTKENLFFVMEYLNGGDL--MFHIQSCHKFDLPRATFYAAEIICGLQ 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH+ GIVYRDLK +NI++  +GHI + DF +             K  +  + ++     
Sbjct: 111 FLHSKGIVYRDLKLDNILLDTDGHIKIADFGMC------------KENMLGDAKT----- 153

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                 FC +              PD                     Y+APEI+ G+ ++
Sbjct: 154 ----CTFCGT--------------PD---------------------YIAPEILLGQKYN 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLVGEPTPLRNLIRRLL 318
            +VDWWS GV+L+EML G +PF G   +E F  I     C P  L  E    ++++ +L 
Sbjct: 175 TSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREA---KDILVKLF 231

Query: 319 EKDPTKRIGVE-EIKGHEFFKGVNWELL 345
            ++P +R+GV+ +I+ H FF+ ++W  L
Sbjct: 232 VREPERRLGVKGDIRQHPFFREIDWSAL 259

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score =  139 bits (352), Expect = 6e-38
 Identities = 102/359 (28%), Positives = 160/359 (44%), Gaps = 87/359 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR-N 82
           LG+G+ G V L +   + E +A+KV+ +D+I +           D       E+R+L   
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQD----------DDVDCTMTEKRILALA 52

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            +HP L  L     T   + + ++Y  G DL  + + Q  + F +   RFYAAE+ LAL 
Sbjct: 53  AKHPFLTALHCCFQTKDRLFFVMEYVNGGDL--MFQIQRSRKFDEPRSRFYAAEVTLALM 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH  G++YRDLK +NI++   GH  L DF +                            
Sbjct: 111 FLHRHGVIYRDLKLDNILLDAEGHCKLADFGM---------------------------- 142

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                  C  GI                      +   + +F GT +Y+APEI++   + 
Sbjct: 143 -------CKEGIL---------------------NGVTTTTFCGTPDYIAPEILQELEYG 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR----NLIRRLL 318
            +VDWW+LGV+++EM+ G  PF   +  + F  IL    D V  P  L     ++++  +
Sbjct: 175 PSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL---HDDVLYPVWLSKEAVSILKAFM 231

Query: 319 EKDPTKRIGV-------EEIKGHEFFKGVNWELL--LKISRP--PNIPARFEHENNESD 366
            K+P KR+G        + IK H FFK ++W LL   KI  P  P I  + +  N + D
Sbjct: 232 TKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQD 290

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  138 bits (349), Expect = 1e-37
 Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 16/167 (9%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVI-WRDLIEKKSKELTNNDNGDKYRRISFE 76
              +  LG G+ G V LV+   S + +ALK++    +++ K  E   N           E
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLN-----------E 51

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAA 135
           +R+L+++ HP L  L G    D  +   ++Y PG +L S LRK      F +   RFYAA
Sbjct: 52  KRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGR---FPEPVARFYAA 108

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
           ++VLALEYLH++ IVYRDLKPEN+++  +G+I + DF  + ++  +T
Sbjct: 109 QVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT 155

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  136 bits (345), Expect = 1e-37
 Identities = 71/324 (21%), Positives = 132/324 (40%), Gaps = 75/324 (23%)

Query: 17  CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
              I+  +G+G  G V+  +   + +  A+KVI               ++ +K  +I  E
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVI-------------KLESKEKKEKIINE 47

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
            ++L+  +HP + +  G       +   +++C G  L  L K  + Q  ++  I +   E
Sbjct: 48  IQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKS-TNQTLTESQIAYVCKE 106

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           L+  LEYLH+ GI++RD+K  NI++                                 + 
Sbjct: 107 LLKGLEYLHSNGIIHRDIKAANILL--------------------------------TSD 134

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
             +K     L  F   G+S                 +    ++  N+ VGT  ++APE+I
Sbjct: 135 GEVK-----LIDF---GLS-----------------AQLSDTKARNTMVGTPYWMAPEVI 169

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP----DLVGEPTPLRN 312
            GK +D+  D WSLG+   E+  G  P+      +  ++I    P    +        ++
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKD 229

Query: 313 LIRRLLEKDPTKRIGVEEIKGHEF 336
            +++ L+K+P KR   E++  H F
Sbjct: 230 FLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score =  139 bits (350), Expect = 2e-37
 Identities = 104/374 (27%), Positives = 182/374 (48%), Gaps = 73/374 (19%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWR-DLIEKKSKELTNNDNGDKYRR 72
           DF  L+++   GRGA G V LV+  ++   +A+K++ + D++EK           ++   
Sbjct: 2   DFESLKVI---GRGAFGEVRLVQKKDTGHIYAMKILRKADMLEK-----------EQVAH 47

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           I  E+ +L   +   + ++       + +   +++ PG D+ +L  ++     S++  +F
Sbjct: 48  IRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKD--TLSEEATQF 105

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           Y AE VLA++ +H +G ++RD+KP+N+++   GH+ L DF L T                
Sbjct: 106 YIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCT---------------- 149

Query: 193 ANTRSGIKK--RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF------ 244
                G+KK  R  F               H+P   P   S  + +S  K+ ++      
Sbjct: 150 -----GLKKAHRTEFYRNL----------THNP---PSDFSFQNMNSKRKAETWKKNRRQ 191

Query: 245 -----VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
                VGT +Y+APE+    G++   DWWSLGV+++EML G  PF   + +ET+ +++  
Sbjct: 192 LAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNW 251

Query: 300 PPDLVGEP-TPLRNLIRRLLEK---DPTKRIG---VEEIKGHEFFKGVNWELLLKISRPP 352
              LV  P  P+    + L+ +   D   RIG   VEEIK H FF+GV+W  + +  RP 
Sbjct: 252 KETLVFPPEVPISEKAKDLILRFCTDSENRIGSNGVEEIKSHPFFEGVDWGHIRE--RPA 309

Query: 353 NIPARFEHENNESD 366
            IP   +  ++ S+
Sbjct: 310 AIPIEIKSIDDTSN 323

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score =  136 bits (343), Expect = 1e-36
 Identities = 99/363 (27%), Positives = 169/363 (46%), Gaps = 89/363 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG+   V LV+  ++   +A+KV+         KEL N+D    +  +  E+ V    
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVV--------KKELVNDDEDIDW--VQTEKHVFEQA 52

Query: 84  E-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
             HP L  L     T+  + + I+Y  G DL  +   Q ++   ++  RFY+AE+ LAL 
Sbjct: 53  SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH  GI+YRDLK +N+++   GHI L D+ +                            
Sbjct: 111 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM---------------------------- 142

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                  C  G+   D                      +++F GT  Y+APEI+ G+ + 
Sbjct: 143 -------CKEGLRPGD---------------------TTSTFCGTPNYIAPEILRGEDYG 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCRPPDLVGEPTPLR--N 312
           F+VDWW+LGV++ EM+ G +PF   GSS       ++  ++++      +     ++  +
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAAS 234

Query: 313 LIRRLLEKDPTKRIGV------EEIKGHEFFKGVNWELL--LKISRP--PNIPARFEHEN 362
           +++  L KDP +R+G        +I+GH FF+ V+W+L+   ++  P  PNI   F  +N
Sbjct: 235 VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNISGEFGLDN 294

Query: 363 NES 365
            ++
Sbjct: 295 FDA 297

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score =  135 bits (341), Expect = 2e-36
 Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 86/358 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G+ G V L +  ES   +A+KV+ +D+I +           D       E+R+L   
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQD----------DDVECTMTEKRILSLA 52

Query: 84  -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
             HP L +L     T   + + +++  G DL  +   Q  + F +   RFYAAE+  AL 
Sbjct: 53  RNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEITSALM 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH+ GI+YRDLK +N+++   GH  L DF +                     + GI   
Sbjct: 111 FLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM--------------------CKEGIFNG 150

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
           ++  S FC +              PD                     Y+APEI++   + 
Sbjct: 151 KT-TSTFCGT--------------PD---------------------YIAPEILQEMLYG 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR----NLIRRLL 318
            +VDWW++GV+L+EML G  PF   +  + F  IL    D V  PT L     ++++  +
Sbjct: 175 PSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---NDEVVYPTWLSQDAVDILKAFM 231

Query: 319 EKDPTKRIGV------EEIKGHEFFKGVNWELLLK--ISRP--PNIPARFEHENNESD 366
            K+PT R+G       E I  H FFK ++WE L +  I  P  P I +R +  N + D
Sbjct: 232 TKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPD 289

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score =  134 bits (337), Expect = 8e-36
 Identities = 100/386 (25%), Positives = 173/386 (44%), Gaps = 96/386 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG+   V LV+  ++ + +A+KV+         KEL ++D    +  +  E+ V    
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVV--------KKELVHDDEDIDW--VQTEKHVFEQA 52

Query: 84  E-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
             +P L  L     T   +   I+Y  G DL  +   Q ++   ++  RFYAAE+ +AL 
Sbjct: 53  SSNPFLVGLHSCFQTTSRLFLVIEYVNGGDL--MFHMQRQRKLPEEHARFYAAEICIALN 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH  GI+YRDLK +N+++  +GHI L D+ +                            
Sbjct: 111 FLHERGIIYRDLKLDNVLLDADGHIKLTDYGM---------------------------- 142

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                  C  G+           GP           + +++F GT  Y+APEI+ G+ + 
Sbjct: 143 -------CKEGL-----------GP----------GDTTSTFCGTPNYIAPEILRGEEYG 174

Query: 263 FAVDWWSLGVVLHEMLYGATPFR------GSSRKETFYRILCRPPDLVGEPTPLR--NLI 314
           F+VDWW+LGV++ EM+ G +PF         + ++  ++++   P  +     ++  +++
Sbjct: 175 FSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVL 234

Query: 315 RRLLEKDPTKRIGVE------EIKGHEFFKGVNWELL-LKISRPP------------NIP 355
           +  L KDP +R+G +      +IK H FF+ ++W+LL  K   PP            N  
Sbjct: 235 KGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDDYGLENFD 294

Query: 356 ARFEHENNESDGRGRDGTKEIDVEKF 381
            +F  E  +      D  K ID  +F
Sbjct: 295 TQFTSEPVQLTPDDEDVIKRIDQSEF 320

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score =  134 bits (338), Expect = 2e-35
 Identities = 110/369 (29%), Positives = 170/369 (46%), Gaps = 61/369 (16%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  LG GA G V L + V++   +A+K +      KK   L N     +   +  E+ +L
Sbjct: 6   IKTLGIGAFGEVCLARKVDTKALYAMKTL-----RKKDVLLRN-----QVAHVKAERDIL 55

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
              ++  + RL         + + +DY PG D+ SL  +    +F +D  RFY AEL  A
Sbjct: 56  AEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCA 113

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           +E +H MG ++RD+KP+NI+I  +GHI L DF L T                        
Sbjct: 114 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF---------------------- 151

Query: 201 KRRSFLSKFCSSGISL-----------EDPVHSPRIGP--DPPSRSDSDSSEK--SNSFV 245
            R +  SK+  SG  +            DP  + R G    P  R  +   ++  ++S V
Sbjct: 152 -RWTHDSKYYQSGDHVRQDSMDFSNEWGDP-ANCRCGDRLKPLERRAARQHQRCLAHSLV 209

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------LCR 299
           GT  Y+APE++   G+    DWWS+GV+L+EML G  PF   +  ET  ++      L  
Sbjct: 210 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHI 269

Query: 300 PPDLVGEPTPLRNLIRRLLE--KDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPAR 357
           PP     P    +LI +L    +D   + G +EIK H FFK +++   L+    P IP +
Sbjct: 270 PPQAKLSPEA-SDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQSAPYIP-K 327

Query: 358 FEHENNESD 366
             H  + S+
Sbjct: 328 ITHPTDTSN 336

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score =  132 bits (333), Expect = 3e-35
 Identities = 106/363 (29%), Positives = 158/363 (43%), Gaps = 88/363 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF+ L +   LG+G+ G V L +   + E +A+K++ +D+I +           D     
Sbjct: 1   DFNFLMV---LGKGSFGKVMLAERKGTDELYAIKILKKDVIIQD----------DDVECT 47

Query: 74  SFEQRVLRNVEHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
             E+RVL     P  L +L     T   + + ++Y  G DL  +   Q    F +    F
Sbjct: 48  MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGKFKEPHAVF 105

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           YAAE+ + L +LH+ GI+YRDLK +N+M+   GHI + DF +      K      KT   
Sbjct: 106 YAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMC-----KENIFGGKT--- 157

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
             TR+           FC +              PD                     Y+A
Sbjct: 158 --TRT-----------FCGT--------------PD---------------------YIA 169

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLVGEPT 308
           PEII  + +  +VDWW+ GV+L+EML G  PF G    E F  I+      P  L  E  
Sbjct: 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAV 229

Query: 309 PLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL--LKISRP--PNIPARFE 359
              ++ + LL K P KR+G       +I+ H FF+ ++WE L   +I  P  P +  R  
Sbjct: 230 ---SICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRS 286

Query: 360 HEN 362
            EN
Sbjct: 287 AEN 289

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  133 bits (335), Expect = 3e-35
 Identities = 85/340 (25%), Positives = 136/340 (40%), Gaps = 83/340 (24%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           RI+  LG G+ G V+L +D +     ALKV+       K  E  +     +  R   E +
Sbjct: 3   RILRKLGEGSFGEVYLARDRKL---VALKVL------AKKLESKSK----EVERFLREIQ 49

Query: 79  VLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL-RKQQSEQMFSDDTIRFYAAE 136
           +L ++   P + +L      +  +   ++Y  G  L  L +K   +   S+    F  A+
Sbjct: 50  ILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQ 109

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGH-IMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           ++ ALEYLH+ GI++RD+KPENI++  +G  + L+DF L+  L                 
Sbjct: 110 ILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLL----------------- 152

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                                            P   S S      ++ VGT  Y+APE+
Sbjct: 153 ---------------------------------PDPGSTSSIPALPSTSVGTPGYMAPEV 179

Query: 256 IEGKGH---DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPT 308
           + G        + D WSLG+ L+E+L G  PF G        +T   IL  P   +  P 
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239

Query: 309 P----------LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                        +L+++LL KDP  R+       H+   
Sbjct: 240 SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  132 bits (333), Expect = 8e-35
 Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 91/367 (24%)

Query: 5   VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNN 64
           +    +++ DF    ++  +GRGA G V LV+   S + +A+K++ +  + K+S      
Sbjct: 35  ITKLRMKAEDF---DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDS---- 87

Query: 65  DNGDKYRRISF---EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                    +F   E+ ++ +     + +L      DK++   ++Y PG DL +L    S
Sbjct: 88  ---------AFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNL---MS 135

Query: 122 EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK 181
                +   RFY AE+VLAL+ +H+MG ++RD+KP+N         ML+D          
Sbjct: 136 NYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN---------MLLD---------- 176

Query: 182 TPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS 241
                         +SG  K   F       G  +               + D++   + 
Sbjct: 177 --------------KSGHLKLADF-------GTCM---------------KMDANGMVRC 200

Query: 242 NSFVGTEEYVAPEIIEGKGHD----FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI- 296
           ++ VGT +Y++PE+++ +G D       DWWS+GV L+EML G TPF   S   T+ +I 
Sbjct: 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260

Query: 297 -----LCRPPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWEL-LLKI 348
                L  P D +      ++LI   L     +  R GV+EIK H FFK   W    ++ 
Sbjct: 261 DHKNSLTFPDD-IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWTFDNIRE 319

Query: 349 SRPPNIP 355
           +  P +P
Sbjct: 320 TVAPVVP 326

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  129 bits (326), Expect = 9e-35
 Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 81/324 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG+ G V+L  D ++ E  A+K +          EL+  D+ ++   +  E R+L ++
Sbjct: 8   LGRGSFGSVYLALDKDTGELMAVKSV----------ELSG-DSEEELEALEREIRILSSL 56

Query: 84  EHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
           +HP + R  G    ++     I  +Y  G  L SL K+  +    +  IR Y  +++  L
Sbjct: 57  QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGK--LPEPVIRKYTRQILEGL 114

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
            YLH+ GIV+RD+K  NI++  +G                                 +K 
Sbjct: 115 AYLHSNGIVHRDIKGANILVDSDGV--------------------------------VK- 141

Query: 202 RRSFLSKF-CSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
               L+ F C+  +                   D ++ E + S  GT  ++APE+I G+ 
Sbjct: 142 ----LADFGCAKRLG------------------DIETGEGTGSVRGTPYWMAPEVIRGEE 179

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF----YRILCR--PPDLVGEPTP-LRNL 313
           +  A D WSLG  + EM  G  P+   S         Y+I     PP++    +   ++ 
Sbjct: 180 YGRAADIWSLGCTVIEMATGKPPW---SELGNPMAALYKIGSSGEPPEIPEHLSEEAKDF 236

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFF 337
           +R+ L +DP KR   +E+  H F 
Sbjct: 237 LRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score =  132 bits (332), Expect = 1e-34
 Identities = 99/347 (28%), Positives = 164/347 (47%), Gaps = 38/347 (10%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  LG GA G V L   V++   +A+K +       + K++ N +   +   +  E+ +L
Sbjct: 6   IKTLGIGAFGEVCLACKVDTHALYAMKTL-------RKKDVLNRN---QVAHVKAERDIL 55

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
              ++  + +L         + + +DY PG D+ SL  +   ++F +   RFY AEL LA
Sbjct: 56  AEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLA 113

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           +E +H MG ++RD+KP+NI+I  +GHI L DF L T                    S   
Sbjct: 114 IESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFR-------------WTHNSKYY 160

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK----SNSFVGTEEYVAPEII 256
           ++ S + +       L D V + R G    +     + +     ++S VGT  Y+APE++
Sbjct: 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVL 220

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------LCRPPDLVGEPTPL 310
             KG+    DWWS+GV+L EML G  PF   +  ET  ++      L  PP +   P   
Sbjct: 221 LRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEA- 279

Query: 311 RNLIRRLL--EKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIP 355
            +LI +L    ++   R G ++IK H FF  V++   ++    P +P
Sbjct: 280 VDLITKLCCSAEERLGRNGADDIKAHPFFSEVDFSSDIRTQPAPYVP 326

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score =  130 bits (328), Expect = 3e-34
 Identities = 105/363 (28%), Positives = 186/363 (51%), Gaps = 51/363 (14%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWR-DLIEKKSKELTNNDNGDKYRR 72
           DF  L+++   GRGA G V LV+  ++   +A+K++ + D++EK           ++   
Sbjct: 2   DFESLKVI---GRGAFGEVRLVQKKDTGHVYAMKILRKADMLEK-----------EQVGH 47

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLS-TDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSDDTI 130
           I  E+ +L  VE   L  ++   S  DK   Y I ++ PG D+ +L  ++     +++  
Sbjct: 48  IRAERDIL--VEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD--TLTEEET 103

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           +FY AE VLA++ +H +G ++RD+KP+N+++   GH+ L DF L T L     + + +T 
Sbjct: 104 QFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL-----KKAHRTE 158

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
              N    +    +F +            ++S R           +  + + S VGT +Y
Sbjct: 159 FYRNLNHSLPSDFTFQN------------MNSKR----KAETWKRNRRQLAFSTVGTPDY 202

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP-TP 309
           +APE+    G++   DWWSLGV+++EML G  PF   + +ET+ +++     L+  P  P
Sbjct: 203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVP 262

Query: 310 LRNLIRRLLEK---DPTKRI---GVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN 363
           +    + L+ +   +   RI   GVEEIK + FF+GV+WE + +  RP  IP   +  ++
Sbjct: 263 ISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVDWEHIRE--RPAAIPIEIKSIDD 320

Query: 364 ESD 366
            S+
Sbjct: 321 TSN 323

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  123 bits (311), Expect = 4e-33
 Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V+L +D ++ +  A+K+I               D+      +  E  +L+ +
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKII------------KKEDSSSLLEELLREIEILKKL 48

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP + +L GV   +  +   ++YC G  L  L K+  E   S+D I     +++  LEY
Sbjct: 49  NHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKEN-EGKLSEDEILRILLQILEGLEY 107

Query: 144 LHNMGIVYRDLKPENIMIQE-NGHIMLVDFDLSTKLSPKTPQASPK 188
           LH+ GI++RDLKPENI++   NG + L DF LS  L+         
Sbjct: 108 LHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  122 bits (309), Expect = 3e-32
 Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 14/159 (8%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V LVK    + +FALK + +  I +  ++            I  E+ +L   
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQ----------EHIFSEKEILEEC 50

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            HP + +L       K++   ++YC G +L   LR +     F + T RFY A +VLA E
Sbjct: 51  NHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGL---FDEYTARFYIACVVLAFE 107

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK 181
           YLHN GI+YRDLKPEN+++  NG++ LVDF  + KL   
Sbjct: 108 YLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  122 bits (308), Expect = 6e-32
 Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 16/167 (9%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVI-WRDLIEKKSKELTNNDNGDKYRRISFE 76
           L  +  +G G  G V LV+D  S   +ALKV+   ++I  K ++  +N           E
Sbjct: 3   LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHN-----------E 51

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAA 135
           +RVL+ V HP + RL       +F+   ++Y PG +L S LR       FS+ T  FYA+
Sbjct: 52  KRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGR---FSNSTGLFYAS 108

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
           E+V ALEYLH+  IVYRDLKPENI++ + GHI L DF  + KL  +T
Sbjct: 109 EIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score =  122 bits (308), Expect = 1e-31
 Identities = 99/353 (28%), Positives = 156/353 (44%), Gaps = 85/353 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF+ L +   LG+G+ G V L +   + E +A+K++ +D++ +           D     
Sbjct: 1   DFNFLMV---LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQD----------DDVECT 47

Query: 74  SFEQRVLR-NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
             E+RVL  + + P L +L     T   + + ++Y  G DL  + + Q    F +    F
Sbjct: 48  MVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYQIQQVGRFKEPHAVF 105

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           YAAE+ + L +LH+ GI+YRDLK +N+M+   GHI + DF +  +               
Sbjct: 106 YAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE--------------- 150

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
            N   G+  +      FC                                   GT +Y+A
Sbjct: 151 -NMWDGVTTK-----TFC-----------------------------------GTPDYIA 169

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLVGEPT 308
           PEII  + +  +VDWW+ GV+L+EML G  PF G    E F  I+      P  +  E  
Sbjct: 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAV 229

Query: 309 PLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPNIP 355
               + + L+ K P KR+G       +IK H FF+ ++WE L  K  +PP  P
Sbjct: 230 A---ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKP 279

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  120 bits (304), Expect = 3e-31
 Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 13/120 (10%)

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG+  AVDWW+LG++++EML G  PF   +  + + +IL    R P 
Sbjct: 160 GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS 219

Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL--KISRPPNIP 355
                   ++LIR LL+ D TKR+G     V +IK H +F G++W  LL  KI   P IP
Sbjct: 220 FFSP--DAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKI-EAPFIP 276

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score =  120 bits (303), Expect = 6e-31
 Identities = 91/335 (27%), Positives = 146/335 (43%), Gaps = 81/335 (24%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  LG+G+ G V L +   + E +A+K++ +D++ +           D       E+RVL
Sbjct: 5   LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQD----------DDVECTMVEKRVL 54

Query: 81  RNVEHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
              + P  L +L     T   + + ++Y  G DL  +   Q    F +    FYAAE+ +
Sbjct: 55  ALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAEISV 112

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            L +LH  GI+YRDLK +N+M+   GHI + DF +  +                +   G+
Sbjct: 113 GLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE----------------HMVDGV 156

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
             R      FC                                   GT +Y+APEII  +
Sbjct: 157 TTR-----TFC-----------------------------------GTPDYIAPEIIAYQ 176

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLVGEPTPLRNLIR 315
            +  +VDWW+ GV+L+EML G  PF G    E F  I+      P  L  E     ++ +
Sbjct: 177 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAV---SICK 233

Query: 316 RLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL 345
            L+ K P+KR+G       +I+ H FF+ ++W+ L
Sbjct: 234 GLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKL 268

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  116 bits (294), Expect = 3e-30
 Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 85/333 (25%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           L  V  LG+G+ GVV+ V+   + + +ALK I  D  E+  K+L              E 
Sbjct: 3   LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLR------------EL 50

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           + LR+ E P + +  G    +  +   ++Y  G  L  L K+       +  + + A ++
Sbjct: 51  KTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQI 108

Query: 138 VLALEYLHNM-GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           +  L+YLH    I++RD+KP N++I                                N++
Sbjct: 109 LKGLDYLHTKRHIIHRDIKPSNLLI--------------------------------NSK 136

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
             +K     ++ F   GIS                +   ++ ++ N+FVGT  Y++PE I
Sbjct: 137 GEVK-----IADF---GIS----------------KVLENTLDQCNTFVGTVTYMSPERI 172

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP------- 309
           +G+ + +A D WSLG+ L E   G  PF     + +F+ ++     +   P P       
Sbjct: 173 QGESYSYAADIWSLGLTLLECALGKFPFL-PPGQPSFFELMQA---ICDGPPPSLPAEEF 228

Query: 310 ---LRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
               R+ I   L+KDP KR    E+  H F K 
Sbjct: 229 SPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  117 bits (294), Expect = 1e-29
 Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 13/136 (9%)

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK 290
           S+   D  +K+ SF GT EY+APE++  +GH  + DWWS GV++ EML G+ PF+G  RK
Sbjct: 145 SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK 204

Query: 291 ETFYRI----LCRPPDLVGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVN 341
           ET   I    L  P  L  E    ++L+R L +++P  R+G     VEEIK H FF  ++
Sbjct: 205 ETMTMILKAKLGMPQFLSPEA---QSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID 261

Query: 342 WELLLKIS-RPPNIPA 356
           W  L +   +PP  PA
Sbjct: 262 WNKLYRREIKPPFKPA 277

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score =  116 bits (292), Expect = 2e-29
 Identities = 98/364 (26%), Positives = 161/364 (44%), Gaps = 76/364 (20%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L+++   GRGA G V +VK   + + FA+K++ +  + K+++     +        
Sbjct: 2   DFEILKVI---GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFRE-------- 50

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
             E+ VL N ++  +  L      +  +   +DY  G DL +L   + E    +D  RFY
Sbjct: 51  --ERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLL-SKFEDRLPEDMARFY 107

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
            AE+V+A++ +H +  V+RD+KP+NI++  NGHI L DF    KL               
Sbjct: 108 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL--------------- 152

Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP 253
                                 +ED      +    P             ++  E   A 
Sbjct: 153 ----------------------MEDGTVQSSVAVGTP------------DYISPEILQAM 178

Query: 254 EIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR------PPDLVGE 306
           E  +GKG +    DWWSLGV ++EMLYG TPF   S  ET+ +I+        P  +   
Sbjct: 179 E--DGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDV 236

Query: 307 PTPLRNLIRRLL--EKDPTKRIGVEEIKGHEFFKGVNWELLLKISRP--PNIPARFEHEN 362
               ++LIRRL+   +    + G+E+ K H FF G++W+ +     P  P + +  +  N
Sbjct: 237 SEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWDNIRNCEAPYIPEVSSPTDTSN 296

Query: 363 NESD 366
            + D
Sbjct: 297 FDVD 300

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  114 bits (287), Expect = 3e-29
 Identities = 47/119 (39%), Positives = 75/119 (63%), Gaps = 12/119 (10%)

Query: 237 SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK--ETFY 294
           S +K+ +F GT EYVAPEII  KG+DF+VD+WSLG++L+E+L G  PF        E + 
Sbjct: 145 SGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYN 204

Query: 295 RILCRPPDLVGEPTPL----RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWEL 344
            IL +    +  P  +    ++LI++LL ++P +R+G     +++IK H++F G +WE 
Sbjct: 205 DIL-KGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWEG 262

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score =  111 bits (279), Expect = 3e-28
 Identities = 72/320 (22%), Positives = 127/320 (39%), Gaps = 75/320 (23%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           ++  LG+G+ G V+ VK +  ++ +ALK +    + +K +E   N           E R+
Sbjct: 4   VLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVN-----------EIRI 52

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIRFYAAEL 137
           L +V HP +   +        +   ++Y P  DL     ++++  ++  +  I     +L
Sbjct: 53  LASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQL 112

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
           +  L+ LH   I++RDLK  NI++  N  + + D  +S  L              A T+ 
Sbjct: 113 LRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVL----------KKNMAKTQI 162

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
           G                                                T  Y+APE+ +
Sbjct: 163 G------------------------------------------------TPHYMAPEVWK 174

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLI 314
           G+ + +  D WSLG +L+EM   A PF   S ++  Y++  R   PP        L+N I
Sbjct: 175 GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKV-QRGKYPPIPPIYSQDLQNFI 233

Query: 315 RRLLEKDPTKRIGVEEIKGH 334
           R +L+  P  R   ++I   
Sbjct: 234 RSMLQVKPKLRPNCDKILAS 253

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score =  113 bits (283), Expect = 8e-28
 Identities = 93/350 (26%), Positives = 157/350 (44%), Gaps = 84/350 (24%)

Query: 5   VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNN 64
           + D  +++ D+    +V  +GRGA G V LV+   + + +A+K++ +  + K+S      
Sbjct: 35  IRDLRMKAEDY---EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS---- 87

Query: 65  DNGDKYRRISFEQR-VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
                     +E+R ++     P + +L      D+++   ++Y PG DL +L    S  
Sbjct: 88  -------AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNY 137

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
              +   RFY AE+VLAL+ +H+MG ++RD+KP+N+++ ++GH+ L DF    K++    
Sbjct: 138 DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN---- 193

Query: 184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS 243
                       + G+ +        C + +   D                         
Sbjct: 194 ------------KEGMVR--------CDTAVGTPD------------------------- 208

Query: 244 FVGTEEYVAPEIIEGKGHD----FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
                 Y++PE+++ +G D       DWWS+GV L+EML G TPF   S   T+ +I+  
Sbjct: 209 ------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 262

Query: 300 P-----PDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNW 342
                 PD        +NLI   L     +  R GVEEIK H FFK   W
Sbjct: 263 KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW 312

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  110 bits (277), Expect = 3e-27
 Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 15/177 (8%)

Query: 239 EKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF----- 293
             +NS VG+ +Y+APE++ GKG+DF VD+WSLG +L+E L G  PF GS+  ET+     
Sbjct: 153 TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY 212

Query: 294 YRILCRPPDLVGEPTPLRN----LIRRLLEKDPTKRIG-VEEIKGHEFFKGVNWELLLKI 348
           ++   + P        L +    LI +L+  DP++R G +E+IK H FFK V+W  L + 
Sbjct: 213 WKETLQRPVYDDPRFNLSDEAWDLITKLIN-DPSRRFGSLEDIKNHPFFKEVDWNELRE- 270

Query: 349 SRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEVNDEMNKN 405
            +PP +P   E E+    G   D   E D+ K+           +      D  N+ 
Sbjct: 271 LKPPFVP---ELESEIDTGYFDDFENEDDMAKYKDVHEKKKAAGKGGANGRDPGNRR 324

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  108 bits (272), Expect = 4e-27
 Identities = 71/317 (22%), Positives = 126/317 (39%), Gaps = 71/317 (22%)

Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +GRGA GVV+   ++E+ +  A+K I           L         + I  E  +L+N
Sbjct: 7   LIGRGAFGVVYKGLNLETGDFVAIKQI----------SLEKIKEEA-LKSIMQEIDLLKN 55

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           ++HP + +  G + T   +   ++Y     L  + K+     F +  +  Y  +++  L 
Sbjct: 56  LKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGP--FPESLVAVYVYQVLQGLA 113

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH  G+++RD+K  NI+  ++G + L DF ++TKL+                       
Sbjct: 114 YLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLN----------------------- 150

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                            V +P                          ++APE+IE  G  
Sbjct: 151 --------DVSKDDASVVGTPY-------------------------WMAPEVIEMSGAS 177

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEK 320
            A D WSLG  + E+L G  P+   +     +RI+    PP   G    L++ + +  +K
Sbjct: 178 TASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQK 237

Query: 321 DPTKRIGVEEIKGHEFF 337
           DP  R   +++  H + 
Sbjct: 238 DPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  109 bits (274), Expect = 6e-27
 Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 16/155 (10%)

Query: 24  LGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           LG+G+ G VFLV+ +   ++   +A+KV+       K   L   D      R   E+ +L
Sbjct: 4   LGQGSFGKVFLVRKITGPDAGQLYAMKVL-------KKATLKVRDR----VRTKMERDIL 52

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
             V HP + +L     T+  +   +D+  G DL +  +   E MF+++ ++FY AEL LA
Sbjct: 53  AEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT--RLSKEVMFTEEDVKFYLAELALA 110

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           L++LH++GI+YRDLKPENI++ E GHI L DF LS
Sbjct: 111 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 145

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  108 bits (271), Expect = 6e-27
 Identities = 89/328 (27%), Positives = 132/328 (40%), Gaps = 87/328 (26%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G  G V+   ++++ E  A+K I    I+    +          + I+ E +VL  +
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEI---RIQDNDPKT--------IKEIADEMKVLELL 56

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLALE 142
           +HP L +  GV    + V   ++YC G  L   L   +         IR Y  +L+  L 
Sbjct: 57  KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDE---HVIRVYTLQLLEGLA 113

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH+ GIV+RD+KP NI +  NG I L DF  + KL       +  T +           
Sbjct: 114 YLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK------NNTTTMG---------- 157

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII---EGK 259
                                               E+  S  GT  Y+APE+I   +GK
Sbjct: 158 ------------------------------------EEVQSLAGTPAYMAPEVITGGKGK 181

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGEPTPL---- 310
           GH  A D WSLG V+ EM  G  P+   S  +  ++I+        P +   P  L    
Sbjct: 182 GHGRAADIWSLGCVVLEMATGKRPW---SELDNEFQIMFHVGAGHKPPI---PDSLQLSP 235

Query: 311 --RNLIRRLLEKDPTKRIGVEEIKGHEF 336
             ++ + R LE DP KR    E+  H F
Sbjct: 236 EGKDFLDRCLESDPKKRPTASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score =  110 bits (275), Expect = 1e-26
 Identities = 94/332 (28%), Positives = 149/332 (44%), Gaps = 75/332 (22%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR- 78
           +V  +GRGA G V LV+   S + +A+K++ +  + K+S                +E+R 
Sbjct: 47  VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDS-----------AFFWEERD 95

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           ++     P + +L      DK++   ++Y PG DL +L    S     +   +FY AE+V
Sbjct: 96  IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL---MSNYDVPEKWAKFYTAEVV 152

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
           LAL+ +H+MG+++RD+KP+N+++ ++GH+ L DF    K+                  +G
Sbjct: 153 LALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD----------------ETG 196

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
           + +        C + +   D + SP +            S+  + + G E          
Sbjct: 197 MVR--------CDTAVGTPDYI-SPEV----------LKSQGGDGYYGRE---------- 227

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------LCRPPDLVGEPTPLRN 312
                  DWWS+GV L EML G TPF   S   T+ +I      L  P D V      +N
Sbjct: 228 ------CDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED-VEISKHAKN 280

Query: 313 LIRRLLEKDPTK--RIGVEEIKGHEFFKGVNW 342
           LI   L     +  R GVEEIK H FFK   W
Sbjct: 281 LICAFLTDREVRLGRNGVEEIKQHPFFKNDQW 312

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score =  107 bits (268), Expect = 2e-26
 Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 13/134 (9%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPF----RGSS 288
            D  E++ SF GT EY+AP+I+ G   GHD AVDWWS+GV+++E+L GA+PF      +S
Sbjct: 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS 216

Query: 289 RKETFYRILCRPPDLVGEPTPL-RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNW 342
           + E   RIL   P    E + L +++I+RLL KDP KR+G      +EIK H FF+ +NW
Sbjct: 217 QAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW 276

Query: 343 E-LLLKISRPPNIP 355
           + L  K    P  P
Sbjct: 277 DDLAAKKVPAPFKP 290

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  106 bits (265), Expect = 9e-26
 Identities = 55/126 (43%), Positives = 80/126 (63%), Gaps = 9/126 (7%)

Query: 238 SEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
            +K+N+F GT EY+APE++ G G+  AVDWW+LGV+L+EML G  PF   +  E + +IL
Sbjct: 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL 206

Query: 298 CRP---PDLVGEPTPLRNLIRRLLEKDPTKRIGV---EEIKGHEFFKGVNW-ELLLKISR 350
             P   PD        ++L+  LL +DPT+R+G    +EIK H FF  ++W +LL+K  +
Sbjct: 207 QEPLRFPDGFDRDA--KDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKLLMKGIQ 264

Query: 351 PPNIPA 356
           PP  PA
Sbjct: 265 PPFKPA 270

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score =  105 bits (263), Expect = 1e-25
 Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 76/321 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDN-GDKYRRISFEQRVLRN 82
           +GRGA G V+  K V +    ALK+I  D         T +D+  D  R ++   + LR 
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKIINLD---------TPDDDVSDIQREVALLSQ-LRQ 58

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLAL 141
            + P + +  G       +   ++Y  G  + +L K     + +    IR    E+++AL
Sbjct: 59  SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIR----EVLVAL 114

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           +Y+H +G+++RD+K  NI++   G++ L DF ++  L               N  S    
Sbjct: 115 KYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALL---------------NQNSS--- 156

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII-EGKG 260
           +RS                                      +FVGT  ++APE+I EGK 
Sbjct: 157 KRS--------------------------------------TFVGTPYWMAPEVITEGKY 178

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPPDLVGE--PTPLRNLIRRL 317
           +D   D WSLG+ ++EM  G  P+           I   +PP L        LR  +   
Sbjct: 179 YDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC 238

Query: 318 LEKDPTKRIGVEEIKGHEFFK 338
           L+++P +R+  EE+   ++ K
Sbjct: 239 LDEEPKERLSAEELLKSKWIK 259

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  102 bits (257), Expect = 1e-24
 Identities = 81/357 (22%), Positives = 134/357 (37%), Gaps = 112/357 (31%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG--DKYRRISFE 76
           +I+  +G GA G+VF  KD E+ E+ ALK +           L   + G  ++  R   E
Sbjct: 3   KILGRIGEGAHGIVFKAKDRETGETVALKKV----------ALRRLEGGIPNQALR---E 49

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
            + L+  +HP + +L  V          ++Y P  DL  + +   E+   +  ++ Y   
Sbjct: 50  IKALQACQHPYVVKLLDVFPHGSGFVLVMEYMP-SDLSEVLRD-EERPLPEAQVKSYMRM 107

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           L+  + Y+H  GI++RDLKP N++I  +G + + DF L+   S +               
Sbjct: 108 LLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEE--------------- 152

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                               E  ++S +                    V T  Y APE++
Sbjct: 153 --------------------EPRLYSHQ--------------------VATRWYRAPELL 172

Query: 257 EGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT------- 308
            G    D  VD W++G +  E+L G+  F G +  E     L      +G P        
Sbjct: 173 YGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ----LAIVFRTLGTPNEETWPGL 228

Query: 309 -----------------PLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFF 337
                            PL            +L++ LL  DP+KR+   E   H +F
Sbjct: 229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  101 bits (254), Expect = 1e-24
 Identities = 74/333 (22%), Positives = 119/333 (35%), Gaps = 80/333 (24%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           L  +  LG G  GVV  V    + +  A+K I  ++ E   K            +I  E 
Sbjct: 3   LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQK------------QILREL 50

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
            +L     P +    G    +  +   ++Y  G  L  + K+  +    +  +   A  +
Sbjct: 51  DILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKE-VQGRIPERILGKIAVAV 109

Query: 138 VLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           +  L YLH    I++RD+KP NI++   G I                             
Sbjct: 110 LKGLTYLHEKHKIIHRDVKPSNILVNSRGQI----------------------------- 140

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                      K C  G+S +  V+S                  + +FVGT  Y+APE I
Sbjct: 141 -----------KLCDFGVSGQ-LVNS-----------------LAKTFVGTSSYMAPERI 171

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRILCR-----PPDLVGEP--T 308
           +G  +    D WSLG+ L E+  G  P+       +  + +L       PP L       
Sbjct: 172 QGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSP 231

Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
             ++ +   L KDP +R   +E+  H F K   
Sbjct: 232 DFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE 264

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  102 bits (255), Expect = 3e-24
 Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 12/157 (7%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I++ +G+G  G VFL K  ++ E  ALK + + L+ K           ++ R +  E+ +
Sbjct: 5   ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKL----------NEVRHVLTERDI 54

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L   +   L +L      D+++  A++Y PG D  +L    +  + S+D  RFY AE+  
Sbjct: 55  LTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTL--LNNLGVLSEDHARFYMAEMFE 112

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
           A++ LH +G ++RDLKPEN +I  +GHI L DF LS 
Sbjct: 113 AVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSK 149

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score =   99 bits (249), Expect = 5e-24
 Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 75/319 (23%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  +GRGA G+V L +     +   +K I  + + K  +    N           E +VL
Sbjct: 5   IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQN-----------ECQVL 53

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + + HP +         DK +   ++Y PG  L    +++   +  +DTI  +  +++LA
Sbjct: 54  KLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLA 113

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLV---DFDLSTKLSPKTPQASPKTVLAANTRS 197
           L ++H   I++RDLK +NI++  + H M+V   DF                         
Sbjct: 114 LHHVHTKLILHRDLKTQNILL--DKHKMVVKIGDF------------------------- 146

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
           GI K  S                                S  K+ + VGT  Y++PE+ E
Sbjct: 147 GISKILS--------------------------------SKSKAYTVVGTPCYISPELCE 174

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE--PTPLRNLIR 315
           GK ++   D W+LG VL+E+      F  ++      +I+      + +     LR LI 
Sbjct: 175 GKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLIL 234

Query: 316 RLLEKDPTKRIGVEEIKGH 334
            +L  DP+KR  + +I   
Sbjct: 235 SMLNLDPSKRPQLSQIMAQ 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  100 bits (250), Expect = 8e-24
 Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 17/122 (13%)

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC------R 299
           GT EY+APE+I+ KGH+ AVDWW+LG++++EML G  PF   +    + +IL       R
Sbjct: 160 GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR 219

Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPN 353
             DL       ++LI++LL  D T+R+     G +++K H +FK V+W+ + +   +PP 
Sbjct: 220 HLDLY-----AKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPI 274

Query: 354 IP 355
           +P
Sbjct: 275 VP 276

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 99.1 bits (247), Expect = 1e-23
 Identities = 81/317 (25%), Positives = 132/317 (41%), Gaps = 66/317 (20%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA G V+L  DV++    A+K +     +  S E     N      +  E ++L+N+
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQV---PFDPDSPETKKEVNA-----LECEIQLLKNL 61

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +H  + +  G L  D+ +   ++Y PG  +    K       ++   R Y  +++  +EY
Sbjct: 62  QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEY 119

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH+  IV+RD+K  NI+    G++ L DF                         G  KR 
Sbjct: 120 LHSNMIVHRDIKGANILRDSAGNVKLGDF-------------------------GASKR- 153

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
             L   CSSG  ++                         S  GT  +++PE+I G+G+  
Sbjct: 154 --LQTICSSGTGMK-------------------------SVTGTPYWMSPEVISGEGYGR 186

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTP-LRNLIRRLLEK 320
             D WS+G  + EML    P+         ++I  +P  P L    +P  RN +RR   +
Sbjct: 187 KADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVE 246

Query: 321 DPTKRIGVEEIKGHEFF 337
           +  KR   EE+  H F 
Sbjct: 247 NAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 99.7 bits (249), Expect = 1e-23
 Identities = 80/350 (22%), Positives = 129/350 (36%), Gaps = 101/350 (28%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
            +  +G G  GVV+  +D  + E  A+K I       K +  +        R I    ++
Sbjct: 3   KLGKIGEGTYGVVYKARDKLTGEIVAIKKI-------KLRFESEGIPKTALREI----KL 51

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L+ + HP + +L  V      +    ++        ++ +Q      +  I+ Y  +L+ 
Sbjct: 52  LKELNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRG--LPESLIKSYLYQLLQ 109

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            L + H+ GI++RDLKPEN++I   G + L DF L+                        
Sbjct: 110 GLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLA------------------------ 145

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG- 258
              RSF                        P R  +        +V T  Y APE++ G 
Sbjct: 146 ---RSF----------------------GSPVRPYTH-------YVVTRWYRAPELLLGD 173

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----------------LCRP- 300
           KG+   VD WS+G +  E+L     F G S  +  ++I                 L R  
Sbjct: 174 KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233

Query: 301 ----PDLVGEPTPL---------RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
               P   G P P           +L+ ++L  DP KRI  E+   H +F
Sbjct: 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 99.7 bits (248), Expect = 2e-23
 Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 11/135 (8%)

Query: 241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP 300
           +++F GT EY+APE++  + +D  VDWW LG VL+EMLYG  PF   +  E +  IL +P
Sbjct: 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP 212

Query: 301 PDLVGEPT-PLRNLIRRLLEKDPTKRIGVE----EIKGHEFFKGVNWELLL--KISRP-- 351
             L    T   R+L+  LL+KD TKR+G +    EIK H FF  +NW+ L+  KI+ P  
Sbjct: 213 LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKITPPFN 272

Query: 352 PNI--PARFEHENNE 364
           PN+  P    H + E
Sbjct: 273 PNVSGPNDLRHFDPE 287

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 96.9 bits (242), Expect = 8e-23
 Identities = 82/318 (25%), Positives = 128/318 (40%), Gaps = 74/318 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G+ G V+   D  +++  A+KVI  DL E+   E+ +         I  E + L   
Sbjct: 9   IGKGSFGEVYKAIDKRTNQVVAIKVI--DL-EEAEDEIED---------IQQEIQFLSQC 56

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
             P + +  G       +   ++YC G     L K        +  I F   E++L LEY
Sbjct: 57  RSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK---PGKLDETYIAFILREVLLGLEY 113

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH  G ++RD+K  NI++ E G + L DF +S +L+                 S + KR 
Sbjct: 114 LHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLT-----------------STMSKR- 155

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                                                 N+FVGT  ++APE+I+  G+D 
Sbjct: 156 --------------------------------------NTFVGTPFWMAPEVIKQSGYDE 177

Query: 264 AVDWWSLGVVLHEMLYGATPFRG-SSRKETFYRILCRPPDLVGEP--TPLRNLIRRLLEK 320
             D WSLG+   E+  G  P       +  F      PP L G     P ++ +   L K
Sbjct: 178 KADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNK 237

Query: 321 DPTKRIGVEEIKGHEFFK 338
           DP +R   +E+  H+F K
Sbjct: 238 DPKERPSAKELLKHKFIK 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 97.4 bits (242), Expect = 1e-22
 Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 13/152 (8%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-RN 82
           +G+G+ G V L +     + +A+KV+ +  I KK +E          + I  E+ VL +N
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEE----------KHIMSERNVLLKN 52

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           V+HP L  L     T   + + +DY  G +L      Q E+ F +   RFYAAE+  AL 
Sbjct: 53  VKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALG 110

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
           YLH++ IVYRDLKPENI++   GHI+L DF L
Sbjct: 111 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 142

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 96.8 bits (241), Expect = 1e-22
 Identities = 86/347 (24%), Positives = 143/347 (41%), Gaps = 83/347 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V   +   + + +A K + +  ++K+            Y     E+R+L  V
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKG----------YEGAMVEKRILAKV 50

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFYAAELVLAL 141
               +  L     T   +   +    G DL  H     +    F +    FY A+++  L
Sbjct: 51  HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGL 110

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           E+LH   I+YRDLKP      EN   +L+D D + ++S                      
Sbjct: 111 EHLHQRRIIYRDLKP------EN---VLLDNDGNVRIS---------------------- 139

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
                      G+++E                  D   K+  + GT  ++APE+++G+ +
Sbjct: 140 ---------DLGLAVEL----------------KDGQSKTKGYAGTPGFMAPELLQGEEY 174

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGS----SRKETFYRILCRP---PDLVGEPTPLRNLI 314
           DF+VD+++LGV L+EM+    PFR        KE   RIL      PD     +  ++  
Sbjct: 175 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPAS--KSFC 232

Query: 315 RRLLEKDPTKRIG-----VEEIKGHEFFKGVNW-ELLLKISRPPNIP 355
             LL KDP KR+G      + ++ H  F+ +NW +L   +  PP +P
Sbjct: 233 EALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 97.5 bits (243), Expect = 1e-22
 Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 14/137 (10%)

Query: 232 RSDSDSSEKSNSFVGTEEYVAPEII----EGKGH-DFAVDWWSLGVVLHEMLYGATPFRG 286
           R  +D + +SN  VGT +Y++PEI+    +GKG      DWWSLGV ++EMLYG TPF  
Sbjct: 151 RLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210

Query: 287 SSRKETFYRILCR------PPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFK 338
            S  ET+ +I+        PPD+       ++LIRRL+    T+  R G+++ K H FF+
Sbjct: 211 ESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFE 270

Query: 339 GVNWELLLKISRPPNIP 355
           G++W+  ++ S  P +P
Sbjct: 271 GIDWD-NIRNSTAPYVP 286

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 96.6 bits (240), Expect = 2e-22
 Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 15/163 (9%)

Query: 20  IVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
           ++  LG GA G VFLV+ V   +S   +A+KV+ +  I +K+K   +            E
Sbjct: 4   LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRT---------E 54

Query: 77  QRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           ++VL ++ + P L  L     TD  +   +DY  G +L +   Q+  + F +  ++ Y+ 
Sbjct: 55  RQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSG 112

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
           E+VLALE+LH +GI+YRD+K ENI++  NGH++L DF LS + 
Sbjct: 113 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 95.1 bits (237), Expect = 3e-22
 Identities = 79/323 (24%), Positives = 125/323 (38%), Gaps = 73/323 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA  VV+    + ++E  A+K I  DL EK    +      D+ R+   E + +   
Sbjct: 9   IGVGATAVVYAAICLPNNEKVAIKRI--DL-EKCQTSV------DELRK---EVQAMSQC 56

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ-SEQMFSDDTIRFYAAELVLALE 142
            HP + +          +   + Y  G  L  + K         +  I     E++  LE
Sbjct: 57  NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLE 116

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH+ G ++RD+K  NI++ E+G + + DF +S                           
Sbjct: 117 YLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSA-------------------------- 150

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE-GKGH 261
                       SL D                  + +   +FVGT  ++APE++E   G+
Sbjct: 151 ------------SLADGG--------------DRTRKVRKTFVGTPCWMAPEVMEQVHGY 184

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDLVGEPTP------LRNLI 314
           DF  D WS G+   E+  GA P+      +     L   PP L             R +I
Sbjct: 185 DFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMI 244

Query: 315 RRLLEKDPTKRIGVEEIKGHEFF 337
              L+KDP+KR   EE+  H+FF
Sbjct: 245 SLCLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 94.9 bits (236), Expect = 4e-22
 Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 11/128 (8%)

Query: 239 EKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS----SRKETFY 294
           +K     GT  Y+APE+++G+ +DF+VDW++LG  L+EM+ G +PFR       ++E   
Sbjct: 149 KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR 208

Query: 295 RILCRPPDLVGEPTP-LRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELL-LK 347
           R L    +   + +P  ++L   LL+KDP KR+G      +E++ H  FK +NW  L   
Sbjct: 209 RTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAG 268

Query: 348 ISRPPNIP 355
           +  PP IP
Sbjct: 269 MLEPPFIP 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 93.9 bits (234), Expect = 7e-22
 Identities = 79/327 (24%), Positives = 127/327 (38%), Gaps = 81/327 (24%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           ++  +G G  G V+  +D+ + E  A+KVI               + GD +  I  E  +
Sbjct: 7   LIQRIGSGTYGDVYKARDIATGELVAIKVI-------------KLEPGDDFEIIQQEISM 53

Query: 80  LRNVEHPLLPRLRGV-LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           L+   HP +    G  L  DK +   ++YC G  L  +  Q +    S+  I +   E +
Sbjct: 54  LKECRHPNIVAYFGSYLRRDK-LWIVMEYCGGGSLQDIY-QVTRGPLSELQIAYVCRETL 111

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             L YLH  G ++RD+K  NI++ E+G + L DF +S +L+               T   
Sbjct: 112 KGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLT--------------AT--- 154

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE- 257
           I KR                                        SF+GT  ++APE+   
Sbjct: 155 IAKR---------------------------------------KSFIGTPYWMAPEVAAV 175

Query: 258 --GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGEP--TPL 310
               G+D   D W+LG+   E+     P          + I      PP L  +   +P+
Sbjct: 176 ERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPV 235

Query: 311 -RNLIRRLLEKDPTKRIGVEEIKGHEF 336
             + I++ L KDP KR    ++  H F
Sbjct: 236 FHDFIKKCLTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 92.1 bits (229), Expect = 5e-21
 Identities = 84/340 (24%), Positives = 133/340 (39%), Gaps = 87/340 (25%)

Query: 17  CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
            +  +S LG GA G V   +   +   FALK I  D             N D  ++I  E
Sbjct: 2   KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTD------------PNPDLQKQILRE 49

Query: 77  QRVLRNVEHPLLPRLRG--VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ-MFSDDTIRFY 133
             + ++ + P + +  G  +  +   +G A++YC G  L S+ K+  ++     + +   
Sbjct: 50  LEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGK 109

Query: 134 AAELVL-ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
            AE VL  L YLH+  I++RD+KP NI++   G +                         
Sbjct: 110 IAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQV------------------------- 144

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                          K C  G+S E  V+S                  + +F GT  Y+A
Sbjct: 145 ---------------KLCDFGVSGE-LVNS-----------------LAGTFTGTSFYMA 171

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET------FYRILCRPPDLVGE 306
           PE I+GK +    D WSLG+ L E+     PF               Y +    P+L  E
Sbjct: 172 PERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDE 231

Query: 307 PT-------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           P          ++ I++ LEKDPT+R    ++  H + K 
Sbjct: 232 PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 90.8 bits (226), Expect = 9e-21
 Identities = 68/326 (20%), Positives = 121/326 (37%), Gaps = 82/326 (25%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            I+  LG G+ G V+     E+ +  A+KV+               D  +    I  E  
Sbjct: 6   DILEKLGEGSYGSVYKAIHKETGQVVAIKVV-----------PVEEDLQE----IIKEIS 50

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPG---RDLHSLRKQQSEQMFSDDTIRFYAA 135
           +L+  + P + +  G    +  +   ++YC      D+  +  +      +++ I     
Sbjct: 51  ILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKT----LTEEEIAAILY 106

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           + +  LEYLH+   ++RD+K  NI++ E G   L DF +S +L+     A   TV     
Sbjct: 107 QTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLT--DTMAKRNTV----- 159

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                                        IG                    T  ++APE+
Sbjct: 160 -----------------------------IG--------------------TPFWMAPEV 170

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT----PLR 311
           I+  G++   D WSLG+   EM  G  P+         + I  +PP  + +P        
Sbjct: 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFN 230

Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFF 337
           + +++ L KDP +R    ++  H F 
Sbjct: 231 DFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 91.1 bits (226), Expect = 9e-21
 Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 17/170 (10%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG  G V+  +  ++ + +A+K + +  I+ K  E            ++  +R++ ++
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TLALNERIMLSL 50

Query: 84  ----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
               + P +  +     T   + + +D   G DLH    Q    +FS+  +RFYAAE++L
Sbjct: 51  VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAEMRFYAAEIIL 108

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
            LE++HN  +VYRDLKP NI++ E+GH+ + D  L+   S K P AS  T
Sbjct: 109 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 93.0 bits (231), Expect = 3e-20
 Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 13/128 (10%)

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---P 301
           +GT +Y+APE++ GK H  AVDWW+LGV L E L G  PF   + ++ F  IL R    P
Sbjct: 541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWP 600

Query: 302 DLVGE---PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
           +  GE       +N I  LL  DPTKR G++E+K H  F GV+WE  L+    P IP   
Sbjct: 601 E--GEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGVDWE-NLQNQTMPFIP--- 654

Query: 359 EHENNESD 366
              ++E+D
Sbjct: 655 -QPDDETD 661

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 89.5 bits (222), Expect = 3e-20
 Identities = 76/313 (24%), Positives = 130/313 (41%), Gaps = 69/313 (22%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G+ G   LVK  E  + + +K I    +  K +E        + R+   E  VL
Sbjct: 5   VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKERE--------ESRK---EVAVL 53

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
            N++HP + + +     +  +   +DYC G DL+     Q   +F +D I  +  ++ LA
Sbjct: 54  SNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLA 113

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           L+++H+  I++RD+K +NI +                                 T+ G  
Sbjct: 114 LKHVHDRKILHRDIKSQNIFL---------------------------------TKDGTI 140

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
           K   F       GI+                R  + + E + + +GT  Y++PEI E + 
Sbjct: 141 KLGDF-------GIA----------------RVLNSTVELARTCIGTPYYLSPEICENRP 177

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLIRRLL 318
           ++   D W+LG VL+EM      F   + K    +I+    PP        LRNL+ +L 
Sbjct: 178 YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLF 237

Query: 319 EKDPTKRIGVEEI 331
           +++P  R  V  I
Sbjct: 238 KRNPRDRPSVNSI 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 89.0 bits (221), Expect = 5e-20
 Identities = 72/327 (22%), Positives = 130/327 (39%), Gaps = 79/327 (24%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  LG GA G V+  +  E+    A K+I      +  +EL +            E  +
Sbjct: 9   IIGELGDGAFGKVYKAQHKETGLFAAAKII----QIESEEELED---------FMVEIDI 55

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L   +HP +  L      +  +   I++C G  L S+   + E+  ++  IR+   +++ 
Sbjct: 56  LSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSI-MLELERGLTEPQIRYVCRQMLE 114

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           AL +LH+  +++RDLK  NI++  +G + L DF +S K                  +S +
Sbjct: 115 ALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKN-----------------KSTL 157

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII--- 256
           +KR                                       ++F+GT  ++APE++   
Sbjct: 158 QKR---------------------------------------DTFIGTPYWMAPEVVACE 178

Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPL 310
             +   +D+  D WSLG+ L E+     P    +      +IL   P  + +P    +  
Sbjct: 179 TFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSF 238

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
            + ++  L KDP  R    E+  H F 
Sbjct: 239 NDFLKSCLVKDPDDRPTAAELLKHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 88.9 bits (220), Expect = 6e-20
 Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 17/170 (10%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG  G V+  +  ++ + +A+K + +  I+ K  E            ++  +R++ ++
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TLALNERIMLSL 50

Query: 84  ----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
               + P +  +     T   + + +D   G DLH    Q    +FS+  +RFYA E++L
Sbjct: 51  VSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG--VFSEKEMRFYATEIIL 108

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
            LE++HN  +VYRDLKP NI++ E+GH+ + D  L+   S K P AS  T
Sbjct: 109 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 73/340 (21%), Positives = 123/340 (36%), Gaps = 98/340 (28%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  +G G  G V+  +  ++ +  A+K++  D+IE + +E            I  E  +
Sbjct: 10  LVEVIGEGTYGKVYKARHKKTGQLVAIKIM--DIIEDEEEE------------IKEEYNI 55

Query: 80  LRNV-EHPLLPRLRGV------LSTDKFVGYAIDYCPG-------RDLHSLRKQQSEQMF 125
           LR    HP +    G          D  +   ++ C G       + L    K+  E+  
Sbjct: 56  LRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEW- 114

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
               I +   E +  L YLH   +++RD+K +NI++ +N  + LVDF +S +L       
Sbjct: 115 ----IAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLD------ 164

Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV 245
              T+   NT                                                F+
Sbjct: 165 --STLGRRNT------------------------------------------------FI 174

Query: 246 GTEEYVAPEIIEGK-----GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP 300
           GT  ++APE+I         +D   D WSLG+   E+  G  P          ++I   P
Sbjct: 175 GTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP 234

Query: 301 PDLVGEPTP----LRNLIRRLLEKDPTKRIGVEEIKGHEF 336
           P  +  P        + I   L K+  +R  +EE+  H F
Sbjct: 235 PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 85.7 bits (212), Expect = 6e-19
 Identities = 68/322 (21%), Positives = 123/322 (38%), Gaps = 68/322 (21%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA    +  +DV++    A+K +            T+++  +    +  E R++  +
Sbjct: 8   LGTGAFSSCYQARDVKTGTLMAVKQV-------TYVRNTSSEQEEVVEALRKEIRLMARL 60

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP + R+ G    D      +++  G  +  L  +     F +  I  Y  +L+  L Y
Sbjct: 61  NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGA--FKEAVIINYTEQLLRGLSY 118

Query: 144 LHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           LH   I++RD+K  N++I   G  + + DF  + +L+ K             T +G    
Sbjct: 119 LHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG------------TGAG---- 162

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                                               E     +GT  ++APE++ G+ + 
Sbjct: 163 ------------------------------------EFQGQLLGTIAFMAPEVLRGEQYG 186

Query: 263 FAVDWWSLGVVLHEMLYGATPFRG---SSRKETFYRILC--RPPDLVGEPTP-LRNLIRR 316
            + D WS+G V+ EM     P+     S+     ++I      P +    +P LR++  R
Sbjct: 187 RSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLR 246

Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
            LE  P  R    E+  H  F+
Sbjct: 247 CLELQPEDRPPSRELLKHPVFR 268

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 85.3 bits (211), Expect = 8e-19
 Identities = 72/309 (23%), Positives = 123/309 (39%), Gaps = 71/309 (22%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I++ +G+G+ GVVF V        +A+K I          +L+  +  ++   I  E RV
Sbjct: 4   ILNKIGKGSFGVVFKVVRKADKRVYAMKQI----------DLSKMNRREREEAID-EARV 52

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI-RFYAAELV 138
           L  ++   + R          +   ++Y    DLH L K Q  +   +D + RF+  +++
Sbjct: 53  LAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFF-IQIL 111

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
           L L +LH+  I++RD+K  N+ +    ++ + D  ++  LS  T          ANT  G
Sbjct: 112 LGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT--------NFANTIVG 163

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                                                           T  Y++PE+ E 
Sbjct: 164 ------------------------------------------------TPYYLSPELCED 175

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLIRR 316
           K ++   D W+LGVVL+E   G  PF  +++     +I+    PP        L  LI +
Sbjct: 176 KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQ 235

Query: 317 LLEKDPTKR 325
            L KD  +R
Sbjct: 236 CLTKDYRQR 244

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 85.2 bits (211), Expect = 8e-19
 Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 73/315 (23%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRV 79
           +  LG+GA G   L +  E        V+W        KE+      +K RR +  E  +
Sbjct: 5   IRVLGKGAFGEATLYRRTEDDS----LVVW--------KEVNLTRLSEKERRDALNEIVI 52

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L  ++HP +         D  +   ++Y  G  L+    +Q  Q+F ++ + +Y  ++V 
Sbjct: 53  LSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVS 112

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           A+ Y+H  GI++RD+K  NI +                                 T++G+
Sbjct: 113 AVSYIHKAGILHRDIKTLNIFL---------------------------------TKAGL 139

Query: 200 KKRRSF-LSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
            K   F +SK   S  S+ + V                        VGT  Y++PE+ +G
Sbjct: 140 IKLGDFGISKILGSEYSMAETV------------------------VGTPYYMSPELCQG 175

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRR 316
             ++F  D W+LG VL+E+L     F  ++      +I+     P +    + L +L+  
Sbjct: 176 VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHS 235

Query: 317 LLEKDPTKRIGVEEI 331
           LL++DP KR   +E+
Sbjct: 236 LLQQDPEKRPTADEV 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 85.7 bits (213), Expect = 9e-19
 Identities = 81/359 (22%), Positives = 125/359 (34%), Gaps = 118/359 (32%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF----E 76
              LG G   VV+  +D E+    A+K I       K  E     +G     I+F    E
Sbjct: 5   GKKLGEGTYAVVYKARDKETGRIVAIKKI-------KLGERKEAKDG-----INFTALRE 52

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF---- 132
            ++L+ ++HP +  L  V      +    ++    DL        E++  D +I      
Sbjct: 53  IKLLQELKHPNIIGLLDVFGHKSNINLVFEFMET-DL--------EKVIKDKSIVLTPAD 103

Query: 133 ---YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
              Y    +  LEYLH+  I++RDLKP N++I  +G + L DF L+          SP  
Sbjct: 104 IKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSF------GSPNR 157

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
            +                                                     V T  
Sbjct: 158 KMTHQ--------------------------------------------------VVTRW 167

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR--------------KETFY 294
           Y APE++ G + +   VD WS+G +  E+L       G S                E  +
Sbjct: 168 YRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW 227

Query: 295 RILCRPPDLVG----EPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
             +   PD V      PTPL+           +L++RLL  +P KRI   +   H +F 
Sbjct: 228 PGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 83.3 bits (206), Expect = 6e-18
 Identities = 66/319 (20%), Positives = 126/319 (39%), Gaps = 76/319 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +  D  +    A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 73

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP +  +         +   +++  G  L  +         +++ I      ++ AL +
Sbjct: 74  QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLAVLKALSF 130

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH  G+++RD+K ++I++  +G + L DF    ++S + P                 +R+
Sbjct: 131 LHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-----------------RRK 173

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
           S                                        VGT  ++APE+I    +  
Sbjct: 174 SL---------------------------------------VGTPYWMAPEVISRLPYGT 194

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP----LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +   RI    P  +         LR+ + R+L 
Sbjct: 195 EVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLV 254

Query: 320 KDPTKRIGVEEIKGHEFFK 338
           +DP +R    E+  H F  
Sbjct: 255 RDPAQRATAAELLNHPFLA 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 83.2 bits (205), Expect = 8e-18
 Identities = 76/331 (22%), Positives = 135/331 (40%), Gaps = 79/331 (23%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  LG GA G V+  K+ E+    A KVI          E  + +  + Y     E  +
Sbjct: 16  IIGELGDGAFGKVYKAKNKETGALAAAKVI----------ETKSEEELEDY---MVEIEI 62

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L    HP + +L G    D  +   I++CPG  + ++   + ++  ++  I+    +++ 
Sbjct: 63  LATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVICRQMLE 121

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           AL+YLH+M I++RDLK  N+++  +G I L DF +S K                N ++ +
Sbjct: 122 ALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAK----------------NVKT-L 164

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII--- 256
           ++R S                                       F+GT  ++APE++   
Sbjct: 165 QRRDS---------------------------------------FIGTPYWMAPEVVMCE 185

Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP----L 310
             +   +D+  D WSLG+ L EM     P    +      +I    P  + +P+      
Sbjct: 186 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEF 245

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+ ++  L+K P  R    ++  H F   V 
Sbjct: 246 RDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 85.3 bits (211), Expect = 9e-18
 Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 15/162 (9%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           +F    IV  + RGA G V+L +   +S+ +A+KV+      KK+  +  N       ++
Sbjct: 5   EFV---IVKPISRGAFGKVYLGRKKNNSKLYAVKVV------KKADMINKN----MVHQV 51

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
             E+  L   + P +  L   L +   V   ++Y  G D+ SL        F ++    Y
Sbjct: 52  QAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKY 109

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +E+ LAL+YLH  GI++RDLKP+N++I   GHI L DF LS
Sbjct: 110 ISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 81.8 bits (202), Expect = 2e-17
 Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 10/160 (6%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V   +   + + +A K + +  ++K+  E          +    E+++L  V
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGE----------QMALNEKKILEKV 50

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
               +  L     T   +   +    G DL        E  F +    FYAA+++  LE+
Sbjct: 51  SSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEH 110

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
           LH   IVYRDLKPEN+++ ++G++ + D  L+ +L     
Sbjct: 111 LHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK 150

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 81.2 bits (200), Expect = 2e-17
 Identities = 49/132 (37%), Positives = 79/132 (59%), Gaps = 11/132 (8%)

Query: 237 SSEKSNSFVGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ET 292
           S +K ++ VGT  Y+APE+++ G  +D + DW+SLG +L ++L G +PFR    K   E 
Sbjct: 148 SKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207

Query: 293 FYRILCRPPDLVGEPTP-LRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWE-LL 345
               L    +L    +P L++L+  LL++D +KR+G      +E+K H FFKG++W+ + 
Sbjct: 208 DRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVY 267

Query: 346 LKISRPPNIPAR 357
           L+   PP IP R
Sbjct: 268 LQKYPPPLIPPR 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 81.2 bits (200), Expect = 2e-17
 Identities = 72/314 (22%), Positives = 131/314 (41%), Gaps = 73/314 (23%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
            ++ LR+V   G G+ G   LV+ V S + +A+K I      +  K  +  ++  K    
Sbjct: 1   QYNVLRVV---GEGSFGRALLVQHVNSDQKYAMKEI------RLPKSSSAVEDSRK---- 47

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
             E  +L  ++HP +   +     D  +   ++YC G DL    K Q  ++F +DTI  +
Sbjct: 48  --EAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQW 105

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
             ++ L ++++H   +++RD+K +NI                                  
Sbjct: 106 FVQMCLGVQHIHEKRVLHRDIKSKNI---------------------------------- 131

Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP 253
                      FL++     + L D   S R+   P + +         ++VGT  YV P
Sbjct: 132 -----------FLTQNGK--VKLGD-FGSARLLTSPGAYA--------CTYVGTPYYVPP 169

Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLR 311
           EI E   ++   D WSLG +L+E+     PF+ +S K    ++      P        LR
Sbjct: 170 EIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELR 229

Query: 312 NLIRRLLEKDPTKR 325
           +LI+++ +++P  R
Sbjct: 230 SLIKQMFKRNPRSR 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 81.4 bits (202), Expect = 2e-17
 Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK---YRRISFEQRVL 80
           LG G  GVV+  +D ++ E  ALK I           L N + G      R IS    +L
Sbjct: 7   LGEGTYGVVYKARDKKTGEIVALKKI----------RLDNEEEGIPSTALREIS----LL 52

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + ++HP + +L  V+ T++ +    +YC   DL     ++   + S + I+    +L+  
Sbjct: 53  KELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPL-SPNLIKSIMYQLLRG 110

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           L Y H+  I++RDLKP+NI+I  +G + L DF L+          + + V
Sbjct: 111 LAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV 160

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 81.1 bits (200), Expect = 3e-17
 Identities = 46/130 (35%), Positives = 77/130 (59%), Gaps = 11/130 (8%)

Query: 237 SSEKSNSFVGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ET 292
           S +K ++ VGT  Y+APE+++ G  +D + DW+SLG +L ++L G +PFR    K   E 
Sbjct: 148 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207

Query: 293 FYRILCRPPDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL- 345
               L    +L    +P LR+L+  LL++D  +R+     G +E+K H FF+ ++W+++ 
Sbjct: 208 DRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVF 267

Query: 346 LKISRPPNIP 355
           L+   PP IP
Sbjct: 268 LQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 81.4 bits (201), Expect = 3e-17
 Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 11/122 (9%)

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS----SRKETFYRILCRP 300
           VGT  Y+APE+++ + + F+ DWW LG +++EM+ G +PFR       R+E   R+    
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ 221

Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELL-LKISRPPN 353
            +   + +   R++ R+LL KDP  R+G      EE+K H FF+  N++ L   +  PP 
Sbjct: 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPF 281

Query: 354 IP 355
            P
Sbjct: 282 CP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 81.6 bits (201), Expect = 4e-17
 Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 15/150 (10%)

Query: 232 RSDSDSSEKSNSFVGTEEYVAPEIIE----GKG-HDFAVDWWSLGVVLHEMLYGATPFRG 286
           + + D + +S+  VGT +Y++PEI++    G G +    DWWSLGV ++EMLYG TPF  
Sbjct: 151 KMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210

Query: 287 SSRKETFYRILCR------PPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFK 338
            S  ET+ +I+        P  +       ++LI+RL+     +  + G+E+ K H FF+
Sbjct: 211 ESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFE 270

Query: 339 GVNWELLLKISRP--PNIPARFEHENNESD 366
           G++WE +  +  P  P++ +  +  N + D
Sbjct: 271 GIDWENIRNLEAPYIPDVSSPSDTSNFDVD 300

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 80.8 bits (200), Expect = 5e-17
 Identities = 74/364 (20%), Positives = 133/364 (36%), Gaps = 125/364 (34%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFE 76
            ++ +G GA G V+  +D+ +    ALK +           +  ++ G      R I+  
Sbjct: 3   ELAEIGEGAYGTVYKARDLNTGRFVALKKV----------RVPLSEEGIPLSTLREIALL 52

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAID----------YCPGRDLHSLRKQQSEQMFS 126
           ++ L + EHP + RL      D   G   D          +   +DL +   +  +    
Sbjct: 53  KQ-LESFEHPNIVRLL-----DVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLP 105

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
            +TI+    +L+  +++LH+  IV+RDLKP+NI++  +G + + DF              
Sbjct: 106 PETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADF-------------- 151

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
                      G+ +  SF     S                                 V 
Sbjct: 152 -----------GLARIYSFEMALTS--------------------------------VVV 168

Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRILCRPPDLVG 305
           T  Y APE++    +   VD WS+G +  E+ +   P FRG+S  +   +I     D++G
Sbjct: 169 TLWYRAPEVLLQSSYATPVDMWSVGCIFAEL-FRRRPLFRGTSEADQLDKIF----DVIG 223

Query: 306 EPT---------------------PLR-----------NLIRRLLEKDPTKRIGVEEIKG 333
            P+                       +           +L++++L  +P KRI   E   
Sbjct: 224 LPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283

Query: 334 HEFF 337
           H +F
Sbjct: 284 HPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 80.7 bits (199), Expect = 6e-17
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 14/152 (9%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G+ G V  V+  ++   +ALK I +  I  +S E+T+            E+ VL  V
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRS-EVTHT---------LAERTVLAQV 50

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIRFYAAELVLALE 142
             P +  L+    + + +   + +  G +L H L   Q E  F     RFY AEL+ ALE
Sbjct: 51  NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHL---QREGRFDLSRARFYTAELLCALE 107

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
            LH   ++YRDLKPENI++   GHI L DF L
Sbjct: 108 NLHKFNVIYRDLKPENILLDYQGHIALCDFGL 139

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 79.9 bits (197), Expect = 6e-17
 Identities = 71/319 (22%), Positives = 126/319 (39%), Gaps = 62/319 (19%)

Query: 22  SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR 81
           + +G G+ G V+L  +  S E  A+K +    +   SK+   +      R I+    +L+
Sbjct: 6   ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIA----LLK 61

Query: 82  NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            ++H  + +  G       +   ++Y PG  + +L        F +  +R +  +++  L
Sbjct: 62  ELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGA--FEETLVRNFVRQILKGL 119

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
            YLHN GI++RD+K  NI++   G I + DF +S KL              AN+ S   K
Sbjct: 120 NYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLE-------------ANSLST--K 164

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
                                P                   S  G+  ++APE+++   +
Sbjct: 165 TNG----------------ARP-------------------SLQGSVFWMAPEVVKQTSY 189

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI----LCRPPDLVGEPTPLRNLIRRL 317
               D WSLG ++ EML G  PF   ++ +  ++I        P  +       + + + 
Sbjct: 190 TRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEA--IDFLEKT 247

Query: 318 LEKDPTKRIGVEEIKGHEF 336
            E D  KR    E+  H F
Sbjct: 248 FEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 80.3 bits (198), Expect = 7e-17
 Identities = 81/320 (25%), Positives = 132/320 (41%), Gaps = 78/320 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   DV + +  A+K +  +L ++  KEL  N           E  V+R  
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQM--NLQQQPKKELIIN-----------EILVMREN 73

Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           +HP ++  L   L  D+ +   ++Y  G    SL    +E    +  I     E + ALE
Sbjct: 74  KHPNIVNYLDSYLVGDE-LWVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 129

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH+  +++RD+K +NI++  +G + L DF                              
Sbjct: 130 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFG----------------------------- 160

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                 FC+            +I P+   RS         + VGT  ++APE++  K + 
Sbjct: 161 ------FCA------------QITPEQSKRS---------TMVGTPYWMAPEVVTRKAYG 193

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 253

Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           E D  KR   +E+  H F K
Sbjct: 254 EMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 79.2 bits (195), Expect = 9e-17
 Identities = 75/321 (23%), Positives = 129/321 (40%), Gaps = 70/321 (21%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  +G G+ G ++L K    SE   +K I    +  K KE +             E  +
Sbjct: 4   IIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKK-----------EVIL 52

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L  ++HP +         +  +   ++YC G DL     +Q   +FS+D I  +  ++ L
Sbjct: 53  LAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISL 112

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            L+++H+  I++RD                                             I
Sbjct: 113 GLKHIHDRKILHRD---------------------------------------------I 127

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
           K +  FLSK   +G+         ++G    +R  +DS E + + VGT  Y++PEI + +
Sbjct: 128 KSQNIFLSK---NGMV-------AKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNR 177

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRR 316
            ++   D WSLG VL+E+     PF G++  +   +I C+    P        LR+LI +
Sbjct: 178 PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKI-CQGYFAPISPNFSRDLRSLISQ 236

Query: 317 LLEKDPTKRIGVEEIKGHEFF 337
           L +  P  R  +  I    F 
Sbjct: 237 LFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 79.5 bits (196), Expect = 1e-16
 Identities = 72/332 (21%), Positives = 137/332 (41%), Gaps = 88/332 (26%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL--TNNDNGDKYRR-----ISFE 76
           +G+G  G V+L  +V + E  A+K +          EL  T     D  ++     +  E
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQV----------ELPATIAGRHDSRQKDMVKALRSE 58

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
              L++++H  + +  G  +T++++   ++Y PG  + S  +      F +  +RF+  +
Sbjct: 59  IETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGR--FEEQLVRFFTEQ 116

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           ++  L YLH+ GI++RDLK +N+++  +G   + DF                        
Sbjct: 117 VLEGLAYLHSKGILHRDLKADNLLVDADGICKISDF------------------------ 152

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
            GI K+                               D   ++++ S  G+  ++APE+I
Sbjct: 153 -GISKKSD-----------------------------DIYDNDQNMSMQGSVFWMAPEVI 182

Query: 257 E--GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCR------PPDLVG 305
               +G+   VD WSLG V+ EM  G  P+   S +E     +++  +      PPD+  
Sbjct: 183 HSYSQGYSAKVDIWSLGCVVLEMFAGRRPW---SDEEAIAAMFKLGNKRSAPPIPPDVSM 239

Query: 306 EPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEF 336
             +P+  + +      +P  R    E+  H F
Sbjct: 240 NLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 79.1 bits (195), Expect = 1e-16
 Identities = 85/348 (24%), Positives = 128/348 (36%), Gaps = 99/348 (28%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D  E +    T        R IS    +L
Sbjct: 5   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPST------AIREIS----LL 53

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + + HP + +L  V+ T+  +    ++   +DL                I+ Y  +L+  
Sbjct: 54  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQG 112

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           L + H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 113 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 147

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 148 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 176

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRP-----------PDLVG 305
            +  AVD WSLG +  EM+     F G S  +  +RI   L  P           PD   
Sbjct: 177 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP 236

Query: 306 E-----PTPL-----------RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
                                R+L+ ++L  DP KRI  +    H FF
Sbjct: 237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 78.6 bits (194), Expect = 2e-16
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+ G V+   +++  + FA+K +      +  +E          +++  E  +L  +
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAV--------KQLEQEIALLSKL 59

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + +  G    +  +   ++  PG  L  L K+     F +  IR Y  +++L LEY
Sbjct: 60  QHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEY 117

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
           LH+   V+RD+K  NI++  NG + L DF ++ ++ 
Sbjct: 118 LHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 79.4 bits (195), Expect = 2e-16
 Identities = 78/320 (24%), Positives = 132/320 (41%), Gaps = 78/320 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   DV + +  A++ +  +L ++  KEL  N           E  V+R  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 74

Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           ++P ++  L   L  D+ +   ++Y  G    SL    +E    +  I     E + ALE
Sbjct: 75  KNPNIVNYLDSYLVGDE-LWVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 130

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH+  +++RD+K +NI++  +G + L DF                              
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFG----------------------------- 161

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                 FC+            +I P+   RS           VGT  ++APE++  K + 
Sbjct: 162 ------FCA------------QITPEQSKRST---------MVGTPYWMAPEVVTRKAYG 194

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254

Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           + D  KR   +E+  H+F K
Sbjct: 255 DMDVEKRGSAKELLQHQFLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 78.9 bits (195), Expect = 2e-16
 Identities = 74/352 (21%), Positives = 120/352 (34%), Gaps = 102/352 (28%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           ++  +G GA GVV   ++  + E  A+K           K   + D+ D  +    E +V
Sbjct: 5   VLGVVGEGAYGVVLKCRNKATGEIVAIK-----------KFKESEDDEDVKKTALREVKV 53

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           LR + H  +  L+        +    +Y     L  L           D +R Y  +L+ 
Sbjct: 54  LRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGG--LPPDAVRSYIWQLLQ 111

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           A+ Y H+  I++RD+KPENI         LV      KL                     
Sbjct: 112 AIAYCHSHNIIHRDIKPENI---------LVSESGVLKL--------------------- 141

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                     C  G +        R     P+   +D       +V T  Y APE++ G 
Sbjct: 142 ----------CDFGFA--------RALRARPASPLTD-------YVATRWYRAPELLVGD 176

Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---------------------- 296
             +   VD W++G ++ E+L G   F G S  +  Y I                      
Sbjct: 177 TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236

Query: 297 -LCRPPDLVGEPTPLR----------NLIRRLLEKDPTKRIGVEEIKGHEFF 337
            +  P     E    R          + ++  L  DP +R+  +E+  H +F
Sbjct: 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 78.6 bits (193), Expect = 2e-16
 Identities = 80/320 (25%), Positives = 131/320 (40%), Gaps = 78/320 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G VF   DV + +  A+K I  +L ++  KEL  N           E  V++ +
Sbjct: 27  IGQGASGTVFTAIDVATGQEVAIKQI--NLQKQPKKELIIN-----------EILVMKEL 73

Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           ++P ++  L   L  D+     ++Y  G    SL    +E    +  I     E + ALE
Sbjct: 74  KNPNIVNFLDSFLVGDELF-VVMEYLAG---GSLTDVVTETCMDEAQIAAVCRECLQALE 129

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH   +++RD+K +N+++  +G + L DF                              
Sbjct: 130 FLHANQVIHRDIKSDNVLLGMDGSVKLTDFG----------------------------- 160

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                 FC+            +I P+   RS         + VGT  ++APE++  K + 
Sbjct: 161 ------FCA------------QITPEQSKRS---------TMVGTPYWMAPEVVTRKAYG 193

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCL 253

Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           E D  KR   +E+  H F K
Sbjct: 254 EMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 78.7 bits (194), Expect = 4e-16
 Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 18/169 (10%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVI--WRDLIEKKSKELTNNDNGDKYR 71
           DF  L+++   GRGA G V +VK   + + +A+K++  W  L   K  E         +R
Sbjct: 2   DFEILKVI---GRGAFGEVAVVKMKNTGQVYAMKILNKWEML---KRAETAC------FR 49

Query: 72  RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
               E+ VL N +   +  L      +  +   +DY  G DL +L  +  +++  +D  R
Sbjct: 50  E---ERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRL-PEDMAR 105

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
           FY AE+VLA++ +H +G V+RD+KP+N+++ +NGHI L DF    +L  
Sbjct: 106 FYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 76.9 bits (190), Expect = 6e-16
 Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 22/166 (13%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVI-WRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++  +G+G+ G V  V+     +    K I + ++ EK+ ++L +            E  
Sbjct: 4   VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVS------------EVN 51

Query: 79  VLRNVEHPLLPRL--RGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIRFYA 134
           +LR ++HP + R   R +  +++ +   ++YC G DL  L  + ++  +   ++ I    
Sbjct: 52  ILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRIL 111

Query: 135 AELVLALEYLHN-----MGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +L+LAL   HN       +++RDLKP NI +  N ++ L DF L+
Sbjct: 112 TQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 77.4 bits (190), Expect = 8e-16
 Identities = 69/318 (21%), Positives = 136/318 (42%), Gaps = 76/318 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V + ++  S    A+K++  DL +++ +EL  N           E  ++R+ 
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMM--DLRKQQRRELLFN-----------EVVIMRDY 75

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +H  +  +       + +   +++  G  L  +    S+   +++ I      ++ AL Y
Sbjct: 76  QHQNVVEMYKSYLVGEELWVLMEFLQGGALTDI---VSQTRLNEEQIATVCESVLQALCY 132

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH+ G+++RD+K ++I++  +G + L DF    ++S   P                 KR+
Sbjct: 133 LHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-----------------KRK 175

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                                                  S VGT  ++APE+I    +  
Sbjct: 176 ---------------------------------------SLVGTPYWMAPEVISRTPYGT 196

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV---GEPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+   S  +   R+   PP  +    + +P LR+ + R+L 
Sbjct: 197 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLT 256

Query: 320 KDPTKRIGVEEIKGHEFF 337
           ++P +R   +E+  H F 
Sbjct: 257 REPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 77.6 bits (192), Expect = 9e-16
 Identities = 89/363 (24%), Positives = 142/363 (39%), Gaps = 116/363 (31%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIW---RDLIEKKSKELTNNDNGDKYRRISF 75
            I+  LG+GA G+V+   D  + E  ALK I+   R+            D    +R I F
Sbjct: 10  EILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA----------TDAQRTFREIMF 59

Query: 76  EQRVLRNVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRF 132
            Q  L +  HP + +L  V+    DK +    +Y    DLH+ +R      +  D   R+
Sbjct: 60  LQE-LGD--HPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN----ILEDVHKRY 111

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
              +L+ AL+Y+H+  +++RDLKP NI++  +  + L DF L+                 
Sbjct: 112 IMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLA----------------- 154

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
              RS                 + E+PV +                     +V T  Y A
Sbjct: 155 ---RS-----------LSELEENPENPVLT--------------------DYVATRWYRA 180

Query: 253 PEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT--- 308
           PEI+ G   +   VD WS+G +L EML G   F G+S      +I+    +++G P+   
Sbjct: 181 PEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKII----EVIGPPSAED 236

Query: 309 ----------------------PLR-----------NLIRRLLEKDPTKRIGVEEIKGHE 335
                                 PL            +L+++LL  +P KR+  EE   H 
Sbjct: 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP 296

Query: 336 FFK 338
           +  
Sbjct: 297 YVA 299

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 76/326 (23%), Positives = 134/326 (41%), Gaps = 79/326 (24%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  LG GA G V+  ++ E+    A KVI     + KS+E        +      E  +
Sbjct: 9   IIGELGDGAFGKVYKAQNKETGVLAAAKVI-----DTKSEE--------ELEDYMVEIDI 55

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L + +HP + +L      +  +   I++C G  + ++   + E+  ++  IR    + + 
Sbjct: 56  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV-MLELERPLTEPQIRVVCKQTLE 114

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           AL YLH   I++RDLK  NI+   +G I L DF +S K                NTR+ I
Sbjct: 115 ALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRT-I 157

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII--- 256
           ++R                                       +SF+GT  ++APE++   
Sbjct: 158 QRR---------------------------------------DSFIGTPYWMAPEVVMCE 178

Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT----PL 310
             + + +D+  D WSLG+ L EM     P    +      +I    P  + +P+      
Sbjct: 179 TSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEF 238

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
           ++ +++ LEK+   R    ++  H F
Sbjct: 239 KDFLKKCLEKNVDARWTTTQLLQHPF 264

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 78.3 bits (193), Expect = 2e-15
 Identities = 77/327 (23%), Positives = 135/327 (41%), Gaps = 62/327 (18%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  +G+G  G V+L  D   S   ALK I  DL           +N    +R   E ++
Sbjct: 6   IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS----------ENPLLKKRFLREAKI 55

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAAEL 137
             ++ HP +  +  + S    V Y + Y  G  L SL K   Q E +  +   +      
Sbjct: 56  AADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAF 115

Query: 138 V-------LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           +         +EY+H+ G+++RDLKP+NI++   G ++++D+                  
Sbjct: 116 LSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWG----------------- 158

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
            AA  +   ++    +       +   +  +S              S       VGT +Y
Sbjct: 159 -AAIFKKLEEEDLLDID------VDERNICYS--------------SMTIPGKIVGTPDY 197

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE---- 306
           +APE + G     + D ++LGV+L++ML  + P+R    ++  YR +   P  V      
Sbjct: 198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREI 257

Query: 307 PTPLRNLIRRLLEKDPTKRI-GVEEIK 332
           P  L  +  + L  DP +R   V+E+K
Sbjct: 258 PPFLSQIAMKALAVDPAERYSSVQELK 284

Length = 932

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 75.9 bits (186), Expect = 2e-15
 Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 78/320 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   D+ + +  A+K +  +L ++  KEL  N           E  V+R  
Sbjct: 27  IGQGASGTVYTAIDIATGQEVAIKQM--NLQQQPKKELIIN-----------EILVMREN 73

Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           ++P ++  L   L  D+ +   ++Y  G    SL    +E    +  I     E + AL+
Sbjct: 74  KNPNIVNYLDSYLVGDE-LWVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALD 129

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH+  +++RD+K +NI++  +G + L DF                              
Sbjct: 130 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFG----------------------------- 160

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                 FC+            +I P+   RS         + VGT  ++APE++  K + 
Sbjct: 161 ------FCA------------QITPEQSKRS---------TMVGTPYWMAPEVVTRKAYG 193

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 194 PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCL 253

Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           E D  +R   +E+  H F K
Sbjct: 254 EMDVDRRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 76.4 bits (189), Expect = 2e-15
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 27/180 (15%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISF 75
            ++  +G GA GVV    D  +    A+K I     DLI+ K              RI  
Sbjct: 3   ELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAK--------------RILR 48

Query: 76  EQRVLRNVEHPLLPRLRGVL---STDKF--VGYAI-DYCPGRDLHSLRKQQSEQMFSDDT 129
           E ++LR++ H  +  L  +L   S + F  V Y + +     DLH + K  S Q  +DD 
Sbjct: 49  EIKLLRHLRHENIIGLLDILRPPSPEDFNDV-YIVTELMET-DLHKVIK--SPQPLTDDH 104

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           I+++  +++  L+YLH+  +++RDLKP NI++  N  + + DF L+  + P   +    T
Sbjct: 105 IQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLT 164

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 75.0 bits (184), Expect = 3e-15
 Identities = 69/316 (21%), Positives = 130/316 (41%), Gaps = 74/316 (23%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ--R 78
           V  +G+G+ G V LV+     + + +K +             N  N  +  R + EQ  +
Sbjct: 5   VRVVGKGSYGEVSLVRHRTDGKQYVIKKL-------------NLRNASRRERKAAEQEAQ 51

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           +L  ++HP +   R     +  + Y +  +C G DL+   K+Q  ++  ++ +  +  ++
Sbjct: 52  LLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQI 111

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
            +AL+YLH   I++RDLK +N+ +                                 TR+
Sbjct: 112 AMALQYLHEKHILHRDLKTQNVFL---------------------------------TRT 138

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
            I K                       +G    +R   +  + +++ +GT  Y++PE+  
Sbjct: 139 NIIK-----------------------VGDLGIARVLENQCDMASTLIGTPYYMSPELFS 175

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPPDLVGEPTP-LRNLIR 315
            K +++  D W+LG  ++EM      F         YRI+  + P +  + +P L  LI 
Sbjct: 176 NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIA 235

Query: 316 RLLEKDPTKRIGVEEI 331
            +L K P KR  V+ I
Sbjct: 236 TMLSKRPEKRPSVKSI 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 75.6 bits (186), Expect = 3e-15
 Identities = 87/355 (24%), Positives = 134/355 (37%), Gaps = 120/355 (33%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA G+V   +D  + ++ A+K I +        + T       YR    E ++L+++
Sbjct: 18  VGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRT-------YR----ELKLLKHL 66

Query: 84  EHPLLPRLRGVLSTDKFVG-----YAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAEL 137
            H  +  L     +D F+      Y +    G DLH L   +  E+ F    I+++  ++
Sbjct: 67  RHENIISL-----SDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQF----IQYFLYQI 117

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
           +  L+Y+H+ G+V+RDLKP NI+I EN        DL                       
Sbjct: 118 LRGLKYVHSAGVVHRDLKPSNILINEN-------CDL----------------------- 147

Query: 198 GIKKRRSFLSKFCSSGIS-LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI- 255
                     K C  G++ ++DP                    +   +V T  Y APEI 
Sbjct: 148 ----------KICDFGLARIQDP--------------------QMTGYVSTRYYRAPEIM 177

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLV-------- 304
           +  + +D  VD WS G +  EML G   F G      F  I   L  PPD V        
Sbjct: 178 LTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSEN 237

Query: 305 ----------GEPTPL-----------RNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                      EP P             +L+ ++L  DP KRI   E   H +  
Sbjct: 238 TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA 292

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 73.8 bits (182), Expect = 4e-15
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 31/105 (29%)

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSR 289
           S+  +       + VGT  Y+APE++ GKG+     D WSLGV+L+E+            
Sbjct: 140 SKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------ 187

Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
                               L++LIR++L+KDP KR   +EI  H
Sbjct: 188 ------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 75.4 bits (185), Expect = 5e-15
 Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 14/165 (8%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  ++++   GRGA G V +VK   +   +A+K++ +  + K+++          +R  
Sbjct: 2   DFEIIKVI---GRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETAC-------FRE- 50

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
             E+ VL N +   +  L      + ++   +DY  G DL +L   + E    +D  RFY
Sbjct: 51  --ERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLL-SKFEDRLPEDMARFY 107

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
            AE+VLA+  +H +  V+RD+KP+N+++  NGHI L DF    K+
Sbjct: 108 IAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKM 152

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 74.1 bits (182), Expect = 6e-15
 Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 79/311 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G+V+  +D+ +    A+K I     E+ S+ +        +  I+    +    
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEI----PERDSRYVQ-----PLHEEIALHSYL---- 62

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL-RKQQSEQMFSDDTIRFYAAELVLALE 142
           +H  + +  G  S + F    ++  PG  L +L R +      ++ TI FY  +++  L+
Sbjct: 63  KHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLK 122

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           YLH+  IV+RD+K +N+++                                NT SG+ K 
Sbjct: 123 YLHDNQIVHRDIKGDNVLV--------------------------------NTYSGVVK- 149

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG--KG 260
              +S F +          S R+    P          + +F GT +Y+APE+I+   +G
Sbjct: 150 ---ISDFGT----------SKRLAGINPC---------TETFTGTLQYMAPEVIDKGPRG 187

Query: 261 HDFAVDWWSLGVVLHEMLYGATPF------RGSSRKETFYRILCRPPDLVGEPTPLRNLI 314
           +    D WSLG  + EM  G  PF      + +  K   ++I    P+ +      +N I
Sbjct: 188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEA--KNFI 245

Query: 315 RRLLEKDPTKR 325
            R  E DP KR
Sbjct: 246 LRCFEPDPDKR 256

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 72.8 bits (178), Expect = 2e-14
 Identities = 77/322 (23%), Positives = 131/322 (40%), Gaps = 77/322 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIE-KKSKELTNNDNGDKYRRISFEQRVLRN 82
           LG+GA G V+L  DV++    A K +  D    + SKE++          +  E ++L+N
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVS---------ALECEIQLLKN 60

Query: 83  VEHPLLPRLRGVLS--TDKFVGYAIDYCPGRDLHSLRKQ-QSEQMFSDDTIRFYAAELVL 139
           ++H  + +  G L    +K +   ++Y PG    S++ Q ++    ++   R Y  +++ 
Sbjct: 61  LQHERIVQYYGCLRDRAEKTLTIFMEYMPG---GSVKDQLKAYGALTESVTRKYTRQILE 117

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            + YLH+  IV+RD+K  NI+    G++ L DF                         G 
Sbjct: 118 GMSYLHSNMIVHRDIKGANILRDSAGNVKLGDF-------------------------GA 152

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
            KR   L   C SG  +                          S  GT  +++PE+I G+
Sbjct: 153 SKR---LQTICMSGTGIR-------------------------SVTGTPYWMSPEVISGE 184

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLI 314
           G+    D WSLG  + EML    P+         ++I  +P     P  + E    R+ +
Sbjct: 185 GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHA--RDFL 242

Query: 315 RRLLEKDPTKRIGVEEIKGHEF 336
             +   +   R   EE+  H F
Sbjct: 243 GCIF-VEARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 77/337 (22%), Positives = 130/337 (38%), Gaps = 76/337 (22%)

Query: 6   NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
              P  +   S L  V+ +G GA G V+ V    +   +ALKVI+             N 
Sbjct: 64  GSAPSAAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIY------------GNH 111

Query: 66  NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
                R+I  E  +LR+V HP + +   +   +  +   +++  G  L        EQ  
Sbjct: 112 EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD-EQFL 170

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
           +D      A +++  + YLH   IV+RD+KP N++I    ++ + DF +S  L+      
Sbjct: 171 AD-----VARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA------ 219

Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV 245
             +T+   N+  G                          I    P R ++D         
Sbjct: 220 --QTMDPCNSSVGT-------------------------IAYMSPERINTD--------- 243

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-----RP 300
                    +  G    +A D WSLGV + E   G  PF G  R+  +  ++C     +P
Sbjct: 244 ---------LNHGAYDGYAGDIWSLGVSILEFYLGRFPF-GVGRQGDWASLMCAICMSQP 293

Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEF 336
           P+     +   R+ I   L+++P KR    ++  H F
Sbjct: 294 PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330

Length = 353

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 73.1 bits (179), Expect = 2e-14
 Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 11/122 (9%)

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRPP 301
           VGT  Y+APE+++ + + F+ DWW+LG +L+EM+ G +PF+   +K   E   R++    
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ 221

Query: 302 DLVGEP-TP-LRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELL-LKISRPPN 353
           +   E  +P  R+L + LL KDP +R+G       E+K H  FK +N++ L   +  PP 
Sbjct: 222 EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPF 281

Query: 354 IP 355
            P
Sbjct: 282 KP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 2/107 (1%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           E+++L  + HP    L G    + ++   +++  G +  +  ++   + F +D   FYAA
Sbjct: 81  ERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAA 138

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
           ++VL  EYL ++ IVYRDLKPEN+++ ++G I + DF  +  +  +T
Sbjct: 139 QIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185

Length = 340

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 81/351 (23%), Positives = 124/351 (35%), Gaps = 105/351 (29%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
           V  +G G  GVV+  +D  + E  ALK I           L   D G      R IS   
Sbjct: 4   VEKIGEGTYGVVYKARDKLTGEIVALKKI----------RLETEDEGVPSTAIREISL-- 51

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
             L+ + HP + RL  V+ ++  +    ++    DL                I+ Y  +L
Sbjct: 52  --LKELNHPNIVRLLDVVHSENKLYLVFEFL-DLDLKKYMDSSPLTGLDPPLIKSYLYQL 108

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
           +  + Y H+  +++RDLKP+N++I   G + L DF L+                      
Sbjct: 109 LQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLA---------------------- 146

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
                R+F       G+ +    H                       V T  Y APEI+ 
Sbjct: 147 -----RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILL 172

Query: 258 G-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRP-----------PD 302
           G + +   VD WS+G +  EM+     F G S  +  +RI   L  P           PD
Sbjct: 173 GSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPD 232

Query: 303 LVG-----EPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFF 337
                       L            +L+ ++L  DP KRI  +    H +F
Sbjct: 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 72.2 bits (178), Expect = 3e-14
 Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 15/161 (9%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA G V+   D  + +  A+K +    + K++KEL  N           E  ++++ 
Sbjct: 27  IGEGASGEVYKATDRATGKEVAIKKM---RLRKQNKELIIN-----------EILIMKDC 72

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP +            +   ++Y  G  L  +  Q   +M ++  I +   E++  LEY
Sbjct: 73  KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRM-NEPQIAYVCREVLQGLEY 131

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
           LH+  +++RD+K +NI++ ++G + L DF  + +L+ +  +
Sbjct: 132 LHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK 172

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 72.0 bits (176), Expect = 4e-14
 Identities = 68/319 (21%), Positives = 130/319 (40%), Gaps = 76/319 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +  +  + +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 76

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            H  +  +         +   +++  G  L  +    +    +++ I      ++ AL Y
Sbjct: 77  HHENVVDMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIATVCLSVLRALSY 133

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LHN G+++RD+K ++I++  +G I L DF    ++S + P                 KR+
Sbjct: 134 LHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-----------------KRK 176

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
           S                                        VGT  ++APE+I    +  
Sbjct: 177 S---------------------------------------LVGTPYWMAPEVISRLPYGT 197

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE----PTPLRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +   RI    P  V +     + LR  +  +L 
Sbjct: 198 EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLV 257

Query: 320 KDPTKRIGVEEIKGHEFFK 338
           ++P++R   +E+  H F K
Sbjct: 258 REPSQRATAQELLQHPFLK 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 71.8 bits (177), Expect = 5e-14
 Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 29/175 (16%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF--- 75
             ++ +G G  G V+  ++ ++ E  ALK I           + N   G       F   
Sbjct: 2   EKIAQIGEGTYGQVYKARNKKTGELVALKKI----------RMENEKEG-------FPIT 44

Query: 76  ---EQRVLRNVEHPLLPRLRGVLSTDKFVG--YAI-DYCPGRDLHSLRKQQSEQMFSDDT 129
              E ++L+ + HP + RL+ ++ T K  G  Y + +Y    DL  L      + F++  
Sbjct: 45  AIREIKLLQKLRHPNIVRLKEIV-TSKGKGSIYMVFEYMD-HDLTGLLDSPEVK-FTESQ 101

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
           I+ Y  +L+  L+YLH+ GI++RD+K  NI+I  +G + L DF L+   + +   
Sbjct: 102 IKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA 156

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 70.7 bits (173), Expect = 8e-14
 Identities = 75/313 (23%), Positives = 128/313 (40%), Gaps = 71/313 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND-NGDKYRRISFEQRVLRN 82
           LG+G+ G V+LVKD ++     LKV+         KE+   + N ++  + + E ++L  
Sbjct: 8   LGKGSFGTVYLVKDKKAVAEERLKVL---------KEIPVGELNPNETVQANQEAQLLSK 58

Query: 83  VEHPLLPRLRG-VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
           ++HP + +     L  D F     +YC GRDL             D  +           
Sbjct: 59  LDHPAIVKFHASFLERDAFC-IITEYCEGRDL-------------DCKLE---------- 94

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIML-VDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           E  H    +      EN + +    ++L V +                          + 
Sbjct: 95  ELKHTGKTL-----SENQVCEWFIQLLLGVHY--------------------------MH 123

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
           +RR       +  I L++ +   +IG    SR    S + + +F GT  Y++PE ++ +G
Sbjct: 124 QRRILHRDLKAKNIFLKNNL--LKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQG 181

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE--PTPLRNLIRRLL 318
           +D   D WSLG +L+EM   A  F G +      RI+  P   + E     L ++++ +L
Sbjct: 182 YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSML 241

Query: 319 EKDPTKRIGVEEI 331
            KDP+ R    EI
Sbjct: 242 NKDPSLRPSAAEI 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 71.0 bits (174), Expect = 8e-14
 Identities = 75/340 (22%), Positives = 126/340 (37%), Gaps = 87/340 (25%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           L    L  +S LG G  G V  VK + +    A KV+    I  KS            ++
Sbjct: 2   LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVV---HIGAKSS---------VRKQ 49

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           I  E +++     P +    G    +  +   +++     L  + K+        + +  
Sbjct: 50  ILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGP--IPVEILGK 107

Query: 133 YAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
            A  +V  L YL+N+  I++RD+KP NI++   G I                        
Sbjct: 108 IAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQI------------------------ 143

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                           K C  G+S E  ++S                  +++FVGT  Y+
Sbjct: 144 ----------------KLCDFGVSGE-LINS-----------------IADTFVGTSTYM 169

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-----------ETFYRILCRP 300
           +PE I+G  +    D WSLG+ + E+  G  PF  S+             +   +I+  P
Sbjct: 170 SPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP 229

Query: 301 PDLVGE---PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           P  +     P  LR+ +   L KDPT+R   +++     F
Sbjct: 230 PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 71.5 bits (175), Expect = 9e-14
 Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 14/132 (10%)

Query: 240 KSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
           ++ +  GT EY+APEI+   GH  A DWW+LG+ ++E+L G  PF  +     + +IL  
Sbjct: 184 RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKIL-- 241

Query: 300 PPDLVGEP----TPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKISR 350
              ++  P       ++L+++LL  D TKR      G + +K H +F  ++W  LL   +
Sbjct: 242 -EGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLL--HK 298

Query: 351 PPNIPARFEHEN 362
              +P + +++N
Sbjct: 299 NVEVPYKPKYKN 310

Length = 340

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 71.7 bits (176), Expect = 9e-14
 Identities = 79/362 (21%), Positives = 135/362 (37%), Gaps = 116/362 (32%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           ++  LG+GA G+V   ++ E+SE   + +          K++TN      + +    +R 
Sbjct: 4   LIKELGQGAYGIVCSARNAETSEEETVAI----------KKITN-----VFSKKILAKRA 48

Query: 80  LRNVEHPLLPRLRG------VLSTDKFVGYAID--YCPGR----DLHSLRKQQSEQMFSD 127
           LR  E  LL   RG      +   D       +  Y        DLH + +  S Q  +D
Sbjct: 49  LR--ELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIR--SGQPLTD 104

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
              + +  +++  L+Y+H+  +++RDLKP N+++  +  + + DF L             
Sbjct: 105 AHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGL------------- 151

Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT 247
                                  + G S E+P  +                     +V T
Sbjct: 152 -----------------------ARGFS-ENPGENA---------------GFMTEYVAT 172

Query: 248 EEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD- 302
             Y APEI +  + +  A+D WS+G +L E+L     F+G    +   +IL     P + 
Sbjct: 173 RWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232

Query: 303 ---------------------------LVGEPTPLR-NLIRRLLEKDPTKRIGVEEIKGH 334
                                      +     PL  +L+ +LL  DPTKRI VEE   H
Sbjct: 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292

Query: 335 EF 336
            +
Sbjct: 293 PY 294

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 70.4 bits (172), Expect = 1e-13
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRPP 301
           VGT  Y+APE+I  + + F+ DWW LG +++EM+ G +PFR    +   E   R +    
Sbjct: 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ 221

Query: 302 DLVGE--PTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
           +   E      +++ R LL K+P +R+     G   +K H  FK +N++ L   +  PP 
Sbjct: 222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPF 281

Query: 354 IP 355
            P
Sbjct: 282 CP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 70.4 bits (172), Expect = 1e-13
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 11/122 (9%)

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS----SRKETFYRILCRP 300
           VGT  Y+APE++  + +  + D+W LG +++EM+ G +PFRG      R+E   R+L   
Sbjct: 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE 221

Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRIGVE-----EIKGHEFFKGVNWELL-LKISRPPN 353
                + +   +++ + LL KDP +R+G +     E+K H FF+ +N++ L   +  PP 
Sbjct: 222 EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPF 281

Query: 354 IP 355
           +P
Sbjct: 282 VP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 69.9 bits (171), Expect = 2e-13
 Identities = 67/319 (21%), Positives = 120/319 (37%), Gaps = 68/319 (21%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA G V+        +  A+K +  D     + E        +Y ++  E  +L+++
Sbjct: 8   LGKGAYGTVYC-GLTNQGQLIAVKQVELDTSNVLAAE-------KEYEKLQEEVDLLKSL 59

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +H  + +  G    D  +   +++ PG  + S+  +       +     Y  +++  + Y
Sbjct: 60  KHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGP--LPEPVFCKYTKQILDGVAY 117

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LHN  +V+RD+K  N+M+  NG I L+DF  + +L+          V    T S + K  
Sbjct: 118 LHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA---------WVGLHGTHSNMLK-- 166

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                                                  S  GT  ++APE+I   G+  
Sbjct: 167 ---------------------------------------SMHGTPYWMAPEVINESGYGR 187

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------LCRPPDLVGEPTPLRNLIRRL 317
             D WS+G  + EM  G  P     R    + I      + R PD         + +   
Sbjct: 188 KSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAI--DFVTSC 245

Query: 318 LEKDPTKRIGVEEIKGHEF 336
           L +D  +R    ++  H+F
Sbjct: 246 LTRDQHERPSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 69.7 bits (170), Expect = 2e-13
 Identities = 75/324 (23%), Positives = 135/324 (41%), Gaps = 71/324 (21%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   LG+GA G V+L  D ++    A+K +  D    +S E +   N      +  E +
Sbjct: 5   RLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFD---PESPETSKEVNA-----LECEIQ 56

Query: 79  VLRNVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSLRKQ-QSEQMFSDDTIRFYAA 135
           +L+N+ H  + +  G L    ++ +   +++ PG    S++ Q +S    +++  R Y  
Sbjct: 57  LLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPG---GSIKDQLKSYGALTENVTRKYTR 113

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           +++  + YLH+  IV+RD+K  NI+    G++ L DF                       
Sbjct: 114 QILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDF----------------------- 150

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
             G  KR   L   C SG  ++                         S  GT  +++PE+
Sbjct: 151 --GASKR---LQTICLSGTGMK-------------------------SVTGTPYWMSPEV 180

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP---TPLRN 312
           I G+G+    D WS+G  + EML    P+         ++I  +P + V  P      R+
Sbjct: 181 ISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRD 240

Query: 313 LIRRLLEKDPTKRIGVEEIKGHEF 336
            ++R+   +   R   +E+  H F
Sbjct: 241 FLKRIF-VEAKLRPSADELLRHTF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 69.4 bits (170), Expect = 3e-13
 Identities = 84/355 (23%), Positives = 136/355 (38%), Gaps = 119/355 (33%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQRVL 80
           +G G  G VF  K+ E+ E  ALK +           L ++D G      R I     +L
Sbjct: 8   IGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALREIC----LL 53

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLH----SLRKQQSEQMFSDDTIRFYAAE 136
           + ++H  + RL  VL +DK +    +YC  +DL     S       +      ++ +  +
Sbjct: 54  KELKHKNIVRLYDVLHSDKKLTLVFEYC-DQDLKKYFDSCNGDIDPE-----IVKSFMFQ 107

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           L+  L + H+  +++RDLKP+N++I +NG + L DF L+                     
Sbjct: 108 LLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLA--------------------- 146

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                 R+F       GI               P R  S         V T  Y  P+++
Sbjct: 147 ------RAF-------GI---------------PVRCYSAE-------VVTLWYRPPDVL 171

Query: 257 EG-KGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETF---YRILCRP----------- 300
            G K +  ++D WS G +  E+     P F G+   +     +R+L  P           
Sbjct: 172 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231

Query: 301 PDLVGEPTPL------------------RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           PD    P P+                  R+L++ LL  +P +RI  EE   H +F
Sbjct: 232 PDYK--PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 68.3 bits (167), Expect = 4e-13
 Identities = 79/315 (25%), Positives = 122/315 (38%), Gaps = 95/315 (30%)

Query: 32  VFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL 91
           V LV D  + ++F LK +      +KS E +        R       V      P +  L
Sbjct: 9   VLLVMDTRTQQTFILKGL------RKSSEYSRE------RLTIIPHCV------PNMVCL 50

Query: 92  RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVY 151
              + ++  V   + +  G  L S   +       ++ ++ +AAE+V+AL+ LH  GIV 
Sbjct: 51  HKYIVSEDSVFLVLQHAEGGKLWSHISKFLN--IPEECVKRWAAEMVVALDALHREGIVC 108

Query: 152 RDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCS 211
           RDL P         +I+L                        + R  I+     L+ F  
Sbjct: 109 RDLNP--------NNILL------------------------DDRGHIQ-----LTYFSR 131

Query: 212 SGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLG 271
               +ED               D ++ E          Y APE+        A DWWSLG
Sbjct: 132 -WSEVED-------------SCDGEAVENM--------YCAPEVGGISEETEACDWWSLG 169

Query: 272 VVLHEMLYGATPFR----GSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRI- 326
            +L E+L G T       G +   T        P+ V E    R+L+++LL+ +PT+R+ 
Sbjct: 170 AILFELLTGKTLVECHPSGINTHTTL-----NIPEWVSEEA--RSLLQQLLQFNPTERLG 222

Query: 327 ----GVEEIKGHEFF 337
               GVE+IK H FF
Sbjct: 223 AGVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 68.5 bits (167), Expect = 4e-13
 Identities = 75/326 (23%), Positives = 136/326 (41%), Gaps = 75/326 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   LGRGA G V+L  D ++    A+K +  D     S+E +   N      +  E +
Sbjct: 5   RLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFD---PDSQETSKEVNA-----LECEIQ 56

Query: 79  VLRNVEHPLLPRLRGVLS--TDKFVGYAIDYCPGRDLHSLRKQ-QSEQMFSDDTIRFYAA 135
           +L+N+ H  + +  G L    +K +   ++Y PG    S++ Q ++    +++  R Y  
Sbjct: 57  LLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPG---GSIKDQLKAYGALTENVTRRYTR 113

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           +++  + YLH+  IV+RD+K  NI+    G++ L DF                       
Sbjct: 114 QILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDF----------------------- 150

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
             G  KR   +   C SG  ++                         S  GT  +++PE+
Sbjct: 151 --GASKR---IQTICMSGTGIK-------------------------SVTGTPYWMSPEV 180

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
           I G+G+    D WS+   + EML    P+         ++I  +P     PD V +    
Sbjct: 181 ISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDAC-- 238

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
           R+ ++++  ++  +R   E +  H F
Sbjct: 239 RDFLKQIFVEE-KRRPTAEFLLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 69.0 bits (169), Expect = 6e-13
 Identities = 77/358 (21%), Positives = 130/358 (36%), Gaps = 100/358 (27%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR----RISF---- 75
           LG G  G V    D  + +  A+K +       K  E++N+   D+       I F    
Sbjct: 17  LGEGTYGKVEKAYDTLTGKIVAIKKV-------KIIEISNDVTKDRQLVGMCGIHFTTLR 69

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQ-QSEQMFSDDTIRFYA 134
           E +++  ++H  +  L  V     F+   +D         L+K    +   ++  ++   
Sbjct: 70  ELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMAS----DLKKVVDRKIRLTESQVKCIL 125

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
            +++  L  LH    ++RDL P NI I   G   + DF L+ +         P      +
Sbjct: 126 LQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRY------GYPPYSDTLS 179

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
               +++R    SK                                    V T  Y APE
Sbjct: 180 KDETMQRREEMTSK------------------------------------VVTLWYRAPE 203

Query: 255 IIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT----- 308
           ++ G + + FAVD WS+G +  E+L G   F G +  +   RI     +L+G P      
Sbjct: 204 LLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIF----ELLGTPNEDNWP 259

Query: 309 -----PLR-----------------------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                PL                        +L++ LL+ +P +RI  +E   HE+FK
Sbjct: 260 QAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317

Length = 335

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 68.6 bits (168), Expect = 6e-13
 Identities = 82/351 (23%), Positives = 132/351 (37%), Gaps = 118/351 (33%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           L ++  LGRGA GVV  ++ V +    A+K I   +  ++ K L  + +      IS   
Sbjct: 3   LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLD------IS--- 53

Query: 78  RVLRNVEHPLLPRLRGVL---------------STDKFVGYAIDYCPGRDLHSLRKQQSE 122
             +R+V+ P      G L               S DKF                +K   +
Sbjct: 54  --MRSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKF---------------YKKVYDK 96

Query: 123 QMF-SDDTIRFYAAELVLALEYLH-NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS- 179
            +   +D +   A  +V ALEYLH  + +++RD+KP N++I  NG + L DF +S  L  
Sbjct: 97  GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156

Query: 180 --PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDS 237
              KT  A  K  +A                               RI P+         
Sbjct: 157 SVAKTIDAGCKPYMAPE-----------------------------RINPE--------- 178

Query: 238 SEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
                             +  KG+D   D WSLG+ + E+  G  P+   S K  F ++ 
Sbjct: 179 ------------------LNQKGYDVKSDVWSLGITMIELATGRFPY--DSWKTPFQQL- 217

Query: 298 CRPPDLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                +V EP+P           ++ + + L+K+  +R    E+  H FF+
Sbjct: 218 ---KQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFE 265

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 70.0 bits (171), Expect = 6e-13
 Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 27/236 (11%)

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIV--YRDLKPEN--IMIQENGHIMLVDFDLSTKLS 179
           M +D+    YA   +  L    + GIV  + D K ++  ++I E G       DL+ ++ 
Sbjct: 102 MLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS----GGDLNKQIK 157

Query: 180 PKTPQASP-----------KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPD 228
            +  +  P           + VLA +    +  R+       S+ I L  P    ++G  
Sbjct: 158 QRLKEHLPFQEYEVGLLFYQIVLALDE---VHSRKMMHRDLKSANIFLM-PTGIIKLGDF 213

Query: 229 PPSR--SDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRG 286
             S+  SDS S + ++SF GT  Y+APE+ E K +    D WSLGV+L+E+L    PF+G
Sbjct: 214 GFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG 273

Query: 287 SSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
            S++E   ++L     P      + ++ L+  LL K+P  R   +++   EF K V
Sbjct: 274 PSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329

Length = 478

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 68.9 bits (169), Expect = 7e-13
 Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 25/165 (15%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISF 75
           + +S +G GA G V    D ++    A+K + R     I  K              R   
Sbjct: 18  QNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAK--------------RTYR 63

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVG-----YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           E R+L++++H  +  L  V +    +      Y + +  G DL+++ K Q     SDD I
Sbjct: 64  ELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQK---LSDDHI 120

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +F   +++  L+Y+H+ GI++RDLKP NI + E+  + ++DF L+
Sbjct: 121 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA 165

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 70.3 bits (172), Expect = 7e-13
 Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 74/297 (24%)

Query: 39  ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL--RGVLS 96
            +    A+K++ R    ++  +        ++RR   E  +   + HP +  L   G  +
Sbjct: 1   MTGHEVAIKLL-RTDAPEEEHQRA------RFRR---ETALCARLYHPNIVALLDSGE-A 49

Query: 97  TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKP 156
               +    +Y PGR L  +       + + +T R    +++ AL   HN GIV+RDLKP
Sbjct: 50  PPGLLFAVFEYVPGRTLREVLAADG-ALPAGETGRL-MLQVLDALACAHNQGIVHRDLKP 107

Query: 157 ENIMIQENG---HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSG 213
           +NIM+ + G   H  ++DF + T L P    A   T+    TR+                
Sbjct: 108 QNIMVSQTGVRPHAKVLDFGIGT-LLPGVRDADVATL----TRTT--------------- 147

Query: 214 ISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVV 273
                                          +GT  Y APE + G+      D ++ G++
Sbjct: 148 -----------------------------EVLGTPTYCAPEQLRGEPVTPNSDLYAWGLI 178

Query: 274 LHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT-----PLRNLIRRLLEKDPTKR 325
             E L G    +G+S  E  Y+ L   P  V  P      PL  ++R+ L KDP +R
Sbjct: 179 FLECLTGQRVVQGASVAEILYQQL--SPVDVSLPPWIAGHPLGQVLRKALNKDPRQR 233

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 67.8 bits (166), Expect = 7e-13
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
           S  +  ++S VGT  Y++PE I   G++F  D WSLG +L+EM    +PF G   K   Y
Sbjct: 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD--KMNLY 214

Query: 295 RIL-----CRPPDLVGE--PTPLRNLIRRLLEKDPTKRIGVEEI 331
            +      C  P L  +     LR+L+ R +  DP KR  +  +
Sbjct: 215 SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 68.9 bits (169), Expect = 8e-13
 Identities = 79/367 (21%), Positives = 127/367 (34%), Gaps = 129/367 (35%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           + +S +G GA G+V       +    A+K I                    +   +F QR
Sbjct: 8   QNLSYIGEGAYGMVCSATHKPTGVKVAIKKI------------------SPFEHQTFCQR 49

Query: 79  VLRNVEHPLLPR--------LRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFS 126
            LR  E  +L R        +  ++    F      Y +      DL+ L K Q     S
Sbjct: 50  TLR--EIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ---HLS 104

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           +D I+++  +++  L+Y+H+  +++RDLKP N+++  N  + + DF L+           
Sbjct: 105 NDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLAR---------- 154

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
                                            +  P          + D +     +V 
Sbjct: 155 ---------------------------------IADP----------EHDHTGFLTEYVA 171

Query: 247 TEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           T  Y APEI +  KG+  A+D WS+G +L EML     F G         IL     ++G
Sbjct: 172 TRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLIL----GVLG 227

Query: 306 EPT-------------------------PLRNLIRR-------LLEK----DPTKRIGVE 329
            P+                         P   L          LL+K    +P KRI VE
Sbjct: 228 TPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVE 287

Query: 330 EIKGHEF 336
           E   H +
Sbjct: 288 EALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 67.4 bits (164), Expect = 1e-12
 Identities = 71/334 (21%), Positives = 134/334 (40%), Gaps = 92/334 (27%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
             ++  +G G  G V+  ++V + E  A+KVI               + G+ +  +  E 
Sbjct: 11  FELIQRIGSGTYGDVYKARNVNTGELAAIKVI-------------KLEPGEDFAVVQQEI 57

Query: 78  RVLRNVEHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
            ++++ +H  ++      L  DK +   +++C G  L  +         S+  I + + E
Sbjct: 58  IMMKDCKHSNIVAYFGSYLRRDK-LWICMEFCGGGSLQDIYHVTGP--LSESQIAYVSRE 114

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
            +  L YLH+ G ++RD+K  NI++ +NGH+ L DF +S +++                 
Sbjct: 115 TLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQIT----------------- 157

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI- 255
           + I KR+                                       SF+GT  ++APE+ 
Sbjct: 158 ATIAKRK---------------------------------------SFIGTPYWMAPEVA 178

Query: 256 -IEGK-GHDFAVDWWSLGVVLHEM------LYGATPFRG--SSRKETFYRILCRPP---D 302
            +E K G++   D W++G+   E+      ++   P R      K  F     +PP   D
Sbjct: 179 AVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNF-----QPPKLKD 233

Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
            +       + ++  L K+P KR   E++  H F
Sbjct: 234 KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 69.0 bits (168), Expect = 2e-12
 Identities = 95/346 (27%), Positives = 143/346 (41%), Gaps = 86/346 (24%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVI-WRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++  +G G  G VFLVK   + E F  K I +R L E++  +L              E  
Sbjct: 17  VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLV------------IEVN 64

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYA-------IDYCPGRDLHSLRKQQSEQMF---SDD 128
           V+R ++H  + R       D+F+  A       +++C   DL S   Q+  +MF    + 
Sbjct: 65  VMRELKHKNIVRY-----IDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEH 118

Query: 129 TIRFYAAELVLALEYLHNMG-------IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK 181
            I     +L+ AL Y HN+        +++RDLKP+NI              LST +   
Sbjct: 119 AIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF-------------LSTGI--- 162

Query: 182 TPQASPKTVLAANTRSG--IKKRRSF-LSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS 238
             +   K    AN  +G  I K   F LSK     I +E   HS                
Sbjct: 163 --RHIGKITAQANNLNGRPIAKIGDFGLSK----NIGIESMAHS---------------- 200

Query: 239 EKSNSFVGTEEYVAPEII--EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI 296
                 VGT  Y +PE++  E K +D   D W+LG +++E+  G TPF  ++        
Sbjct: 201 -----CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISE 255

Query: 297 LCRPPDL--VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
           L R PDL   G+   L  LI+ LL     +R    +  G++  K V
Sbjct: 256 LKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301

Length = 1021

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 66.4 bits (162), Expect = 3e-12
 Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 10/163 (6%)

Query: 24  LGRGAKGVVFLVKDVESSESF-ALKVI-WRDLIEKKSKELTNNDNGDKYRRISFEQRVLR 81
           LG GA G V+ V+   + ++  ALK I   +    K K   +   GD    ++  +  LR
Sbjct: 8   LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67

Query: 82  NVEHPLLPRLRGV-LSTDKF--VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
              HP + R     L  D+   V   I+  P  +  +  K++ +Q F+++ I     ++V
Sbjct: 68  ---HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMV 123

Query: 139 LALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
           LAL YLH    IV+RDL P NIM+ E+  + + DF L+ +  P
Sbjct: 124 LALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQP 166

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 66.3 bits (162), Expect = 3e-12
 Identities = 76/350 (21%), Positives = 138/350 (39%), Gaps = 109/350 (31%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G    V+  ++  + E  ALK I  D     ++E T +      R IS    +++ +
Sbjct: 8   LGEGTYATVYKGRNRTTGEIVALKEIHLD-----AEEGTPST---AIREIS----LMKEL 55

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFYAAELVLALE 142
           +H  + RL  V+ T+  +    +Y    DL         +   D +T++ +  +L+  + 
Sbjct: 56  KHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIA 114

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           + H   +++RDLKP+N++I + G + L DF L+                           
Sbjct: 115 FCHENRVLHRDLKPQNLLINKRGELKLADFGLA--------------------------- 147

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG-KGH 261
           R+F       GI    PV             ++ S+E     V T  Y AP+++ G + +
Sbjct: 148 RAF-------GI----PV-------------NTFSNE-----VVTLWYRAPDVLLGSRTY 178

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT------------- 308
             ++D WS+G ++ EM+ G   F G++ ++   +I      ++G PT             
Sbjct: 179 STSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIF----RIMGTPTESTWPGISQLPEY 234

Query: 309 ----------PLRNLI-----------RRLLEKDPTKRIGVEEIKGHEFF 337
                      L+ L             RLL+ +P  RI   +   H +F
Sbjct: 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 66.4 bits (162), Expect = 3e-12
 Identities = 85/356 (23%), Positives = 135/356 (37%), Gaps = 112/356 (31%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
           V  +G G  GVV+  +D  ++E+ ALK I           L   D G      R IS   
Sbjct: 7   VEKIGEGTYGVVYKARDRVTNETIALKKI----------RLEQEDEGVPSTAIREISL-- 54

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD--TIRFYAA 135
             L+ ++H  + RL+ V+ ++K +    +Y    DL   +   S   F+ +   I+ Y  
Sbjct: 55  --LKEMQHGNIVRLQDVVHSEKRLYLVFEYL---DLDLKKHMDSSPDFAKNPRLIKTYLY 109

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
           +++  + Y H+  +++RDLKP+N++I +    + L DF L+                   
Sbjct: 110 QILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA------------------- 150

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                   R+F       GI +    H                       V T  Y APE
Sbjct: 151 --------RAF-------GIPVRTFTHE----------------------VVTLWYRAPE 173

Query: 255 IIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---------------- 297
           I+ G  H    VD WS+G +  EM+     F G S  +  ++I                 
Sbjct: 174 ILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233

Query: 298 ----------CRPPDLVG-----EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                       P DL       EP  + +L+ ++L  DP+KRI       HE+FK
Sbjct: 234 LPDYKSAFPKWPPKDLATVVPTLEPAGV-DLLSKMLRLDPSKRITARAALEHEYFK 288

Length = 294

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 66.2 bits (161), Expect = 4e-12
 Identities = 78/335 (23%), Positives = 132/335 (39%), Gaps = 89/335 (26%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  +G+G  G VF V + ++    A+K++  D I    +E            I  E  +
Sbjct: 22  IIETIGKGTYGKVFKVLNKKNGSKAAVKIL--DPIHDIDEE------------IEAEYNI 67

Query: 80  LRNV-EHPLLPRLRGVL-STDKFVG----YAIDYCPGRDLHSLRK---QQSEQMFSDDTI 130
           L+ + +HP + +  G+    D   G      ++ C G  +  L K   ++ E+M  +  I
Sbjct: 68  LKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERM-EEPII 126

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +   E ++ L++LH    ++RD+K  NI++   G + LVDF +S +L+           
Sbjct: 127 AYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT----------- 175

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
              +TR     RR                                      N+ VGT  +
Sbjct: 176 ---STR----LRR--------------------------------------NTSVGTPFW 190

Query: 251 VAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           +APE+I         +D   D WSLG+   E+  G  P          ++I   PP  + 
Sbjct: 191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLH 250

Query: 306 EP----TPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
           +P        + IR+ L KD  KR  V ++  H F
Sbjct: 251 QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 65.6 bits (161), Expect = 4e-12
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 20/164 (12%)

Query: 18  LRIVSALGRGAKGVVFL----VKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           L +   LG GA G V+      K        A+K +  D  E++ +E             
Sbjct: 1   LTLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLR---------- 50

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHSLRKQQSEQMFSDDTIR 131
             E R++R ++HP + +L GV + ++     I  +Y PG DL    ++   +  S   + 
Sbjct: 51  --EARIMRKLDHPNIVKLLGVCTEEE--PLMIVMEYMPGGDLLDYLRKNRPKELSLSDLL 106

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +A ++   +EYL +   ++RDL   N ++ EN  + + DF LS
Sbjct: 107 SFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLS 150

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 66.0 bits (161), Expect = 5e-12
 Identities = 82/340 (24%), Positives = 126/340 (37%), Gaps = 93/340 (27%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G V+  +DV ++E  A+K +      K+S E        K++ I  E R L+ +
Sbjct: 23  IGHGSFGAVYFARDVRTNEVVAIKKM--SYSGKQSNE--------KWQDIIKEVRFLQQL 72

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            HP     +G    +      ++YC G   D+  + K+       +  I       +  L
Sbjct: 73  RHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKP----LQEVEIAAICHGALQGL 128

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
            YLH+   ++RD+K  NI++ E                                  G  K
Sbjct: 129 AYLHSHERIHRDIKAGNILLTEP---------------------------------GTVK 155

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII----E 257
               L+ F S+  SL  P                     +NSFVGT  ++APE+I    E
Sbjct: 156 ----LADFGSA--SLVSP---------------------ANSFVGTPYWMAPEVILAMDE 188

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTPLRNLI 314
           G+ +D  VD WSLG+   E+     P    +     Y I     P L         RN +
Sbjct: 189 GQ-YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFV 247

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI 354
              L+K P  R   EE+  H F         +   RPP +
Sbjct: 248 DSCLQKIPQDRPSSEELLKHRF---------VLRERPPTV 278

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 65.4 bits (159), Expect = 6e-12
 Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
            R    LG+G  G V   +   + + +A K + +  I+K+  E    +          E+
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALN----------EK 51

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           ++L  V    +  L     T   +   +    G DL           F ++   FYAAE+
Sbjct: 52  QILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEI 111

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
           +  LE LH    VYRDLKPENI++ + GHI + D  L+ K+
Sbjct: 112 LCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 65.2 bits (159), Expect = 7e-12
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 12/161 (7%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE-LTNNDNGDKYRRISFEQ 77
           R    LG+G  G V   +   + + +A K + +  I+K+  E +  N           E+
Sbjct: 3   RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN-----------EK 51

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           ++L  V    +  L     T   +   +    G DL           F ++   FYAAE+
Sbjct: 52  QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEI 111

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
              LE LH   IVYRDLKPENI++ + GHI + D  L+ ++
Sbjct: 112 TCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 65.2 bits (160), Expect = 7e-12
 Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 26/171 (15%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVI------WRDLIEKKSKELTNNDNGDKYRRI 73
           ++  LG G  G V+L ++ E+ E  A+K +      W + +  +                
Sbjct: 3   VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLR---------------- 46

Query: 74  SFEQRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
             E + LR + EHP + +L+ V   +  + +  +Y  G +L+ L K +  + FS+  IR 
Sbjct: 47  --EVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRS 103

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
              +++  L ++H  G  +RDLKPEN+++     + + DF L+ ++  + P
Sbjct: 104 IIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 65.4 bits (159), Expect = 7e-12
 Identities = 76/348 (21%), Positives = 128/348 (36%), Gaps = 86/348 (24%)

Query: 8   RPIRSLDFSCLR-------IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
           R +  +D S LR       +V  +G G  G V+  + V++ +  A+KV+  D+ E + +E
Sbjct: 1   RSLDDIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVM--DVTEDEEEE 58

Query: 61  LTNNDNGDK----YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL 116
           +    N  K    +R I+           P           D  +   +++C    +  L
Sbjct: 59  IKLEINMLKKYSHHRNIATYYGAFIKKSPP---------GHDDQLWLVMEFCGAGSVTDL 109

Query: 117 RKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
            K        +D I +   E++  L +LH   +++RD+K +N+++ EN  + LVDF +S 
Sbjct: 110 VKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169

Query: 177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD 236
           +L         +TV   NT                                         
Sbjct: 170 QLD--------RTVGRRNT----------------------------------------- 180

Query: 237 SSEKSNSFVGTEEYVAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE 291
                  F+GT  ++APE+I         +D+  D WSLG+   EM  GA P        
Sbjct: 181 -------FIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR 233

Query: 292 TFYRILCRPPDLVGE---PTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
             + I   PP  +          + I   L K+   R   E++  H F
Sbjct: 234 ALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 65.9 bits (161), Expect = 8e-12
 Identities = 89/392 (22%), Positives = 148/392 (37%), Gaps = 116/392 (29%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNN--DNGDKYRRISFEQRVLR 81
           +GRGA G+V   K+ E++E  A+K I              N  DN    +R   E ++LR
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKI-------------ANAFDNRIDAKRTLREIKLLR 59

Query: 82  NVEHPLLPRLRGVL---STDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           +++H  +  ++ ++     + F    I Y     DLH + +  S Q  SDD  +++  +L
Sbjct: 60  HLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIR--SSQTLSDDHCQYFLYQL 117

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
           +  L+Y+H+  +++RDLKP N+++  N        DL                       
Sbjct: 118 LRGLKYIHSANVLHRDLKPSNLLLNANC-------DL----------------------- 147

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE-II 256
                     K C  G++                R+ S+  +    +V T  Y APE ++
Sbjct: 148 ----------KICDFGLA----------------RTTSEKGDFMTEYVVTRWYRAPELLL 181

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRG--------------------------SSRK 290
               +  A+D WS+G +  E+L     F G                          + + 
Sbjct: 182 NCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241

Query: 291 ETFYRILCRPP-----DLVGEPTPLR-NLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL 344
             + R L   P      L     PL  +L+ ++L  DP+KRI VEE   H +        
Sbjct: 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL-----AS 296

Query: 345 LLKISRPPNIPARFEHENNESDGRGRDGTKEI 376
           L   S  P     F   + E D    +  KE+
Sbjct: 297 LHDPSDEPVCQTPFSF-DFEEDALTEEDIKEL 327

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 65.0 bits (158), Expect = 9e-12
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 11/121 (9%)

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PDLV 304
           GT  Y+APEI++ + + + VDW+++G  ++EM+ G TPF+    K     +  R   D V
Sbjct: 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV 215

Query: 305 -----GEPTPLRNLIRRLLEKDPTKRIGVEEI----KGHEFFKGVNWELL-LKISRPPNI 354
                      +++ R  L K P  R+G  E     + HEFFK +N+  L   +  PP +
Sbjct: 216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFV 275

Query: 355 P 355
           P
Sbjct: 276 P 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 64.6 bits (157), Expect = 1e-11
 Identities = 72/299 (24%), Positives = 113/299 (37%), Gaps = 87/299 (29%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
           V+ +G GA G V+  +D  S    ALK          S  +  N++G      R ++  +
Sbjct: 5   VAEIGVGAYGTVYKARDPHSGHFVALK----------SVRVQTNEDGLPLSTVREVALLK 54

Query: 78  RVLRNVEHPLLPRLRGVLSTDK--------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           R L   +HP + RL  V +T +         V   +D    +DL +   +        +T
Sbjct: 55  R-LEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD----QDLRTYLDKVPPPGLPAET 109

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           I+    + +  L++LH   IV+RDLKPENI++   G + L DF                 
Sbjct: 110 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFG---------------- 153

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                           L++  S  ++L  PV                        V T  
Sbjct: 154 ----------------LARIYSCQMAL-TPV------------------------VVTLW 172

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APE++    +   VD WS+G +  EM      F G+S  +     L +  DL+G P 
Sbjct: 173 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ----LGKIFDLIGLPP 227

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 65.8 bits (160), Expect = 1e-11
 Identities = 85/377 (22%), Positives = 142/377 (37%), Gaps = 126/377 (33%)

Query: 5   VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNN 64
           +N  P +S      ++ + +G G+ GVV+    +++SE  A+K + +D  + K++EL   
Sbjct: 60  INRSPNKSY-----KLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIM 113

Query: 65  DN---------GDKYRRISF---EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRD 112
            N          D Y    F   E+ +  NV    +P+     +  K++           
Sbjct: 114 KNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-----TVHKYMK---------- 158

Query: 113 LHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM-LVD 171
            H  R   +  +F    ++ Y+ +L  AL Y+H+  I +RDLKP+N++I  N H + L D
Sbjct: 159 -HYARNNHALPLF---LVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCD 214

Query: 172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPS 231
           F             S K +LA                                       
Sbjct: 215 F------------GSAKNLLAG-------------------------------------- 224

Query: 232 RSDSDSSEKSNSFVGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRK 290
                  ++S S++ +  Y APE++ G   +   +D WSLG ++ EM+ G   F G S  
Sbjct: 225 -------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV 277

Query: 291 ETFYRIL-------------------------CRPPDL-----VGEPTPLRNLIRRLLEK 320
           +   RI+                          +P DL      G P    N I + L+ 
Sbjct: 278 DQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKY 337

Query: 321 DPTKRIGVEEIKGHEFF 337
           +P KR+   E     FF
Sbjct: 338 EPLKRLNPIEALADPFF 354

Length = 440

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 65.2 bits (159), Expect = 1e-11
 Identities = 87/382 (22%), Positives = 136/382 (35%), Gaps = 134/382 (35%)

Query: 3   DVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKV---IWRDLIEKKSK 59
           DV  DRPI              G GA GVV+ V D    +  ALK    ++++L+  K  
Sbjct: 1   DVEPDRPI--------------GYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCK-- 44

Query: 60  ELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST---DKFVG-YAIDYCPGRDLHS 115
                       R+  E ++L   +H  +     +L     D F   Y +      DLH 
Sbjct: 45  ------------RVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHK 92

Query: 116 LRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +    S Q  S D ++ +  +++  L+YLH+ GI++RD+KP N+++  N  + + DF L+
Sbjct: 93  I--IVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLA 150

Query: 176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDS 235
                                                   +E+P                
Sbjct: 151 ---------------------------------------RVEEP---------------- 155

Query: 236 DSSEKSNSFVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
           D S+     V T+ Y APEI+ G  H   AVD WS+G +  E+L     F+  S  +   
Sbjct: 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLD 215

Query: 295 RILCRPPDLVGEPT----------------------PLR---------------NLIRRL 317
            I     DL+G P+                      P                 +L+ R+
Sbjct: 216 LIT----DLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRM 271

Query: 318 LEKDPTKRIGVEEIKGHEFFKG 339
           L  DP KRI   +   H +   
Sbjct: 272 LVFDPDKRISAADALAHPYLDE 293

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 65.7 bits (160), Expect = 2e-11
 Identities = 78/324 (24%), Positives = 127/324 (39%), Gaps = 89/324 (27%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDL-------IEKKSKELTNNDNGDKYRR 72
           I   LG GA G V   K V   E FA+KV+  D+         +   E+    N D +  
Sbjct: 36  ISRVLGSGATGTVLCAKRVSDGEPFAVKVV--DMEGMSEADKNRAQAEVCCLLNCDFFSI 93

Query: 73  IS----FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--QMFS 126
           +     F ++  RN E+ L+            +   +DY    DL    K +++  + F 
Sbjct: 94  VKCHEDFAKKDPRNPENVLM------------IALVLDYANAGDLRQEIKSRAKTNRTFR 141

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           +        +++LA+ ++H+  +++RD+K  NI++  NG + L DF  S           
Sbjct: 142 EHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSK---------- 191

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
               + A T S    R                                        +F G
Sbjct: 192 ----MYAATVSDDVGR----------------------------------------TFCG 207

Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-----RPP 301
           T  YVAPEI   K +    D +SLGV+L+E+L    PF G + +E  ++ L       PP
Sbjct: 208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPP 267

Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
            +  E   ++ ++  LL  DP +R
Sbjct: 268 SISPE---MQEIVTALLSSDPKRR 288

Length = 496

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 79/360 (21%), Positives = 129/360 (35%), Gaps = 128/360 (35%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRVLRN 82
           +G G+ G+V   K  E+ +  A+K           K L + D+    ++I+  E R+L+ 
Sbjct: 9   VGEGSYGMVMKCKHKETGQIVAIK-----------KFLESEDD-KMVKKIAMREIRMLKQ 56

Query: 83  VEHPLLPRLRGVLSTDK-------FVGYAI-----DYCPGRDLHSLRKQQSEQMFSDDTI 130
           + H  L  L  V    K       FV + +      Y  G D   +RK            
Sbjct: 57  LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRK------------ 104

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
             Y  +++  +E+ H+  I++RD+KPENI++ ++G                         
Sbjct: 105 --YLFQILRGIEFCHSHNIIHRDIKPENILVSQSG------------------------- 137

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
                          + K C  G +                R+ +   E    +V T  Y
Sbjct: 138 ---------------VVKLCDFGFA----------------RTLAAPGEVYTDYVATRWY 166

Query: 251 VAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL------------ 297
            APE++ G   +  AVD W++G ++ EML G   F G S  +  Y I+            
Sbjct: 167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE 226

Query: 298 --CRPPDLVG-------EPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFF 337
              + P   G       E  PL            +L ++ L  DP  R    ++  HEFF
Sbjct: 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 63.7 bits (156), Expect = 2e-11
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS-----KELTNNDNGDKYRR 72
           L +   LG GA G V+             K   +    KK      K L  + +  +   
Sbjct: 1   LTLGKKLGEGAFGEVY-------------KGKLKGKGGKKKVEVAVKTLKEDASEQQIEE 47

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSDDTIR 131
              E R++R ++HP + +L GV + ++ + Y + +Y  G DL S  ++   ++   D + 
Sbjct: 48  FLREARIMRKLDHPNVVKLLGVCTEEEPL-YIVMEYMEGGDLLSYLRKNRPKLSLSDLLS 106

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           F A ++   +EYL +   ++RDL   N ++ EN  + + DF LS
Sbjct: 107 F-ALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLS 149

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 64.0 bits (155), Expect = 2e-11
 Identities = 71/334 (21%), Positives = 123/334 (36%), Gaps = 85/334 (25%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
             +V  +G G  G V+  + V++ +  A+KV+              +  GD+   I  E 
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVM--------------DVTGDEEEEIKQEI 53

Query: 78  RVLRNVEHPL-LPRLRGVL------STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
            +L+   H   +    G          D  +   +++C    +  L K        ++ I
Sbjct: 54  NMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI 113

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +   E++  L +LH   +++RD+K +N+++ EN  + LVDF +S +L         +TV
Sbjct: 114 AYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD--------RTV 165

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
              NT                                                F+GT  +
Sbjct: 166 GRRNT------------------------------------------------FIGTPYW 177

Query: 251 VAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PDLV 304
           +APE+I         +DF  D WSLG+   EM  GA P          + I   P P L 
Sbjct: 178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLK 237

Query: 305 GE--PTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
            +      ++ I   L K+ ++R   E++  H F
Sbjct: 238 SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 10/106 (9%)

Query: 240 KSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
           K NS VGT  ++APE+I+ K +   VD WSLG++  EM  G  P+         + I  +
Sbjct: 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK 231

Query: 300 -PPDLVGEPTP------LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
             P L     P       ++ + + L KDP KR   EE+  H F K
Sbjct: 232 GIPPL---KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 62.7 bits (152), Expect = 5e-11
 Identities = 78/336 (23%), Positives = 126/336 (37%), Gaps = 87/336 (25%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  +G+G  G V+ V + +     A+K++  D I    +E            I  E  +
Sbjct: 26  IIETIGKGTYGKVYKVTNKKDGSLAAVKIL--DPISDVDEE------------IEAEYNI 71

Query: 80  LRNV-EHPLLPRLRGVL-STDKFVG----YAIDYCPGRDLHSLRKQ--QSEQMFSDDTIR 131
           L+++  HP + +  G+    DK VG      ++ C G  +  L K      Q   +  I 
Sbjct: 72  LQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMIS 131

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           +     +L L++LHN  I++RD+K  NI++   G + LVDF +S +L+         T L
Sbjct: 132 YILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT--------STRL 183

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
             NT  G                                                T  ++
Sbjct: 184 RRNTSVG------------------------------------------------TPFWM 195

Query: 252 APEIIEGK-----GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
           APE+I  +      +D   D WSLG+   E+  G  P       +T ++I   PP  +  
Sbjct: 196 APEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLH 255

Query: 307 PTP----LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P        + I + L KD   R  V  +  H F K
Sbjct: 256 PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 62.8 bits (152), Expect = 5e-11
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 2/104 (1%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
           +D+  K N+FVGT  ++APE+I+   +DF  D WSLG+   E+  G  P          +
Sbjct: 152 TDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF 211

Query: 295 RI-LCRPPDLVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
            I    PP L G+ + P +  +   L KDP  R   +E+  H+F
Sbjct: 212 LIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 62.3 bits (152), Expect = 7e-11
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 6/110 (5%)

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK 290
           ++     S  + ++VGT  Y++PE +    +D   D WSLG +++E+   + PF   ++ 
Sbjct: 157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL 216

Query: 291 ETFYRI---LCRP-PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
           +   +I     R  P        L  +I+ +L  DP KR   EE+     
Sbjct: 217 QLASKIKEGKFRRIPYRYSS--ELNEVIKSMLNVDPDKRPSTEELLQLPL 264

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 62.2 bits (151), Expect = 8e-11
 Identities = 69/338 (20%), Positives = 119/338 (35%), Gaps = 91/338 (26%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           + ++  LG+G  G V+ V    +  + A+K I  +L E K            + +I  E 
Sbjct: 3   IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESK------------FNQIIMEL 50

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFYAAE 136
            +L     P +    G    +  V   ++Y     L  L            D +R     
Sbjct: 51  DILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYA 110

Query: 137 LVLALEYL---HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
           +V  L++L   HN  I++RD+KP N+++  NG +                          
Sbjct: 111 VVKGLKFLKEEHN--IIHRDVKPTNVLVNGNGQV-------------------------- 142

Query: 194 NTRSGIKKRRSFLSKFCSSGIS--LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                         K C  G+S  L                    S  K+N  +G + Y+
Sbjct: 143 --------------KLCDFGVSGNLVA------------------SLAKTN--IGCQSYM 168

Query: 252 APEIIEGKG------HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCR--PP 301
           APE I+  G      +    D WSLG+ + EM  G  P+   +    F ++  +    PP
Sbjct: 169 APERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP 228

Query: 302 DLVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            L    +   ++ + + L K P +R    ++  H +  
Sbjct: 229 TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLV 266

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 61.8 bits (151), Expect = 8e-11
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 15/167 (8%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           L +   LG GA G V+        E    KV     + K  KE  + +      R  F +
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKV----AV-KTLKEGASEEE-----REEFLE 50

Query: 78  --RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYA 134
              +++ + HP + RL GV +  + +    +Y PG DL   LRK   +    D  ++  A
Sbjct: 51  EASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKD-LLQM-A 108

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK 181
            ++   +EYL +   V+RDL   N ++ EN  + + DF LS  +   
Sbjct: 109 LQIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYED 155

Length = 258

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 76/328 (23%), Positives = 128/328 (39%), Gaps = 74/328 (22%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           L  +  +G G  G V+ ++  ++    A+K + R              N ++ +RI  + 
Sbjct: 17  LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRR------------TGNKEENKRILMDL 64

Query: 78  RV-LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
            V L++ + P + +  G   TD  V   ++      L  L K+  +    +D +      
Sbjct: 65  DVVLKSHDCPYIVKCYGYFITDSDVFICME-LMSTCLDKLLKR-IQGPIPEDILGKMTVA 122

Query: 137 LVLALEYL-HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           +V AL YL    G+++RD+KP NI++  +G++ L DF +S +L              A T
Sbjct: 123 IVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK----------AKT 172

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
           R          S  C++ ++ E      RI P  P                  +Y     
Sbjct: 173 R----------SAGCAAYMAPE------RIDPPDP----------------NPKY----- 195

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILC-RPPDLVGEP--TPL- 310
                 D   D WSLG+ L E+  G  P++    + E   +IL   PP L      +P  
Sbjct: 196 ------DIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDF 249

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            + +   L KD  KR    E+  H F +
Sbjct: 250 CSFVDLCLTKDHRKRPKYRELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 15/161 (9%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRV 79
           +S +G G+ GVVF  ++ E+ +  A+K            +   +++    ++I+  E R+
Sbjct: 6   LSKIGEGSYGVVFKCRNRETGQIVAIK------------KFVESEDDPVIKKIALREIRM 53

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L+ ++HP L  L  V    + +    +YC    L+ L K    +   +  I+    + + 
Sbjct: 54  LKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQ 111

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
           A+ + H    ++RD+KPENI+I + G I L DF  +  L+ 
Sbjct: 112 AVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG 152

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 61.6 bits (149), Expect = 1e-10
 Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 67/236 (28%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ---MFSDDTIRF 132
           E  +L+N++H  +  L  ++ T++ +    +Y     L S  KQ  +    + S   ++ 
Sbjct: 53  EVSLLKNLKHANIVTLHDIIHTERCLTLVFEY-----LDSDLKQYLDNCGNLMSMHNVKI 107

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           +  +L+  L Y H   I++RDLKP+N++I E G + L DF L+   S  T   S + V  
Sbjct: 108 FMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV-- 165

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                                           +   PP           +  +G+ EY  
Sbjct: 166 -------------------------------TLWYRPP-----------DVLLGSTEYST 183

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           P           +D W +G +L+EM  G   F GS+ KE  + I      L+G PT
Sbjct: 184 P-----------IDMWGVGCILYEMATGRPMFPGSTVKEELHLIF----RLLGTPT 224

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 243 SFVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP 301
           SF G+  ++APE+I  +G +  A D WSLG  + EM  G  P+         ++I  R  
Sbjct: 160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKI-GRSK 218

Query: 302 DLVGEPTPL----RNLIRRLLEKDPTKRIGVEEIKGHEF 336
           +L   P  L    ++ I + L++DP+ R    E+  H F
Sbjct: 219 ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 61.2 bits (148), Expect = 2e-10
 Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
            R    LG+G  G V   +   + + +A K + +  I+K+  E    +          E+
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALN----------EK 51

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           ++L  V    +  L     T   +   +    G DL        E  F +    FYAAE+
Sbjct: 52  QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEI 111

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              LE LH   IVYRDLKPENI++ ++GHI + D  L+
Sbjct: 112 CCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 61.6 bits (150), Expect = 2e-10
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 16/152 (10%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA GVV    D  S +  A+K I            T        +R   E ++LR+ 
Sbjct: 13  IGSGAYGVVCSAIDTRSGKKVAIKKI-----PHAFDVPTLA------KRTLRELKILRHF 61

Query: 84  EHPLLPRLRGVLSTDKFVG---YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           +H  +  +R +L          Y +      DLH +    S+Q  +++ IR++  +L+  
Sbjct: 62  KHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHI--IHSDQPLTEEHIRYFLYQLLRG 119

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
           L+Y+H+  +++RDLKP N+++ E+  + + DF
Sbjct: 120 LKYIHSANVIHRDLKPSNLLVNEDCELRIGDF 151

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 61.0 bits (149), Expect = 2e-10
 Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 26/164 (15%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS----KELTNNDNGDKYRRISFEQRV 79
           LG GA G V+             K   +    K +    K L  + + ++ +    E RV
Sbjct: 3   LGEGAFGEVY-------------KGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARV 49

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSD-DTIRF---- 132
           ++ + HP + RL GV  T++   Y + +Y  G DL   LRK +      +  T+      
Sbjct: 50  MKKLGHPNVVRLLGV-CTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLL 108

Query: 133 -YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +A ++   +EYL +   V+RDL   N ++ E+  + + DF LS
Sbjct: 109 SFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLS 152

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 60.8 bits (147), Expect = 2e-10
 Identities = 68/331 (20%), Positives = 128/331 (38%), Gaps = 90/331 (27%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           ++  +G G  G V+  +++ + E  A+K+I               + GD +  I  E  +
Sbjct: 13  LIQRVGSGTYGDVYKARNLHTGELAAVKII-------------KLEPGDDFSLIQQEIFM 59

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           ++  +H  +    G   + + +   ++YC G  L  +         S+  I +   E + 
Sbjct: 60  VKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGP--LSELQIAYVCRETLQ 117

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            L YLH+ G ++RD+K  NI++ +NG + L DF ++ K++                 + I
Sbjct: 118 GLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT-----------------ATI 160

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII--- 256
            KR+                                       SF+GT  ++APE+    
Sbjct: 161 AKRK---------------------------------------SFIGTPYWMAPEVAAVE 181

Query: 257 EGKGHDFAVDWWSLGVVLHEM------LYGATPFRG--SSRKETFYRILCRPPDLVGE-- 306
           +  G++   D W++G+   E+      ++   P R      K  F     +PP L  +  
Sbjct: 182 KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNF-----QPPKLKDKTK 236

Query: 307 -PTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
             +   N ++  L K+P KR   E +  H F
Sbjct: 237 WSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 25/174 (14%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G  G+V+  +D  S E  ALK +  D  E+    +++       R I     +L N+
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALKKVRMDN-ERDGIPISS------LREI----TLLLNL 63

Query: 84  EHPLLPRLRGVLSTDKFVGYAID-------YCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
            HP +  L+ V+     VG  +D       YC  +DL SL        FS+  ++    +
Sbjct: 64  RHPNIVELKEVV-----VGKHLDSIFLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQ 116

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           L+  L+YLH   I++RDLK  N+++ + G + + DF L+          +PK V
Sbjct: 117 LLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVV 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 60.4 bits (146), Expect = 4e-10
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 10/155 (6%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V   +   + + +A K + +  I+K+  E    +          E+R+L  V
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN----------EKRILEKV 57

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
               +  L     T   +   +    G DL           F +    FYAAEL   LE 
Sbjct: 58  NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLED 117

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
           L    IVYRDLKPENI++ + GHI + D  L+ ++
Sbjct: 118 LQRERIVYRDLKPENILLDDRGHIRISDLGLAVQI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 60.1 bits (145), Expect = 5e-10
 Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 22/179 (12%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G V+  +DV +SE  A+K +            +   + +K++ I  E R L+ +
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKM----------SYSGKQSNEKWQDIIKEVRFLQKL 72

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            HP   + RG    +      ++YC G   DL  + K+  +++     I       +  L
Sbjct: 73  RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAAVTHGALQGL 128

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK-----TPQ-ASPKTVLAAN 194
            YLH+  +++RD+K  NI++ E G + L DF  ++ ++P      TP   +P+ +LA +
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMD 187

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 60.0 bits (146), Expect = 5e-10
 Identities = 84/377 (22%), Positives = 129/377 (34%), Gaps = 123/377 (32%)

Query: 20  IVSALGRGAKGVVFLVKDVESSES--FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           I   +GRG  G V+  K     +   +A+K        K  KE     +    R I+   
Sbjct: 4   IEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKF------KGDKEQYTGISQSACREIA--- 54

Query: 78  RVLRNVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSLRKQQSE---QMFSDDTIRF 132
            +LR ++H  +  L  V     DK V    DY    DL  + K   +          ++ 
Sbjct: 55  -LLRELKHENVVSLVEVFLEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKS 112

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMI----QENGHIMLVDFDLSTKLSPKTPQASPK 188
              +++  + YLH+  +++RDLKP NI++     E G + + D  L+         A  K
Sbjct: 113 LLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLF-----NAPLK 167

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
            +                           DPV                        V T 
Sbjct: 168 PLAD------------------------LDPV------------------------VVTI 179

Query: 249 EYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRK------------ETFYR 295
            Y APE++ G  H   A+D W++G +  E+L     F+G   K            E  + 
Sbjct: 180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239

Query: 296 ILCRP-----PDLVGEP------------------------------TPLRNLIRRLLEK 320
           +L  P     PD+   P                              +   +L+R+LLE 
Sbjct: 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEY 299

Query: 321 DPTKRIGVEEIKGHEFF 337
           DPTKRI  EE   H +F
Sbjct: 300 DPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 60.0 bits (145), Expect = 6e-10
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 27/166 (16%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWR----DLIEKKSKELTNNDNGDKYRRIS 74
           R +  +G GA G V    D  +    A+K ++R    +L  K++           YR   
Sbjct: 18  RDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRA-----------YR--- 63

Query: 75  FEQRVLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDT 129
            E R+L++++H     LL      LS D+F   Y +    G DL  L K +     S+D 
Sbjct: 64  -ELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEK---LSEDR 119

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           I+F   +++  L+Y+H  GI++RDLKP N+ + E+  + ++DF L+
Sbjct: 120 IQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 165

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 59.6 bits (145), Expect = 6e-10
 Identities = 53/244 (21%), Positives = 84/244 (34%), Gaps = 85/244 (34%)

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           I+ Y  +L+  + YLH   I++RD+K  NI+I   G + + DF L+              
Sbjct: 117 IKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLA-------------- 162

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                        R +           + P  +P+ G           + K  + V T  
Sbjct: 163 -------------RPY-----------DGPPPNPKGGGGG-------GTRKYTNLVVTRW 191

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y  PE++ G + +  AVD W +G V  EM       +G S  +  + I      L G PT
Sbjct: 192 YRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF----KLCGTPT 247

Query: 309 P------------------------LR-----------NLIRRLLEKDPTKRIGVEEIKG 333
                                    L            +L+ +LL  DP KR+   +   
Sbjct: 248 EETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307

Query: 334 HEFF 337
           H +F
Sbjct: 308 HPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 59.4 bits (144), Expect = 8e-10
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 17/171 (9%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +I   +G+G+ GVV    D  + E  A+K I  D+ E  S             RI  E +
Sbjct: 3   KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-NDVFEHVSDAT----------RILREIK 51

Query: 79  VLRNVEHPLLPRLRGVL---STDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           +LR + HP +  ++ ++   S  +F   Y +      DLH + K   +   + +  +F+ 
Sbjct: 52  LLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDD--LTPEHHQFFL 109

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
            +L+ AL+Y+H   + +RDLKP+NI+   +  + + DF L+      TP A
Sbjct: 110 YQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 160

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 58.8 bits (142), Expect = 9e-10
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 13/172 (7%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V  V+   + + +A K + +  ++KKS E          +    E+ +L  V
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGE----------KMALLEKEILEKV 50

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
             P +  L     +   +   +    G DL        E+    + +  Y+A++   + +
Sbjct: 51  NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILH 110

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL---SPKTPQASPKTVLA 192
           LH+M IVYRD+KPEN+++ + G+  L D  L+ +L      T +A     +A
Sbjct: 111 LHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMA 162

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 59.3 bits (143), Expect = 1e-09
 Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 19/160 (11%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           ++ +G GA G V    D    +  A+K + R       + L +       RR   E R+L
Sbjct: 20  LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-----QSLIHA------RRTYRELRLL 68

Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           ++++H     LL       S + F   Y +    G DL+++ K Q     SD+ ++F   
Sbjct: 69  KHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQK---LSDEHVQFLIY 125

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +L+  L+Y+H+ GI++RDLKP N+ + E+  + ++DF L+
Sbjct: 126 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 165

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 25/188 (13%)

Query: 15  FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS 74
           F+ LR    +G G+ G V+  +DV ++E  A+K +            +   + +K++ I 
Sbjct: 27  FTDLR---EIGHGSFGAVYFARDVRTNEVVAIKKM----------SYSGKQSNEKWQDII 73

Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRF 132
            E + L+ ++HP     +G    +      ++YC G   DL  + K+  +++     I  
Sbjct: 74  KEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAA 129

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK-----TPQ-AS 186
                +  L YLH+  +++RD+K  NI++ E G + L DF  ++  SP      TP   +
Sbjct: 130 ITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMA 189

Query: 187 PKTVLAAN 194
           P+ +LA +
Sbjct: 190 PEVILAMD 197

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 34/165 (20%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +I+  +G G    V   +  ++ + +A+K + +     KS E  NN      R I    +
Sbjct: 2   KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHF---KSLEQVNN-----LREI----Q 49

Query: 79  VLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGR----------DLHSLRKQQSEQMFSD 127
            LR +  HP + RL  VL          D   GR          +L+ L K + ++   +
Sbjct: 50  ALRRLSPHPNILRLIEVL---------FDRKTGRLALVFELMDMNLYELIKGR-KRPLPE 99

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
             ++ Y  +L+ +L+++H  GI +RD+KPENI+I+++  + L DF
Sbjct: 100 KRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDD-ILKLADF 143

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 71/328 (21%), Positives = 119/328 (36%), Gaps = 86/328 (26%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V+    + +    A+KVI  D+    + EL         ++I  E  +L   
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIPLDI----TVELQ--------KQIMSELEILYKC 56

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           + P +    G    +  +    ++  G  L   RK        +  +   A  +V  L Y
Sbjct: 57  DSPYIIGFYGAFFVENRISICTEFMDGGSLDVYRK------IPEHVLGRIAVAVVKGLTY 110

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           L ++ I++RD+KP N+++   G +                                    
Sbjct: 111 LWSLKILHRDVKPSNMLVNTRGQV------------------------------------ 134

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
               K C  G+S +  V+S                  + ++VGT  Y+APE I G+ +  
Sbjct: 135 ----KLCDFGVSTQ-LVNS-----------------IAKTYVGTNAYMAPERISGEQYGI 172

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----C----RPPDL-VGEPTP-LRNL 313
             D WSLG+   E+  G  P+    + +     L    C     PP L VG+ +    + 
Sbjct: 173 HSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHF 232

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           I + + K P +R   E +  H F    N
Sbjct: 233 ITQCMRKQPKERPAPENLMDHPFIVQYN 260

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 57.9 bits (141), Expect = 2e-09
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF------YRILCR 299
           GT +Y +PE I+G  +D + DWW++GV+ +E+L G  PF+     E         R   +
Sbjct: 168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK-EDEDEELDLESLLKRQQKK 226

Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKR-IGVEEIKGHEFFK 338
            P +        + ++ +L+ +   R     EI  H F K
Sbjct: 227 LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266

Length = 267

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 57.8 bits (139), Expect = 3e-09
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 2/104 (1%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
           +D+  K N+FVGT  ++APE+I+   +D   D WSLG+   E+  G  P          +
Sbjct: 152 TDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF 211

Query: 295 RI-LCRPPDLVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
            I    PP L GE + P +  I   L KDP+ R   +E+  H+F
Sbjct: 212 LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 57.0 bits (137), Expect = 4e-09
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
           +D+  K N+FVGT  ++APE+I+   +D   D WSLG+   E+  G  P       +  +
Sbjct: 152 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLF 211

Query: 295 RI-LCRPPDLVGE-PTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
            I    PP L G    PL+  +   L K+P+ R   +E+  H+F
Sbjct: 212 LIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 255

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 57.4 bits (138), Expect = 5e-09
 Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 19/160 (11%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V          +F  K   R  ++K S+   +  +  +  R   E R+L
Sbjct: 22  LSPVGSGAYGSV--------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLL 70

Query: 81  RNVEHPLLPRLRGVLSTDKFVG-----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           ++++H  +  L  V +  + +      Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 71  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 127

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +++  L+Y+H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 128 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 167

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 57.0 bits (137), Expect = 5e-09
 Identities = 69/318 (21%), Positives = 128/318 (40%), Gaps = 76/318 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +     S +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 74

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +H  +  +         +   +++  G  L  +    +    +++ I      ++ AL  
Sbjct: 75  QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLKALSV 131

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH  G+++RD+K ++I++  +G + L DF                               
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 161

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                FC+  +S E P                    +  S VGT  ++APE+I    +  
Sbjct: 162 -----FCAQ-VSKEVP--------------------RRKSLVGTPYWMAPELISRLPYGP 195

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +    I    PP L  + + +P L+  + RLL 
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLV 255

Query: 320 KDPTKRIGVEEIKGHEFF 337
           +DP +R    E+  H F 
Sbjct: 256 RDPAQRATAAELLKHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 56.2 bits (135), Expect = 9e-09
 Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 21/164 (12%)

Query: 21  VSALGRGAKGVVFLVKDVESSESF-ALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           V+ +G GA G VF  +D+++   F ALK + R    ++   L+        R ++   R 
Sbjct: 6   VAEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLST------IREVAV-LRH 57

Query: 80  LRNVEHPLLPRLRGVLS---TDK-----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           L   EHP + RL  V +   TD+      V   +D    +DL +   +  E     +TI+
Sbjct: 58  LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETIK 113

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
               +L+  L++LH+  +V+RDLKP+NI++  +G I L DF L+
Sbjct: 114 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 62/279 (22%), Positives = 106/279 (37%), Gaps = 68/279 (24%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
             ++  +G GA GVV   +  E+ E  A+K        ++ KE T             E 
Sbjct: 3   FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLR-----------EL 51

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           ++LR ++   +  L+        +    +Y     L  L +  +      + +R Y  +L
Sbjct: 52  KMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVP--PEKVRSYIYQL 109

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
           + A+ + H   IV+RD+KPEN++I  N  + L DF  +  L                   
Sbjct: 110 IKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNL------------------- 150

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
                        S G                   S+++ +E    +V T  Y +PE++ 
Sbjct: 151 -------------SEG-------------------SNANYTE----YVATRWYRSPELLL 174

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI 296
           G  +  AVD WS+G +L E+  G   F G S  +  + I
Sbjct: 175 GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI 213

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 40/132 (30%), Positives = 52/132 (39%), Gaps = 41/132 (31%)

Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V T  Y APEI+    H +  VD WS+G ++ E+L G T F GS   +   RI+    +
Sbjct: 175 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIM----N 230

Query: 303 LVGEPTP----------LRNLIRR----------------------LLEK----DPTKRI 326
           LVG P             RN I+                       LLEK    DP KRI
Sbjct: 231 LVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI 290

Query: 327 GVEEIKGHEFFK 338
              E   H +  
Sbjct: 291 TAAEALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 22/179 (12%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G V+   +  ++E  A+K +        S + TN    +K++ I  E + L+ +
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKM------SYSGKQTN----EKWQDIIKEVKFLQQL 78

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
           +HP     +G    +      ++YC G   DL  + K+  +++     I       +  L
Sbjct: 79  KHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAAITHGALQGL 134

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK-----TPQ-ASPKTVLAAN 194
            YLH+  +++RD+K  NI++ E G + L DF  ++K SP      TP   +P+ +LA +
Sbjct: 135 AYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMD 193

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 54.5 bits (132), Expect = 3e-08
 Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 33/121 (27%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPD---- 302
           Y  PE++ G   +   VD WS+G +L E+  G   F+GS+  E   +I  LC  P     
Sbjct: 167 YRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENW 226

Query: 303 -------LVGEPTPLRN-------------------LIRRLLEKDPTKRIGVEEIKGHEF 336
                        P +                    L+ +LL  DP KRI  ++   HE+
Sbjct: 227 PGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286

Query: 337 F 337
           F
Sbjct: 287 F 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 54.6 bits (131), Expect = 3e-08
 Identities = 63/296 (21%), Positives = 110/296 (37%), Gaps = 88/296 (29%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           E  +L++++H  +  L  ++ TDK +    +Y   +DL          M S   ++ +  
Sbjct: 54  EVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYL-DKDLKQYMDDCGNIM-SMHNVKIFLY 111

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           +++  L Y H   +++RDLKP+N++I E G + L DF L+   S  T   S + V     
Sbjct: 112 QILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV----- 166

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                                        +   PP           +  +G+ EY     
Sbjct: 167 ----------------------------TLWYRPP-----------DVLLGSSEYST--- 184

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRP-----PDLVG-- 305
                    +D W +G +  EM  G   F GS+ ++     +R+L  P     P +    
Sbjct: 185 --------QIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236

Query: 306 ----------EPTPLRN-----------LIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
                     +P PL N           L+ + L+ +  KRI  EE   H +F+ +
Sbjct: 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 79/354 (22%), Positives = 134/354 (37%), Gaps = 110/354 (31%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
           +  +G G  GVV+  ++ ++ +  A+K I           L + + G      R IS   
Sbjct: 5   IEKIGEGTYGVVYKGRNKKTGQIVAMKKI----------RLESEEEGVPSTAIREIS--- 51

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCP---GRDLHSLRKQQSEQMFSDDTIRFYA 134
            +L+ ++HP +  L+ VL  +  +    ++      + L SL K    Q    + ++ Y 
Sbjct: 52  -LLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPK---GQYMDAELVKSYL 107

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
            +++  + + H+  +++RDLKP+N++I   G I L DF L+                   
Sbjct: 108 YQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLA------------------- 148

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                   R+F       GI +    H                       V T  Y APE
Sbjct: 149 --------RAF-------GIPVRVYTHE----------------------VVTLWYRAPE 171

Query: 255 IIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLV------ 304
           ++ G   +   VD WS+G +  EM      F G S  +  +RI   L  P + V      
Sbjct: 172 VLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTS 231

Query: 305 ----------GEPTPLRNLIRR-------LLEK----DPTKRIGVEEIKGHEFF 337
                      +   LR+ ++        LLEK    DP KRI  ++   H +F
Sbjct: 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 53.6 bits (130), Expect = 4e-08
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 39/123 (31%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI+ G K +  AVD WS+G +  EM+ G   F G S  +  ++I      ++G PT
Sbjct: 164 YRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIF----QILGTPT 219

Query: 309 P----------------------------------LRNLIRRLLEKDPTKRIGVEEIKGH 334
                                                +L+ ++L+ +P KRI  +E   H
Sbjct: 220 EESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279

Query: 335 EFF 337
            +F
Sbjct: 280 PYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 53.9 bits (129), Expect = 4e-08
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
           S  +  ++S VGT  Y++PE I   G++F  D WSLG +L+EM    +PF G   K   Y
Sbjct: 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD--KMNLY 214

Query: 295 RIL-----CRPPDLVGE--PTPLRNLIRRLLEKDPTKR 325
            +      C  P L  +     LR L+   +  DP KR
Sbjct: 215 SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 83/371 (22%), Positives = 126/371 (33%), Gaps = 130/371 (35%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S    A     R LI  + K    N       +I  E +VL
Sbjct: 10  ISELGAGNGGVVFKVSHKPSGLIMA-----RKLIHLEIKPAIRN-------QIIRELQVL 57

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFYAAEL 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I      +
Sbjct: 58  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AV 112

Query: 138 VLALEYL-HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           +  L YL     I++RD+KP NI++   G I                             
Sbjct: 113 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI----------------------------- 143

Query: 197 SGIKKRRSFLSKFCSSGIS--LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                      K C  G+S  L D +                    +NSFVGT  Y++PE
Sbjct: 144 -----------KLCDFGVSGQLIDSM--------------------ANSFVGTRSYMSPE 172

Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPF-----------------------------R 285
            ++G  +    D WS+G+ L EM  G  P                              R
Sbjct: 173 RLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR 232

Query: 286 GSSRKETFYRILCRPPD--------LVGEPTP----------LRNLIRRLLEKDPTKRIG 327
              R  + Y    RPP         +V EP P           ++ + + L K+P +R  
Sbjct: 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERAD 292

Query: 328 VEEIKGHEFFK 338
           ++++  H F K
Sbjct: 293 LKQLMVHAFIK 303

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 54.0 bits (130), Expect = 5e-08
 Identities = 81/366 (22%), Positives = 124/366 (33%), Gaps = 122/366 (33%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
              +  LG G  GVV  V    S    A     R LI  + K    N       +I  E 
Sbjct: 3   FEKLGELGAGNGGVVTKVLHRPSGLIMA-----RKLIHLEIKPAIRN-------QIIREL 50

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFYA 134
           +VL     P +    G   +D  +   +++  G  L  + K+     E +    +I    
Sbjct: 51  KVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISI---- 106

Query: 135 AELVLALEYLH-NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
             ++  L YL     I++RD+KP NI++   G I                          
Sbjct: 107 -AVLRGLTYLREKHKIMHRDVKPSNILVNSRGEI-------------------------- 139

Query: 194 NTRSGIKKRRSFLSKFCSSGIS--LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                         K C  G+S  L D +                    +NSFVGT  Y+
Sbjct: 140 --------------KLCDFGVSGQLIDSM--------------------ANSFVGTRSYM 165

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYG----------------ATPFRGSSRKETFYR 295
           +PE ++G  +    D WSLG+ L EM  G                  P      KE+   
Sbjct: 166 SPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRP 225

Query: 296 ILCRPPD-------------LVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
           +   PPD             +V EP P           ++ + + L+K+P +R  ++E+ 
Sbjct: 226 VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELT 285

Query: 333 GHEFFK 338
            H F K
Sbjct: 286 KHPFIK 291

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 52.9 bits (127), Expect = 8e-08
 Identities = 80/336 (23%), Positives = 120/336 (35%), Gaps = 92/336 (27%)

Query: 13  LDFSCLRIVSALGRGAKGVVFL--VKDVESSESF-ALKVIWRDLIEKKSKELTNNDNGDK 69
           +D SC++I   +G G  G V    +K     E F A+K +     EK+ ++  +      
Sbjct: 1   IDVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLS------ 54

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
                 E  ++   +HP +  L GV++  + V    ++     L S  +Q   Q      
Sbjct: 55  ------EASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQ------ 102

Query: 130 IRFYAAELV-------LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
             F   +LV         ++YL  M  V+RDL   NI++  N    + DF LS  L   T
Sbjct: 103 --FTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160

Query: 183 PQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN 242
                                              DP ++  +G   P R          
Sbjct: 161 ----------------------------------SDPTYTSSLGGKIPIR---------- 176

Query: 243 SFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRK------ETFYR 295
                  + APE I  +    A D WS G+V+ E M YG  P+   S +      E  YR
Sbjct: 177 -------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR 229

Query: 296 ILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
            L  P D    PT L  L+    +KD   R    +I
Sbjct: 230 -LPPPMDC---PTALHQLMLDCWQKDRNARPKFGQI 261

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
           S  +  ++S VGT  Y++PE I   G++F  D WSLG +L+EM    +PF G   K   +
Sbjct: 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD--KMNLF 214

Query: 295 RIL-----CRPPDLVGE--PTPLRNLIRRLLEKDPTKR 325
            +      C  P L  E     LR L+   +  DP +R
Sbjct: 215 SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 81/329 (24%), Positives = 120/329 (36%), Gaps = 80/329 (24%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +D SC++I   +G G  G V          S  LK+  +  I    K L       + R 
Sbjct: 1   IDASCIKIEKVIGAGEFGEVC---------SGRLKLPGKREIPVAIKTLKAGYTEKQRRD 51

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E  ++   +HP +  L GV++  K V    +Y     L +  ++   Q        F
Sbjct: 52  FLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQ--------F 103

Query: 133 YAAELV-------LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
              +LV         ++YL +MG V+RDL   NI++  N    + DF LS  L    P+A
Sbjct: 104 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE-DDPEA 162

Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV 245
                 A  TR G                         +I    P R             
Sbjct: 163 ------AYTTRGG-------------------------KI----PIR------------- 174

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRIL--CRPPD 302
               + APE I  +    A D WS G+V+ E M YG  P+   S ++    I    R P 
Sbjct: 175 ----WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPA 230

Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
            +  P  L  L+    +KD  +R   E+I
Sbjct: 231 PMDCPAALHQLMLDCWQKDRNERPKFEQI 259

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 51.8 bits (125), Expect = 3e-07
 Identities = 33/142 (23%), Positives = 51/142 (35%), Gaps = 35/142 (24%)

Query: 234 DSDSSEKSN--SFVGTEEYVAPEII-EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR- 289
           D D  EK     +V T  Y APE++     +  A+D WS+G +  E+L     F G    
Sbjct: 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI 213

Query: 290 --------------KETFYRILC------------RPP----DLVGEPTPL-RNLIRRLL 318
                         +E    I              +P      L    +P   +L+ ++L
Sbjct: 214 DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKML 273

Query: 319 EKDPTKRIGVEEIKGHEFFKGV 340
             DP KRI  +E   H +   +
Sbjct: 274 VFDPKKRITADEALAHPYLAQL 295

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 2/117 (1%)

Query: 59  KELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRK 118
           K   N  +     +   E  ++R  +HP + +L GV+ T+  V   ++  P  +L S  +
Sbjct: 40  KTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVI-TENPVWIVMELAPLGELRSYLQ 98

Query: 119 QQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                +    ++  Y+ +L  AL YL +   V+RD+   N+++     + L DF LS
Sbjct: 99  VNKYSL-DLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLS 154

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 51.4 bits (123), Expect = 4e-07
 Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 28/161 (17%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWR----DLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +G GA G V    D  + E  A+K + R    ++  K++           YR    E  +
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRA-----------YR----ELTL 67

Query: 80  LRNVEHPLLPRLRGVL----STDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           L++++H  +  L  V     S D+F   Y +      DL  +         S+D +++  
Sbjct: 68  LKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHP----LSEDKVQYLV 123

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +++  L+Y+H+ GI++RDLKP N+ + E+  + ++DF L+
Sbjct: 124 YQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLA 164

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 51.5 bits (123), Expect = 4e-07
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 15/103 (14%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFV-----GYAID-YCPGRDLHSLRKQQSEQMFSDDT 129
           E  +LR + HP + +L+G  + +KF       Y  D YC    L + R      + + + 
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYCY---LAAKRNIAICDILAIER 189

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
                  ++ A++YLH   I++RD+K ENI I   G + L DF
Sbjct: 190 ------SVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDF 226

Length = 391

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 50.4 bits (120), Expect = 6e-07
 Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 14/171 (8%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIW-RDLIEKKSKELTNNDNGDKYRRISFE 76
            RI   +GRG    V+    +      ALK +   DL++ K++        D  + I   
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARA-------DCIKEID-- 54

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRK--QQSEQMFSDDTIRFYA 134
             +L+ + HP + +       D  +   ++     DL  + K  ++ +++  + T+  Y 
Sbjct: 55  --LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYF 112

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
            +L  ALE++H+  +++RD+KP N+ I   G + L D  L    S KT  A
Sbjct: 113 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 50.1 bits (120), Expect = 6e-07
 Identities = 51/282 (18%), Positives = 94/282 (33%), Gaps = 66/282 (23%)

Query: 50  WRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCP 109
           W++ +    K L  +D+  K +    E + L+ + H  L  L  V S  + V    +   
Sbjct: 27  WKNRVRVAIKIL-KSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85

Query: 110 GRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML 169
              L +  +    Q+    ++   A ++   + YL     ++RDL   NI++ E+    +
Sbjct: 86  KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKV 145

Query: 170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDP 229
            DF L+                                        +++ V+        
Sbjct: 146 ADFGLAR--------------------------------------LIKEDVYLS------ 161

Query: 230 PSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSS 288
              SD     K         + APE           D WS G++L+EM  YG  P+ G +
Sbjct: 162 ---SDKKIPYK---------WTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN 209

Query: 289 RKETFYRI-----LCRPPDLVGEPTPLRNLIRRLLEKDPTKR 325
             E + +I     +  P      P  +  ++      +P  R
Sbjct: 210 NHEVYDQITAGYRMPCPAKC---PQEIYKIMLECWAAEPEDR 248

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 82/347 (23%), Positives = 121/347 (34%), Gaps = 117/347 (33%)

Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +GRGA G V  +    S    A+K I   + EK+ K L           +  +  V+R+
Sbjct: 11  EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRL----------LMDLDV-VMRS 59

Query: 83  VEHPLLPRLRGVL---------------STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
            + P + +  G L               S DKF  Y   Y   +            +  +
Sbjct: 60  SDCPYIVKFYGALFREGDCWICMELMDISLDKF--YKYVYEVLK-----------SVIPE 106

Query: 128 DTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           + +   A   V AL YL   + I++RD+KP NI++  NG+I                   
Sbjct: 107 EILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNI------------------- 147

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGIS--LEDPVHSPRIGPDPPSRSDSDSSEKSNSF 244
                                K C  GIS  L D +   R           D        
Sbjct: 148 ---------------------KLCDFGISGQLVDSIAKTR-----------D-------- 167

Query: 245 VGTEEYVAPEIIE---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-- 299
            G   Y+APE I+     G+D   D WSLG+ L+E+  G  P+   +   + +  L +  
Sbjct: 168 AGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN---SVFDQLTQVV 224

Query: 300 ---PPDLVGEPT-----PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              PP L             N I   L KD +KR   +E+  H F K
Sbjct: 225 KGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 50.5 bits (120), Expect = 7e-07
 Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 14/152 (9%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V+  K   + +  ALKVI               + G  +  I  E  +L+ +
Sbjct: 13  LGEGSYATVYKGKSKVNGKLVALKVI-----------RLQEEEGTPFTAIR-EASLLKGL 60

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +H  +  L  ++ T + +    +Y    DL     +    +  ++ ++ +  +L+  L Y
Sbjct: 61  KHANIVLLHDIIHTKETLTLVFEYV-HTDLCQYMDKHPGGLHPEN-VKLFLFQLLRGLSY 118

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +H   I++RDLKP+N++I + G + L DF L+
Sbjct: 119 IHQRYILHRDLKPQNLLISDTGELKLADFGLA 150

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 49.7 bits (119), Expect = 9e-07
 Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 14/170 (8%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIW-RDLIEKKSKELTNNDNGDKYRRISFEQ 77
           +I   +G+G   VV+    +      ALK +   ++++ K+++               E 
Sbjct: 5   KIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQ-----------DCLKEI 53

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ--MFSDDTIRFYAA 135
            +L+ ++HP + +       +  +   ++     DL  + K   +Q  +  + TI  Y  
Sbjct: 54  DLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFV 113

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
           +L  ALE++H+  I++RD+KP N+ I   G + L D  L    S KT  A
Sbjct: 114 QLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 62/297 (20%), Positives = 105/297 (35%), Gaps = 93/297 (31%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           E  +L+ ++H  +  L  ++ T + + +  +Y    DL     Q    +   + +R +  
Sbjct: 53  EASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYN-VRLFMF 110

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           +L+  L Y+H   I++RDLKP+N++I   G + L DF L          A  K++     
Sbjct: 111 QLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGL----------ARAKSI----- 155

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                                             PS++ S       S V T  Y  P++
Sbjct: 156 ----------------------------------PSQTYS-------SEVVTLWYRPPDV 174

Query: 256 IEGK-GHDFAVDWWSLGVVLHEMLYGATPFRG-SSRKETFYRI----------------- 296
           + G   +  A+D W  G +  EML G   F G S   E   +I                 
Sbjct: 175 LLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234

Query: 297 ----------LCRPPDL------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
                      C+P  L      +  P    +L  ++L   P  RI  ++   H +F
Sbjct: 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 21/183 (11%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           + S    ++ +G+G  G VF  +  ++ +  ALK +     EK+   +T        R I
Sbjct: 10  EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKV-LMENEKEGFPIT------ALREI 62

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVG-------YAI-DYCPGRDLHSLRKQQSEQMF 125
               ++L+ ++H  +  L  +  T            Y + ++C   DL  L   ++ + F
Sbjct: 63  ----KILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVK-F 116

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
           +   I+     L+  L Y+H   I++RD+K  NI+I ++G + L DF L+   S      
Sbjct: 117 TLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK 176

Query: 186 SPK 188
             +
Sbjct: 177 PNR 179

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 21/165 (12%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  +G G  G V+  +D ++ E  ALK +           L N   G     I  E ++
Sbjct: 11  IIGQIGEGTYGQVYKARDKDTGELVALKKV----------RLDNEKEGFPITAIR-EIKI 59

Query: 80  LRNVEHPLLPRLRGVLS---------TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           LR + H  +  L+ +++          DK   Y +      DL  L +      FS+D I
Sbjct: 60  LRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVH-FSEDHI 118

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           + +  +L+  L Y H    ++RD+K  NI++   G I L DF L+
Sbjct: 119 KSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLA 163

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 29/173 (16%)

Query: 18  LRIVSALGRGAKGVVF--LVKDVESSESF---ALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           + ++  LG+G+ G+V+  L K V   E     A+K              T N+N     R
Sbjct: 8   ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIK--------------TVNENASMRER 53

Query: 73  ISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSD-- 127
           I F  E  V++      + RL GV+ST +     ++     DL S LR ++ E   +   
Sbjct: 54  IEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGL 113

Query: 128 ---DTIRFY--AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                 +F   AAE+   + YL     V+RDL   N M+ E+  + + DF ++
Sbjct: 114 GPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMT 166

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 27/106 (25%), Positives = 57/106 (53%), Gaps = 3/106 (2%)

Query: 72  RISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           +I F  E R+L+  +HP + +L GV +  + +   ++  PG D  S  +++ +++ +   
Sbjct: 36  KIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQL 95

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           ++F A +    + YL +   ++RDL   N ++ EN  + + DF +S
Sbjct: 96  VKF-ALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMS 140

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 69/300 (23%), Positives = 111/300 (37%), Gaps = 99/300 (33%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ---MFSDDTIRF 132
           E  +L++++H  +  L  ++ T K +    +Y    DL    KQ  +      S   +R 
Sbjct: 53  EASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDL----KQYMDDCGGGLSMHNVRL 107

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           +  +L+  L Y H   +++RDLKP+N++I E G + L DF L          A  K+V  
Sbjct: 108 FLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGL----------ARAKSV-- 155

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                                                PS++ S+        V T  Y  
Sbjct: 156 -------------------------------------PSKTYSNE-------VVTLWYRP 171

Query: 253 PEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE----TFYRILCRP------- 300
           P+++ G   +  ++D W +G + +EM  G   F GS+  E      +R+L  P       
Sbjct: 172 PDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPG 231

Query: 301 ----PDLVGE------PTPLRNLIRRL-------------LEKDPTKRIGVEEIKGHEFF 337
               P+          P PL N   RL             L+ +P KRI   E   H +F
Sbjct: 232 VSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 47.4 bits (113), Expect = 5e-06
 Identities = 32/171 (18%), Positives = 70/171 (40%), Gaps = 21/171 (12%)

Query: 18  LRIVSALGRGAKGVVFLVK----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           L+ +  LG G  G V L +       + E  A+K +     E+   +             
Sbjct: 6   LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFER---------- 55

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDL-HSLRKQQSEQMFSDDTI 130
             E  +LR ++H  + + +GV          +  +Y P   L   L++ + +   +   +
Sbjct: 56  --EIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQI--NLKRL 111

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK 181
             +++++   ++YL +   ++RDL   NI+++    + + DF L+  L   
Sbjct: 112 LLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 47.3 bits (112), Expect = 6e-06
 Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE---QMFSDDTIRF 132
           E  +L++++H  +  L  ++ T+K +    +Y   +DL    KQ  +      +   ++ 
Sbjct: 54  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDL----KQYLDDCGNSINMHNVKL 108

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           +  +L+  L Y H   +++RDLKP+N++I E G + L DF L+   S  T   S + V
Sbjct: 109 FLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV 166

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 47.0 bits (111), Expect = 8e-06
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 17/157 (10%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G+ G V+   D  + E  A+K+I  DL E +          D+   I  E  VL   
Sbjct: 12  IGKGSFGEVYKGIDNRTKEVVAIKII--DLEEAE----------DEIEDIQQEITVLSQC 59

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPG-RDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           + P + R  G       +   ++Y  G   L  L+    E+ +    +R    E++  L+
Sbjct: 60  DSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR----EILKGLD 115

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
           YLH+   ++RD+K  N+++ E G + L DF ++ +L+
Sbjct: 116 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 47.1 bits (112), Expect = 9e-06
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 32/172 (18%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS-KELTNNDNGDKYRRISFEQRVLRN 82
           LG G+ G+VF   D +  +  A+K I   L + +S K                E +++R 
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIV--LTDPQSVKHALR------------EIKIIRR 58

Query: 83  VEHPLLPRLRGVLS-------------TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           ++H  + ++  VL              T+    Y +      DL ++ +Q      S++ 
Sbjct: 59  LDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGP---LSEEH 115

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
            R +  +L+  L+Y+H+  +++RDLKP N+ I  E+  + + DF L+  + P
Sbjct: 116 ARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDP 167

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 47.1 bits (112), Expect = 9e-06
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL--SPKTPQ 184
           L+ AL YLH  GI++RD+K ENI + E  + +L DF  + KL   P TPQ
Sbjct: 194 LLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243

Length = 392

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 15/156 (9%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G+ G VF   D  + +  A+K+I  DL E +          D+   I  E  VL   
Sbjct: 12  IGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAE----------DEIEDIQQEITVLSQC 59

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           + P + +  G    D  +   ++Y  G     L +        +  I     E++  L+Y
Sbjct: 60  DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDY 116

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
           LH+   ++RD+K  N+++ E+G + L DF ++ +L+
Sbjct: 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 46.6 bits (110), Expect = 1e-05
 Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 2/112 (1%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRK--QQSEQMFSDDTIRFY 133
           E  +L+ + HP + +       D  +   ++     DL  + K  ++ +++  + T+  Y
Sbjct: 52  EIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKY 111

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
             +L  A+E++H+  +++RD+KP N+ I   G + L D  L    S KT  A
Sbjct: 112 FVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 47.0 bits (111), Expect = 1e-05
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 73

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFYAAELVLALE 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +   +++  ++
Sbjct: 74  NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 133

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +LH+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 74/261 (28%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           E ++++ + H  L +L  V S ++ +    +Y   G  L  L+  + +++     +   A
Sbjct: 51  EAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDM-A 109

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
           A++   + YL +   ++RDL   NI++ EN    + DF L+  +                
Sbjct: 110 AQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLI---------------- 153

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                                 ED  ++ R G   P +                 + APE
Sbjct: 154 ----------------------EDDEYTAREGAKFPIK-----------------WTAPE 174

Query: 255 -IIEGKGHDFAV--DWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPPDLV 304
               G+   F +  D WS G++L E++ YG  P+ G + +E        YR + RPP   
Sbjct: 175 AANYGR---FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR-MPRPP--- 227

Query: 305 GEPTPLRNLIRRLLEKDPTKR 325
             P  L +L+ +  +KDP +R
Sbjct: 228 NCPEELYDLMLQCWDKDPEER 248

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILC--RPPDLVGEPT 308
           APE ++        D WS GV+L E+   GATP+ G S +E    +    R P     P 
Sbjct: 175 APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD 234

Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            L  L+    + DP  R    E+   E  +
Sbjct: 235 ELYELMLSCWQLDPEDRPTFSEL--VERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 56/171 (32%)

Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +I+    + 
Sbjct: 177 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKII----EQ 232

Query: 304 VGEPTP------------------------------------------------LRNLIR 315
           +G P+                                                  R+L+ 
Sbjct: 233 LGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLS 292

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
           ++L  DP KRI V++   H +     W    ++  PP  PA ++H  +E +
Sbjct: 293 KMLVIDPEKRISVDDALQHPYIN--VWYDPSEVEAPP--PAPYDHSIDERE 339

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 45.5 bits (108), Expect = 3e-05
 Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 31/179 (17%)

Query: 16  SCLRIVSALGRGA-----KGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           S +R +  LG GA     KG +    +  S+ S A+K +         KE        ++
Sbjct: 5   SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTL---------KENAEPKVQQEF 55

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-----EQMF 125
           R+   E  ++ +++HP +  L GV + ++      +Y    DLH    + S         
Sbjct: 56  RQ---EAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAES 112

Query: 126 SDDTIR---------FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            D+T++           A ++   +EYL +   V+RDL   N ++ E   + + DF LS
Sbjct: 113 GDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLS 171

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 76  EQRVLRNVEHPLLPRLRGV-LSTDKFVGYA-----IDYCPGRDLHSL----RKQQSEQMF 125
           E   ++  +HP + RL GV L T +  GY      + +    DLHS     R     Q  
Sbjct: 50  EAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYL 109

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
               +  +  ++   +EYL +   ++RDL   N M+ EN ++ + DF LS K+
Sbjct: 110 PTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKI 162

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 32  IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFYAAELVLALE 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +   +++  ++
Sbjct: 81  NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +LH+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 78/283 (27%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVV  V+   S       ++ R LI  + K    N       +I  E +VL
Sbjct: 10  ISELGAGNGGVVTKVQHKPSG-----LIMARKLIHLEIKPAIRN-------QIIRELQVL 57

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
                P +    G   +D  +   +++  G  L  + K+   +   ++ +   +  ++  
Sbjct: 58  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRG 115

Query: 141 LEYL-HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           L YL     I++RD+KP NI++                                N+R  I
Sbjct: 116 LAYLREKHQIMHRDVKPSNILV--------------------------------NSRGEI 143

Query: 200 KKRRSFLSKFCSSGIS--LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
           K         C  G+S  L D +                    +NSFVGT  Y++PE ++
Sbjct: 144 K--------LCDFGVSGQLIDSM--------------------ANSFVGTRSYMSPERLQ 175

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP 300
           G  +    D WS+G+ L E+  G  P      KE    I  RP
Sbjct: 176 GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE-LEAIFGRP 217

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 44.3 bits (104), Expect = 5e-05
 Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G+ G VF   D  + +  A+K+I  DL E +          D+   I  E  VL   
Sbjct: 12  IGKGSFGEVFKGIDNRTQQVVAIKII--DLEEAE----------DEIEDIQQEITVLSQC 59

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           + P + +  G       +   ++Y  G     L +      F +  I     E++  L+Y
Sbjct: 60  DSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDY 116

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
           LH+   ++RD+K  N+++ E G + L DF ++ +L+
Sbjct: 117 LHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 12/156 (7%)

Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +L
Sbjct: 26  LKPIGSGAQGIVCAAFDTVLGINVAVK--------KLSRPFQNQTHAKRAYR---ELVLL 74

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFYAAELVL 139
           + V H  +  L  V +  K +    D     +L      Q   M  D + + +   +++ 
Sbjct: 75  KCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC 134

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +++LH+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 135 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 44.6 bits (105), Expect = 5e-05
 Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 22/175 (12%)

Query: 10  IRSLDFSCLRIVSALGRGAKGVVF---LVKDVESSE-SFALKVIWRDLIEKKSKELTNND 65
           +R L  + L+ V  LG GA G V+    + D E+ +   A+KV+  +   K +KE+ +  
Sbjct: 1   MRILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD-- 58

Query: 66  NGDKYRRISFEQRVLRNVEHPLLPRLRGV--LSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
                     E  V+  V  P + RL G+   ST + V   + Y  G  L  +R+ + ++
Sbjct: 59  ----------EAYVMAGVGSPYVCRLLGICLTSTVQLVTQLMPY--GCLLDYVRENK-DR 105

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
           + S D +  +  ++   + YL  + +V+RDL   N++++   H+ + DF L+  L
Sbjct: 106 IGSQDLLN-WCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 44.3 bits (104), Expect = 6e-05
 Identities = 55/265 (20%), Positives = 96/265 (36%), Gaps = 67/265 (25%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           E +V++ + H  L +L  V+S +  +    +Y     L    K +  +      +   AA
Sbjct: 51  EAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 109

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           ++   + Y+  M  V+RDL+  NI++ EN    + DF L+                    
Sbjct: 110 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR------------------- 150

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                               +ED  ++ R G   P +                 + APE 
Sbjct: 151 -------------------LIEDNEYTARQGAKFPIK-----------------WTAPEA 174

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETF------YRILCRPPDLVGEPT 308
                     D WS G++L E+   G  P+ G   +E        YR+ C PP+    P 
Sbjct: 175 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPEC---PE 230

Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKG 333
            L +L+ +   K+P +R   E ++ 
Sbjct: 231 SLHDLMCQCWRKEPEERPTFEYLQA 255

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 44.2 bits (104), Expect = 6e-05
 Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 32/199 (16%)

Query: 13  LDFSCLRIVSALGRGAKGVVF----LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
           L  S +R +  LG  A G ++     +  ++ ++  A+K +         K++ N     
Sbjct: 2   LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTL---------KDINNPQQWG 52

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS---LRKQQSEQMF 125
           ++++   E  ++  + HP +  L GV++ ++ V    +Y    DLH    +R   S+   
Sbjct: 53  EFQQ---EASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGC 109

Query: 126 SDD---TIR---------FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD 173
           S D   T++           A ++   +EYL +   V++DL   NI+I E  H+ + D  
Sbjct: 110 SSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLG 169

Query: 174 LSTKL-SPKTPQASPKTVL 191
           LS ++ S    +  PK++L
Sbjct: 170 LSREIYSADYYRVQPKSLL 188

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 10/113 (8%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVG------YAIDYCPGRDLHSL----RKQQSEQMF 125
           E   +++ +HP + +L GV      +         + +    DLHS     R     +  
Sbjct: 51  EAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKL 110

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
              T+  +  ++ L +EYL N   ++RDL   N M++E+  + + DF LS K+
Sbjct: 111 PLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKI 163

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 22/161 (13%)

Query: 24  LGRGAKGVVFLVKDVESSES------FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           LG G+ GVV   +  E S S       A+K +       KS +L+  D  D + +   E 
Sbjct: 3   LGDGSFGVV---RRGEWSTSGGKVIPVAVKCL-------KSDKLS--DIMDDFLK---EA 47

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
            ++ +++H  L RL GV+ T   +    +  P   L    ++ +   F   T+  YA ++
Sbjct: 48  AIMHSLDHENLIRLYGVVLTHPLM-MVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQI 106

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
              + YL +   ++RDL   NI++  +  + + DF L   L
Sbjct: 107 ANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRAL 147

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 44.7 bits (105), Expect = 7e-05
 Identities = 16/45 (35%), Positives = 31/45 (68%)

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
           + I+    +++  L  LH +GIV+RD+KPEN+++  +G + ++DF
Sbjct: 309 NVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDF 353

Length = 507

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 43.9 bits (104), Expect = 8e-05
 Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 23/159 (14%)

Query: 21  VSALGRGAKG--VVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++ +G+  +   +V L K   ++   A+K I    ++  SKE          + +  E  
Sbjct: 3   LTLIGKCFEDLMIVHLAKHKPTNTLVAVKKI---NLDSCSKE--------DLKLLQQEII 51

Query: 79  VLRNVEHP-LLPRLRGVLSTDKFVGYAI----DYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
             R ++HP +LP +   +   +   Y +     Y    DL  L+    E    +  I F 
Sbjct: 52  TSRQLQHPNILPYVTSFIVDSEL--YVVSPLMAYGSCEDL--LKTHFPEG-LPELAIAFI 106

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
             +++ AL+Y+H+ G ++R +K  +I++  +G ++L   
Sbjct: 107 LKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGL 145

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 43.9 bits (103), Expect = 9e-05
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 29/151 (19%)

Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240

Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPCP--EFMKKL---QPTVRTYVEN---RPKYAGYSFEKLF-----PDVLFPADSEH- 286

Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 37/153 (24%)

Query: 224 RIGPDPPSRSDSDSSEKSNSF----VGTEEYVAPEII-EGKGHDFAVDWWSLGVVLHEML 278
           RIG    +R  S S  +   F    V T  Y APE++     +  A+D WS+G +  EML
Sbjct: 147 RIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML 206

Query: 279 YGATPFRGSSRKETFYRI---LCRPP---------DLV---------GEPTPL------- 310
                F G +       I   L  P          D V          +P P        
Sbjct: 207 GRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKA 266

Query: 311 ----RNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
                +L+ ++L+ DP +RI VE+   H F   
Sbjct: 267 SPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 9/84 (10%)

Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ E++ G+  F+G+   + + +++    + 
Sbjct: 182 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVI----EQ 237

Query: 304 VGEPT-----PLRNLIRRLLEKDP 322
           +G P+      L+  +R  +E  P
Sbjct: 238 LGTPSAEFMNRLQPTVRNYVENRP 261

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 42/126 (33%)

Query: 250 YVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APE++ G      A+D WS+G +  E+L     F G S  +   +I      L+G PT
Sbjct: 172 YRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFK----LLGTPT 227

Query: 309 ------------------------PLRN-------------LIRRLLEKDPTKRIGVEEI 331
                                    LR              L+ RLL  DP KRI  E+ 
Sbjct: 228 EKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDA 287

Query: 332 KGHEFF 337
             H +F
Sbjct: 288 LKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 250 YVAPEIIEG--KGHDFAVDWWSLGVVLHEMLY-GATPF--RGSSRKETFYRILCRPPDLV 304
           ++APE I         A D WS G  L E+   G  P     SS KE FY+   R P   
Sbjct: 170 WIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMP- 228

Query: 305 GEPTPLRNLIRRLLEKDPTKR 325
            +   L NLI +    DPTKR
Sbjct: 229 -DCAELANLINQCWTYDPTKR 248

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPDLVG 305
           APE ++        D WS GV+L E+   G  P+ G S  E    +     L +PP+   
Sbjct: 172 APESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNC-- 229

Query: 306 EPTPLRNLIRRLLEKDPTKR 325
            P  L  L+ +   +DP  R
Sbjct: 230 -PPELYKLMLQCWAEDPEDR 248

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPDLVG 305
           APE ++        D WS GV+L E+   G  P+ G S +E    +     L +PP+   
Sbjct: 171 APESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNC-- 228

Query: 306 EPTPLRNLIRRLLEKDPTKR 325
            P  L +L+ +   +DP  R
Sbjct: 229 -PPELYDLMLQCWAEDPEDR 247

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 14/154 (9%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK-YRRISFEQRVLRN 82
           +G GA+G+V    D  + ++ A+K        K S+   N  +  + YR    E  +++ 
Sbjct: 24  IGSGAQGIVCAAYDTVTGQNVAIK--------KLSRPFQNVTHAKRAYR----ELVLMKL 71

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFYAAELVLAL 141
           V H  +  L  V +  K +    D     +L      Q  QM  D + + +   +++  +
Sbjct: 72  VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGI 131

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           ++LH+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 132 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 165

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 15/169 (8%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL---TNNDNGDKYRRISF--EQR 78
           LG G  G V L  + E  E F  K    D+   +   +      ++ +K  R  F  E +
Sbjct: 13  LGEGQFGEVHLC-EAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDD-------T 129
           ++  ++ P + RL  V  T   +    +Y    DL+    R +  E     D       T
Sbjct: 72  IMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYST 131

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
           + F A ++   ++YL ++  V+RDL   N ++ +N  I + DF +S  L
Sbjct: 132 LIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNL 180

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 25/100 (25%), Positives = 50/100 (50%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           E  V++ ++HP L +L GV + +       ++    +L    ++ + Q  +   + + A 
Sbjct: 52  EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 111

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           ++  A+EYL     ++RDL   N ++ EN  + + DF LS
Sbjct: 112 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 151

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 42.6 bits (100), Expect = 2e-04
 Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 22/139 (15%)

Query: 59  KELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL-- 116
           K L  N +  + R +  E  +L+ V HP + +L G  S D  +   ++Y     L S   
Sbjct: 36  KMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLR 95

Query: 117 --RK-----------QQSEQMFSDDT-------IRFYAAELVLALEYLHNMGIVYRDLKP 156
             RK           + S  + + D        +  +A ++   ++YL  M +V+RDL  
Sbjct: 96  ESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAA 155

Query: 157 ENIMIQENGHIMLVDFDLS 175
            N+++ E   + + DF LS
Sbjct: 156 RNVLVAEGRKMKISDFGLS 174

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 20/169 (11%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS-----KELTNNDNGDKYRR 72
           L  +  LG GA G V+             K +W    EK       K L    +    + 
Sbjct: 9   LEKIKVLGSGAFGTVY-------------KGVWIPEGEKVKIPVAIKVLREETSPKANKE 55

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           I  E  V+ +V+HP + RL G+  + + V       P   L    +   + + S   + +
Sbjct: 56  ILDEAYVMASVDHPHVVRLLGICLSSQ-VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW 114

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK 181
              ++   + YL    +V+RDL   N++++   H+ + DF L+  L   
Sbjct: 115 -CVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 42.1 bits (100), Expect = 3e-04
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPT 308
           APE ++        D WS GV+L E+   G  P+ G S +E    +    R P     P 
Sbjct: 172 APESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPD 231

Query: 309 PLRNLIRRLLEKDPTKR 325
            L  L+ +    DP  R
Sbjct: 232 ELYELMLQCWAYDPEDR 248

Length = 258

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 32/183 (17%)

Query: 11  RSLD-FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           RS+D +  L  +     G  GVV+  +D ++ E  ALK +      K  KE         
Sbjct: 2   RSVDEYEKLNRIE---EGTYGVVYRARDKKTGEIVALKKL------KMEKE--------- 43

Query: 70  YRRISF------EQRVLRNVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSLRKQQS 121
             +  F      E  +L  ++HP +  ++ V+  S    +   ++Y    DL SL +   
Sbjct: 44  --KEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMK 100

Query: 122 EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL-SP 180
           +  F    ++    +L+  + +LH+  I++RDLK  N+++   G + + DF L+ +  SP
Sbjct: 101 QP-FLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159

Query: 181 KTP 183
             P
Sbjct: 160 LKP 162

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 38/122 (31%)

Query: 250 YVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APE++ G  H    VD WS+G +  EM      F G S  +    I      L+G PT
Sbjct: 177 YRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF----KLLGTPT 232

Query: 309 P--------LRN-------------------------LIRRLLEKDPTKRIGVEEIKGHE 335
                    LR+                         L++++L  DP KRI  +    H 
Sbjct: 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHP 292

Query: 336 FF 337
           +F
Sbjct: 293 YF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 42.0 bits (98), Expect = 4e-04
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 237 SSEKSNSFVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
           + ++   +V T  Y APEI+    H +  VD WS+G ++ E+L G   F G+   +   R
Sbjct: 168 ADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKR 227

Query: 296 ILCRPPDLVGEPTP 309
           I+    ++VG P+P
Sbjct: 228 IM----EVVGTPSP 237

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 18/139 (12%)

Query: 52  DLIEKKSKELTNNDNGDKYRRISFEQRVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCP- 109
           D   K+ KE  + D+   +R  + E  VL +   HP +  L G      ++  AI+Y P 
Sbjct: 36  DAAIKRMKEYASKDD---HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 92

Query: 110 GRDLHSLRKQQ-------------SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKP 156
           G  L  LRK +             +    S   +  +AA++   ++YL     ++RDL  
Sbjct: 93  GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 152

Query: 157 ENIMIQENGHIMLVDFDLS 175
            NI++ EN    + DF LS
Sbjct: 153 RNILVGENYVAKIADFGLS 171

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 20/165 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           ++ S L  +  LG G  GVV L K             WR  I+   K +   + G     
Sbjct: 1   INPSELTFMKELGSGQFGVVHLGK-------------WRAQIKVAIKAI---NEGAMSEE 44

Query: 73  ISFEQ-RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTI 130
              E+ +V+  + HP L +L GV +  K +    ++   G  L+ LR++Q +   S D +
Sbjct: 45  DFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGK--LSKDML 102

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                ++   +EYL     ++RDL   N ++   G + + DF ++
Sbjct: 103 LSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMT 147

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 41.6 bits (97), Expect = 5e-04
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 237 SSEKSNSFVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
           + ++   +V T  Y APEI+    H +  VD WS+G ++ E+L G T F G+   +    
Sbjct: 170 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 229

Query: 296 ILCRPPDLVGEPTPLRNLIRRL 317
           IL     LVG P     L++++
Sbjct: 230 IL----RLVGTPGA--ELLKKI 245

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 8   RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG 67
           R ++  +F  +++   LG GA G V+    +   E   + V  ++L E  S +       
Sbjct: 2   RILKETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN----- 53

Query: 68  DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
              + I  E  V+ +V++P + RL G+  T   V       P   L    ++  + + S 
Sbjct: 54  ---KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQ 109

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
             +  +  ++   + YL    +V+RDL   N++++   H+ + DF L+  L 
Sbjct: 110 YLLN-WCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 47/254 (18%), Positives = 97/254 (38%), Gaps = 60/254 (23%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           E  +++ ++H  L RL  V++ ++ +    +Y   G  L  L+  +  ++     I F +
Sbjct: 51  EANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-S 109

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
           A++   + Y+     ++RDL+  N+++ E+    + DF L+                   
Sbjct: 110 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR------------------ 151

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                                +ED  ++ R G   P +                 + APE
Sbjct: 152 --------------------VIEDNEYTAREGAKFPIK-----------------WTAPE 174

Query: 255 IIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLR 311
            I         D WS G++L+E++ YG  P+ G S  +    +    R P +   P  L 
Sbjct: 175 AINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELY 234

Query: 312 NLIRRLLEKDPTKR 325
           ++++   ++   +R
Sbjct: 235 DIMKTCWKEKAEER 248

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 41.2 bits (97), Expect = 6e-04
 Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 40/125 (32%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APE++ G   +  A+D W++G +L E+L       G S  E    I+     L+G P 
Sbjct: 174 YRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLII----QLLGTPN 229

Query: 309 ---------------------PLRNLIRR--------------LLEKDPTKRIGVEEIKG 333
                                P  NL  +              LL  DP KR   EE   
Sbjct: 230 ESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289

Query: 334 HEFFK 338
             +FK
Sbjct: 290 SSYFK 294

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 41.1 bits (96), Expect = 6e-04
 Identities = 16/47 (34%), Positives = 30/47 (63%)

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
           I+    +++  LEY+H  GI + D+KPENIM+  N    ++D+ +++
Sbjct: 128 IKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIAS 174

Length = 294

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 40.6 bits (96), Expect = 7e-04
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 106 DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI-QEN 164
           DY    DL  L K   E   S+  ++    +LV AL  LH   I++ D+K EN++  +  
Sbjct: 89  DYIKDGDLFDLLK--KEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK 146

Query: 165 GHIMLVDFDLS 175
             I L D+ L 
Sbjct: 147 DRIYLCDYGLC 157

Length = 267

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 40.6 bits (96), Expect = 8e-04
 Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 34/127 (26%)

Query: 244 FVGTEEYVAPEII-EGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRILC--- 298
           +V T  Y APEI+     +   VD W+LG ++ E LY   P F GSS  +  Y+I     
Sbjct: 158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAE-LYTLRPLFPGSSEIDQLYKICSVLG 216

Query: 299 --------RPPDLVG---------EPTPLR-----------NLIRRLLEKDPTKRIGVEE 330
                       L            PT L            +LI+ +L  DP KR    +
Sbjct: 217 TPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQ 276

Query: 331 IKGHEFF 337
              H +F
Sbjct: 277 ALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 266 DWWSLGVVLHEML-YGATPFRGSSRKETFYRI----LCRPPDLVGEPTPLRNLIRRLLEK 320
           D W+ GVVL E+  YG  P+ G + +E  Y +    +   PD    P  L NL+R    K
Sbjct: 214 DVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPD--NCPLELYNLMRLCWSK 271

Query: 321 DPTKRIGVEEI 331
            P+ R     I
Sbjct: 272 LPSDRPSFASI 282

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 41.0 bits (96), Expect = 8e-04
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 18/111 (16%)

Query: 70  YRRISFEQRVLRNVEHP-LLPRL--RGV-----LSTDKFVGYAIDYCPGRDLHSLRKQQS 121
           Y     E R+LR + HP +L  L  R V     L   K+      Y  G  L  L   Q 
Sbjct: 204 YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYL-GARLRPLGLAQ- 261

Query: 122 EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
                   +   A +L+ A++Y+H  GI++RD+K EN+++     I L DF
Sbjct: 262 --------VTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDF 304

Length = 461

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 40.5 bits (95), Expect = 9e-04
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%)

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPDL 303
           ++APE I  +    A D W  GV + E+L  G  PF+G    +   RI     L  PP+ 
Sbjct: 174 WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNC 233

Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIK 332
              P  L +L+ +    DP+KR    E+K
Sbjct: 234 ---PPTLYSLMTKCWAYDPSKRPRFTELK 259

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 40.6 bits (95), Expect = 9e-04
 Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 1/52 (1%)

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLS 179
           TI+ +  +L+  + + H  G+++RDLKP+N+++ +   ++ + D  L    S
Sbjct: 111 TIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS 162

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 96  STDKFVGYAIDYCPGRDLHSLRKQQSEQM--FSDDTIRFYAAELVLALEYLHNMGIVYRD 153
           S DK +   ++Y  G DL+   KQ+ ++   F +  +     ++VLAL+ +H+  +++RD
Sbjct: 136 SDDKLL-LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRD 194

Query: 154 LKPENIMIQENGHIMLVDFDLSTKLS 179
           LK  NI +   G I L DF  S + S
Sbjct: 195 LKSANIFLMPTGIIKLGDFGFSKQYS 220

Length = 478

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 40.5 bits (94), Expect = 0.001
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)

Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+     F G    + + +++    + 
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 233

Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
           +G P P     L+  +R  +E  P
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRP 257

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 20/174 (11%)

Query: 10  IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           +R L  + L+ V  LG GA G V+    V   E+  + V         + ++ N   G K
Sbjct: 1   LRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPV---------AIKILNETTGPK 51

Query: 70  YRRISF--EQRVLRNVEHPLLPRLRGVL--STDKFVGYAIDY-CPGRDLHSLRKQQSEQM 124
              + F  E  ++ +++HP L RL GV    T + V   + + C    +H  +     Q+
Sbjct: 52  -ANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQL 110

Query: 125 FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
             +     +  ++   + YL    +V+RDL   N++++   H+ + DF L+  L
Sbjct: 111 LLN-----WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 70/321 (21%), Positives = 122/321 (38%), Gaps = 87/321 (27%)

Query: 24  LGRGAKGVV---FLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           LG+G  G V    L  +  S +  A+K++  D+        +++D  +  R  +     +
Sbjct: 7   LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-------SSSDIEEFLREAAC----M 55

Query: 81  RNVEHPLLPRLRGVLSTDKFVG------YAIDYCPGRDLHS--LRKQQSEQMF--SDDTI 130
           +  +HP + +L GV    +  G        + +    DLH+  L  +  E+ F     T+
Sbjct: 56  KEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTL 115

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
             +  ++   +EYL +   ++RDL   N M+ EN  + + DF LS K+            
Sbjct: 116 VRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIY----------- 164

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
                 SG   R+   SK     ++LE             S +D+  +  S         
Sbjct: 165 ------SGDYYRQGCASKLPVKWLALE-------------SLADNVYTTHS--------- 196

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF-YRI----LCRPPDLV 304
                          D W+ GV + E M  G TP+ G    E + Y I    L +PPD +
Sbjct: 197 ---------------DVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCL 241

Query: 305 GEPTPLRNLIRRLLEKDPTKR 325
            +   +  L+ +    +P  R
Sbjct: 242 ED---VYELMCQCWSPEPKCR 259

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 33/186 (17%)

Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND---------- 65
             L  V  LG G  G V L       E+  L+    D  EK   E  N D          
Sbjct: 5   QPLNFVEKLGEGQFGEVHL------CEADGLQ----DFSEKAFAENDNADAPVLVAVKVL 54

Query: 66  --NGDKYRRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQ 120
             +     R  F  E ++L  +  P + RL GV + D  +   ++Y    DL   L+K  
Sbjct: 55  RPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHV 114

Query: 121 SE--------QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
           +E        +  S  T+ + A ++   + YL ++  V+RDL   N ++ +N  I + DF
Sbjct: 115 AETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADF 174

Query: 173 DLSTKL 178
            +S  L
Sbjct: 175 GMSRNL 180

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           E R+L+   HP + RL GV +  + +   ++   G D  +  + +  ++   + I+    
Sbjct: 43  EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQM-VE 101

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                +EYL +   ++RDL   N ++ E   + + DF +S
Sbjct: 102 NAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMS 141

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 5/67 (7%)

Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V T  Y APE+I    H +  VD WS+G ++ EML G T F+G    +   +IL     
Sbjct: 174 YVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL----K 229

Query: 303 LVGEPTP 309
           + G P P
Sbjct: 230 VTGVPGP 236

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 29/160 (18%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE-QR 78
            +  L  G    V+L+      E + LK+               +      R       +
Sbjct: 2   SIKLLKGGLTNRVYLLGT--KDEDYVLKIN-------------PSREKGADREREVAILQ 46

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L     P+ P++     +D +    +++  G  L  + +++ E           A +L 
Sbjct: 47  LLARKGLPV-PKVLASGESDGWSYLLMEWIEGETLDEVSEEEKED---------IAEQLA 96

Query: 139 LALEYLHNM---GIVYRDLKPENIMIQENGHIMLVDFDLS 175
             L  LH +    + + DL P NI++ +   + ++D++ +
Sbjct: 97  ELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYA 136

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 18/109 (16%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFV---------GYAIDYCPGRDLHSLRKQQSEQMFS 126
           E  V+  + HP L +L GV+     +         G  +DY   R    +   Q +  F+
Sbjct: 50  EASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQ-QLGFA 108

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            D            +EYL     V+RDL   N+++ E+    + DF L+
Sbjct: 109 LDVCE--------GMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLA 149

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 49/199 (24%), Positives = 69/199 (34%), Gaps = 65/199 (32%)

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            ++YL  M  V+RDL   NI++  N    + DF LS +L                T+ G 
Sbjct: 118 GMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA--------TYTTKGG- 168

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                                   +I    P R                 + APE I  +
Sbjct: 169 ------------------------KI----PIR-----------------WTAPEAIAYR 183

Query: 260 GHDFAVDWWSLGVVLHE-MLYGATPFRGSSRK------ETFYRILCRPPDLVGEPTPLRN 312
               A D WS G+V+ E M YG  P+   S +      E  YR L  P D    P+ L  
Sbjct: 184 KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR-LPPPMDC---PSALYQ 239

Query: 313 LIRRLLEKDPTKRIGVEEI 331
           L+    +KD  +R    +I
Sbjct: 240 LMLDCWQKDRNERPTFSQI 258

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 40.1 bits (93), Expect = 0.002
 Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 55/143 (38%)

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           +L+ A+EY+H+  +++RD+K ENI +  +G I+L DF  +                    
Sbjct: 275 QLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAM------------------- 315

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                                  P    R   D               +VGT    +PEI
Sbjct: 316 -----------------------PFEKEREAFD-------------YGWVGTVATNSPEI 339

Query: 256 IEGKGHDFAVDWWSLGVVLHEML 278
           + G G+    D WS G++L +ML
Sbjct: 340 LAGDGYCEITDIWSCGLILLDML 362

Length = 501

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 34/165 (20%), Positives = 75/165 (45%), Gaps = 26/165 (15%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
            G+  KG +F     E +++ A+K + +D  E   +E        +++    E  +   +
Sbjct: 18  FGKVYKGHLFGTAPGEQTQAVAIKTL-KDKAEGPLRE--------EFKH---EAMMRSRL 65

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS---LRKQQSEQMFSDD--TIR------- 131
           +HP +  L GV++ ++ +     YC   DLH    +R   S+   +DD  T++       
Sbjct: 66  QHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPAD 125

Query: 132 --FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
                 ++   +E+L +  +V++DL   N+++ +  ++ + D  L
Sbjct: 126 FVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGL 170

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 10/82 (12%)

Query: 250 YVAPEIIE-GKGHDFAVDWWSLGVVLHEMLY-GATPFRGS--SRKETFYRILCRP--PDL 303
           ++APE +E  K    A D WS G  L E+ Y G  P +    + KE FY   C    P  
Sbjct: 174 WIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPSC 233

Query: 304 VGEPTPLRNLIRRLLEKDPTKR 325
                 L +L+   +  DP +R
Sbjct: 234 ----KELADLMTHCMNYDPNQR 251

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 76  EQRVLRNVEHPLLPRLRGVLST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
           E  +L+ + H  + + +G  S    K +   ++Y P   L SLR    +   +   +  +
Sbjct: 56  EINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVP---LGSLRDYLPKHKLNLAQLLLF 112

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           A ++   + YLH+   ++RDL   N+++  +  + + DF L+
Sbjct: 113 AQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLA 154

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 39.3 bits (91), Expect = 0.002
 Identities = 57/272 (20%), Positives = 96/272 (35%), Gaps = 83/272 (30%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
           E ++++ + H  L  L  V+S +           G  +D+    D   L+  Q   M   
Sbjct: 51  EAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDM--- 107

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
                 AA++   + Y+  M  ++RDL+  NI++ +N    + DF L+            
Sbjct: 108 ------AAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLAR----------- 150

Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT 247
                                       +ED  ++ R G   P +               
Sbjct: 151 ---------------------------LIEDNEYTARQGAKFPIK--------------- 168

Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETF------YRILCRP 300
             + APE           D WS G++L E++  G  P+ G   +E        YR+ C  
Sbjct: 169 --WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPC-- 224

Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK 332
           P   G P  L  L++   +KDP +R   E I+
Sbjct: 225 PQ--GCPESLHELMKLCWKKDPDERPTFEYIQ 254

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL----CRPPDLV 304
           ++APE ++        D WS GVVL EM      P++G S +E    ++       P+  
Sbjct: 187 WMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPE-- 244

Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEI 331
             P  L  L+R   + +P  R    EI
Sbjct: 245 NCPDKLLELMRMCWQYNPKMRPTFLEI 271

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 21/153 (13%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           ++  L  G++G VF+       +   LK      I +K   L              E  +
Sbjct: 70  VIKTLTPGSEGRVFVATKPGQPDPVVLK------IGQKGTTL-------------IEAML 110

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L+NV HP + R++  L +       + +    DL++   ++S  +  D  +      L  
Sbjct: 111 LQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILE- 168

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
            L YLH   I++RD+K ENI I +   + + D 
Sbjct: 169 GLRYLHAQRIIHRDVKTENIFINDVDQVCIGDL 201

Length = 357

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 44/142 (30%)

Query: 140 ALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
           AL+Y H  + +++ DLKPENI+++ +           T + P T +A P           
Sbjct: 243 ALDYFHTELHLMHTDLKPENILMETS----------DTVVDPVTNRALPP--------DP 284

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
            + R   L   C       D  HS                    + V T  Y +PE++ G
Sbjct: 285 CRVRICDLGGCC-------DERHS------------------RTAIVSTRHYRSPEVVLG 319

Query: 259 KGHDFAVDWWSLGVVLHEMLYG 280
            G  ++ D WS+G +++E+  G
Sbjct: 320 LGWMYSTDMWSMGCIIYELYTG 341

Length = 467

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           E  +L+  +HP + +L GV    K   Y + +  PG  L +  +++  ++     ++  +
Sbjct: 42  EAEILKQYDHPNIVKLIGV-CVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQM-S 99

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +    +EYL +   ++RDL   N ++ EN  + + DF +S
Sbjct: 100 LDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMS 140

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 51/162 (31%)

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
           S+  I +    ++ AL+Y+H+MG V+R +K  +I+I  +G + L                
Sbjct: 99  SELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYL---------------- 142

Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV 245
                      SG++   S ++      +  + P +S ++ P                  
Sbjct: 143 -----------SGLRSNLSMINHGQRLRVVHDFPKYSVKVLP------------------ 173

Query: 246 GTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFR 285
               +++PE+++   +G+D   D +S+G+   E+  G  PF+
Sbjct: 174 ----WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|151200 pfam10707, YrbL-PhoP_reg, PhoP regulatory network protein YrbL

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 17/101 (16%)

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAI------DYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           R ++   +PR  G + TD  +G         D      L  L K       +        
Sbjct: 72  RGIDWSPIPRYYGFVETDLGLGLVTERIRDADGNISPTLEDLLK---NGGLTAA----LR 124

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENG----HIMLVD 171
             L     YL +  IV RDL P NI+          ++LVD
Sbjct: 125 EALNEFKRYLLDNHIVARDLNPHNIVYGRRSEGEYELVLVD 165

This is a family of proteins that are activated by PhoP. PhoP protein controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multicomponent loop in Salmonella where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner. Length = 199

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 32/124 (25%)

Query: 247 TEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGS---------------SRK 290
           T+ Y +P ++    +   A+D W+ G +  EML G   F G+                R+
Sbjct: 181 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE 240

Query: 291 ETFYRILCRPPDLV----GEP-TPLR-----------NLIRRLLEKDPTKRIGVEEIKGH 334
           E    +L   P  V    GEP  PLR           + + ++L  +P  R+  EE   H
Sbjct: 241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300

Query: 335 EFFK 338
            +  
Sbjct: 301 PYMS 304

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 11/90 (12%)

Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
           ++ APE +    +    D WS G++L E    G TP+ G S ++T       YR+    P
Sbjct: 160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPA--P 217

Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
            L   P  +  L+ +    DP  R    EI
Sbjct: 218 QLC--PEEIYRLMLQCWAYDPENRPSFSEI 245

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	426
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	100.0
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.98
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.96
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.96
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.95
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.95
PRK09188	365	serine/threonine protein kinase; Provisional	99.95
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.95
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.92
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.92
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.92
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.92
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.91
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.91
PRK12274	218	serine/threonine protein kinase; Provisional	99.9
PRK10345	210	hypothetical protein; Provisional	99.88
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.87
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.86
smart00090	237	RIO RIO-like kinase.	99.86
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.86
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.83
PRK14879	211	serine/threonine protein kinase; Provisional	99.83
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.83
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.82
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.81
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.79
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.78
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.77
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.76
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.7
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.7
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.59
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.59
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.54
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.51
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.5
KOG1243	690	consensus Protein kinase [General function predict	99.5
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.49
KOG3087	229	consensus Serine/threonine protein kinase [General	99.27
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.26
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.24
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.24
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.19
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.14
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.11
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.96
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.93
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.91
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.88
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.74
PRK09902	216	hypothetical protein; Provisional	98.73
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.7
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.65
COG4248	637	Uncharacterized protein with protein kinase and he	98.58
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.51
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.48
PF01636	239	APH: Phosphotransferase enzyme family This family	98.46
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.37
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.28
PLN02876	822	acyl-CoA dehydrogenase	98.22
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.22
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.15
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.12
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	98.09
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.94
PRK10593	297	hypothetical protein; Provisional	97.84
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.81
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.8
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.78
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.72
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.65
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.62
PRK05231	319	homoserine kinase; Provisional	97.6
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.59
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.25
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.23
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.19
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.07
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.06
PRK12396	409	5-methylribose kinase; Reviewed	97.04
KOG2270	520	consensus Serine/threonine protein kinase involved	97.03
PLN02236	344	choline kinase	97.0
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.71
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.48
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.42
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.38
PLN02756	418	S-methyl-5-thioribose kinase	96.22
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.06
PTZ00384	383	choline kinase; Provisional	95.95
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.63
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	95.61
PRK11768	325	serine/threonine protein kinase; Provisional	95.55
PRK06148	1013	hypothetical protein; Provisional	95.54
PTZ00296	442	choline kinase; Provisional	94.93
PHA03111	444	Ser/Thr kinase; Provisional	94.28

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.4e-72  Score=521.44  Aligned_cols=341  Identities=43%  Similarity=0.774  Sum_probs=277.7

Q ss_pred             CCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344            8 RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus         8 ~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      .+...|.+++|++++.||.|.-|+||+|+...++..+|+||+.|+.+.++          ..+.+++.|.+||+.++||+
T Consensus        69 ~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~r----------kKl~Ra~tE~eIL~~lDHPF  138 (459)
T KOG0610|consen   69 SKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASR----------KKLKRAQTEREILSLLDHPF  138 (459)
T ss_pred             cCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhh----------hHHHHHHHHHHHHHhcCCCc
Confidence            34577999999999999999999999999999999999999999888765          36788999999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ++.||..|+++++.|+|||||+||+|+.+++++..+.|++..+++|+++++.||+|||-+|||+||||||||||.++|||
T Consensus       139 lPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHI  218 (459)
T KOG0610|consen  139 LPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHI  218 (459)
T ss_pred             cchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccc-cccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK-KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +|+||.|+.......+.............+... .+.+-+...|.+..............+.+. ........++++|||
T Consensus       219 MLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~-~~aep~~~RSnSFVG  297 (459)
T KOG0610|consen  219 MLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPE-LVAEPTGARSNSFVG  297 (459)
T ss_pred             EeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchh-hhcCCCCcccccccc
Confidence            999999998873221111110000000000000 001111111222211111000000011111 112345678999999


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCC---HHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP---TPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---~~~~~li~~~L~~dP~  323 (426)
                      |-.|+|||++.|.+++.++|||+|||++|||++|..||.|.+.++++.+|+..+..+++.+   ..++|||+++|.+||+
T Consensus       298 ThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~  377 (459)
T KOG0610|consen  298 THEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPS  377 (459)
T ss_pred             ccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChh
Confidence            9999999999999999999999999999999999999999999999999999998888776   8899999999999999


Q ss_pred             CCCC----hHHHhcCCCcCCCChhhhhhccCCCCCCCCCCC
Q 014344          324 KRIG----VEEIKGHEFFKGVNWELLLKISRPPNIPARFEH  360 (426)
Q Consensus       324 ~R~s----~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~  360 (426)
                      +|+.    |.||.+||||++++|+ +.+..+||.+|.....
T Consensus       378 kRlg~~rGA~eIK~HpFF~gVnWa-Lir~~~PP~iP~~~d~  417 (459)
T KOG0610|consen  378 KRLGSKRGAAEIKRHPFFEGVNWA-LIRCARPPEIPKPVDG  417 (459)
T ss_pred             hhhccccchHHhhcCccccCCChh-heeccCCCcCCCcccc
Confidence            9998    9999999999999999 6688899999977543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-68  Score=492.61  Aligned_cols=275  Identities=41%  Similarity=0.723  Sum_probs=250.4

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ....++|+++++||+|+||+||+|+.+.+++.||+|++.|..+..+          ...+....|..||..++||+||.+
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~----------~e~~~~~~Er~IL~~v~hPFiv~l   90 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK----------KEVRHTKAERNILSKIKHPFIVKL   90 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh----------hhHHHHHHHHHHHHhCCCCcEeee
Confidence            5778999999999999999999999999999999999999887665          245678889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +..|++...+|+|+||+.||+|+..+++.+  .|+++.+++|+++|+.||.|||++||||||||||||||+.+|||+|+|
T Consensus        91 ~ysFQt~~kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtD  168 (357)
T KOG0598|consen   91 IYSFQTEEKLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTD  168 (357)
T ss_pred             EEecccCCeEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEec
Confidence            999999999999999999999999888754  499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+....                                                        .+..+.++|||+.||
T Consensus       169 FgL~k~~~~--------------------------------------------------------~~~~t~tfcGT~eYm  192 (357)
T KOG0598|consen  169 FGLCKEDLK--------------------------------------------------------DGDATRTFCGTPEYM  192 (357)
T ss_pred             cccchhccc--------------------------------------------------------CCCccccccCCcccc
Confidence            999985431                                                        223566799999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCC-CCHHHHHHHHHHhccCCCCCC---
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PDLVG-EPTPLRNLIRRLLEKDPTKRI---  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~-~~~~~~~li~~~L~~dP~~R~---  326 (426)
                      |||++.+.+|+.++|||||||++|||++|.+||.+.+....+.+|+..+ +..+. .+..+++||+++|.+||++|+   
T Consensus       193 APEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~  272 (357)
T KOG0598|consen  193 APEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGP  272 (357)
T ss_pred             ChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCC
Confidence            9999999999999999999999999999999999999999999999877 55555 688999999999999999997   


Q ss_pred             -ChHHHhcCCCcCCCChhhhhhccCCCCC
Q 014344          327 -GVEEIKGHEFFKGVNWELLLKISRPPNI  354 (426)
Q Consensus       327 -s~~eil~hp~f~~~~~~~~~~~~~~~~~  354 (426)
                       .+.+|.+||||++++|+.+......|.+
T Consensus       273 ~d~~~ik~HpfF~~inW~~l~~k~l~PpF  301 (357)
T KOG0598|consen  273 GDAEEIKRHPFFKGINWEKLLAKKLSPPF  301 (357)
T ss_pred             CChHHhhcCcccccCCHHHHHhcCCCCCe
Confidence             5899999999999999999875554433

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=2.7e-68  Score=510.20  Aligned_cols=318  Identities=34%  Similarity=0.596  Sum_probs=254.3

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+.+++|++++.||+|+||.||+|+.+.||+.||+|++.|+...++          .+...+..|..||...++|+||+|
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~----------~Qv~hV~aERdiL~~~ds~~vVKL  206 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKK----------NQVEHVRAERDILAEVDSPWVVKL  206 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhh----------hhHHHHHHHHHHhhhcCCCcEEEE
Confidence            5788999999999999999999999999999999999999877665          367889999999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +..|++..++||||||++|||+.+++.+.  +.|++..+++|+++++.|++.||++|||||||||+|+|||..|||||+|
T Consensus       207 yYsFQD~~~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSD  284 (550)
T KOG0605|consen  207 YYSFQDKEYLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSD  284 (550)
T ss_pred             EEEecCCCeeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeecc
Confidence            99999999999999999999999998765  4599999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCC--CCCCCCCCCCCC---CCCCCCCCcccccc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPV--HSPRIGPDPPSR---SDSDSSEKSNSFVG  246 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~g  246 (426)
                      ||||+.+..........              .........++....+..  ..++.+..+...   -.........+.||
T Consensus       285 FGLs~gl~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVG  350 (550)
T KOG0605|consen  285 FGLSTGLDKKHRIESYR--------------LDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVG  350 (550)
T ss_pred             ccccchhhhhhhhhhhc--------------chhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccC
Confidence            99998765432111000              000000000000000000  000000000000   00112345667899


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~d  321 (426)
                      ||.|||||++.+.+|+..+||||||||+||||.|.+||.+.++.+++.+|+...     |.-...+.+++|||.+||. |
T Consensus       351 TPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d  429 (550)
T KOG0605|consen  351 TPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-D  429 (550)
T ss_pred             CccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-C
Confidence            999999999999999999999999999999999999999999999999987332     3333557899999999999 9


Q ss_pred             CCCCCC---hHHHhcCCCcCCCChhhhhhccCCCCCCCC
Q 014344          322 PTKRIG---VEEIKGHEFFKGVNWELLLKISRPPNIPAR  357 (426)
Q Consensus       322 P~~R~s---~~eil~hp~f~~~~~~~~~~~~~~~~~~~~  357 (426)
                      |.+|+.   ++||.+||||++++|+.+.+.. ||++|..
T Consensus       430 ~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~-apfvP~v  467 (550)
T KOG0605|consen  430 PENRLGSKGAEEIKKHPFFKGVDWDHLREMP-APFVPQV  467 (550)
T ss_pred             HHHhcCcccHHHHhcCCccccCCcchhhcCC-CCCCCCC
Confidence            999995   8999999999999999997765 6666644

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-67  Score=466.25  Aligned_cols=283  Identities=39%  Similarity=0.705  Sum_probs=255.9

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ..+..+++|+++++||.|+||.|.+++++.+|..||+|++++..+.+.          .+.+...+|.++|+.+.||+++
T Consensus        38 ~~~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVkl----------KQveH~~nEk~vL~~v~~PFlv  107 (355)
T KOG0616|consen   38 QNPYSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKL----------KQVEHTHNEKRVLKAVSHPFLV  107 (355)
T ss_pred             CCCcchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHH----------HHHHHHhhHHHHHhhccCceeE
Confidence            445899999999999999999999999999999999999999887665          2567888999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++.|.+.+.+|+||||.+||.|++++++.+  +|++..+++|++||++||+|||+++|++|||||||||+|++|++||
T Consensus       108 ~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKi  185 (355)
T KOG0616|consen  108 KLYGTFKDNSNLYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKI  185 (355)
T ss_pred             EEEEeeccCCeEEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEE
Confidence            99999999999999999999999999988654  4999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|+.+.                                                           .++.+.||||.
T Consensus       186 tDFGFAK~v~-----------------------------------------------------------~rT~TlCGTPe  206 (355)
T KOG0616|consen  186 TDFGFAKRVS-----------------------------------------------------------GRTWTLCGTPE  206 (355)
T ss_pred             EeccceEEec-----------------------------------------------------------CcEEEecCCcc
Confidence            9999999874                                                           24678899999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC-CCHHHHHHHHHHhccCCCCCC--
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG-EPTPLRNLIRRLLEKDPTKRI--  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~--  326 (426)
                      |+|||++..++|+.++|||||||++|||+.|.+||...++..++.+|+.....++. .+++++|||+++|+.|-.+|.  
T Consensus       207 YLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gn  286 (355)
T KOG0616|consen  207 YLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGN  286 (355)
T ss_pred             ccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcC
Confidence            99999999999999999999999999999999999999999999999876655543 378999999999999999995  


Q ss_pred             ---ChHHHhcCCCcCCCChhhhhhc-cCCCCCCCCCCCCCC
Q 014344          327 ---GVEEIKGHEFFKGVNWELLLKI-SRPPNIPARFEHENN  363 (426)
Q Consensus       327 ---s~~eil~hp~f~~~~~~~~~~~-~~~~~~~~~~~~~~~  363 (426)
                         ...+|.+||||++++|+.+... ..+|..|+......+
T Consensus       287 lknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~~~gd  327 (355)
T KOG0616|consen  287 LKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIHGPGD  327 (355)
T ss_pred             cCCCccccccCcccccccHHHHhhccccCCCCCccccCCcc
Confidence               4789999999999999998764 456777755544433

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-65  Score=487.48  Aligned_cols=285  Identities=35%  Similarity=0.632  Sum_probs=251.1

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcce
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPR   90 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~   90 (426)
                      .-..++|.+++.||.|+|++|++|+++.+++.|||||+.|..+.+..          ..+.+..|..+|.+| .||.|++
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~----------KvkYV~~Ek~~l~~L~~hPgivk  138 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEK----------KVKYVTREKEALTQLSGHPGIVK  138 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhc----------ccchhhHHHHHHHHhhCCCCeEE
Confidence            45578999999999999999999999999999999999998887763          456788899999999 7999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      |+..|+++..+|+|+||+++|+|.+++++.+  .|++..+|+|++||+.||+|||++||||||||||||||+.+|++||+
T Consensus       139 Ly~TFQD~~sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikIT  216 (604)
T KOG0592|consen  139 LYFTFQDEESLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKIT  216 (604)
T ss_pred             EEEEeecccceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEe
Confidence            9999999999999999999999999998764  49999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||.|+.+.+......                               .+.            ..........+||||..|
T Consensus       217 DFGsAK~l~~~~~~~~-------------------------------~~~------------~~~~a~s~~~SFVGTAeY  253 (604)
T KOG0592|consen  217 DFGSAKILSPSQKSQE-------------------------------NPV------------DPNQASSRRSSFVGTAEY  253 (604)
T ss_pred             eccccccCChhhcccc-------------------------------Ccc------------CcccccCcccceeeeecc
Confidence            9999999875432110                               000            000011224789999999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ++||++.....++++|+||||||||+|+.|.+||.+.++.-+|++|+..... ..+.++.++|||+++|..||.+|+|++
T Consensus       254 VSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~  333 (604)
T KOG0592|consen  254 VSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQ  333 (604)
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHH
Confidence            9999999999999999999999999999999999999999999999865433 446689999999999999999999999


Q ss_pred             HHhcCCCcCCCChhhhhhccCC
Q 014344          330 EIKGHEFFKGVNWELLLKISRP  351 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~~~~~~  351 (426)
                      +|.+||||.+++|+++.+...|
T Consensus       334 qIk~HpFF~~Vdw~nlw~~~PP  355 (604)
T KOG0592|consen  334 QIKAHPFFEGVDWENLWQQTPP  355 (604)
T ss_pred             HHhhCcccccCChhhhhhcCCC
Confidence            9999999999999998765544

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4e-62  Score=479.74  Aligned_cols=278  Identities=36%  Similarity=0.680  Sum_probs=248.6

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcc
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLP   89 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv   89 (426)
                      ..+.+++|+++++||+|+||+|++|..+.+++.||||+++|..+-.+          +.....+.|.+|+.... ||+++
T Consensus       363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~----------d~Ve~~~~EkrI~~la~~HPFL~  432 (694)
T KOG0694|consen  363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQR----------DEVESLMCEKRIFELANRHPFLV  432 (694)
T ss_pred             CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceecc----------ccHHHHHHHHHHHHHhccCCeEe
Confidence            46889999999999999999999999999999999999988776443          45678888999999886 99999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      .++.+|++.+++|+||||+.|||+..++   ..+.|++..+++|+++|+.||+|||++||||||||.+|||||.+|++||
T Consensus       433 ~L~~~fQT~~~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~ki  509 (694)
T KOG0694|consen  433 NLFSCFQTKEHLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKI  509 (694)
T ss_pred             ecccccccCCeEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEe
Confidence            9999999999999999999999955432   3355999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||||+....                                                        .+.++.+|||||.
T Consensus       510 ADFGlcKe~m~--------------------------------------------------------~g~~TsTfCGTpe  533 (694)
T KOG0694|consen  510 ADFGLCKEGMG--------------------------------------------------------QGDRTSTFCGTPE  533 (694)
T ss_pred             cccccccccCC--------------------------------------------------------CCCccccccCChh
Confidence            99999986431                                                        2346789999999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCC-
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIG-  327 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s-  327 (426)
                      |||||++.+..|+.++|||||||+|||||.|.+||.+.+..+.+..|+...+..+ ..+.++.++|++||+++|++|+. 
T Consensus       534 y~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  534 FLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             hcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            9999999999999999999999999999999999999999999999997766554 45889999999999999999996 


Q ss_pred             ----hHHHhcCCCcCCCChhhhhhcc-CCCCCCCC
Q 014344          328 ----VEEIKGHEFFKGVNWELLLKIS-RPPNIPAR  357 (426)
Q Consensus       328 ----~~eil~hp~f~~~~~~~~~~~~-~~~~~~~~  357 (426)
                          +++|.+||||+.++|+.+.... .||+.|..
T Consensus       614 ~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i  648 (694)
T KOG0694|consen  614 GERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTI  648 (694)
T ss_pred             CCCCchhhhhCCccccCCHHHHhhccCCCCCCccc
Confidence                5899999999999999998754 45555543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-61  Score=471.38  Aligned_cols=255  Identities=30%  Similarity=0.564  Sum_probs=235.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|...+.||+|||+.||.+++..+|+.||+|++.+..+.+.          ....++.+|++|.+.|+|||||+++++|
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~----------~~reKv~~EIeIHr~L~HpnIV~f~~~F   87 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKP----------KQREKVLNEIEIHRSLKHPNIVQFYHFF   87 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCc----------chHHHHHHHHHHHHhcCCCcEEeeeeEe
Confidence            459999999999999999999999999999999988776543          3567899999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ++.+++|||+|+|..++|..+.++  ++.++|.+|+.|++||+.||.|||+++|||||||..|+||+++.+|||+|||||
T Consensus        88 EDs~nVYivLELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLA  165 (592)
T KOG0575|consen   88 EDSNNVYIVLELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLA  165 (592)
T ss_pred             ecCCceEEEEEecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEeccccee
Confidence            999999999999999999999874  456999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      +.+...                                                        .++..++||||.|.|||+
T Consensus       166 t~le~~--------------------------------------------------------~Erk~TlCGTPNYIAPEV  189 (592)
T KOG0575|consen  166 TQLEYD--------------------------------------------------------GERKKTLCGTPNYIAPEV  189 (592)
T ss_pred             eeecCc--------------------------------------------------------ccccceecCCCcccChhH
Confidence            987532                                                        356778999999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +...+|++.+||||+||++|.||+|++||...+-++++.+|....... ...+.+++|||++||+.||.+|||+++||.|
T Consensus       190 l~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  190 LNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             hccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            999999999999999999999999999999999999999997654333 3558899999999999999999999999999


Q ss_pred             CCcC
Q 014344          335 EFFK  338 (426)
Q Consensus       335 p~f~  338 (426)
                      +||+
T Consensus       270 ~Ff~  273 (592)
T KOG0575|consen  270 PFFK  273 (592)
T ss_pred             Hhhh
Confidence            9994

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-62  Score=454.17  Aligned_cols=263  Identities=28%  Similarity=0.427  Sum_probs=226.9

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      -...|.+.+.||+|+||.|-+|..+.||+.||||++.+......+..      ......+.+|++||++|+||+||++++
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~------~~~~~~v~~EieILkkL~HP~IV~~~d  243 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRA------IAKTRDVQNEIEILKKLSHPNIVRIKD  243 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhccccccc------ccchhhhHHHHHHHHhcCCCCEEEEee
Confidence            34568899999999999999999999999999999988765443221      122345789999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC---CcEEEe
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN---GHIMLV  170 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~---g~ikL~  170 (426)
                      +|+.++..|+||||+.||+|++.+-.++  .+.+..-+.+++||+.||.|||++||+||||||+|||+..+   -.+||+
T Consensus       244 ~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKIt  321 (475)
T KOG0615|consen  244 FFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKIT  321 (475)
T ss_pred             eeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEec
Confidence            9999999999999999999999877654  48899999999999999999999999999999999999876   689999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+....                                                         ....+++||||.|
T Consensus       322 DFGlAK~~g~---------------------------------------------------------~sfm~TlCGTpsY  344 (475)
T KOG0615|consen  322 DFGLAKVSGE---------------------------------------------------------GSFMKTLCGTPSY  344 (475)
T ss_pred             ccchhhcccc---------------------------------------------------------ceehhhhcCCccc
Confidence            9999987642                                                         3467789999999


Q ss_pred             ccchhhcCCCC---ChhhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhcC-----CCCCCCCCHHHHHHHHHHhccC
Q 014344          251 VAPEIIEGKGH---DFAVDWWSLGVVLHEMLYGATPFRGSSRKE-TFYRILCR-----PPDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       251 ~aPE~~~~~~~---~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~-----~~~~~~~~~~~~~li~~~L~~d  321 (426)
                      +|||++.+.++   ..++|+||+||+||-+++|.+||.+..... ...+|...     ++.+...+.++.+||.+||..|
T Consensus       345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~Vd  424 (475)
T KOG0615|consen  345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVD  424 (475)
T ss_pred             cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeC
Confidence            99999988764   457899999999999999999999876655 56666543     3444566788999999999999


Q ss_pred             CCCCCChHHHhcCCCcCCCC
Q 014344          322 PTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       322 P~~R~s~~eil~hp~f~~~~  341 (426)
                      |++|||++|+|+||||+...
T Consensus       425 P~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  425 PENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             cccCcCHHHHhcChhhhccc
Confidence            99999999999999998654

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-59  Score=433.47  Aligned_cols=255  Identities=29%  Similarity=0.507  Sum_probs=229.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +..++.+.++.||+|+.|+||+|+++.|++.+|+|++...            .+....+.+.+|++|++.++||+||.+|
T Consensus        76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~------------~~~~~~~Qi~rEl~il~~~~spyIV~~y  143 (364)
T KOG0581|consen   76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN------------IDPALQKQILRELEILRSCQSPYIVGFY  143 (364)
T ss_pred             cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc------------CCHHHHHHHHHHHHHHhhCCCCCeeeEe
Confidence            4556899999999999999999999999999999998321            2344667899999999999999999999


Q ss_pred             eeeecCC-eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEe
Q 014344           93 GVLSTDK-FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        93 ~~~~~~~-~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ++|..+. .++|+||||+||+|.+++...  +.+++.....++.+|+.||.|||+ ++||||||||+|||++..|.||||
T Consensus       144 gaF~~~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKic  221 (364)
T KOG0581|consen  144 GAFYSNGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKIC  221 (364)
T ss_pred             EEEEeCCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEec
Confidence            9999998 499999999999999998765  459999999999999999999995 999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||.++.+..                                                          ..+++++||-.|
T Consensus       222 DFGVS~~lvn----------------------------------------------------------S~a~tfvGT~~Y  243 (364)
T KOG0581|consen  222 DFGVSGILVN----------------------------------------------------------SIANTFVGTSAY  243 (364)
T ss_pred             cccccHHhhh----------------------------------------------------------hhcccccccccc
Confidence            9999987742                                                          156889999999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCC-CCCC-C-CCHHHHHHHHHHhccCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS-----SRKETFYRILCRP-PDLV-G-EPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~-~~~~-~-~~~~~~~li~~~L~~dP  322 (426)
                      ||||.+.+..|+.++||||||++++||++|++||...     +..+.+..|+..+ |.++ + +++++++||.+||++||
T Consensus       244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp  323 (364)
T KOG0581|consen  244 MSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDP  323 (364)
T ss_pred             cChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCc
Confidence            9999999999999999999999999999999999875     5667788888744 3443 2 68999999999999999


Q ss_pred             CCCCChHHHhcCCCcCC
Q 014344          323 TKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~  339 (426)
                      .+|++++|+++|||++.
T Consensus       324 ~~R~s~~qLl~Hpfi~~  340 (364)
T KOG0581|consen  324 SERPSAKQLLQHPFIKK  340 (364)
T ss_pred             ccCCCHHHHhcCHHHhh
Confidence            99999999999999974

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-57  Score=422.87  Aligned_cols=255  Identities=29%  Similarity=0.528  Sum_probs=226.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ..+|.+.++||+|+||+||+|+++.++..||||.+.+..+.++           ..+.+..|+.||+.++|||||.++++
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k-----------~~e~L~~Ei~iLkel~H~nIV~l~d~   77 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKK-----------LVELLLSEIKILKELKHPNIVRLLDC   77 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHH-----------HHHHHHHHHHHHHhcCCcceeeEEEE
Confidence            5689999999999999999999999999999999987765444           34567789999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC------CcEE
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN------GHIM  168 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~------g~ik  168 (426)
                      +.+++.+|||||||.||||.+++++.+  .+++..++.++.||+.||++||+++||||||||+||||+..      -.+|
T Consensus        78 ~~~~~~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LK  155 (429)
T KOG0595|consen   78 IEDDDFIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLK  155 (429)
T ss_pred             EecCCeEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEE
Confidence            999999999999999999999998764  49999999999999999999999999999999999999865      4689


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+|+.+.++                                                         ....+.||+|
T Consensus       156 IADFGfAR~L~~~---------------------------------------------------------~~a~tlcGSp  178 (429)
T KOG0595|consen  156 IADFGFARFLQPG---------------------------------------------------------SMAETLCGSP  178 (429)
T ss_pred             ecccchhhhCCch---------------------------------------------------------hHHHHhhCCc
Confidence            9999999988632                                                         2455678999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCHHHHHHHHHHhccCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV----GEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~li~~~L~~dP~~  324 (426)
                      .|||||++....|+.++|+||+|+|+|+|++|++||...+..+.+..+.......+    ..+.++.+|+..+|+.+|..
T Consensus       179 lYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~  258 (429)
T KOG0595|consen  179 LYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKD  258 (429)
T ss_pred             cccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccc
Confidence            99999999999999999999999999999999999999999999887754432221    23556779999999999999


Q ss_pred             CCChHHHhcCCCcCC
Q 014344          325 RIGVEEIKGHEFFKG  339 (426)
Q Consensus       325 R~s~~eil~hp~f~~  339 (426)
                      |.+..+-+.|+++..
T Consensus       259 ~~~~~~~~~~~~l~~  273 (429)
T KOG0595|consen  259 RISFEDFFDHPFLAA  273 (429)
T ss_pred             cCchHHhhhhhhccc
Confidence            999999999999854

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.2e-57  Score=408.42  Aligned_cols=256  Identities=27%  Similarity=0.478  Sum_probs=220.5

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ++.|+.+.++|+|+||+||+|+++.||+.||||.+.-           ..+++...+-.++|+++|++|+|||+|.++++
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~E-----------sedd~~VkKIAlREIrmLKqLkH~NLVnLiEV   69 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVE-----------SEDDPVVKKIALREIRMLKQLKHENLVNLIEV   69 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeecc-----------CCccHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence            3679999999999999999999999999999999822           22344556778899999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      |.....+++|+|||+..-|..+ +.... .++.+.++.|+.|++.|+.|||++++||||||||||||+.+|.+||||||+
T Consensus        70 FrrkrklhLVFE~~dhTvL~eL-e~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGF  147 (396)
T KOG0593|consen   70 FRRKRKLHLVFEYCDHTVLHEL-ERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGF  147 (396)
T ss_pred             HHhcceeEEEeeecchHHHHHH-HhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchh
Confidence            9999999999999986666665 44433 399999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      |+.+...                                                        +..-+.+|.|.+|+|||
T Consensus       148 AR~L~~p--------------------------------------------------------gd~YTDYVATRWYRaPE  171 (396)
T KOG0593|consen  148 ARTLSAP--------------------------------------------------------GDNYTDYVATRWYRAPE  171 (396)
T ss_pred             hHhhcCC--------------------------------------------------------cchhhhhhhhhhccChh
Confidence            9987521                                                        12345678999999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--------------CCCC-----------------
Q 014344          255 IIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--------------RPPD-----------------  302 (426)
Q Consensus       255 ~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~--------------~~~~-----------------  302 (426)
                      ++.| ..|+..+||||+||++.||++|.+.|++.++.++++.|..              ..+.                 
T Consensus       172 LLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~  251 (396)
T KOG0593|consen  172 LLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLER  251 (396)
T ss_pred             hhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhh
Confidence            9988 7899999999999999999999999999999888776631              1111                 


Q ss_pred             -CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 -LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 -~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                       .++.+..+.||+++||..||.+|++.+++|.||||.+
T Consensus       252 k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  252 KYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             hcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence             1223456889999999999999999999999999964

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-57  Score=464.91  Aligned_cols=278  Identities=35%  Similarity=0.625  Sum_probs=245.0

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .++.++|+|+++||+|+||.|.+|+++.+++.||+|+++|....++.          ...-|..|..||..-+.++|+.+
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~----------~tA~F~EERDimv~~ns~Wiv~L  140 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRA----------ETACFREERDIMVFGNSEWIVQL  140 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhch----------hHHHHHHHhHHHHcCCcHHHHHH
Confidence            36778999999999999999999999999999999999886554432          33568889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +.+|+++.++|+||||++||||-.++....  .+|+..+++|+++|+.||+.||+.|+|||||||+|||||..|||||+|
T Consensus       141 hyAFQD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLAD  218 (1317)
T KOG0612|consen  141 HYAFQDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLAD  218 (1317)
T ss_pred             HHHhcCccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeecc
Confidence            999999999999999999999999987765  599999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||.|..+....                                                       .-.+...||||.|.
T Consensus       219 FGsClkm~~dG-------------------------------------------------------~V~s~~aVGTPDYI  243 (1317)
T KOG0612|consen  219 FGSCLKMDADG-------------------------------------------------------TVRSSVAVGTPDYI  243 (1317)
T ss_pred             chhHHhcCCCC-------------------------------------------------------cEEeccccCCCCcc
Confidence            99998876332                                                       22455668999999


Q ss_pred             cchhhcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCHHHHHHHHHHhccC
Q 014344          252 APEIIEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       252 aPE~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~li~~~L~~d  321 (426)
                      |||++..     ..|+..+||||+||++|||++|..||...+-.++|.+|+..     .|.....|..+++||+++| -+
T Consensus       244 SPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll-~~  322 (1317)
T KOG0612|consen  244 SPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALL-CD  322 (1317)
T ss_pred             CHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHh-cC
Confidence            9999863     45889999999999999999999999999999999999743     2233457899999999998 46


Q ss_pred             CCCCCC---hHHHhcCCCcCCCChhhhhhccCCCCCCCCC
Q 014344          322 PTKRIG---VEEIKGHEFFKGVNWELLLKISRPPNIPARF  358 (426)
Q Consensus       322 P~~R~s---~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~  358 (426)
                      |+.|.+   +++|.+||||.+++|+.+ +...||.+|...
T Consensus       323 ~e~RLgrngiedik~HpFF~g~~W~~i-R~~~pP~vPevs  361 (1317)
T KOG0612|consen  323 REVRLGRNGIEDIKNHPFFEGIDWDNI-RESVPPVVPEVS  361 (1317)
T ss_pred             hhhhcccccHHHHHhCccccCCChhhh-hhcCCCCCCcCC
Confidence            889998   999999999999999876 556788887653

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-57  Score=409.98  Aligned_cols=281  Identities=35%  Similarity=0.639  Sum_probs=249.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+.+++|..+++||+|.||+|.+|+.+.+++.||||++.|+.+..+          +.......|-++|+..+||++.
T Consensus       162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiak----------dEVAHTlTE~RVL~~~~HPFLt  231 (516)
T KOG0690|consen  162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAK----------DEVAHTLTENRVLQNCRHPFLT  231 (516)
T ss_pred             cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeeh----------HHhhhhhhHHHHHHhccCcHHH
Confidence            455788999999999999999999999999999999999988877554          3456677899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      .+-..|++...+|+||||+.||.|+-.+.+  .+.|++..+++|-++|++||.|||+++||+||||.+|+|+|.+|||||
T Consensus       232 ~LKYsFQt~drlCFVMeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKi  309 (516)
T KOG0690|consen  232 SLKYSFQTQDRLCFVMEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKI  309 (516)
T ss_pred             HhhhhhccCceEEEEEEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEe
Confidence            999999999999999999999999876655  345999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|+.-.                                                        ..+....+|||||.
T Consensus       310 tDFGLCKE~I--------------------------------------------------------~~g~t~kTFCGTPE  333 (516)
T KOG0690|consen  310 TDFGLCKEEI--------------------------------------------------------KYGDTTKTFCGTPE  333 (516)
T ss_pred             eecccchhcc--------------------------------------------------------cccceeccccCChh
Confidence            9999987532                                                        12346788999999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCC-
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIG-  327 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s-  327 (426)
                      |+|||++....|+.++|||.+||++|||++|+.||...+....+..|+.....++ ..+++++.|+..+|.+||.+|+. 
T Consensus       334 YLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGg  413 (516)
T KOG0690|consen  334 YLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGG  413 (516)
T ss_pred             hcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCC
Confidence            9999999999999999999999999999999999999999999998876554443 45889999999999999999996 


Q ss_pred             ----hHHHhcCCCcCCCChhhhhhccCCCCCCCCC
Q 014344          328 ----VEEIKGHEFFKGVNWELLLKISRPPNIPARF  358 (426)
Q Consensus       328 ----~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~  358 (426)
                          +.||..|+||.+++|+.+.....+|+..+..
T Consensus       414 GpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqV  448 (516)
T KOG0690|consen  414 GPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQV  448 (516)
T ss_pred             CchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCc
Confidence                8999999999999999987755554444343

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-55  Score=429.54  Aligned_cols=262  Identities=34%  Similarity=0.529  Sum_probs=232.1

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcce
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPR   90 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~   90 (426)
                      ....+.|++.+.||+|+||+|++|++..+++.||+|++.+.......        ....+.+.+|+.+++.+. ||||++
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~--------~~~~~~i~rEi~~~~~~~~HpnI~~   84 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS--------QKLDELIKREISILRRLRSHPNIIR   84 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc--------cccchhhHHHHHHHHHhccCCCEeE
Confidence            35677899999999999999999999999999999988776332111        123345668999999999 999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-CcEEE
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-GHIML  169 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-g~ikL  169 (426)
                      +++++.+...+|+|||||.||+|++++..  .+++.+..++.+++||+.|++|||++||+||||||||||++.+ +++||
T Consensus        85 l~ev~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl  162 (370)
T KOG0583|consen   85 LLEVFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKL  162 (370)
T ss_pred             EEEEEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEE
Confidence            99999999999999999999999999887  3459999999999999999999999999999999999999999 99999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++....                                                        .......++||||.
T Consensus       163 ~DFG~s~~~~--------------------------------------------------------~~~~~l~t~cGsp~  186 (370)
T KOG0583|consen  163 SDFGLSAISP--------------------------------------------------------GEDGLLKTFCGSPA  186 (370)
T ss_pred             eccccccccC--------------------------------------------------------CCCCcccCCCCCcc
Confidence            9999998652                                                        01235667899999


Q ss_pred             CccchhhcCCC-C-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHhccCCCCC
Q 014344          250 YVAPEIIEGKG-H-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE--PTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       250 y~aPE~~~~~~-~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~li~~~L~~dP~~R  325 (426)
                      |+|||++.+.. | +.++||||+||+||.|++|+.||...+...++..|......++..  +.++++||.+||..||.+|
T Consensus       187 Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R  266 (370)
T KOG0583|consen  187 YAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTR  266 (370)
T ss_pred             cCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccC
Confidence            99999999988 8 489999999999999999999999999999999988766555544  8999999999999999999


Q ss_pred             CChHHHhcCCCcCC
Q 014344          326 IGVEEIKGHEFFKG  339 (426)
Q Consensus       326 ~s~~eil~hp~f~~  339 (426)
                      +|+.+|+.||||+.
T Consensus       267 ~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  267 ITLLEILEHPWFQK  280 (370)
T ss_pred             CCHHHHhhChhhcc
Confidence            99999999999985

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8e-56  Score=432.32  Aligned_cols=264  Identities=26%  Similarity=0.454  Sum_probs=233.5

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ++-|++++.||.|+-|.|-+|++..||+..|||++.+..          .........+.+|+-||+.+.|||+++++++
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~----------~~s~s~~~~IerEIviMkLi~HpnVl~LydV   80 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRS----------ELSSSQPAGIEREIVIMKLIEHPNVLRLYDV   80 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeecccc----------ccccccccchhhhhHHHHHhcCCCeeeeeee
Confidence            345999999999999999999999999999999996653          1222345678899999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +++.+.+|+|+||++||.|++++...+  ++++.++.++++||+.|+.|||..+|+||||||+|+||+..+.|||+|||+
T Consensus        81 we~~~~lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGM  158 (786)
T KOG0588|consen   81 WENKQHLYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGM  158 (786)
T ss_pred             eccCceEEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccce
Confidence            999999999999999999999987654  499999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      |....++                                                         ....+.||+|.|.|||
T Consensus       159 AsLe~~g---------------------------------------------------------klLeTSCGSPHYA~PE  181 (786)
T KOG0588|consen  159 ASLEVPG---------------------------------------------------------KLLETSCGSPHYAAPE  181 (786)
T ss_pred             eecccCC---------------------------------------------------------ccccccCCCcccCCch
Confidence            9765322                                                         2344568999999999


Q ss_pred             hhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          255 IIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       255 ~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      ++.|.+| +.++||||+|||||.||+|+.||++.+....+.++.......+ ..++++.+||++||..||++|+|.+||+
T Consensus       182 IV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~  261 (786)
T KOG0588|consen  182 IVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEIL  261 (786)
T ss_pred             hhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHh
Confidence            9999998 6899999999999999999999999999988888876554433 4589999999999999999999999999


Q ss_pred             cCCCcCCCChhhhhh
Q 014344          333 GHEFFKGVNWELLLK  347 (426)
Q Consensus       333 ~hp~f~~~~~~~~~~  347 (426)
                      +|||+.+..-....+
T Consensus       262 kHP~l~g~~~~~~~~  276 (786)
T KOG0588|consen  262 KHPFLSGYTSLPSSK  276 (786)
T ss_pred             hCchhhcCCCCChhh
Confidence            999999876544443

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=5.2e-54  Score=416.72  Aligned_cols=281  Identities=33%  Similarity=0.630  Sum_probs=242.6

Q ss_pred             cCCCCCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc
Q 014344            4 VVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV   83 (426)
Q Consensus         4 ~~~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l   83 (426)
                      ++.......+.+++|++.+.||+|+||.||+|++..+++.||+|++.+......          .....+..|+.+|+.+
T Consensus         6 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~~l~~l   75 (329)
T PTZ00263          6 MFTKPDTSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKM----------KQVQHVAQEKSILMEL   75 (329)
T ss_pred             eeeccccCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hhHHHHHHHHHHHHhC
Confidence            444555677889999999999999999999999999999999999976543221          2346788899999999


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      +||||+++++++..++.+|+|||||.|++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus        76 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~  153 (329)
T PTZ00263         76 SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDN  153 (329)
T ss_pred             CCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECC
Confidence            9999999999999999999999999999999988754  34899999999999999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      +|.+||+|||++.....                                                           ...+
T Consensus       154 ~~~~kl~Dfg~~~~~~~-----------------------------------------------------------~~~~  174 (329)
T PTZ00263        154 KGHVKVTDFGFAKKVPD-----------------------------------------------------------RTFT  174 (329)
T ss_pred             CCCEEEeeccCceEcCC-----------------------------------------------------------Ccce
Confidence            99999999999875421                                                           1123


Q ss_pred             cccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCC
Q 014344          244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP  322 (426)
                      .+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.......+ ..+..+++||.+||+.||
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP  254 (329)
T PTZ00263        175 LCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDH  254 (329)
T ss_pred             ecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCH
Confidence            4699999999999999999999999999999999999999999888888877765544333 357789999999999999


Q ss_pred             CCCCC-----hHHHhcCCCcCCCChhhhhhccCCCCCC
Q 014344          323 TKRIG-----VEEIKGHEFFKGVNWELLLKISRPPNIP  355 (426)
Q Consensus       323 ~~R~s-----~~eil~hp~f~~~~~~~~~~~~~~~~~~  355 (426)
                      .+|++     +++|+.||||++.+|+.+.....++..+
T Consensus       255 ~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~~~~~~~~~  292 (329)
T PTZ00263        255 TKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIP  292 (329)
T ss_pred             HHcCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCcC
Confidence            99997     7999999999999999887644444333

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.5e-56  Score=396.22  Aligned_cols=263  Identities=28%  Similarity=0.410  Sum_probs=226.2

Q ss_pred             CCCCCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344            5 VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus         5 ~~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      +...++....+.+|+|+++||+|+||.||+|.+..+|..+|.|.+.-..+..           ...+.+..|+.+|++|+
T Consensus         8 ~~~~~~~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~-----------k~rq~~v~Ei~lLkQL~   76 (375)
T KOG0591|consen    8 MMDFSPPQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDA-----------KARQDCVKEISLLKQLN   76 (375)
T ss_pred             ccCCCCCcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccH-----------HHHHHHHHHHHHHHhcC
Confidence            4445556677889999999999999999999999999999999986544333           24567888999999999


Q ss_pred             CCCcceeee-eeecC-CeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH--CC--CcccCCCC
Q 014344           85 HPLLPRLRG-VLSTD-KFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHN--MG--IVYRDLKP  156 (426)
Q Consensus        85 hp~iv~l~~-~~~~~-~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~--~g--iiHrDlKp  156 (426)
                      |||||++++ .|..+ +.++||||||.+|||..+++..  ..+.+++..++.|+.|++.||..+|+  ..  |+||||||
T Consensus        77 HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKP  156 (375)
T KOG0591|consen   77 HPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKP  156 (375)
T ss_pred             CchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcc
Confidence            999999998 45444 4599999999999999988743  35679999999999999999999999  44  99999999


Q ss_pred             CCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          157 ENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD  236 (426)
Q Consensus       157 ~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (426)
                      .||+|+.+|.+||+||||++.+...                                                       
T Consensus       157 aNIFl~~~gvvKLGDfGL~r~l~s~-------------------------------------------------------  181 (375)
T KOG0591|consen  157 ANIFLTANGVVKLGDFGLGRFLSSK-------------------------------------------------------  181 (375)
T ss_pred             hheEEcCCCceeeccchhHhHhcch-------------------------------------------------------
Confidence            9999999999999999999987532                                                       


Q ss_pred             CCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CC--CCCHHHHHH
Q 014344          237 SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LV--GEPTPLRNL  313 (426)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~--~~~~~~~~l  313 (426)
                       ...+.++||||.||+||++.+.+|++++||||+||++|||+.-++||.+.+-.+...+|...... ++  ..+..+..|
T Consensus       182 -~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~l  260 (375)
T KOG0591|consen  182 -TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLREL  260 (375)
T ss_pred             -hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHH
Confidence             23466889999999999999999999999999999999999999999999988888888765332 33  347889999


Q ss_pred             HHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          314 IRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      |..|+..||..||+.     +|++.+
T Consensus       261 i~~ci~vd~~~RP~t-----~~~v~d  281 (375)
T KOG0591|consen  261 INMCIAVDPEQRPDT-----VPYVQD  281 (375)
T ss_pred             HHHHccCCcccCCCc-----chHHHH
Confidence            999999999999986     555543

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=3.1e-55  Score=420.61  Aligned_cols=255  Identities=31%  Similarity=0.518  Sum_probs=230.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|.+.+.||+|+||.||+++.+.+.+.||||.+.|..-           +....+.+.+|++|++.|+||||+.++++
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-----------~~k~l~~l~~ev~i~r~lkHpniv~m~es   69 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-----------NEKELKNLRQEVRILRSLKHPNIVEMLES   69 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-----------chHHHHHHHHHHHHHHhcCCcchhhHHHh
Confidence            4679999999999999999999999999999999966432           22356789999999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      |++...+|+|+|||.| +|+.++....  .++++.++.++.|++.||.|||+++|.|||+||.|||+...|++|++|||+
T Consensus        70 fEt~~~~~vVte~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~  146 (808)
T KOG0597|consen   70 FETSAHLWVVTEYAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGL  146 (808)
T ss_pred             hcccceEEEEehhhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhh
Confidence            9999999999999986 9999988654  499999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      |+.+..+.                                                        ...++.-|||.|||||
T Consensus       147 Ar~m~~~t--------------------------------------------------------~vltsikGtPlYmAPE  170 (808)
T KOG0597|consen  147 ARAMSTNT--------------------------------------------------------SVLTSIKGTPLYMAPE  170 (808)
T ss_pred             hhhcccCc--------------------------------------------------------eeeeeccCcccccCHH
Confidence            99875422                                                        1233456999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ++.+..|+..+|+||||||+|||.+|++||...+..+....|+..+..++ ..++.+.+||+.+|.+||.+|+|..+++.
T Consensus       171 lv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  171 LVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            99999999999999999999999999999999999999999998876554 45788999999999999999999999999


Q ss_pred             CCCcCC
Q 014344          334 HEFFKG  339 (426)
Q Consensus       334 hp~f~~  339 (426)
                      |||+++
T Consensus       251 HpF~k~  256 (808)
T KOG0597|consen  251 HPFWKG  256 (808)
T ss_pred             ChHHhh
Confidence            999876

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-53  Score=399.02  Aligned_cols=268  Identities=26%  Similarity=0.430  Sum_probs=235.5

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...++..+|++..+||.|..++||+|+...+++.||||+++.+..            ...++.+.+|+..|+.++||||+
T Consensus        20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc------------~~~ld~l~kE~~~msl~~HPNIv   87 (516)
T KOG0582|consen   20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC------------NNDLDALRKEVQTMSLIDHPNIV   87 (516)
T ss_pred             cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh------------hhhHHHHHHHHHHhhhcCCCCcc
Confidence            567889999999999999999999999999999999999965532            22367899999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      .++..|..+..+|+||.||.+|++.++++......++|..+..++++++.||.|||++|.||||||+.||||+.+|.|||
T Consensus        88 ~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkL  167 (516)
T KOG0582|consen   88 TYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKL  167 (516)
T ss_pred             eEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEE
Confidence            99999999999999999999999999998877677999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||.+..+.....                                                    ....+.++++|||+
T Consensus       168 adFgvsa~l~~~G~----------------------------------------------------R~~~rf~tfvgtp~  195 (516)
T KOG0582|consen  168 ADFGVSASLFDSGD----------------------------------------------------RQVTRFNTFVGTPC  195 (516)
T ss_pred             cCceeeeeecccCc----------------------------------------------------eeeEeeccccCccc
Confidence            99999887643210                                                    00112278899999


Q ss_pred             CccchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-----------CCCHHHHHHHHH
Q 014344          250 YVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-----------GEPTPLRNLIRR  316 (426)
Q Consensus       250 y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~~li~~  316 (426)
                      |||||++..  .+|++++||||||++..||.+|..||....+.+.+...++..+..+           ..+..++.+|..
T Consensus       196 wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~  275 (516)
T KOG0582|consen  196 WMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIAL  275 (516)
T ss_pred             ccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHH
Confidence            999999543  6799999999999999999999999999999888887776655422           124468899999


Q ss_pred             HhccCCCCCCChHHHhcCCCcCCCC
Q 014344          317 LLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                      ||++||++|||++++|+|+||+...
T Consensus       276 CL~kDP~kRptAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  276 CLVKDPSKRPTASKLLKHAFFKKAK  300 (516)
T ss_pred             HhhcCcccCCCHHHHhccHHHhhcc
Confidence            9999999999999999999998654

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-54  Score=407.27  Aligned_cols=274  Identities=28%  Similarity=0.518  Sum_probs=229.0

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhccc-CCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTN-NDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~-~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ...+++|++++.||+|.||+|-+|++..+++.||||++.|....+..-.... .......+.+.+|+.||++|.|||||+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            3567899999999999999999999999999999999988765543221111 111122468999999999999999999


Q ss_pred             eeeeeec--CCeEEEEEeccCCCChHHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           91 LRGVLST--DKFVGYAIDYCPGRDLHSLRKQQSEQM-FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        91 l~~~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~-l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |+++..+  .+.+|||+|||..|.+...   ...++ +++.++|.|+++++.||+|||.+|||||||||.|+||+++|+|
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~V  249 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTV  249 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcE
Confidence            9999965  4689999999999988643   23344 9999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||.+.....+...                                                   .........+||
T Consensus       250 KIsDFGVs~~~~~~~~~---------------------------------------------------~~d~~L~~tvGT  278 (576)
T KOG0585|consen  250 KISDFGVSNEFPQGSDE---------------------------------------------------GSDDQLSRTVGT  278 (576)
T ss_pred             EeeccceeeecccCCcc---------------------------------------------------ccHHHHhhcCCC
Confidence            99999999876433111                                                   111112225799


Q ss_pred             CCCccchhhcCCC---C-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCC---CHHHHHHHHHHhcc
Q 014344          248 EEYVAPEIIEGKG---H-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE---PTPLRNLIRRLLEK  320 (426)
Q Consensus       248 ~~y~aPE~~~~~~---~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~---~~~~~~li~~~L~~  320 (426)
                      |.|+|||++.+..   + +++.||||+||+||.|+.|+.||.+....+++.+|+..+..++..   ...++|||.+||++
T Consensus       279 PAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~K  358 (576)
T KOG0585|consen  279 PAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEK  358 (576)
T ss_pred             ccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhc
Confidence            9999999988732   2 689999999999999999999999999999999999888766654   67899999999999


Q ss_pred             CCCCCCChHHHhcCCCcCC
Q 014344          321 DPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       321 dP~~R~s~~eil~hp~f~~  339 (426)
                      ||++|+++.+|..|||...
T Consensus       359 dP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  359 DPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             Chhheeehhhheecceecc
Confidence            9999999999999999863

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-54  Score=376.74  Aligned_cols=267  Identities=30%  Similarity=0.509  Sum_probs=240.8

Q ss_pred             CCCCCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344            5 VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus         5 ~~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      +-++....+.+++|++++.||+|-||.||+|+.+.++-.||+||+.|+.+.+..          ....+.+|++|-+.|+
T Consensus        11 ~~~~~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~----------v~~qlrREiEIqs~L~   80 (281)
T KOG0580|consen   11 FGSRATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQ----------VEHQLRREIEIQSHLR   80 (281)
T ss_pred             cccccccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhc----------chhhhhheeEeecccC
Confidence            344556788999999999999999999999999999999999999888765531          2356788999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      ||||.+++++|.++..+|+++||..+|+|+..+..+..+.+++..+..|++|++.||.|+|..++|||||||+|+|++..
T Consensus        81 hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~  160 (281)
T KOG0580|consen   81 HPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSA  160 (281)
T ss_pred             CccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCC
Confidence            99999999999999999999999999999998887777789999999999999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      |.+||+|||.+..-.                                                          ..+..++
T Consensus       161 ~~lkiAdfGwsV~~p----------------------------------------------------------~~kR~tl  182 (281)
T KOG0580|consen  161 GELKIADFGWSVHAP----------------------------------------------------------SNKRKTL  182 (281)
T ss_pred             CCeeccCCCceeecC----------------------------------------------------------CCCceee
Confidence            999999999886532                                                          2356788


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCC
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~  323 (426)
                      |||..|.+||+..+..++..+|+|++|+++||++.|.+||...+..+++.+|....... ...+..++|||.+||.++|.
T Consensus       183 cgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~  262 (281)
T KOG0580|consen  183 CGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPI  262 (281)
T ss_pred             ecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhccCcc
Confidence            99999999999999999999999999999999999999999999999999997544333 34578899999999999999


Q ss_pred             CCCChHHHhcCCCcCC
Q 014344          324 KRIGVEEIKGHEFFKG  339 (426)
Q Consensus       324 ~R~s~~eil~hp~f~~  339 (426)
                      +|.+..|++.|||+..
T Consensus       263 ~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  263 ERLALTEVMDHPWIVA  278 (281)
T ss_pred             ccccHHHHhhhHHHHh
Confidence            9999999999999854

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-55  Score=412.49  Aligned_cols=257  Identities=29%  Similarity=0.486  Sum_probs=221.7

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      ...++|.++++||.|+||.||+|+.+.+++.||||.|++....-.           . -.-.+|+.-|++|+ ||||+++
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e-----------e-~~nLREvksL~kln~hpniikL   74 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE-----------E-CMNLREVKSLRKLNPHPNIIKL   74 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH-----------H-HHHHHHHHHHHhcCCCCcchhh
Confidence            345679999999999999999999999999999999966543211           1 12356999999999 9999999


Q ss_pred             eeeeecCC-eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           92 RGVLSTDK-FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        92 ~~~~~~~~-~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      .+++.+.+ .+|+|||||+ .+|+.+++.+ ++.|+++.++.|+.||+.||+|+|.+|+.||||||||||+.....|||+
T Consensus        75 ~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKia  152 (538)
T KOG0661|consen   75 KEVIRDNDRILYFVFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIA  152 (538)
T ss_pred             HHHhhccCceEeeeHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEec
Confidence            99998877 9999999996 8999999877 6789999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+.+....+                                                         -+.+|.|.+|
T Consensus       153 DFGLARev~SkpP---------------------------------------------------------YTeYVSTRWY  175 (538)
T KOG0661|consen  153 DFGLAREVRSKPP---------------------------------------------------------YTEYVSTRWY  175 (538)
T ss_pred             ccccccccccCCC---------------------------------------------------------cchhhhcccc
Confidence            9999998764332                                                         3456889999


Q ss_pred             ccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCC-------------------CC-----
Q 014344          251 VAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP-------------------PD-----  302 (426)
Q Consensus       251 ~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~~-------------------~~-----  302 (426)
                      +|||++.. ..|+.++||||+|||++|+.+-++.|.|.++.+++.+|.   ..|                   +.     
T Consensus       176 RAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~  255 (538)
T KOG0661|consen  176 RAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSP  255 (538)
T ss_pred             cchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCC
Confidence            99999765 568999999999999999999999999999998888773   111                   11     


Q ss_pred             ----CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          303 ----LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       303 ----~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                          ....+.++.+||.+||.+||.+||||.++|+||||+..
T Consensus       256 l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  256 LKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             hHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence                11235678899999999999999999999999999853

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-55  Score=384.85  Aligned_cols=256  Identities=27%  Similarity=0.479  Sum_probs=227.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      -+.|++..+||+|.|++|+.+.+..+|+.+|+|+++-..+...           ..+.+.+|++|.+.|+||||+++++.
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-----------~~e~l~rEarIC~~LqHP~IvrL~~t   78 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-----------DFQKLEREARICRKLQHPNIVRLHDS   78 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-----------cHHHHHHHHHHHHhcCCCcEeehhhh
Confidence            4569999999999999999999999999999999965544332           45678889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC---CcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN---GHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~---g~ikL~D  171 (426)
                      +..+...|+|+|++.|++|+.-+-.+  ..+++..+.++++||+.||.|+|.+||||||+||+|+|+.+.   .-+||+|
T Consensus        79 i~~~~~~ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~  156 (355)
T KOG0033|consen   79 IQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLAD  156 (355)
T ss_pred             hcccceeEEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecc
Confidence            99999999999999999998655443  348999999999999999999999999999999999999754   3699999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+..                                                         +.....++|||.||
T Consensus       157 FGvAi~l~~---------------------------------------------------------g~~~~G~~GtP~fm  179 (355)
T KOG0033|consen  157 FGLAIEVND---------------------------------------------------------GEAWHGFAGTPGYL  179 (355)
T ss_pred             cceEEEeCC---------------------------------------------------------ccccccccCCCccc
Confidence            999988752                                                         22345678999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||+++..+|+..+||||.||+||-|+.|++||.+.+....|.+|....     +.+...++.+++||++||..||.+|+
T Consensus       180 aPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRI  259 (355)
T KOG0033|consen  180 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRI  259 (355)
T ss_pred             CHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhc
Confidence            9999999999999999999999999999999999999999999997543     35556688999999999999999999


Q ss_pred             ChHHHhcCCCcCCC
Q 014344          327 GVEEIKGHEFFKGV  340 (426)
Q Consensus       327 s~~eil~hp~f~~~  340 (426)
                      |+.|+|+|||+.+-
T Consensus       260 ta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  260 TADEALKHPWICNR  273 (355)
T ss_pred             cHHHHhCCchhcch
Confidence            99999999999753

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-53  Score=402.62  Aligned_cols=267  Identities=38%  Similarity=0.664  Sum_probs=231.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|.+..+++.||+|++........          .....+.+|+.+|+.++||||+++++++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~iv~~~~~~   70 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRL----------KQEQHVHNEKRVLKEVSHPFIIRLFWTE   70 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhh----------HHHHHHHHHHHHHHhCCCCcHhhhHhhh
Confidence            469999999999999999999999999999999965432211          2345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .++..+|+||||+.|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++
T Consensus        71 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~  148 (291)
T cd05612          71 HDQRFLYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFA  148 (291)
T ss_pred             ccCCeEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcc
Confidence            9999999999999999999988754  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .....                                                           .....+||+.|+|||+
T Consensus       149 ~~~~~-----------------------------------------------------------~~~~~~gt~~y~aPE~  169 (291)
T cd05612         149 KKLRD-----------------------------------------------------------RTWTLCGTPEYLAPEV  169 (291)
T ss_pred             hhccC-----------------------------------------------------------CcccccCChhhcCHHH
Confidence            75421                                                           1123469999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCC-----hH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIG-----VE  329 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s-----~~  329 (426)
                      +.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......++ ..+..+++||++||+.||.+|++     ++
T Consensus       170 ~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~  249 (291)
T cd05612         170 IQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGAD  249 (291)
T ss_pred             HcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHH
Confidence            9999999999999999999999999999999988888877765544333 44778999999999999999995     99


Q ss_pred             HHhcCCCcCCCChhhhhhccCCCC
Q 014344          330 EIKGHEFFKGVNWELLLKISRPPN  353 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~~~~~~~~  353 (426)
                      +++.||||+.++|.........+.
T Consensus       250 ~~l~h~~~~~~~~~~~~~~~~~~~  273 (291)
T cd05612         250 DVKNHRWFKSVDWDDVPQRKLKPP  273 (291)
T ss_pred             HHhcCccccCCCHHHHhcCCCCCC
Confidence            999999999999998765443333

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-54  Score=405.11  Aligned_cols=281  Identities=33%  Similarity=0.549  Sum_probs=247.4

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      +.+..+.|+.-++||+|+||.||.++.+.||+.||+|.+.|.++.++..          ......|..||.+++.++||.
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~g----------e~maLnEk~iL~kV~s~FiVs  249 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKG----------ETMALNEKQILEKVSSPFIVS  249 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhh----------hHHhhHHHHHHHHhccCcEEE
Confidence            5677788999999999999999999999999999999999988877632          346777999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +-++|++++.+|+||..|+||||.-.+.+.+...|++..+++|++||+.||++||+.+||+|||||+|||+|+.|||+|+
T Consensus       250 laYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRIS  329 (591)
T KOG0986|consen  250 LAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRIS  329 (591)
T ss_pred             EeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEee
Confidence            99999999999999999999999988877776779999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |+|||..+..+.                                                         .....+||..|
T Consensus       330 DLGLAvei~~g~---------------------------------------------------------~~~~rvGT~GY  352 (591)
T KOG0986|consen  330 DLGLAVEIPEGK---------------------------------------------------------PIRGRVGTVGY  352 (591)
T ss_pred             ccceEEecCCCC---------------------------------------------------------ccccccCcccc
Confidence            999999875432                                                         12334899999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK----ETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R  325 (426)
                      ||||++.+..|++++|||||||++|||+.|+.||.....+    +.-.+++..+.... ..++++++|++.+|++||++|
T Consensus       353 MAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~R  432 (591)
T KOG0986|consen  353 MAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKR  432 (591)
T ss_pred             cCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHh
Confidence            9999999999999999999999999999999999865433    44556665554443 458899999999999999999


Q ss_pred             CC-----hHHHhcCCCcCCCChhhhhh-ccCCCCCCCCC
Q 014344          326 IG-----VEEIKGHEFFKGVNWELLLK-ISRPPNIPARF  358 (426)
Q Consensus       326 ~s-----~~eil~hp~f~~~~~~~~~~-~~~~~~~~~~~  358 (426)
                      +.     ++++.+||||++++|..+.. .-.||.+|++-
T Consensus       433 LGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~  471 (591)
T KOG0986|consen  433 LGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPG  471 (591)
T ss_pred             ccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCcc
Confidence            95     78999999999999998864 66788888763

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=3.5e-52  Score=409.35  Aligned_cols=299  Identities=28%  Similarity=0.505  Sum_probs=230.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.+......          .....+..|+.++..++||||+++++.+
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~il~~~~~~~iv~~~~~~   70 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEK----------EQVGHIRAERDILVEADSLWVVKMFYSF   70 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHh----------hHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            479999999999999999999999999999999976543221          2345778899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+...+|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++
T Consensus        71 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla  148 (363)
T cd05628          71 QDKLNLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLC  148 (363)
T ss_pred             ecCCeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCc
Confidence            9999999999999999999988764  45999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      +.+............       .    ..     .+...........     .................+||+.|+|||+
T Consensus       149 ~~~~~~~~~~~~~~~-------~----~~-----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~  207 (363)
T cd05628         149 TGLKKAHRTEFYRNL-------N----HS-----LPSDFTFQNMNSK-----RKAETWKRNRRQLAFSTVGTPDYIAPEV  207 (363)
T ss_pred             ccccccccccccccc-------c----cc-----ccccccccccccc-----cccchhhhccccccccccCCccccCHHH
Confidence            866432110000000       0    00     0000000000000     0000000001122346789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCC---CCCC
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPT---KRIG  327 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~---~R~s  327 (426)
                      +.+..++.++|||||||++|||++|+.||.+.+..+.+.++....     +.....+..+++||.+|+. +|.   .||+
T Consensus       208 ~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~  286 (363)
T cd05628         208 FMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG  286 (363)
T ss_pred             HcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC
Confidence            999999999999999999999999999999998888888776421     1122356789999999875 444   4579


Q ss_pred             hHHHhcCCCcCCCChhhhhhc
Q 014344          328 VEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       328 ~~eil~hp~f~~~~~~~~~~~  348 (426)
                      ++||++||||++++|+.+...
T Consensus       287 ~~ei~~hp~f~~~~~~~~~~~  307 (363)
T cd05628         287 VEEIKTNPFFEGVDWEHIRER  307 (363)
T ss_pred             HHHHhCCCCCCCCCHHHHHhC
Confidence            999999999999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.8e-52  Score=407.34  Aligned_cols=268  Identities=29%  Similarity=0.591  Sum_probs=232.8

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCC-ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESS-ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      ...+.+++|++++.||+|+||.||+|.+..++ ..||+|++.+......          .....+..|+.+++.++||||
T Consensus        24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~I   93 (340)
T PTZ00426         24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQ----------KQVDHVFSERKILNYINHPFC   93 (340)
T ss_pred             CCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhCCCCCC
Confidence            45678889999999999999999999976654 6899999976543221          234567889999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +++++++.+...+|+|||||.||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+|
T Consensus        94 v~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ik  171 (340)
T PTZ00426         94 VNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIK  171 (340)
T ss_pred             cceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEE
Confidence            99999999999999999999999999998764  3499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++..+..                                                           ...+.+||+
T Consensus       172 L~DFG~a~~~~~-----------------------------------------------------------~~~~~~gt~  192 (340)
T PTZ00426        172 MTDFGFAKVVDT-----------------------------------------------------------RTYTLCGTP  192 (340)
T ss_pred             EecCCCCeecCC-----------------------------------------------------------CcceecCCh
Confidence            999999875421                                                           112346999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC-
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI-  326 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~-  326 (426)
                      .|+|||++.+..++.++|||||||++|+|++|.+||.+.+....+..+....... ...+..+.++|++||+.||.+|+ 
T Consensus       193 ~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~  272 (340)
T PTZ00426        193 EYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYG  272 (340)
T ss_pred             hhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCC
Confidence            9999999999999999999999999999999999999988887777776554322 34478899999999999999996 


Q ss_pred             ----ChHHHhcCCCcCCCChhhhhhc
Q 014344          327 ----GVEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       327 ----s~~eil~hp~f~~~~~~~~~~~  348 (426)
                          +++++++||||++++|..+...
T Consensus       273 ~~~~~~~~~~~hp~f~~~~~~~~~~~  298 (340)
T PTZ00426        273 NLKKGAQNVKEHPWFGNIDWVSLLHK  298 (340)
T ss_pred             CCCCCHHHHHcCCCcCCCCHHHHHhC
Confidence                8999999999999999987653

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-52  Score=402.62  Aligned_cols=268  Identities=37%  Similarity=0.655  Sum_probs=231.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||||++.+......          .....+..|+.++..++||||+++++++
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~h~~iv~~~~~~   70 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKL----------NEVRHVLTERDILTTTKSEWLVKLLYAF   70 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            469999999999999999999999999999999976543221          2346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .....+|+|||||+|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        71 ~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a  148 (333)
T cd05600          71 QDDEYLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLS  148 (333)
T ss_pred             EcCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCC
Confidence            9999999999999999999998654  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .....                                                           .....+||+.|+|||+
T Consensus       149 ~~~~~-----------------------------------------------------------~~~~~~gt~~y~aPE~  169 (333)
T cd05600         149 KGIVT-----------------------------------------------------------YANSVVGSPDYMAPEV  169 (333)
T ss_pred             ccccc-----------------------------------------------------------ccCCcccCccccChhH
Confidence            75421                                                           1234569999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCC----CCCHHHHHHHHHHhccCCCCCC
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLV----GEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~----~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      +.+..++.++|||||||++|||++|..||.+.+..+.+..+....     +...    ..+..+.+||.+||..+|.+|+
T Consensus       170 ~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~  249 (333)
T cd05600         170 LRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFG  249 (333)
T ss_pred             hcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcC
Confidence            999999999999999999999999999999988877766654211     1111    3478899999999999999999


Q ss_pred             ChHHHhcCCCcCCCChhhhhhccCCCCCC
Q 014344          327 GVEEIKGHEFFKGVNWELLLKISRPPNIP  355 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~~~~~~~~~~~~  355 (426)
                      +++++++||||++++|..+. ...|+..|
T Consensus       250 s~~~ll~h~~~~~~~~~~~~-~~~~~~~~  277 (333)
T cd05600         250 SLEDIKNHPFFKEVDWNELR-ELKPPFVP  277 (333)
T ss_pred             CHHHHHhCcccCCCCHHHHh-hCCCCCCC
Confidence            99999999999999998876 33444444

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.3e-54  Score=398.41  Aligned_cols=257  Identities=29%  Similarity=0.505  Sum_probs=234.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++.++||+|.||+|-+|.+...|+.||||.+.++.+..+          +.+-.+.+|++||+.|+||||+.+|++|
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkde----------qDlvhIRREIeIMSsLNHPhII~IyEVF  122 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDE----------QDLVHIRREIEIMSSLNHPHIIQIYEVF  122 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccH----------HHHHHHHHHHHHHhhcCCCceeehhhhh
Confidence            479999999999999999999999999999999988776544          4567899999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ++.+.+.|||||..||+|++|+....  .+++.+++++++||+.|+.|||.++++|||||.+|||+|.++++||+|||++
T Consensus       123 ENkdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLS  200 (668)
T KOG0611|consen  123 ENKDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLS  200 (668)
T ss_pred             cCCceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchh
Confidence            99999999999999999999988754  4999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+..                                                         ....++|||+|.|.+||+
T Consensus       201 Nly~~---------------------------------------------------------~kfLqTFCGSPLYASPEI  223 (668)
T KOG0611|consen  201 NLYAD---------------------------------------------------------KKFLQTFCGSPLYASPEI  223 (668)
T ss_pred             hhhcc---------------------------------------------------------ccHHHHhcCCcccCCccc
Confidence            87642                                                         234678899999999999


Q ss_pred             hcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          256 IEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       256 ~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +.|.+| +..+|.|||||+||.|++|..||+|.+......+|......-+..|..+.-||+.||..||++|.|+++|-.|
T Consensus       224 vNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  224 VNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             cCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence            999998 6899999999999999999999999999999999876665555667888999999999999999999999999


Q ss_pred             CCcCCCChhh
Q 014344          335 EFFKGVNWEL  344 (426)
Q Consensus       335 p~f~~~~~~~  344 (426)
                      =|.   +|.-
T Consensus       304 WWv---Nwgy  310 (668)
T KOG0611|consen  304 WWV---NWGY  310 (668)
T ss_pred             hee---eccc
Confidence            775   4653

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.9e-52  Score=404.79  Aligned_cols=261  Identities=36%  Similarity=0.659  Sum_probs=225.7

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      +.||+|+||.||+|++..+|+.||||++.+......          .....+..|+.+|+.++||||+++++++...+.+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~   70 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAK----------DEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRL   70 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------HHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEE
Confidence            469999999999999999999999999976543221          2345677899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK  181 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~  181 (426)
                      |+||||++|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        71 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~  148 (323)
T cd05571          71 CFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD  148 (323)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC
Confidence            9999999999999887654  45899999999999999999999999999999999999999999999999998643210


Q ss_pred             CCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCC
Q 014344          182 TPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH  261 (426)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  261 (426)
                                                                              .......+||+.|+|||++.+..+
T Consensus       149 --------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~  172 (323)
T cd05571         149 --------------------------------------------------------GATMKTFCGTPEYLAPEVLEDNDY  172 (323)
T ss_pred             --------------------------------------------------------CCcccceecCccccChhhhcCCCC
Confidence                                                                    112234579999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC-----ChHHHhcCC
Q 014344          262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHE  335 (426)
Q Consensus       262 ~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~-----s~~eil~hp  335 (426)
                      +.++|||||||++|||++|+.||...+....+..+....... ...+..+.+||.+||..||++||     ++.+|++||
T Consensus       173 ~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~  252 (323)
T cd05571         173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR  252 (323)
T ss_pred             CccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence            999999999999999999999999888877777766544333 34578899999999999999999     899999999


Q ss_pred             CcCCCChhhhhhccC
Q 014344          336 FFKGVNWELLLKISR  350 (426)
Q Consensus       336 ~f~~~~~~~~~~~~~  350 (426)
                      ||++++|..+.....
T Consensus       253 ~f~~~~~~~~~~~~~  267 (323)
T cd05571         253 FFASINWQDVVQKKL  267 (323)
T ss_pred             CcCCCCHHHHHhCCC
Confidence            999999998875433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=6.1e-53  Score=372.10  Aligned_cols=255  Identities=26%  Similarity=0.447  Sum_probs=219.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|..+++||+|.||+||+|++..||+.||||.+.....           .........+|+++|+.++|+||+.+.++|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-----------kdGi~~talREIK~Lqel~h~nIi~LiD~F   70 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-----------KDGINRTALREIKLLQELKHPNIIELIDVF   70 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-----------ccCccHHHHHHHHHHHHccCcchhhhhhhc
Confidence            469999999999999999999999999999999954421           112345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ...+.+.+|+||++ .||...++... ..++...++.|+.+++.||+|||++.|+||||||.|+|++++|.+||+|||++
T Consensus        71 ~~~~~l~lVfEfm~-tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLA  148 (318)
T KOG0659|consen   71 PHKSNLSLVFEFMP-TDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLA  148 (318)
T ss_pred             cCCCceEEEEEecc-ccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccch
Confidence            99999999999997 89998887654 56999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      +.+.+..                                                        +.....|-|.+|+|||+
T Consensus       149 r~f~~p~--------------------------------------------------------~~~~~~V~TRWYRAPEL  172 (318)
T KOG0659|consen  149 RFFGSPN--------------------------------------------------------RIQTHQVVTRWYRAPEL  172 (318)
T ss_pred             hccCCCC--------------------------------------------------------cccccceeeeeccChHH
Confidence            9875432                                                        12223378999999999


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC---------------------C-----CCCC
Q 014344          256 IEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP---------------------P-----DLVG  305 (426)
Q Consensus       256 ~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~---------------------~-----~~~~  305 (426)
                      +.| ..|+..+|+||+|||+.||+.|.+-|.|.++-+++..|+.   .|                     .     -+..
T Consensus       173 LfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~a  252 (318)
T KOG0659|consen  173 LFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPA  252 (318)
T ss_pred             hccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccccccc
Confidence            887 5699999999999999999999999999999888776641   11                     0     0112


Q ss_pred             CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       306 ~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      .+.++.||+.+||.+||.+|+|+.|+|+|+||+.
T Consensus       253 as~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~  286 (318)
T KOG0659|consen  253 ASSDALDLLSKMLTYNPKKRITASQALKHPYFKS  286 (318)
T ss_pred             ccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence            3566889999999999999999999999999974

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-53  Score=410.43  Aligned_cols=252  Identities=25%  Similarity=0.426  Sum_probs=226.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ...|....+||+|+.|.||.|+...+++.||||.+......             ..+-+.+|+.+|+.+.|+|||.+++.
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~-------------~keLilnEi~Vm~~~~H~NiVnfl~S  338 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP-------------KKELLLNEILVMRDLHHPNIVNFLDS  338 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC-------------chhhhHHHHHHHHhccchHHHHHHHH
Confidence            45688999999999999999999999999999999665433             33567889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      |-.++.+|.||||++||+|.+.+....   ++|.++..++++++.||+|||.+||||||||.+|||++.+|.+||+|||+
T Consensus       339 ylv~deLWVVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGF  415 (550)
T KOG0578|consen  339 YLVGDELWVVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGF  415 (550)
T ss_pred             hcccceeEEEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeee
Confidence            999999999999999999999877543   99999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      |..+....                                                        .+..+++|||.|||||
T Consensus       416 caqi~~~~--------------------------------------------------------~KR~TmVGTPYWMAPE  439 (550)
T KOG0578|consen  416 CAQISEEQ--------------------------------------------------------SKRSTMVGTPYWMAPE  439 (550)
T ss_pred             eecccccc--------------------------------------------------------CccccccCCCCccchh
Confidence            99875322                                                        2566889999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      ++....|++++||||||++++||+-|.+||-..++...++.|......    ....++.++|||.+||+.|+.+|++|.|
T Consensus       440 Vvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~e  519 (550)
T KOG0578|consen  440 VVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKE  519 (550)
T ss_pred             hhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHH
Confidence            999999999999999999999999999999998888888888644322    2245789999999999999999999999


Q ss_pred             HhcCCCcC
Q 014344          331 IKGHEFFK  338 (426)
Q Consensus       331 il~hp~f~  338 (426)
                      ||.||||+
T Consensus       520 LL~HpFl~  527 (550)
T KOG0578|consen  520 LLEHPFLK  527 (550)
T ss_pred             HhcChhhh
Confidence            99999995

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-52  Score=406.57  Aligned_cols=316  Identities=31%  Similarity=0.516  Sum_probs=242.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      .+-+-|..++.||-|+||.|.||+...|...||+|.+.|..+-.+          .+...+..|..||...+.++||+||
T Consensus       626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~r----------nQvaHVKAERDILAEADn~WVVrLy  695 (1034)
T KOG0608|consen  626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMR----------NQVAHVKAERDILAEADNEWVVRLY  695 (1034)
T ss_pred             ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhh----------hhhhhhhhhhhhHhhcCCcceEEEE
Confidence            344558999999999999999999999999999999987766554          2456778899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ..|++++++|+||+|++|||+.+|+-+.  +.|.|+.+|+|++++.+|+++.|..|+|||||||+|||||.+|||||+||
T Consensus       696 ySFQDkdnLYFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDF  773 (1034)
T KOG0608|consen  696 YSFQDKDNLYFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDF  773 (1034)
T ss_pred             EEeccCCceEEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeec
Confidence            9999999999999999999999987664  45999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |||+.+.=...       ..++.+..+....|.-....-..++   .+...    ....+..........+.|||+.|+|
T Consensus       774 GLCTGfRWTHd-------skYYq~gdH~RqDSmep~~e~~d~~---~~lkv----L~~ra~~~h~r~~ahslvgt~nyia  839 (1034)
T KOG0608|consen  774 GLCTGFRWTHD-------SKYYQEGDHHRQDSMEPSPEWADIS---KCLKV----LERRAMRQHQRILAHSLVGTPNYIA  839 (1034)
T ss_pred             cccccceeccc-------cccccCCCccccccCCCchhhcccc---ccchH----HHHHHHhhhhhhhhhhhcCCCcccC
Confidence            99998742110       0111111111111110000000000   00000    0000000111234567899999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----CCCCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-----RPPDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++...+|+..+||||.|||||||+.|++||-..+..++.+++..     ..+.....+.++.+||+++. .+++.|+.
T Consensus       840 pevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLG  918 (1034)
T KOG0608|consen  840 PEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLG  918 (1034)
T ss_pred             hHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhc
Confidence            9999999999999999999999999999999998888777665542     22333456888999999875 67889985


Q ss_pred             ---hHHHhcCCCcCCCChhhhhhccCCCCCCC
Q 014344          328 ---VEEIKGHEFFKGVNWELLLKISRPPNIPA  356 (426)
Q Consensus       328 ---~~eil~hp~f~~~~~~~~~~~~~~~~~~~  356 (426)
                         ++++..||||+++||..+.+ .+.+++|.
T Consensus       919 kng~d~vKaHpfFkgIDfsslRk-q~ApYIP~  949 (1034)
T KOG0608|consen  919 KNGADQVKAHPFFKGIDFSSLRK-QRAPYIPR  949 (1034)
T ss_pred             ccchhhhhcCccccccchHhhhh-ccCCcCcc
Confidence               78899999999999999544 45567764

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.8e-51  Score=406.81  Aligned_cols=319  Identities=29%  Similarity=0.465  Sum_probs=232.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|++++.||+|+||+||+|++..+++.||||++.+......          .....+..|+.+|+.++||||+++++++
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~----------~~~~~~~~E~~il~~l~h~~iv~l~~~~   70 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNR----------NQVAHVKAERDILAEADNEWVVKLYYSF   70 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------HHHHHHHHHHHHHHhcCCCCeeeeEEEE
Confidence            369999999999999999999999999999999976543222          2456788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+...+|+|||||+||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++
T Consensus        71 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~  148 (381)
T cd05626          71 QDKDNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLC  148 (381)
T ss_pred             ecCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCC
Confidence            9999999999999999999988754  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+...............................|..+...         .................+.+||+.|+|||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~  219 (381)
T cd05626         149 TGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRL---------KTLEQRATKQHQRCLAHSLVGTPNYIAPEV  219 (381)
T ss_pred             cccccccccccccccccccccccCccccccccccccccccc---------chhhccccccccccccccccCCccccCHHH
Confidence            75532110000000000000000000000000000000000         000000000011123356789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCHHHHHHHHHHhcc--CCCCCCCh
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGEPTPLRNLIRRLLEK--DPTKRIGV  328 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~li~~~L~~--dP~~R~s~  328 (426)
                      +.+..++.++|||||||++|||++|..||...+..+....+...     .+.....++++.+||.+||..  +|..|+++
T Consensus       220 ~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~  299 (381)
T cd05626         220 LLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA  299 (381)
T ss_pred             HcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence            99999999999999999999999999999988877666665421     122224578899999996654  55559999


Q ss_pred             HHHhcCCCcCCCChhhhhhccCCCCCC
Q 014344          329 EEIKGHEFFKGVNWELLLKISRPPNIP  355 (426)
Q Consensus       329 ~eil~hp~f~~~~~~~~~~~~~~~~~~  355 (426)
                      +++++||||++++|........+|..|
T Consensus       300 ~~~l~hp~f~~~~~~~~~~~~~~~~~p  326 (381)
T cd05626         300 DDIKAHPFFSEVDFSSDIRTQPAPYVP  326 (381)
T ss_pred             HHHhcCcccCCCChhHHhhcCCCCccC
Confidence            999999999999998866544445444

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2.6e-51  Score=405.96  Aligned_cols=317  Identities=31%  Similarity=0.526  Sum_probs=234.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|++++.||+|+||+||+|++..+++.||+|++.+......          .....+..|+.+++.++||||++++++|
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~----------~~~~~~~~E~~il~~~~h~~iv~~~~~~   70 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLR----------NQVAHVKAERDILAEADNEWVVRLYYSF   70 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhH----------HHHHHHHHHHHHHHhCCCCcCCeEEEEE
Confidence            369999999999999999999999999999999976543221          2456788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .++..+|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++
T Consensus        71 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla  148 (382)
T cd05625          71 QDKDNLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC  148 (382)
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCC
Confidence            9999999999999999999988654  35899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccc--cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRS--FLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ..+...........  .............  .....|..+         ....................+.+||+.|+||
T Consensus       149 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP  217 (382)
T cd05625         149 TGFRWTHDSKYYQS--GDHVRQDSMDFSNEWGDPANCRCG---------DRLKPLERRAARQHQRCLAHSLVGTPNYIAP  217 (382)
T ss_pred             cccccccccccccc--cccccccccccccccccccccccc---------ccccchhhhhccccccccccccccCcccCCH
Confidence            75532110000000  0000000000000  000000000         0000000000000111233467899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCCCC-
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIG-  327 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~s-  327 (426)
                      |++.+..++.++|||||||++|||++|++||.+.+..+....+....     +.....++.+.+||.+|+ .+|.+|++ 
T Consensus       218 E~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~  296 (382)
T cd05625         218 EVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGK  296 (382)
T ss_pred             HHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCC
Confidence            99999999999999999999999999999999988877776665321     222345788999999986 59999997 


Q ss_pred             --hHHHhcCCCcCCCChhhhhhccCCCCCCC
Q 014344          328 --VEEIKGHEFFKGVNWELLLKISRPPNIPA  356 (426)
Q Consensus       328 --~~eil~hp~f~~~~~~~~~~~~~~~~~~~  356 (426)
                        +++++.||||++++|........+|..|.
T Consensus       297 ~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~  327 (382)
T cd05625         297 NGADEIKAHPFFKTIDFSSDLRQQSAPYIPK  327 (382)
T ss_pred             CCHHHHhcCCCcCCcChHHHHhcCCCCccCc
Confidence              99999999999999987655444454443

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-52  Score=393.64  Aligned_cols=258  Identities=30%  Similarity=0.474  Sum_probs=216.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ..+|..++.||+|+||+||++.+..+|+.+|+|.+....             ....+.+.+|+.+|++|+|||||++++.
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~-------------~~~~~~l~~Ei~iL~~l~~p~IV~~~G~   82 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED-------------SPTSESLEREIRILSRLNHPNIVQYYGS   82 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeeccc-------------chhHHHHHHHHHHHHhCCCCCEEeeCCc
Confidence            566999999999999999999999999999999985431             1115678889999999999999999997


Q ss_pred             eecCC--eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-CCcEEEec
Q 014344           95 LSTDK--FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-NGHIMLVD  171 (426)
Q Consensus        95 ~~~~~--~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-~g~ikL~D  171 (426)
                      .....  .+++.|||++||+|.+++...++ .+++..++.|++||+.||+|||++|||||||||+|||++. +|.+||+|
T Consensus        83 ~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaD  161 (313)
T KOG0198|consen   83 SSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLAD  161 (313)
T ss_pred             cccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEecc
Confidence            54443  79999999999999999988776 6999999999999999999999999999999999999999 79999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                     .......++.|||.||
T Consensus       162 FG~a~~~~~~~-----------------------------------------------------~~~~~~~~~~Gtp~~m  188 (313)
T KOG0198|consen  162 FGLAKKLESKG-----------------------------------------------------TKSDSELSVQGTPNYM  188 (313)
T ss_pred             Ccccccccccc-----------------------------------------------------ccccccccccCCcccc
Confidence            99998764200                                                     0112334567999999


Q ss_pred             cchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRG-SSRKETFYRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~-~~~~~~~~~i~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.. .....++|||||||++.||+||.+||.. ....+....+....   ..+...+.++++||.+||.+||++||
T Consensus       189 aPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rp  268 (313)
T KOG0198|consen  189 APEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRP  268 (313)
T ss_pred             CchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCc
Confidence            9999995 2334599999999999999999999987 45555555554332   33334578899999999999999999


Q ss_pred             ChHHHhcCCCcCC
Q 014344          327 GVEEIKGHEFFKG  339 (426)
Q Consensus       327 s~~eil~hp~f~~  339 (426)
                      ||+++|.|||.+.
T Consensus       269 ta~eLL~hpf~~~  281 (313)
T KOG0198|consen  269 TAEELLEHPFLKQ  281 (313)
T ss_pred             CHHHHhhChhhhc
Confidence            9999999999865

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.2e-51  Score=392.05  Aligned_cols=272  Identities=31%  Similarity=0.482  Sum_probs=226.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++++.||+|+||.||+|.+..+++.||+|++.+......          .....+..|+.+++.++|++|+.+++++.
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~il~~l~~~~iv~~~~~~~   70 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------KGEAMALNEKRILEKVNSRFVVSLAYAYE   70 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhh----------hhHHHHHHHHHHHHhcCCCcEEEEEEEEc
Confidence            48999999999999999999999999999999976543322          12345678999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      +++.+++|||||+||+|..++.......+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~  150 (285)
T cd05631          71 TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAV  150 (285)
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcE
Confidence            99999999999999999988765544569999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .....                                                         ......+||+.|+|||++
T Consensus       151 ~~~~~---------------------------------------------------------~~~~~~~g~~~y~aPE~~  173 (285)
T cd05631         151 QIPEG---------------------------------------------------------ETVRGRVGTVGYMAPEVI  173 (285)
T ss_pred             EcCCC---------------------------------------------------------CeecCCCCCCCccCHhhh
Confidence            54211                                                         011234689999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCC-CCCCCCCHHHHHHHHHHhccCCCCCCC----
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET----FYRILCRP-PDLVGEPTPLRNLIRRLLEKDPTKRIG----  327 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~----~~~i~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~s----  327 (426)
                      .+..++.++|||||||++|+|++|+.||.+......    ...+.... ......+..+.+||++||+.||.+||+    
T Consensus       174 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~  253 (285)
T cd05631         174 NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGN  253 (285)
T ss_pred             cCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCC
Confidence            999999999999999999999999999987654221    22222211 222345788999999999999999997    


Q ss_pred             -hHHHhcCCCcCCCChhhhhhc-cCCCCCC
Q 014344          328 -VEEIKGHEFFKGVNWELLLKI-SRPPNIP  355 (426)
Q Consensus       328 -~~eil~hp~f~~~~~~~~~~~-~~~~~~~  355 (426)
                       ++++++||||++++|..+... ..||..|
T Consensus       254 ~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05631         254 GAAGVKQHPIFKNINFKRLEANMLEPPFCP  283 (285)
T ss_pred             CHHHHhcCHhhcCCCHHHHHhCcCCcCCCC
Confidence             899999999999999998754 3344443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-53  Score=394.13  Aligned_cols=280  Identities=32%  Similarity=0.577  Sum_probs=244.8

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcce
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPR   90 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~   90 (426)
                      -+...+|.++.+||+|+||+|.+|..+.+.+.||||++.++.+.+.          +..+-.+.|.++|.... -|+++.
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQd----------DDvectm~EKrvLAL~~kppFL~q  414 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQD----------DDVECTMVEKRVLALPGKPPFLVQ  414 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeec----------CcccceehhhhheecCCCCchHHH
Confidence            4778899999999999999999999999999999999988776433          23344556888888876 589999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ++.+|++-+.+|+||||+.||||.-.+++-+  .|.+..+.+|+++|+.||-+||++|||+||||.+|||++.+|||||+
T Consensus       415 lHScFQTmDRLyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~  492 (683)
T KOG0696|consen  415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIA  492 (683)
T ss_pred             HHHHhhhhhheeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEee
Confidence            9999999999999999999999987776654  49999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+++.-.                                                        .....+.++||||.|
T Consensus       493 DFGmcKEni--------------------------------------------------------~~~~TTkTFCGTPdY  516 (683)
T KOG0696|consen  493 DFGMCKENI--------------------------------------------------------FDGVTTKTFCGTPDY  516 (683)
T ss_pred             ecccccccc--------------------------------------------------------cCCcceeeecCCCcc
Confidence            999997532                                                        123457789999999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCC--
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIG--  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s--  327 (426)
                      +|||++.-.+|+.++||||+||+||||+.|++||.+.+..+.+..|.......+ ..+.++.+++..+|.+.|.+|+.  
T Consensus       517 iAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg  596 (683)
T KOG0696|consen  517 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCG  596 (683)
T ss_pred             cccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCC
Confidence            999999999999999999999999999999999999999999999985544433 45788999999999999999996  


Q ss_pred             ---hHHHhcCCCcCCCChhhhhhccCCCCCCCCCC
Q 014344          328 ---VEEIKGHEFFKGVNWELLLKISRPPNIPARFE  359 (426)
Q Consensus       328 ---~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~  359 (426)
                         -++|..||||+.++|+.+.....+|++.+..+
T Consensus       597 ~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k  631 (683)
T KOG0696|consen  597 PEGERDIREHPFFRRIDWEKLERREIQPPFKPKIK  631 (683)
T ss_pred             CccccchhhCcchhhccHHHHhhccCCCCCCCccc
Confidence               46999999999999999987666665555543

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-52  Score=399.64  Aligned_cols=259  Identities=28%  Similarity=0.473  Sum_probs=221.7

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      +...+.|+.+++||+|.||.||+|++..+|+.||+|.+..+.           ..........+||.||++|+||||++|
T Consensus       113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~-----------~~~~~~~t~~REI~ILr~l~HpNIikL  181 (560)
T KOG0600|consen  113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN-----------EKEGFPITAIREIKILRRLDHPNIIKL  181 (560)
T ss_pred             ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc-----------CCCcchHHHHHHHHHHHhcCCCcccce
Confidence            345678999999999999999999999999999999995543           233456677889999999999999999


Q ss_pred             eeeeecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           92 RGVLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        92 ~~~~~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      .+.....  ..+|||+|||+ -||.-++... .-.|++.+++.|++||+.||+|||++||.|||||..|||||.+|.+||
T Consensus       182 ~eivt~~~~~siYlVFeYMd-hDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKi  259 (560)
T KOG0600|consen  182 EEIVTSKLSGSIYLVFEYMD-HDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKI  259 (560)
T ss_pred             eeEEEecCCceEEEEEeccc-chhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEe
Confidence            9988765  79999999997 7888776543 335999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||||+.+....                                                       ....++.|-|.+
T Consensus       260 aDFGLAr~y~~~~-------------------------------------------------------~~~~T~rVvTLW  284 (560)
T KOG0600|consen  260 ADFGLARFYTPSG-------------------------------------------------------SAPYTSRVVTLW  284 (560)
T ss_pred             ccccceeeccCCC-------------------------------------------------------CcccccceEEee
Confidence            9999999775432                                                       112456688999


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C----------CC-------------
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P----------PD-------------  302 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~----------~~-------------  302 (426)
                      |+|||++.| ..|+.++|+||+|||+.||++|++.|.+.++.+++..|...   |          +.             
T Consensus       285 YRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~  364 (560)
T KOG0600|consen  285 YRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRR  364 (560)
T ss_pred             ccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccch
Confidence            999999998 56999999999999999999999999999999998887511   1          00             


Q ss_pred             ----CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          303 ----LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       303 ----~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                          +...+....+|+..||..||.+|.||.++|.|+||.
T Consensus       365 l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  365 LRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             HHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence                012245678999999999999999999999999994

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=3.2e-51  Score=395.62  Aligned_cols=263  Identities=33%  Similarity=0.597  Sum_probs=225.2

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|+++.+++.||||++.+......          .....+..|..++..+ +||||+++++++.....
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   70 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQD----------DDVECTMTEKRILSLARNHPFLTQLYCCFQTPDR   70 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhc----------cHHHHHHHHHHHHHhccCCCchhceeeEEEcCCE
Confidence            469999999999999999999999999976543221          2345667788888876 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||+||+|..++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        71 ~~iv~Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~  148 (320)
T cd05590          71 LFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF  148 (320)
T ss_pred             EEEEEcCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc
Confidence            99999999999999887654  3499999999999999999999999999999999999999999999999999865321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (320)
T cd05590         149 N--------------------------------------------------------GKTTSTFCGTPDYIAPEILQEML  172 (320)
T ss_pred             C--------------------------------------------------------CCcccccccCccccCHHHHcCCC
Confidence            1                                                        01123456999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCCh------HHHhc
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGV------EEIKG  333 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~------~eil~  333 (426)
                      ++.++|||||||++|+|++|+.||.+.+..+.+..+.......+ ..+..+.+||++||+.||.+|+++      ++++.
T Consensus       173 ~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~  252 (320)
T cd05590         173 YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILR  252 (320)
T ss_pred             CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHc
Confidence            99999999999999999999999999998888888776544333 357889999999999999999998      99999


Q ss_pred             CCCcCCCChhhhhhccCCC
Q 014344          334 HEFFKGVNWELLLKISRPP  352 (426)
Q Consensus       334 hp~f~~~~~~~~~~~~~~~  352 (426)
                      ||||++++|+.+.....+|
T Consensus       253 h~~f~~~~~~~~~~~~~~~  271 (320)
T cd05590         253 HPFFKELDWEKLNRRQIEP  271 (320)
T ss_pred             CCCcCCCCHHHHHhCCCCC
Confidence            9999999999876544333

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-51  Score=402.86  Aligned_cols=301  Identities=31%  Similarity=0.586  Sum_probs=230.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.+......          .....+..|+.+|+.++||||++++++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~E~~il~~l~h~~iv~~~~~~   70 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEK----------EQVAHVRAERDILAEADNPWVVKLYYSF   70 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence            479999999999999999999999999999999976533211          2345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .++..+|+|||||.||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++
T Consensus        71 ~~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  148 (364)
T cd05599          71 QDENYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLC  148 (364)
T ss_pred             EcCCeEEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccc
Confidence            9999999999999999999988754  35999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+.............. .....       ....+.........          ...-.........+.+||+.|+|||+
T Consensus       149 ~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~gt~~y~aPE~  210 (364)
T cd05599         149 TGLKKSHRTEFYRILSH-ALPSN-------FLDFISKPMSSKRK----------AETWKRNRRALAYSTVGTPDYIAPEV  210 (364)
T ss_pred             eeccccccccccccccc-ccccc-------cccccccccccccc----------ccchhhcccccccccccCccccCHHH
Confidence            87643211100000000 00000       00000000000000          00000001112335689999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCCCC---
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIG---  327 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~s---  327 (426)
                      +.+..++.++|||||||++|+|++|.+||.+.+..+.+..+....     +.....+..+++||.+||. +|.+|++   
T Consensus       211 ~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~  289 (364)
T cd05599         211 FLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNG  289 (364)
T ss_pred             HcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCC
Confidence            999999999999999999999999999999998887777765322     1122457889999999996 9999998   


Q ss_pred             hHHHhcCCCcCCCChhhhhh
Q 014344          328 VEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       328 ~~eil~hp~f~~~~~~~~~~  347 (426)
                      +++++.||||++++|+.+..
T Consensus       290 ~~~ll~h~~~~~~~~~~~~~  309 (364)
T cd05599         290 VNEIKSHPFFKGVDWEHIRE  309 (364)
T ss_pred             HHHHhcCCCcCCCCHHHHhh
Confidence            99999999999999998643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-51  Score=406.27  Aligned_cols=308  Identities=33%  Similarity=0.571  Sum_probs=229.5

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.+......          .....+..|+++++.++||||++++++|
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~il~~l~hp~iv~~~~~~   70 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKK----------DQLAHVKAERDVLAESDSPWVVSLYYSF   70 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHh----------HHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            479999999999999999999999999999999976543221          2456788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+...+|+|||||+||+|.+++...  +.+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||++
T Consensus        71 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla  148 (377)
T cd05629          71 QDAQYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLS  148 (377)
T ss_pred             EcCCeeEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccc
Confidence            9999999999999999999988654  45999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhcccccc-ccccccc-cccccccCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCccccccCCCCcc
Q 014344          176 TKLSPKTPQASPKTVLAANTRS-GIKKRRS-FLSKFCSSGISLEDPVHSPRIGPDPPSRSD-SDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gt~~y~a  252 (426)
                      +.+................... ....+.. .....+.....           ... .... ........+.+||+.|+|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~gt~~y~a  216 (377)
T cd05629         149 TGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSS-----------KDQ-IATWKKNRRLMAYSTVGTPDYIA  216 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc-----------hhh-hhhhhhcccccccccCCCccccC
Confidence            7654321110000000000000 0000000 00000000000           000 0000 000011234689999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCC--
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKR--  325 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R--  325 (426)
                      ||++.+..++.++|||||||++|||++|.+||.+.+..+.+..+....     +.....+..+.+||.+||. +|.+|  
T Consensus       217 PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~  295 (377)
T cd05629         217 PEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLG  295 (377)
T ss_pred             HHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCC
Confidence            999999999999999999999999999999999888877777765321     1222357889999999997 67665  


Q ss_pred             -CChHHHhcCCCcCCCChhhhhhc
Q 014344          326 -IGVEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       326 -~s~~eil~hp~f~~~~~~~~~~~  348 (426)
                       +++.+++.||||++++|+.+...
T Consensus       296 r~~~~~~l~hp~~~~~~~~~~~~~  319 (377)
T cd05629         296 RGGAHEIKSHPFFRGVDWDTIRQI  319 (377)
T ss_pred             CCCHHHHhcCCCcCCCCHHHHccC
Confidence             59999999999999999988543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=5.4e-51  Score=394.78  Aligned_cols=266  Identities=33%  Similarity=0.600  Sum_probs=228.1

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC-CCcceeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH-PLLPRLRGVL   95 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~l~~~~   95 (426)
                      +|++++.||+|+||.||+|++..+++.||||++.+......          .....+..|.+++..+.| ++|+.++++|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~i~~~~~~~   70 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQD----------DDVECTMVEKRVLALPGKPPFLTQLHSCF   70 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhcCCCCceeeeEEEE
Confidence            58999999999999999999999999999999976543221          234567789999999986 4688999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ...+.+|+|||||+||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++
T Consensus        71 ~~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~  148 (324)
T cd05587          71 QTMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMC  148 (324)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcc
Confidence            9999999999999999999887654  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ......                                                        .......+||+.|+|||+
T Consensus       149 ~~~~~~--------------------------------------------------------~~~~~~~~gt~~y~aPE~  172 (324)
T cd05587         149 KENIFG--------------------------------------------------------GKTTRTFCGTPDYIAPEI  172 (324)
T ss_pred             eecCCC--------------------------------------------------------CCceeeecCCccccChhh
Confidence            643210                                                        011234569999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCCh-----H
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGV-----E  329 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~-----~  329 (426)
                      +.+..++.++|||||||++|+|++|+.||.+.+..+.+..+....... ...+..+.+||.+||.+||.+|++.     +
T Consensus       173 ~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~  252 (324)
T cd05587         173 IAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGER  252 (324)
T ss_pred             hcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHH
Confidence            999999999999999999999999999999998888887776544332 3457889999999999999999986     8


Q ss_pred             HHhcCCCcCCCChhhhhhccC
Q 014344          330 EIKGHEFFKGVNWELLLKISR  350 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~~~~~  350 (426)
                      +++.||||+.++|..+.....
T Consensus       253 ~~~~hp~~~~~~~~~~~~~~~  273 (324)
T cd05587         253 DIREHAFFRRIDWEKLERREI  273 (324)
T ss_pred             HHhcCCCcCCCCHHHHHhCCC
Confidence            999999999999998865443

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-51  Score=401.86  Aligned_cols=299  Identities=36%  Similarity=0.670  Sum_probs=236.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.+......          .....+..|+.++..+.||||+++++++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~i~~~~~~~   70 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKR----------NQIAHVRAERDILADADSPWIVKLYYSF   70 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhc----------cHHHHHHHHHHHHHhcCCCCccchhhhe
Confidence            469999999999999999999999999999999976543221          2346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+++.+|+||||++|++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        71 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~  148 (350)
T cd05573          71 QDEEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLC  148 (350)
T ss_pred             ecCCeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCC
Confidence            9999999999999999999998765  45999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+............             ......+.              ...................+||+.|+|||+
T Consensus       149 ~~~~~~~~~~~~~~~-------------~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  201 (350)
T cd05573         149 KKMNKAKDREYYLND-------------SHNLLFRD--------------NVLVRRRDHKQRRVRANSTVGTPDYIAPEV  201 (350)
T ss_pred             ccCcccCcccccccc-------------cccccccc--------------cccccccccccccccccccccCccccCHHH
Confidence            876432211000000             00000000              000000001111223445679999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----CCCCCCCCCHHHHHHHHHHhccCCCCCCC-hH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-----RPPDLVGEPTPLRNLIRRLLEKDPTKRIG-VE  329 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~s-~~  329 (426)
                      +.+..++.++|||||||++|+|++|+.||...+..+.+.++..     ..+.....+..+.+||.+||. ||.+|++ ++
T Consensus       202 ~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~  280 (350)
T cd05573         202 LRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFE  280 (350)
T ss_pred             HcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHH
Confidence            9999999999999999999999999999999988777777765     122233458899999999997 9999999 99


Q ss_pred             HHhcCCCcCCCChhhhhhccCCCCCC
Q 014344          330 EIKGHEFFKGVNWELLLKISRPPNIP  355 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~~~~~~~~~~  355 (426)
                      ++++||||++++|+.... ..++..|
T Consensus       281 ~ll~hp~~~~~~~~~~~~-~~~~~~~  305 (350)
T cd05573         281 EIKSHPFFKGIDWENLRE-TKPPFVP  305 (350)
T ss_pred             HHhcCCCcCCCCHHHHhh-CCCCcCC
Confidence            999999999999998763 3344433

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.1e-51  Score=404.50  Aligned_cols=269  Identities=31%  Similarity=0.562  Sum_probs=229.4

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+..++|++++.||+|+||.||+|++..+++.||+|++.+......          .....+..|+.+++.++||||+
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~h~~iv  106 (370)
T cd05596          37 KLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKR----------SDSAFFWEERDIMAHANSEWIV  106 (370)
T ss_pred             cCCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhCCCCCcc
Confidence            456778899999999999999999999999999999999976543222          1234567899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.++..+|+|||||+||+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||
T Consensus       107 ~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL  183 (370)
T cd05596         107 QLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKL  183 (370)
T ss_pred             eEEEEEecCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEE
Confidence            9999999999999999999999999987643   4899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                       .......+||+.
T Consensus       184 ~DfG~~~~~~~~~-------------------------------------------------------~~~~~~~~gt~~  208 (370)
T cd05596         184 ADFGTCMKMDANG-------------------------------------------------------MVRCDTAVGTPD  208 (370)
T ss_pred             EeccceeeccCCC-------------------------------------------------------cccCCCCCCCcC
Confidence            9999987653210                                                       011234579999


Q ss_pred             CccchhhcCC----CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhcc
Q 014344          250 YVAPEIIEGK----GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       250 y~aPE~~~~~----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~  320 (426)
                      |+|||++.+.    .++.++|||||||++|||++|++||.+.+....+..+....     +.....+..+.+||.+||+.
T Consensus       209 y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  288 (370)
T cd05596         209 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTD  288 (370)
T ss_pred             eECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccC
Confidence            9999998754    37889999999999999999999999998888888776432     22224578899999999999


Q ss_pred             CCCC--CCChHHHhcCCCcCCCChhhhh
Q 014344          321 DPTK--RIGVEEIKGHEFFKGVNWELLL  346 (426)
Q Consensus       321 dP~~--R~s~~eil~hp~f~~~~~~~~~  346 (426)
                      +|.+  |++++++++||||++.+|....
T Consensus       289 ~p~r~~R~s~~ell~h~~~~~~~~~~~~  316 (370)
T cd05596         289 REVRLGRNGVDEIKSHPFFKNDQWTFDN  316 (370)
T ss_pred             hhhccCCCCHHHHhcCcccCCCChhhHH
Confidence            9988  9999999999999998887543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.9e-51  Score=397.28  Aligned_cols=263  Identities=38%  Similarity=0.664  Sum_probs=225.1

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      +.||+|+||.||+|++..+++.||+|++.+......          .....+..|+.+|+.++||||+++++++..++.+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   70 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAK----------DEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRL   70 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEE
Confidence            468999999999999999999999999976543221          2356778899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK  181 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~  181 (426)
                      |+||||++||+|..++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus        71 ~lv~Ey~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~  148 (328)
T cd05593          71 CFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD  148 (328)
T ss_pred             EEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc
Confidence            9999999999998887654  35999999999999999999999999999999999999999999999999998643210


Q ss_pred             CCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCC
Q 014344          182 TPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH  261 (426)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  261 (426)
                                                                              .......+||+.|+|||++.+..+
T Consensus       149 --------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~  172 (328)
T cd05593         149 --------------------------------------------------------AATMKTFCGTPEYLAPEVLEDNDY  172 (328)
T ss_pred             --------------------------------------------------------ccccccccCCcCccChhhhcCCCC
Confidence                                                                    011234569999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCC-----ChHHHhcCC
Q 014344          262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHE  335 (426)
Q Consensus       262 ~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~-----s~~eil~hp  335 (426)
                      +.++|||||||++|+|++|+.||.+.+..+....+...... ....+..+.+||.+||.+||++|+     ++.+|++||
T Consensus       173 ~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  252 (328)
T cd05593         173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS  252 (328)
T ss_pred             CccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence            99999999999999999999999988877777666544333 234578899999999999999997     899999999


Q ss_pred             CcCCCChhhhhhccCCC
Q 014344          336 FFKGVNWELLLKISRPP  352 (426)
Q Consensus       336 ~f~~~~~~~~~~~~~~~  352 (426)
                      ||.+.+|..+......+
T Consensus       253 ~~~~~~~~~~~~~~~~~  269 (328)
T cd05593         253 FFTGVNWQDVYDKKLVP  269 (328)
T ss_pred             CcCCCCHHHHHhCCCCC
Confidence            99999999876544333

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.2e-51  Score=405.53  Aligned_cols=314  Identities=30%  Similarity=0.525  Sum_probs=233.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||||++.+......          .....+..|+.+|+.++||||+++++.|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~il~~l~h~~iv~~~~~~   70 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMR----------NQAAHVKAERDILAEADNEWVVKLYYSF   70 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhh----------hhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            479999999999999999999999999999999966443221          1345677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+++.+|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|
T Consensus        71 ~~~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a  148 (376)
T cd05598          71 QDKDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC  148 (376)
T ss_pred             EcCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCC
Confidence            9999999999999999999998754  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+...........  ..         ........... ......... ....................+||+.|||||+
T Consensus       149 ~~~~~~~~~~~~~~--~~---------~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  215 (376)
T cd05598         149 TGFRWTHDSKYYQK--GD---------HHRQDSMEPSE-EWSEIDRCR-LKPLERRRKRQHQRCLAHSLVGTPNYIAPEV  215 (376)
T ss_pred             cccccccccccccc--cc---------ccccccccccc-ccccccccc-ccchhhhhhhhcccccccccCCCccccCHHH
Confidence            75532110000000  00         00000000000 000000000 0000000000001122346789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCCC---C
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRI---G  327 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~---s  327 (426)
                      +.+..++.++|||||||++|+|++|+.||.+.+..+....+....     +.....+..+.+||.+|+ .+|.+|+   +
T Consensus       216 ~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t  294 (376)
T cd05598         216 LLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNG  294 (376)
T ss_pred             HcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCC
Confidence            999999999999999999999999999999988777666654321     222345788999999976 5999999   9


Q ss_pred             hHHHhcCCCcCCCChhhhhhccCCCCCC
Q 014344          328 VEEIKGHEFFKGVNWELLLKISRPPNIP  355 (426)
Q Consensus       328 ~~eil~hp~f~~~~~~~~~~~~~~~~~~  355 (426)
                      +.++++||||++++|........++.+|
T Consensus       295 ~~ell~h~~~~~~~~~~~~~~~~~~~~~  322 (376)
T cd05598         295 ADEIKAHPFFKGIDFASLIRRQKAPYIP  322 (376)
T ss_pred             HHHHhCCCCcCCCCHHHHhhcCCCCCCC
Confidence            9999999999999998886444444444

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-52  Score=397.04  Aligned_cols=256  Identities=32%  Similarity=0.498  Sum_probs=231.4

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |.+.+.||+|-|++|.+|++..||+.||||+++|..+...           ....+.+|+++|+...|||||++|++..+
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-----------st~hlfqEVRCMKLVQHpNiVRLYEViDT   88 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-----------STGHLFQEVRCMKLVQHPNIVRLYEVIDT   88 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-----------hhhHHHHHHHHHHHhcCcCeeeeeehhcc
Confidence            8888999999999999999999999999999987654433           34578889999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec-cCCcEEEecccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ-ENGHIMLVDFDLST  176 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~-~~g~ikL~DFgls~  176 (426)
                      ...+|||+|+=+||||++|+..+..+ +.++.++.|++||+.|+.|||+..+|||||||+||.+- .-|-|||+|||++.
T Consensus        89 QTKlyLiLELGD~GDl~DyImKHe~G-l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSN  167 (864)
T KOG4717|consen   89 QTKLYLILELGDGGDLFDYIMKHEEG-LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSN  167 (864)
T ss_pred             cceEEEEEEecCCchHHHHHHhhhcc-ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccc
Confidence            99999999999999999998876544 99999999999999999999999999999999999776 46899999999998


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+.++                                                         .+.+++||+..|-|||++
T Consensus       168 kf~PG---------------------------------------------------------~kL~TsCGSLAYSAPEIL  190 (864)
T KOG4717|consen  168 KFQPG---------------------------------------------------------KKLTTSCGSLAYSAPEIL  190 (864)
T ss_pred             cCCCc---------------------------------------------------------chhhcccchhhccCchhh
Confidence            87643                                                         467788999999999999


Q ss_pred             cCCCCC-hhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHD-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~-~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .|..|+ .++||||||||||.|++|++||...+..+++..|+......+ ..+.+++|||..||+.||.+|.+.+||..|
T Consensus       191 LGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  191 LGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             hcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence            999996 789999999999999999999999999999999985544333 447889999999999999999999999999


Q ss_pred             CCcCCCCh
Q 014344          335 EFFKGVNW  342 (426)
Q Consensus       335 p~f~~~~~  342 (426)
                      +|+++++-
T Consensus       271 ~Wlq~~D~  278 (864)
T KOG4717|consen  271 SWLQAGDR  278 (864)
T ss_pred             ccccCCCC
Confidence            99998763

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=6.9e-51  Score=399.72  Aligned_cols=299  Identities=30%  Similarity=0.549  Sum_probs=231.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.+......          .....+..|+.++..++||+|+++++.|
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~~~iv~~~~~~   70 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEK----------EQVAHIRAERDILVEADGAWVVKMFYSF   70 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhh----------hhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            469999999999999999999999999999999975432221          2456788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+++.+|+|||||+||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|+++|+|||++
T Consensus        71 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~  148 (360)
T cd05627          71 QDKRNLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLC  148 (360)
T ss_pred             EcCCEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCC
Confidence            9999999999999999999988654  34999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+........... .....               ...........     ................+.+||+.|+|||+
T Consensus       149 ~~~~~~~~~~~~~~-~~~~~---------------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  207 (360)
T cd05627         149 TGLKKAHRTEFYRN-LTHNP---------------PSDFSFQNMNS-----KRKAETWKKNRRQLAYSTVGTPDYIAPEV  207 (360)
T ss_pred             cccccccccccccc-cccCC---------------ccccccccccc-----ccccccccccccccccccCCCccccCHHH
Confidence            86643211000000 00000               00000000000     00000000011223346789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCCCC---
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIG---  327 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~s---  327 (426)
                      +.+..++.++|||||||++|||++|++||.+.+....+.++....     +.....+..+++||.+|+ .||.+|++   
T Consensus       208 ~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~  286 (360)
T cd05627         208 FMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNG  286 (360)
T ss_pred             HcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCC
Confidence            999999999999999999999999999999998888877776421     112235778999999987 49999994   


Q ss_pred             hHHHhcCCCcCCCChhhhhhc
Q 014344          328 VEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       328 ~~eil~hp~f~~~~~~~~~~~  348 (426)
                      ++++++||||++++|+.+...
T Consensus       287 ~~ei~~hp~f~~~~~~~~~~~  307 (360)
T cd05627         287 VEEIKSHPFFEGVDWGHIRER  307 (360)
T ss_pred             HHHHhcCCCCCCCCHHHHhcC
Confidence            799999999999999998653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.1e-50  Score=392.62  Aligned_cols=263  Identities=33%  Similarity=0.631  Sum_probs=224.3

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHH---HhcCCCCcceeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL---RNVEHPLLPRLRGV   94 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il---~~l~hp~iv~l~~~   94 (426)
                      |++++.||+|+||.||+|.+..+++.||||++.+......          .....+..|++++   +.++||||++++++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~   70 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIAR----------DEVESLMCEKRIFETANSERHPFLVNLFAC   70 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhccccCCCChhceeeE
Confidence            7899999999999999999999999999999976543221          1344566676665   45679999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.+...+|+|||||+|++|..++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        71 ~~~~~~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~  147 (324)
T cd05589          71 FQTEDHVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGL  147 (324)
T ss_pred             EEcCCEEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccC
Confidence            9999999999999999999877653   3599999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +......                                                        .......+||+.|+|||
T Consensus       148 ~~~~~~~--------------------------------------------------------~~~~~~~~g~~~y~aPE  171 (324)
T cd05589         148 CKEGMGF--------------------------------------------------------GDRTSTFCGTPEFLAPE  171 (324)
T ss_pred             CccCCCC--------------------------------------------------------CCcccccccCccccCHh
Confidence            8643211                                                        11223457999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC-----Ch
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI-----GV  328 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~-----s~  328 (426)
                      ++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+....... ...+..+.+||.+||+.||.+||     ++
T Consensus       172 ~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~  251 (324)
T cd05589         172 VLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDA  251 (324)
T ss_pred             HhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCH
Confidence            9999999999999999999999999999999998888777776544333 34578899999999999999999     69


Q ss_pred             HHHhcCCCcCCCChhhhhhcc
Q 014344          329 EEIKGHEFFKGVNWELLLKIS  349 (426)
Q Consensus       329 ~eil~hp~f~~~~~~~~~~~~  349 (426)
                      .++++||||++++|.......
T Consensus       252 ~~l~~~~~f~~~~~~~~~~~~  272 (324)
T cd05589         252 EDVKKQPFFRDINWDDLLARK  272 (324)
T ss_pred             HHHhhCCCcCCCCHHHHHhCC
Confidence            999999999999998876543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-51  Score=392.11  Aligned_cols=257  Identities=37%  Similarity=0.654  Sum_probs=223.1

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEE
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGY  103 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l  103 (426)
                      ||+|+||+||+|++..+++.||+|++.+......          .....+..|+.+|++++||||+++++++..+..+|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~----------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   70 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSR----------SEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYL   70 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEE
Confidence            7999999999999999999999999976433221          234567789999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCC
Q 014344          104 AIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP  183 (426)
Q Consensus       104 V~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~  183 (426)
                      |||||+||+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......  
T Consensus        71 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--  146 (312)
T cd05585          71 VLAFINGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD--  146 (312)
T ss_pred             EEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC--
Confidence            99999999999988754  34999999999999999999999999999999999999999999999999998753211  


Q ss_pred             CCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCCh
Q 014344          184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF  263 (426)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  263 (426)
                                                                            .......+||+.|+|||++.+..++.
T Consensus       147 ------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~  172 (312)
T cd05585         147 ------------------------------------------------------DDKTNTFCGTPEYLAPELLLGHGYTK  172 (312)
T ss_pred             ------------------------------------------------------CCccccccCCcccCCHHHHcCCCCCC
Confidence                                                                  01223457999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC---ChHHHhcCCCcCC
Q 014344          264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI---GVEEIKGHEFFKG  339 (426)
Q Consensus       264 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~---s~~eil~hp~f~~  339 (426)
                      ++|||||||++|+|++|+.||.+.+..+.+..+...+..+ ...+..+.+||.+||..||.+||   ++.+++.||||+.
T Consensus       173 ~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~  252 (312)
T cd05585         173 AVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ  252 (312)
T ss_pred             ccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence            9999999999999999999999988888888877655443 34578899999999999999997   4799999999999


Q ss_pred             CChhhhhhc
Q 014344          340 VNWELLLKI  348 (426)
Q Consensus       340 ~~~~~~~~~  348 (426)
                      .+|..+...
T Consensus       253 ~~~~~~~~~  261 (312)
T cd05585         253 LSWKKLLMK  261 (312)
T ss_pred             CCHHHHHhC
Confidence            999876543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=8.7e-51  Score=393.12  Aligned_cols=260  Identities=35%  Similarity=0.656  Sum_probs=224.0

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      +.||+|+||.||+|++..+|+.||+|++.+......          .....+..|+.+++.++||||++++++|.....+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~   70 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL   70 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------HHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEE
Confidence            469999999999999999999999999976543221          2345677899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK  181 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~  181 (426)
                      |+||||++||+|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        71 ~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  148 (323)
T cd05595          71 CFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  148 (323)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC
Confidence            9999999999998887654  35899999999999999999999999999999999999999999999999998643211


Q ss_pred             CCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCC
Q 014344          182 TPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH  261 (426)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  261 (426)
                      .                                                        ......+||+.|+|||++.+..+
T Consensus       149 ~--------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~  172 (323)
T cd05595         149 G--------------------------------------------------------ATMKTFCGTPEYLAPEVLEDNDY  172 (323)
T ss_pred             C--------------------------------------------------------CccccccCCcCcCCcccccCCCC
Confidence            0                                                        11223569999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCC-----ChHHHhcCC
Q 014344          262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHE  335 (426)
Q Consensus       262 ~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~-----s~~eil~hp  335 (426)
                      +.++|||||||++|+|++|+.||...+....+..+...... ....++.+.+||.+||..||.+|+     ++.++++||
T Consensus       173 ~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~  252 (323)
T cd05595         173 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  252 (323)
T ss_pred             CchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence            99999999999999999999999988887777776544332 235578999999999999999998     899999999


Q ss_pred             CcCCCChhhhhhcc
Q 014344          336 FFKGVNWELLLKIS  349 (426)
Q Consensus       336 ~f~~~~~~~~~~~~  349 (426)
                      ||.+.+|..+....
T Consensus       253 ~~~~~~~~~~~~~~  266 (323)
T cd05595         253 FFLSINWQDVVQKK  266 (323)
T ss_pred             CcCCCCHHHHHhCC
Confidence            99999999876543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-52  Score=381.06  Aligned_cols=256  Identities=28%  Similarity=0.430  Sum_probs=217.8

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|..++.||+|+||.|+.|.++.+|+.||||.+...           ..+....++..+|+++|+.++|+||+.+.+++.
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-----------F~~~~~akRtlRElklLr~~~HeNIi~l~di~~   91 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-----------FENQIDAKRTLRELKLLRHLRHENIIGLLDIFR   91 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-----------hhchHHHHHHHHHHHHHHHhcCCCcceEEeecc
Confidence            355589999999999999999999999999998422           123345788999999999999999999999996


Q ss_pred             c-----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           97 T-----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        97 ~-----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      .     -+.+|+|+|+| +.||...++.+.  .+++..++.++.||+.||+|+|+.||+||||||.|+|++.+..+||+|
T Consensus        92 p~~~~~f~DvYiV~elM-etDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~D  168 (359)
T KOG0660|consen   92 PPSRDKFNDVYLVFELM-ETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICD  168 (359)
T ss_pred             cccccccceeEEehhHH-hhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecc
Confidence            5     35799999999 599999888653  399999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+.....                                                      ......+.++.|.+|+
T Consensus       169 FGLAR~~~~~------------------------------------------------------~~~~~mTeYVaTRWYR  194 (359)
T KOG0660|consen  169 FGLARYLDKF------------------------------------------------------FEDGFMTEYVATRWYR  194 (359)
T ss_pred             ccceeecccc------------------------------------------------------Ccccchhcceeeeeec
Confidence            9999976432                                                      0123456778999999


Q ss_pred             cchhhc-CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----------------------C------
Q 014344          252 APEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----------------------P------  301 (426)
Q Consensus       252 aPE~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----------------------~------  301 (426)
                      |||++. ...|+.++||||+|||+.||++|++.|.|.+...++..|+...                       +      
T Consensus       195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~  274 (359)
T KOG0660|consen  195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP  274 (359)
T ss_pred             CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence            999865 5789999999999999999999999999998777666553110                       1      


Q ss_pred             ---CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 ---DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 ---~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                         .+++.++.+.||+.+||..||.+|+|++|+|+||||+..
T Consensus       275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence               123456778999999999999999999999999999863

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=7e-51  Score=400.60  Aligned_cols=267  Identities=33%  Similarity=0.581  Sum_probs=224.6

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ..+..++|++++.||+|+||.||+|++..+++.||+|++.+......          .....+..|+.+++.++||||++
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~i~~~~~hp~iv~  107 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKR----------SDSAFFWEERDIMAFANSPWVVQ  107 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhCCCCCEee
Confidence            34566889999999999999999999999999999999976433221          12345778999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++.++..+|+|||||+||+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+
T Consensus       108 ~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~  184 (370)
T cd05621         108 LFCAFQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLA  184 (370)
T ss_pred             EEEEEEcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEE
Confidence            999999999999999999999999988643   38999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++..+....                                                       .....+.+||+.|
T Consensus       185 DFG~a~~~~~~~-------------------------------------------------------~~~~~~~~gt~~Y  209 (370)
T cd05621         185 DFGTCMKMDETG-------------------------------------------------------MVRCDTAVGTPDY  209 (370)
T ss_pred             ecccceecccCC-------------------------------------------------------ceecccCCCCccc
Confidence            999987653110                                                       0122355799999


Q ss_pred             ccchhhcCCC----CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccC
Q 014344          251 VAPEIIEGKG----HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       251 ~aPE~~~~~~----~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~d  321 (426)
                      +|||++.+..    ++.++|||||||++|+|++|+.||.+.+....+.++....     +.....+..++++|.+||+.+
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~  289 (370)
T cd05621         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDR  289 (370)
T ss_pred             CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCc
Confidence            9999997643    7889999999999999999999999998888887776432     222245788999999999866


Q ss_pred             CCC--CCChHHHhcCCCcCCCChhhh
Q 014344          322 PTK--RIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       322 P~~--R~s~~eil~hp~f~~~~~~~~  345 (426)
                      +.+  |+++.|+++||||+...|...
T Consensus       290 ~~r~~R~~~~e~l~hp~~~~~~~~~~  315 (370)
T cd05621         290 EVRLGRNGVEEIKQHPFFKNDQWNWD  315 (370)
T ss_pred             hhccCCCCHHHHhcCcccCCCCcChH
Confidence            554  889999999999998666543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.4e-51  Score=373.77  Aligned_cols=258  Identities=27%  Similarity=0.384  Sum_probs=218.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .++.|+.+.+|++|+||.||+|+++.|++.||+|.++.+.           .....--.-.+|+.+|.++.|||||.+.+
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-----------ek~GFPItsLREIniLl~~~H~NIV~vkE  142 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-----------EKEGFPITSLREINILLKARHPNIVEVKE  142 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-----------ccCCCcchhHHHHHHHHhcCCCCeeeeEE
Confidence            3567999999999999999999999999999999986543           11112234567999999999999999999


Q ss_pred             eee--cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           94 VLS--TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        94 ~~~--~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +..  +-+.+|+|||||+ -||.+++.... ++|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|
T Consensus       143 VVvG~~~d~iy~VMe~~E-hDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaD  220 (419)
T KOG0663|consen  143 VVVGSNMDKIYIVMEYVE-HDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIAD  220 (419)
T ss_pred             EEeccccceeeeeHHHHH-hhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecc
Confidence            875  3457999999997 89999987665 6799999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+.+...                                                        ....+..|-|.+|+
T Consensus       221 FGLAR~ygsp--------------------------------------------------------~k~~T~lVVTLWYR  244 (419)
T KOG0663|consen  221 FGLAREYGSP--------------------------------------------------------LKPYTPLVVTLWYR  244 (419)
T ss_pred             cchhhhhcCC--------------------------------------------------------cccCcceEEEeeec
Confidence            9999987532                                                        12345668899999


Q ss_pred             cchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C--CCCC---------------------
Q 014344          252 APEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P--PDLV---------------------  304 (426)
Q Consensus       252 aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~--~~~~---------------------  304 (426)
                      |||++.| ..|+.++|+||+|||+.||+++++.|.|.+..+++.+|+..   |  ..++                     
T Consensus       245 aPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~l  324 (419)
T KOG0663|consen  245 APELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNL  324 (419)
T ss_pred             CHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhh
Confidence            9999988 56899999999999999999999999999998888877421   1  0000                     


Q ss_pred             -------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          305 -------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       305 -------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                             ..+....+|+..+|.+||.+|.||+|.|+|+||.+.
T Consensus       325 r~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  325 RKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence                   112456799999999999999999999999999863

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-51  Score=396.93  Aligned_cols=256  Identities=32%  Similarity=0.558  Sum_probs=229.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~   93 (426)
                      ...|++.+.||+|.||+||+|+++.+|+.+|+|++.+......          .....+.+|+.||+++. ||||+.+++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~----------~~~~~v~~Ev~il~~l~~hpniv~l~~  103 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK----------EDREDVRREVAILQQLSGHPNIVQLKD  103 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc----------ccHHHHHHHHHHHHhccCCCCEEEEEE
Confidence            3469999999999999999999999999999999987665332          14567889999999999 999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC----CcEEE
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN----GHIML  169 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~----g~ikL  169 (426)
                      +|++...+++|||+|.||+|++.+...  . +++..+..++.|++.|+.|||+.||+||||||+|+|+...    +.+|+
T Consensus       104 ~~e~~~~~~lvmEL~~GGeLfd~i~~~--~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~  180 (382)
T KOG0032|consen  104 AFEDPDSVYLVMELCEGGELFDRIVKK--H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKL  180 (382)
T ss_pred             EEEcCCeEEEEEEecCCchHHHHHHHc--c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEE
Confidence            999999999999999999999988766  2 9999999999999999999999999999999999999743    57999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.....                                                         .......||||.
T Consensus       181 ~DFGla~~~~~---------------------------------------------------------~~~~~~~~Gtp~  203 (382)
T KOG0032|consen  181 IDFGLAKFIKP---------------------------------------------------------GERLHTIVGTPE  203 (382)
T ss_pred             eeCCCceEccC---------------------------------------------------------CceEeeecCCcc
Confidence            99999987643                                                         234567789999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      |+|||++...+|+..+||||+||++|.|++|.+||.+.+....+..+....     +.+...+..+++||++||..||.+
T Consensus       204 y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~  283 (382)
T KOG0032|consen  204 YVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRK  283 (382)
T ss_pred             ccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCccc
Confidence            999999999999999999999999999999999999999999988887543     344556788999999999999999


Q ss_pred             CCChHHHhcCCCcCCC
Q 014344          325 RIGVEEIKGHEFFKGV  340 (426)
Q Consensus       325 R~s~~eil~hp~f~~~  340 (426)
                      |+|+.++|+|||+++.
T Consensus       284 R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  284 RLTAAQALQHPWIKSI  299 (382)
T ss_pred             CCCHHHHhcCccccCC
Confidence            9999999999999764

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.7e-50  Score=390.76  Aligned_cols=260  Identities=33%  Similarity=0.609  Sum_probs=223.6

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||.||+|++..+++.||||++.+......          .....+..|.+++..+ +||||++++++|...+.
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~   70 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQD----------DDVDCTMTEKRILALAAKHPFLTALHCCFQTKDR   70 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhh----------hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCe
Confidence            469999999999999999999999999976543221          2345667788898876 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||+|++|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus        71 ~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~  148 (321)
T cd05591          71 LFFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL  148 (321)
T ss_pred             EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceeccc
Confidence            99999999999999887654  3489999999999999999999999999999999999999999999999999865321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (321)
T cd05591         149 N--------------------------------------------------------GVTTTTFCGTPDYIAPEILQELE  172 (321)
T ss_pred             C--------------------------------------------------------CccccccccCccccCHHHHcCCC
Confidence            1                                                        01123456999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCC-------ChHHHh
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRI-------GVEEIK  332 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~-------s~~eil  332 (426)
                      ++.++|||||||++|+|++|+.||.+.+..+.+..+.......+ ..+..+.+||.+||+.||++|+       ++++++
T Consensus       173 ~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~  252 (321)
T cd05591         173 YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIK  252 (321)
T ss_pred             CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHh
Confidence            99999999999999999999999999998888888775543332 3478899999999999999999       899999


Q ss_pred             cCCCcCCCChhhhhhcc
Q 014344          333 GHEFFKGVNWELLLKIS  349 (426)
Q Consensus       333 ~hp~f~~~~~~~~~~~~  349 (426)
                      +||||..++|..+....
T Consensus       253 ~hp~~~~~~~~~~~~~~  269 (321)
T cd05591         253 QHPFFKEIDWVLLEQRK  269 (321)
T ss_pred             cCCccCCCCHHHHHhCC
Confidence            99999999999876543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2.1e-50  Score=390.42  Aligned_cols=266  Identities=33%  Similarity=0.590  Sum_probs=227.8

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVL   95 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~   95 (426)
                      +|++++.||+|+||.||+|++..+++.||||++.+......          .....+..|..++..+. ||+|+.+++++
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~i~~~~~~~   70 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQD----------DDVECTMVEKRVLALSGKPPFLTQLHSCF   70 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhccCCCeEeeEEEEE
Confidence            58999999999999999999999999999999976543221          23345667888888774 89999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ...+.+|+||||++||+|..++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        71 ~~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~  148 (323)
T cd05616          71 QTMDRLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMC  148 (323)
T ss_pred             ecCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCc
Confidence            9999999999999999999887654  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ......                                                        .......+||+.|+|||+
T Consensus       149 ~~~~~~--------------------------------------------------------~~~~~~~~gt~~y~aPE~  172 (323)
T cd05616         149 KENMWD--------------------------------------------------------GVTTKTFCGTPDYIAPEI  172 (323)
T ss_pred             eecCCC--------------------------------------------------------CCccccCCCChhhcCHHH
Confidence            643210                                                        011234569999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCCh-----H
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGV-----E  329 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~-----~  329 (426)
                      +.+..++.++|||||||++|+|++|+.||.+.+....+..+....... ...+..+.+||.+||+.||.+|+++     .
T Consensus       173 ~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~  252 (323)
T cd05616         173 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGER  252 (323)
T ss_pred             hcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHH
Confidence            999999999999999999999999999999998888887776544332 3467889999999999999999984     8


Q ss_pred             HHhcCCCcCCCChhhhhhccC
Q 014344          330 EIKGHEFFKGVNWELLLKISR  350 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~~~~~  350 (426)
                      +++.||||+.++|+.+.....
T Consensus       253 ~i~~h~~~~~~~~~~~~~~~~  273 (323)
T cd05616         253 DIKEHAFFRYIDWEKLERKEV  273 (323)
T ss_pred             HHhcCCCcCCCCHHHHHhCCC
Confidence            999999999999998875443

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.1e-50  Score=393.61  Aligned_cols=265  Identities=32%  Similarity=0.592  Sum_probs=227.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||+||+|++..+++.||||++.+......          .....+..|+.+++.++||||+++++++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~i~~~~~~~~i~~~~~~~   70 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQ----------ETVSFFEEERDILSISNSPWIPQLQYAF   70 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCCCcceeeEE
Confidence            469999999999999999999999999999999976543211          2345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+...+|+|||||+||+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++
T Consensus        71 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a  149 (330)
T cd05601          71 QDKDNLYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSA  149 (330)
T ss_pred             ecCCeEEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCC
Confidence            99999999999999999999987653 35999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+.....                                                       ......+||+.|+|||+
T Consensus       150 ~~~~~~~~-------------------------------------------------------~~~~~~~gt~~y~aPE~  174 (330)
T cd05601         150 ARLTANKM-------------------------------------------------------VNSKLPVGTPDYIAPEV  174 (330)
T ss_pred             eECCCCCc-------------------------------------------------------eeeecccCCccccCHHH
Confidence            76532110                                                       01123368999999999


Q ss_pred             hc------CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCC
Q 014344          256 IE------GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       256 ~~------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.      +..++.++|||||||++|+|++|+.||...+....+.+++...     +.....+..+.+||.+||. +|.+
T Consensus       175 ~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~  253 (330)
T cd05601         175 LTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKE  253 (330)
T ss_pred             hccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-Chhh
Confidence            87      4567899999999999999999999999988887777775432     2223457889999999997 9999


Q ss_pred             CCChHHHhcCCCcCCCChhhhhh
Q 014344          325 RIGVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       325 R~s~~eil~hp~f~~~~~~~~~~  347 (426)
                      |||++++++||||+.++|..+..
T Consensus       254 R~t~~~l~~h~~~~~~~~~~~~~  276 (330)
T cd05601         254 RLGYEGLCCHPFFSKIDWNNIRN  276 (330)
T ss_pred             CCCHHHHhCCCCcCCCCHHHHhh
Confidence            99999999999999999998754

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-52  Score=398.25  Aligned_cols=279  Identities=36%  Similarity=0.638  Sum_probs=247.9

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+.+++++++..||-|+||.|=++........+|+|+++|..+..-          .+...+..|.+||..+..|+||
T Consensus       414 ~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdt----------kQqeHv~sEr~Im~~~~s~fIv  483 (732)
T KOG0614|consen  414 FAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDT----------KQQEHVFSERNIMMECRSDFIV  483 (732)
T ss_pred             hcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccch----------hHHHHHHhHHHHHHhcCchHHH
Confidence            456788999999999999999999999877666799999988766432          3456788899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++|-.|.+++++|+.||-|-||+|++.++.+  +.|.+..+++|++-++.|++|||++|||+|||||||+|++.+|.+||
T Consensus       484 rLYrTfrd~kyvYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KL  561 (732)
T KOG0614|consen  484 RLYRTFRDSKYVYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKL  561 (732)
T ss_pred             HHHHHhccchhhhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEE
Confidence            9999999999999999999999999998765  44999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      .|||+|+.+.                                                         +++++++|||||.
T Consensus       562 VDFGFAKki~---------------------------------------------------------~g~KTwTFcGTpE  584 (732)
T KOG0614|consen  562 VDFGFAKKIG---------------------------------------------------------SGRKTWTFCGTPE  584 (732)
T ss_pred             eehhhHHHhc---------------------------------------------------------cCCceeeecCCcc
Confidence            9999999874                                                         3468899999999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---CCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD---LVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++..++++.++|+||||+++|||++|.+||.+.++..+|..|+.....   +...+..+.+||+++...+|.+|+
T Consensus       585 YVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERL  664 (732)
T KOG0614|consen  585 YVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERL  664 (732)
T ss_pred             cccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhh
Confidence            99999999999999999999999999999999999999999999999865322   223356678999999999999999


Q ss_pred             C-----hHHHhcCCCcCCCChhhhhhccCCCCCCCC
Q 014344          327 G-----VEEIKGHEFFKGVNWELLLKISRPPNIPAR  357 (426)
Q Consensus       327 s-----~~eil~hp~f~~~~~~~~~~~~~~~~~~~~  357 (426)
                      .     +.+|.+|-||.+.||+.+....-||++.+.
T Consensus       665 G~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~  700 (732)
T KOG0614|consen  665 GYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPS  700 (732)
T ss_pred             ccccCChHHHHhhhhhhcCChhhhhhccCCCCcccc
Confidence            6     889999999999999999765555444433

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=5.6e-50  Score=386.28  Aligned_cols=263  Identities=38%  Similarity=0.705  Sum_probs=221.8

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh-cCCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN-VEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|++..+++.||||++.+......          .....+..|..++.. ++||||+++++++.....
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~   70 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLED----------DDVECTMVERRVLALAWEHPFLTHLFCTFQTKEH   70 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhccCCCCccceeeEEEcCCE
Confidence            469999999999999999999999999976543221          223445567777765 479999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+||||++||+|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        71 ~~lv~e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~  148 (316)
T cd05592          71 LFFVMEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN  148 (316)
T ss_pred             EEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCC
Confidence            99999999999999887654  3499999999999999999999999999999999999999999999999999875421


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      ..                                                        ......+||+.|+|||++.+..
T Consensus       149 ~~--------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~  172 (316)
T cd05592         149 GE--------------------------------------------------------GKASTFCGTPDYIAPEILKGQK  172 (316)
T ss_pred             CC--------------------------------------------------------CccccccCCccccCHHHHcCCC
Confidence            10                                                        1223457999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCCh-HHHhcCCCcC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGV-EEIKGHEFFK  338 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~-~eil~hp~f~  338 (426)
                      ++.++|||||||++|+|++|+.||.+.+..+.+..+....+.. ...+..+.+||.+||..||.+|+++ .+++.||||+
T Consensus       173 ~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~  252 (316)
T cd05592         173 YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFR  252 (316)
T ss_pred             CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccC
Confidence            9999999999999999999999999998888777776544433 3357789999999999999999986 5899999999


Q ss_pred             CCChhhhhhccCCC
Q 014344          339 GVNWELLLKISRPP  352 (426)
Q Consensus       339 ~~~~~~~~~~~~~~  352 (426)
                      .++|..+.+...+|
T Consensus       253 ~~~~~~~~~~~~~~  266 (316)
T cd05592         253 GIDWERLEKREIPP  266 (316)
T ss_pred             CCCHHHHHhCCCCC
Confidence            99999876544443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.8e-50  Score=391.30  Aligned_cols=259  Identities=37%  Similarity=0.668  Sum_probs=222.4

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      +.||+|+||.||+|.+..+++.||+|++.+......          .....+..|+++++.++||||+++++++.....+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~----------~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~   70 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL   70 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEE
Confidence            469999999999999999999999999976543221          2345667899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      |+||||++||+|..++...  ..+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||++.....
T Consensus        71 ~lv~E~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~  148 (325)
T cd05594          71 CFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK  148 (325)
T ss_pred             EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence            9999999999999877654  359999999999999999999997 7999999999999999999999999999864321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (325)
T cd05594         149 D--------------------------------------------------------GATMKTFCGTPEYLAPEVLEDND  172 (325)
T ss_pred             C--------------------------------------------------------CcccccccCCcccCCHHHHccCC
Confidence            1                                                        01122346999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC-----ChHHHhcC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGH  334 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~-----s~~eil~h  334 (426)
                      ++.++|||||||++|+|++|+.||.+.+.......+....... ...++.+.+||.+||++||++|+     ++.++++|
T Consensus       173 ~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         173 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             CCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            9999999999999999999999999888877777665444332 34578899999999999999997     89999999


Q ss_pred             CCcCCCChhhhhhc
Q 014344          335 EFFKGVNWELLLKI  348 (426)
Q Consensus       335 p~f~~~~~~~~~~~  348 (426)
                      |||.++.|......
T Consensus       253 ~~~~~~~~~~~~~~  266 (325)
T cd05594         253 KFFAGIVWQDVYEK  266 (325)
T ss_pred             CCcCCCCHHHHHhC
Confidence            99999999987653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=4.7e-50  Score=386.81  Aligned_cols=259  Identities=37%  Similarity=0.676  Sum_probs=219.6

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||.||+|+++.+++.||+|++.+......          ........|..++..+ +||||+++++++.+++.
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~   70 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLID----------DDVECTMVEKRVLALAWENPFLTHLYCTFQTKEH   70 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhc----------chHHHHHHHHHHHHhccCCCCccCeeEEEEeCCE
Confidence            479999999999999999999999999976543211          1234566688888764 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||.||+|..++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        71 ~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~  148 (316)
T cd05620          71 LFFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF  148 (316)
T ss_pred             EEEEECCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc
Confidence            99999999999999887654  3489999999999999999999999999999999999999999999999999864311


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (316)
T cd05620         149 G--------------------------------------------------------DNRASTFCGTPDYIAPEILQGLK  172 (316)
T ss_pred             C--------------------------------------------------------CCceeccCCCcCccCHHHHcCCC
Confidence            0                                                        01223457999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCCh-HHHhcCCCcC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGV-EEIKGHEFFK  338 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~-~eil~hp~f~  338 (426)
                      ++.++|||||||++|+|++|+.||.+.+..+.+..+....+..+ ..+..+++||.+||..||++|+++ +++++||||+
T Consensus       173 ~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~  252 (316)
T cd05620         173 YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFK  252 (316)
T ss_pred             CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcC
Confidence            99999999999999999999999999888777776654443332 357889999999999999999997 5899999999


Q ss_pred             CCChhhhhhc
Q 014344          339 GVNWELLLKI  348 (426)
Q Consensus       339 ~~~~~~~~~~  348 (426)
                      .++|..+...
T Consensus       253 ~~~~~~~~~~  262 (316)
T cd05620         253 TINWTALEKR  262 (316)
T ss_pred             CCCHHHHHhC
Confidence            9999977543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=6.5e-50  Score=393.99  Aligned_cols=267  Identities=33%  Similarity=0.572  Sum_probs=224.8

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ..+..++|++++.||+|+||.||+|++..+++.||+|++.+......          .....+..|+.+++.++||||++
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~----------~~~~~~~~e~~i~~~~~hp~iv~  107 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR----------SDSAFFWEERDIMAFANSPWVVQ  107 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhh----------HHHHHHHHHHHHHHhCCCCCCCe
Confidence            45677899999999999999999999999999999999976432221          12345778999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++.++..+|+|||||+||+|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+
T Consensus       108 ~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~  184 (371)
T cd05622         108 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLA  184 (371)
T ss_pred             EEEEEEcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEE
Confidence            999999999999999999999999987643   38999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++..+....                                                       .......+||+.|
T Consensus       185 DfG~a~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y  209 (371)
T cd05622         185 DFGTCMKMNKEG-------------------------------------------------------MVRCDTAVGTPDY  209 (371)
T ss_pred             eCCceeEcCcCC-------------------------------------------------------cccccCcccCccc
Confidence            999987653210                                                       0122345799999


Q ss_pred             ccchhhcCCC----CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccC
Q 014344          251 VAPEIIEGKG----HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       251 ~aPE~~~~~~----~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~d  321 (426)
                      +|||++.+..    ++.++|||||||++|+|++|++||.+.+....+.+++...     +.....+..+++||.+||..+
T Consensus       210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~  289 (371)
T cd05622         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR  289 (371)
T ss_pred             cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCCh
Confidence            9999997643    7889999999999999999999999998888888876432     222346788999999999844


Q ss_pred             CCC--CCChHHHhcCCCcCCCChhhh
Q 014344          322 PTK--RIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       322 P~~--R~s~~eil~hp~f~~~~~~~~  345 (426)
                      +.+  |+++++|++||||++..|+..
T Consensus       290 ~~r~~r~~~~ei~~h~~~~~~~~~~~  315 (371)
T cd05622         290 EVRLGRNGVEEIKRHLFFKNDQWAWE  315 (371)
T ss_pred             hhhcCCCCHHHHhcCcccCCCChhHH
Confidence            443  789999999999998666543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=6.4e-50  Score=388.05  Aligned_cols=260  Identities=33%  Similarity=0.671  Sum_probs=216.6

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||.||+|++..+++.||+|++.+......          .....+..|..+++.+ +||||++++++|.++..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~----------~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~   70 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD----------EDIDWVQTEKHVFETASNHPFLVGLHSCFQTESR   70 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCE
Confidence            468999999999999999999999999976543221          2345677899999998 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||+||+|..++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        71 ~~lv~e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~  148 (329)
T cd05588          71 LFFVIEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR  148 (329)
T ss_pred             EEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc
Confidence            99999999999999887654  3599999999999999999999999999999999999999999999999999864211


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (329)
T cd05588         149 P--------------------------------------------------------GDTTSTFCGTPNYIAPEILRGED  172 (329)
T ss_pred             C--------------------------------------------------------CCccccccCCccccCHHHHcCCC
Confidence            0                                                        01223457999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCC---------HHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC---
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSS---------RKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG---  327 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~---------~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s---  327 (426)
                      ++.++|+|||||++|+|++|+.||....         ....+..+....... ...+..+.+||++||+.||.+|+|   
T Consensus       173 ~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~  252 (329)
T cd05588         173 YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHP  252 (329)
T ss_pred             CCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCC
Confidence            9999999999999999999999996321         112233344333322 245788999999999999999997   


Q ss_pred             ---hHHHhcCCCcCCCChhhhhhcc
Q 014344          328 ---VEEIKGHEFFKGVNWELLLKIS  349 (426)
Q Consensus       328 ---~~eil~hp~f~~~~~~~~~~~~  349 (426)
                         ++++++||||..++|..+....
T Consensus       253 ~~~~~~i~~hp~~~~~~~~~~~~~~  277 (329)
T cd05588         253 QTGFRDIKSHPFFRNIDWDLLEQKQ  277 (329)
T ss_pred             CCCHHHHhcCCCCCCCCHHHHHhCC
Confidence               7899999999999999876543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.8e-52  Score=368.04  Aligned_cols=261  Identities=32%  Similarity=0.495  Sum_probs=225.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~   93 (426)
                      ++.|.--+.||.|..++|-.+.++.+|+.+|+|++.-..-...     ............+|+.||+++. ||+|+.+.+
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~-----~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D   90 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTES-----GETPYEMREATRQEISILRQVMGHPYIIDLQD   90 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccC-----CccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence            3567788899999999999999999999999999954321111     1112334566778999999985 999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      +|+++..+++|+|.|+.|.|++++...-  .+++...+.+++|++.|++|||.++||||||||+|||++++.+|||+|||
T Consensus        91 ~yes~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   91 VYESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             eccCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc
Confidence            9999999999999999999999987654  39999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      +|+.+.+                                                         +++.+..||||.|+||
T Consensus       169 Fa~~l~~---------------------------------------------------------GekLrelCGTPgYLAP  191 (411)
T KOG0599|consen  169 FACQLEP---------------------------------------------------------GEKLRELCGTPGYLAP  191 (411)
T ss_pred             eeeccCC---------------------------------------------------------chhHHHhcCCCcccCh
Confidence            9998854                                                         3466778899999999


Q ss_pred             hhhcC------CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCHHHHHHHHHHhccCC
Q 014344          254 EIIEG------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       254 E~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      |.+.+      .+|+..+|+||+|||+|.|+.|.+||-.....-++..|+..     .+.+.+.+...+|||.+||+.||
T Consensus       192 EtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp  271 (411)
T KOG0599|consen  192 ETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDP  271 (411)
T ss_pred             hheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCc
Confidence            99875      46889999999999999999999999877766667777643     35555678889999999999999


Q ss_pred             CCCCChHHHhcCCCcCC
Q 014344          323 TKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~  339 (426)
                      .+|+|++|+|+||||..
T Consensus       272 ~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  272 TKRITAKEALAHPFFIQ  288 (411)
T ss_pred             hhcccHHHHhcChHHHH
Confidence            99999999999999954

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=9.6e-50  Score=385.83  Aligned_cols=266  Identities=32%  Similarity=0.593  Sum_probs=227.3

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVL   95 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~   95 (426)
                      +|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|..++..+. |++|+.+++++
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~i~~~~~~~   70 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQD----------DDVECTMVEKRVLALQDKPPFLTQLHSCF   70 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhccCCCchhheeeEE
Confidence            48899999999999999999999999999999976543221          23456777889998886 57888999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+.+.+|+||||++||+|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        71 ~~~~~~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~  148 (323)
T cd05615          71 QTVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMC  148 (323)
T ss_pred             ecCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccc
Confidence            9999999999999999999987654  34999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ......                                                        .......+||+.|+|||+
T Consensus       149 ~~~~~~--------------------------------------------------------~~~~~~~~gt~~y~aPE~  172 (323)
T cd05615         149 KEHMVD--------------------------------------------------------GVTTRTFCGTPDYIAPEI  172 (323)
T ss_pred             cccCCC--------------------------------------------------------CccccCccCCccccCHHH
Confidence            643211                                                        011234569999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC-----hH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG-----VE  329 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s-----~~  329 (426)
                      +.+..++.++||||+||++|+|++|++||.+.+....+..+....... ...+..+.+|+.+||+++|.+|++     .+
T Consensus       173 ~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~  252 (323)
T cd05615         173 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGER  252 (323)
T ss_pred             HcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHH
Confidence            999999999999999999999999999999998888877776544332 345788999999999999999997     47


Q ss_pred             HHhcCCCcCCCChhhhhhccC
Q 014344          330 EIKGHEFFKGVNWELLLKISR  350 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~~~~~  350 (426)
                      ++++||||+.++|..+.....
T Consensus       253 ~i~~h~~f~~~~~~~~~~~~~  273 (323)
T cd05615         253 DIREHAFFRRIDWDKLENREI  273 (323)
T ss_pred             HHhcCcccCCCCHHHHhcCCC
Confidence            999999999999998866443

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-51  Score=371.76  Aligned_cols=281  Identities=31%  Similarity=0.638  Sum_probs=235.0

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCC
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPL   87 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~   87 (426)
                      ..+.+.+.+|.++++||+|+|++|.+++.+.|.+.||+|+++|+.+...          +...-++.|..+..+. +||+
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~ndd----------edidwvqtek~vfe~asn~pf  312 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDD----------EDIDWVQTEKHVFEQASNNPF  312 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCc----------ccchhHHhhHHHHHhccCCCe
Confidence            3677899999999999999999999999999999999999977654322          3345567788888776 5999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      +|.++.+|+++..+++|.||++||+|.-.+++++.  ++++.+++|..+|+.||.|||+.|||+||||.+|+|++..|++
T Consensus       313 lvglhscfqtesrlffvieyv~ggdlmfhmqrqrk--lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghi  390 (593)
T KOG0695|consen  313 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHI  390 (593)
T ss_pred             EEehhhhhcccceEEEEEEEecCcceeeehhhhhc--CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCce
Confidence            99999999999999999999999999876666543  9999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|+|+++.--                                                        ..+..+.+||||
T Consensus       391 kltdygmcke~l--------------------------------------------------------~~gd~tstfcgt  414 (593)
T KOG0695|consen  391 KLTDYGMCKEGL--------------------------------------------------------GPGDTTSTFCGT  414 (593)
T ss_pred             eecccchhhcCC--------------------------------------------------------CCCcccccccCC
Confidence            999999987421                                                        113356789999


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC-------CH-HHHHHHHhcCCCCC-CCCCHHHHHHHHHHh
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS-------SR-KETFYRILCRPPDL-VGEPTPLRNLIRRLL  318 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-------~~-~~~~~~i~~~~~~~-~~~~~~~~~li~~~L  318 (426)
                      |.|.|||+++|..|++++|||+|||+++||+.|+.||+--       +. .-.++-|+.+.... ...+-.+..+++..|
T Consensus       415 pnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgfl  494 (593)
T KOG0695|consen  415 PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFL  494 (593)
T ss_pred             CcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhh
Confidence            9999999999999999999999999999999999999521       22 23344444333222 233556778999999


Q ss_pred             ccCCCCCCC------hHHHhcCCCcCCCChhhhhhccCCCCCCCC
Q 014344          319 EKDPTKRIG------VEEIKGHEFFKGVNWELLLKISRPPNIPAR  357 (426)
Q Consensus       319 ~~dP~~R~s------~~eil~hp~f~~~~~~~~~~~~~~~~~~~~  357 (426)
                      .+||.+|+.      +.++..|+||+.++|+.+.+....|+..+.
T Consensus       495 nkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~  539 (593)
T KOG0695|consen  495 NKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQ  539 (593)
T ss_pred             cCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCc
Confidence            999999985      789999999999999999876554444333

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.1e-49  Score=384.13  Aligned_cols=260  Identities=35%  Similarity=0.638  Sum_probs=220.1

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh-cCCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN-VEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|++..+++.||||++.+......          ........|..++.. ++||||+++++++.+.+.
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~   70 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMD----------DDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKEN   70 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhc----------chHHHHHHHHHHHHhccCCCcCcceEEEEEeCCE
Confidence            479999999999999999999999999976543211          123455667888876 489999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+||||++||+|..++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        71 ~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~  148 (316)
T cd05619          71 LFFVMEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML  148 (316)
T ss_pred             EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCC
Confidence            99999999999999987654  3489999999999999999999999999999999999999999999999999864321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      ..                                                        ......+||+.|+|||++.+..
T Consensus       149 ~~--------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~  172 (316)
T cd05619         149 GD--------------------------------------------------------AKTCTFCGTPDYIAPEILLGQK  172 (316)
T ss_pred             CC--------------------------------------------------------CceeeecCCccccCHHHHcCCC
Confidence            10                                                        1123456999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCChH-HHhcCCCcC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGVE-EIKGHEFFK  338 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~-eil~hp~f~  338 (426)
                      ++.++||||+||++|+|++|..||.+.+..+.+..+....+.. ...+..+.+||.+||+.||.+|+++. ++++||||+
T Consensus       173 ~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~  252 (316)
T cd05619         173 YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFR  252 (316)
T ss_pred             CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccC
Confidence            9999999999999999999999999988877777665443332 23577899999999999999999996 999999999


Q ss_pred             CCChhhhhhcc
Q 014344          339 GVNWELLLKIS  349 (426)
Q Consensus       339 ~~~~~~~~~~~  349 (426)
                      .++|..+....
T Consensus       253 ~~~~~~~~~~~  263 (316)
T cd05619         253 EIDWSALEERE  263 (316)
T ss_pred             CCCHHHHHhCC
Confidence            99999876543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-49  Score=385.80  Aligned_cols=266  Identities=35%  Similarity=0.615  Sum_probs=223.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||+|++.+......          .....+..|+.++..++||||+.++++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~i~~~~~~~   70 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKR----------AETACFREERDVLVNGDRRWITNLHYAF   70 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hhHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            479999999999999999999999999999999976432221          2345677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .++..+|+||||+.||+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++
T Consensus        71 ~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~  149 (331)
T cd05597          71 QDENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSC  149 (331)
T ss_pred             ecCCeEEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCce
Confidence            99999999999999999999986543 45999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                       .......+||+.|+|||+
T Consensus       150 ~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~  174 (331)
T cd05597         150 LRLLADG-------------------------------------------------------TVQSNVAVGTPDYISPEI  174 (331)
T ss_pred             eecCCCC-------------------------------------------------------CccccceeccccccCHHH
Confidence            7653211                                                       011123469999999999


Q ss_pred             hcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------CCCCCCCHHHHHHHHHHhccCCCC
Q 014344          256 IEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP------PDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       256 ~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.+     ..++.++|||||||++|+|++|+.||.+.+..+.+..+....      +.....+..+++||++||..++.+
T Consensus       175 ~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r  254 (331)
T cd05597         175 LQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETR  254 (331)
T ss_pred             HhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccc
Confidence            974     447889999999999999999999999988877777775322      222345788999999999765444


Q ss_pred             --CCChHHHhcCCCcCCCChhhhhh
Q 014344          325 --RIGVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       325 --R~s~~eil~hp~f~~~~~~~~~~  347 (426)
                        |++++++++||||.+++|.....
T Consensus       255 ~~r~~~~~~l~hp~~~~~~~~~~~~  279 (331)
T cd05597         255 LGRNGLQDFKDHPFFEGIDWDNIRN  279 (331)
T ss_pred             cCCCCHHHHhcCCCCCCCCHHHHhh
Confidence              78999999999999999998754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=8.5e-50  Score=379.93  Aligned_cols=254  Identities=26%  Similarity=0.393  Sum_probs=211.1

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ++++|+++++||.|+||+||+|++..+++.||+|++.....            ......+.+|+.+++.++||||+++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~E~~~l~~l~h~niv~~~~   70 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------------EGAPCTAIREVSLLKNLKHANIVTLHD   70 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc------------CCcchhHHHHHHHHHhCCCCCEeeEEE
Confidence            57889999999999999999999999999999999843211            112245677999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.++...|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        71 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG  148 (288)
T cd07871          71 IIHTERCLTLVFEYLD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFG  148 (288)
T ss_pred             EEcCCCeEEEEEeCCC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCc
Confidence            9999999999999997 58988876543 358899999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        ......+||+.|+||
T Consensus       149 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aP  172 (288)
T cd07871         149 LARAKSVPT--------------------------------------------------------KTYSNEVVTLWYRPP  172 (288)
T ss_pred             ceeeccCCC--------------------------------------------------------ccccCceecccccCh
Confidence            986542110                                                        011223589999999


Q ss_pred             hhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC----------------------------
Q 014344          254 EIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP----------------------------  301 (426)
Q Consensus       254 E~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~----------------------------  301 (426)
                      |++.+ ..++.++||||+||++|+|++|++||.+.+..+....+..   .++                            
T Consensus       173 E~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (288)
T cd07871         173 DVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLIN  252 (288)
T ss_pred             HHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHH
Confidence            99876 5689999999999999999999999998877665544321   000                            


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       302 ~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      .....+.++.+||.+||++||.+|||++|+|+||||
T Consensus       253 ~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         253 HAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            011235678999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.5e-49  Score=383.61  Aligned_cols=260  Identities=36%  Similarity=0.660  Sum_probs=223.1

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|++..+++.||||++.+......          .....+..|..+++.+ +||||+++++++.+.+.
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~   70 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQD----------DDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDR   70 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCE
Confidence            469999999999999999999999999977643222          2345667788999888 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||+|++|..++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        71 ~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  148 (318)
T cd05570          71 LFFVMEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL  148 (318)
T ss_pred             EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCc
Confidence            99999999999999887654  3499999999999999999999999999999999999999999999999999864311


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~g~~~y~aPE~~~~~~  172 (318)
T cd05570         149 G--------------------------------------------------------GVTTSTFCGTPDYIAPEILSYQP  172 (318)
T ss_pred             C--------------------------------------------------------CCcccceecCccccCHHHhcCCC
Confidence            0                                                        01123456999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCCh-----HHHhcC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGV-----EEIKGH  334 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~-----~eil~h  334 (426)
                      ++.++|+|||||++|+|++|+.||.+.+....+..+....... ...+..+.+||++||..||.+||++     .+++.|
T Consensus       173 ~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         173 YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            9999999999999999999999999888877777776544333 2457889999999999999999999     999999


Q ss_pred             CCcCCCChhhhhhcc
Q 014344          335 EFFKGVNWELLLKIS  349 (426)
Q Consensus       335 p~f~~~~~~~~~~~~  349 (426)
                      |||+.++|.......
T Consensus       253 ~~~~~~~~~~~~~~~  267 (318)
T cd05570         253 PFFREIDWDKLERKE  267 (318)
T ss_pred             CCcCCCCHHHHHhCC
Confidence            999999998775543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.1e-49  Score=385.56  Aligned_cols=259  Identities=40%  Similarity=0.706  Sum_probs=220.3

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHH-HHHhcCCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR-VLRNVEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|++..+++.||||++.+......          .....+..|.. +++.++||||+++++++...+.
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~   70 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK----------KEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADK   70 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCE
Confidence            469999999999999999999999999976543222          12234445544 5678999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||+||+|..++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus        71 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~  148 (323)
T cd05575          71 LYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE  148 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc
Confidence            99999999999999887654  4599999999999999999999999999999999999999999999999999864321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (323)
T cd05575         149 H--------------------------------------------------------SKTTSTFCGTPEYLAPEVLRKQP  172 (323)
T ss_pred             C--------------------------------------------------------CCccccccCChhhcChhhhcCCC
Confidence            0                                                        01123456999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCCh----HHHhcCC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGV----EEIKGHE  335 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~----~eil~hp  335 (426)
                      ++.++|||||||++|+|++|..||.+.+..+.+..+...+... ...+..+.+||.+||+.||.+||++    .+++.||
T Consensus       173 ~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~  252 (323)
T cd05575         173 YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHV  252 (323)
T ss_pred             CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCC
Confidence            9999999999999999999999999988888887777554332 3458889999999999999999997    6999999


Q ss_pred             CcCCCChhhhhhc
Q 014344          336 FFKGVNWELLLKI  348 (426)
Q Consensus       336 ~f~~~~~~~~~~~  348 (426)
                      ||+.++|..+...
T Consensus       253 ~~~~~~~~~~~~~  265 (323)
T cd05575         253 FFSSINWDDLVNK  265 (323)
T ss_pred             CcCCCCHHHHhhc
Confidence            9999999887653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.4e-49  Score=386.19  Aligned_cols=266  Identities=42%  Similarity=0.730  Sum_probs=220.5

Q ss_pred             CcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLR   92 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~   92 (426)
                      +|++++.||+|+||+||+|++.   .+++.||+|++.+......         ......+..|+.+++.+. ||+|+.++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~~~~~i~~~~   71 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQK---------AKTVEHTRTERNVLEHVRQSPFLVTLH   71 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhh---------hhHHHHHHHHHHHHHhccCCCCcccEE
Confidence            5899999999999999999874   4789999999976543222         123456778999999995 89999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++|..+..+|+|||||.||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+||
T Consensus        72 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~Df  149 (332)
T cd05614          72 YAFQTEAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDF  149 (332)
T ss_pred             EEEecCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeC
Confidence            9999999999999999999999987654  34999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+....                                                       .......+||+.|+|
T Consensus       150 G~~~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~a  174 (332)
T cd05614         150 GLSKEFLSEE-------------------------------------------------------KERTYSFCGTIEYMA  174 (332)
T ss_pred             cCCccccccC-------------------------------------------------------CCccccccCCccccC
Confidence            9987643211                                                       112234579999999


Q ss_pred             chhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCC-CCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          253 PEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSS----RKETFYRILCRPP-DLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       253 PE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~~~~i~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      ||++.+. .++.++|||||||++|+|++|..||....    .......+....+ .....+..+.+||.+||..||++||
T Consensus       175 PE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~  254 (332)
T cd05614         175 PEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRL  254 (332)
T ss_pred             HHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcC
Confidence            9999875 47889999999999999999999996432    2233334443332 2334578899999999999999999


Q ss_pred             -----ChHHHhcCCCcCCCChhhhhhc
Q 014344          327 -----GVEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       327 -----s~~eil~hp~f~~~~~~~~~~~  348 (426)
                           +++++++||||++.+|..+...
T Consensus       255 ~~~~~~~~~~l~h~~~~~~~~~~~~~~  281 (332)
T cd05614         255 GAGPQGASEIKEHPFFKGLDWEALALR  281 (332)
T ss_pred             CCCCCCHHHHHcCCCcCCCCHHHHHhC
Confidence                 7889999999999999887543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-52  Score=392.30  Aligned_cols=256  Identities=27%  Similarity=0.460  Sum_probs=225.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      -..|..+..||+|+||.||+|.+..+++.||||++..+.            ..+....+++|+.+|.+++++||.++|+.
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~------------~~deIediqqei~~Ls~~~~~~it~yygs   79 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE------------AEDEIEDIQQEISVLSQCDSPNITEYYGS   79 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhh------------cchhhHHHHHHHHHHHhcCcchHHhhhhh
Confidence            345888899999999999999999999999999995543            23456789999999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      |..+..++++||||.||++.++++..  ..+.+..+..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||.
T Consensus        80 yl~g~~LwiiMey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgV  157 (467)
T KOG0201|consen   80 YLKGTKLWIIMEYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGV  157 (467)
T ss_pred             eeecccHHHHHHHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecce
Confidence            99999999999999999999998753  3358999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +..+...                                                        ..+.++|+|||.|||||
T Consensus       158 a~ql~~~--------------------------------------------------------~~rr~tfvGTPfwMAPE  181 (467)
T KOG0201|consen  158 AGQLTNT--------------------------------------------------------VKRRKTFVGTPFWMAPE  181 (467)
T ss_pred             eeeeech--------------------------------------------------------hhccccccccccccchh
Confidence            9887532                                                        23448999999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCC-CCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDLV-GEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      ++.+.+|+.++||||||+++|||++|.+|+....+...+..|-.. ||.+. .+++.+++||..||.+||+.||+|.++|
T Consensus       182 VI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LL  261 (467)
T KOG0201|consen  182 VIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELL  261 (467)
T ss_pred             hhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence            999999999999999999999999999999998886555555443 33333 3567899999999999999999999999


Q ss_pred             cCCCcCCC
Q 014344          333 GHEFFKGV  340 (426)
Q Consensus       333 ~hp~f~~~  340 (426)
                      +|+|++..
T Consensus       262 Kh~FIk~a  269 (467)
T KOG0201|consen  262 KHKFIKRA  269 (467)
T ss_pred             hhHHHHhc
Confidence            99999864

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.2e-49  Score=385.16  Aligned_cols=262  Identities=37%  Similarity=0.676  Sum_probs=223.4

Q ss_pred             EeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           21 VSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      ++.||+|+||.||+|++.   .+++.||+|++.+......         ......+..|+.+|+.++||||++++++|..
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~---------~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~   71 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRN---------QKDTAHTKAERNILEAVKHPFIVDLIYAFQT   71 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhh---------hhhHHHHHHHHHHHHhCCCCchhceeeEEec
Confidence            468999999999999874   5788999999976543221         1123467789999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ++.+|+||||+.|++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.
T Consensus        72 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  149 (323)
T cd05584          72 GGKLYLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKE  149 (323)
T ss_pred             CCeEEEEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence            99999999999999999987654  4588999999999999999999999999999999999999999999999999864


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      ....                                                        .......+||+.|+|||++.
T Consensus       150 ~~~~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~  173 (323)
T cd05584         150 SIHE--------------------------------------------------------GTVTHTFCGTIEYMAPEILM  173 (323)
T ss_pred             cccC--------------------------------------------------------CCcccccCCCccccChhhcc
Confidence            3211                                                        01123456999999999999


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC-----ChHHH
Q 014344          258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI-----GVEEI  331 (426)
Q Consensus       258 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~-----s~~ei  331 (426)
                      +..++.++|||||||++|||++|+.||.+.+....+..+....... ...+..+.+||.+||++||++||     +++++
T Consensus       174 ~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l  253 (323)
T cd05584         174 RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEV  253 (323)
T ss_pred             CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHH
Confidence            9999999999999999999999999999988888777776544332 34578899999999999999999     89999


Q ss_pred             hcCCCcCCCChhhhhhcc
Q 014344          332 KGHEFFKGVNWELLLKIS  349 (426)
Q Consensus       332 l~hp~f~~~~~~~~~~~~  349 (426)
                      +.||||+..+|..+....
T Consensus       254 ~~h~~~~~~~~~~~~~~~  271 (323)
T cd05584         254 QSHPFFRHVNWDDLLARK  271 (323)
T ss_pred             hcCCCcCCCCHHHHhcCC
Confidence            999999999998876543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-49  Score=377.08  Aligned_cols=267  Identities=30%  Similarity=0.476  Sum_probs=224.6

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++.+.||+|+||+||++.+..+++.||+|++.+......          .....+.+|+.+++.++||||+.+++++.
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   70 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------KGEAMALNEKQILEKVNSRFVVSLAYAYE   70 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh----------hhHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            48999999999999999999999999999999965443221          12345677999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ++..+|+|||||.||+|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~  150 (285)
T cd05605          71 TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAV  150 (285)
T ss_pred             CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCce
Confidence            99999999999999999988766555569999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                         .....+||+.|+|||++
T Consensus       151 ~~~~~~---------------------------------------------------------~~~~~~~~~~y~aPE~~  173 (285)
T cd05605         151 EIPEGE---------------------------------------------------------TIRGRVGTVGYMAPEVV  173 (285)
T ss_pred             ecCCCC---------------------------------------------------------ccccccCCCCccCcHHh
Confidence            542110                                                         11234689999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhcCCCC-CCCCCHHHHHHHHHHhccCCCCCC-----
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR----ILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRI-----  326 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~----i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~-----  326 (426)
                      .+..++.++||||+||++|+|++|+.||.+.+.......    +...... ....+..+.+||.+||..||.+||     
T Consensus       174 ~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~  253 (285)
T cd05605         174 KNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGE  253 (285)
T ss_pred             cCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCC
Confidence            998899999999999999999999999988665433222    2222222 224578899999999999999999     


Q ss_pred             ChHHHhcCCCcCCCChhhhhhccC
Q 014344          327 GVEEIKGHEFFKGVNWELLLKISR  350 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~~~~~~~  350 (426)
                      +++++++||||...+|+.+.+...
T Consensus       254 ~~~~l~~~~~~~~~~~~~~~~~~~  277 (285)
T cd05605         254 GAEEVKAHPFFRTANFKRLEAGML  277 (285)
T ss_pred             CHHHHhcCcCccCCCHHHHhhCCC
Confidence            899999999999999998865433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.6e-49  Score=376.61  Aligned_cols=263  Identities=30%  Similarity=0.517  Sum_probs=218.3

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEE
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGY  103 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l  103 (426)
                      ||+|+||+||+|.+..+++.||+|++.+......          .....+..|+++++.++||||+++.++|..+..+|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~l   70 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR----------KGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCL   70 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh----------HHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEE
Confidence            7999999999999999999999999976543221          234567789999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCC
Q 014344          104 AIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK  181 (426)
Q Consensus       104 V~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~  181 (426)
                      ||||++||+|..++...  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++..+...
T Consensus        71 v~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  150 (280)
T cd05608          71 VMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG  150 (280)
T ss_pred             EEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence            99999999998876432  2345899999999999999999999999999999999999999999999999998755321


Q ss_pred             CCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCC
Q 014344          182 TPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH  261 (426)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  261 (426)
                      .                                                        .......||+.|+|||++.+..+
T Consensus       151 ~--------------------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~  174 (280)
T cd05608         151 Q--------------------------------------------------------SKTKGYAGTPGFMAPELLQGEEY  174 (280)
T ss_pred             C--------------------------------------------------------ccccccCCCcCccCHHHhcCCCC
Confidence            1                                                        11223468999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCC-----ChHHH
Q 014344          262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEI  331 (426)
Q Consensus       262 ~~~~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~-----s~~ei  331 (426)
                      +.++|+|||||++|+|++|+.||.....    ......+...+.. ....+..+.+|+.+||+.||++||     +++++
T Consensus       175 ~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~  254 (280)
T cd05608         175 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGL  254 (280)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHH
Confidence            9999999999999999999999986543    2223333333222 234578899999999999999999     78999


Q ss_pred             hcCCCcCCCChhhhhhccCCC
Q 014344          332 KGHEFFKGVNWELLLKISRPP  352 (426)
Q Consensus       332 l~hp~f~~~~~~~~~~~~~~~  352 (426)
                      ++||||++++|..+.....|+
T Consensus       255 l~h~~~~~~~~~~~~~~~~~~  275 (280)
T cd05608         255 RTHPLFRDLNWRQLEAGMLPP  275 (280)
T ss_pred             hcChhhhcCCHhHHhhccCCC
Confidence            999999999999875544443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.6e-49  Score=385.55  Aligned_cols=274  Identities=33%  Similarity=0.594  Sum_probs=228.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||++++..+++.||+|++.+......          .....+..|+.++..++|++|+.+++++
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~i~~l~~~~   70 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKR----------AETACFREERNVLVNGDCQWITTLHYAF   70 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhh----------HHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            479999999999999999999999999999999976432211          2344577899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+++.+|+||||++||+|.+++.... ..+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||++
T Consensus        71 ~~~~~~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a  149 (331)
T cd05624          71 QDENYLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSC  149 (331)
T ss_pred             EcCCEEEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccce
Confidence            99999999999999999999987643 35899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                       .......+||+.|+|||+
T Consensus       150 ~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~  174 (331)
T cd05624         150 LKMNQDG-------------------------------------------------------TVQSSVAVGTPDYISPEI  174 (331)
T ss_pred             eeccCCC-------------------------------------------------------ceeeccccCCcccCCHHH
Confidence            7653211                                                       001123469999999999


Q ss_pred             hcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------CCCCCCCHHHHHHHHHHhccCCCC
Q 014344          256 IEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP------PDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       256 ~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.+     ..++.++|||||||++|+|++|+.||...+..+.+..+....      ......+..+++||.+||..++.+
T Consensus       175 ~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~  254 (331)
T cd05624         175 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERR  254 (331)
T ss_pred             HhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhh
Confidence            876     457889999999999999999999999988888777776432      222345788999999999876654


Q ss_pred             --CCChHHHhcCCCcCCCChhhhhhccCCCCCCC
Q 014344          325 --RIGVEEIKGHEFFKGVNWELLLKISRPPNIPA  356 (426)
Q Consensus       325 --R~s~~eil~hp~f~~~~~~~~~~~~~~~~~~~  356 (426)
                        |++++++++||||++++|+.+... .+|.+|.
T Consensus       255 ~~~~~~~~~~~h~~f~~~~~~~~~~~-~~~~~p~  287 (331)
T cd05624         255 LGQNGIEDFKKHAFFEGIDWENIRNL-EAPYIPD  287 (331)
T ss_pred             cCCCCHHHHhcCCCcCCCCHHHHhhC-CCCccCC
Confidence              468999999999999999988543 3444443

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=6.5e-50  Score=380.16  Aligned_cols=254  Identities=27%  Similarity=0.410  Sum_probs=210.6

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|+++.+++.||+|++.....           .......+.+|+.+++.++||||+++++++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   69 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-----------NEEVKETTLRELKMLRTLKQENIVELKEAF   69 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-----------cccchhhHHHHHHHHHhCCCccccchhhhE
Confidence            469999999999999999999999999999999854321           112345677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..++.+|+||||++++.+..+...  ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++
T Consensus        70 ~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~  147 (287)
T cd07848          70 RRRGKLYLVFEYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFA  147 (287)
T ss_pred             ecCCEEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCc
Confidence            999999999999998877655432  245899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                       .......+||+.|+|||+
T Consensus       148 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~aPE~  172 (287)
T cd07848         148 RNLSEGS-------------------------------------------------------NANYTEYVATRWYRSPEL  172 (287)
T ss_pred             ccccccc-------------------------------------------------------cccccccccccccCCcHH
Confidence            7653211                                                       011223468999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------------CC--------C-----------
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--------------PP--------D-----------  302 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~--------------~~--------~-----------  302 (426)
                      +.+..++.++|||||||++|+|++|++||.+.+..+....+...              .+        .           
T Consensus       173 ~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T cd07848         173 LLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRY  252 (287)
T ss_pred             HcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhh
Confidence            99989999999999999999999999999987765443322110              00        0           


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ....+..+.+||++||++||++|||++++|+||||
T Consensus       253 ~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         253 LGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             hcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            00135678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.9e-49  Score=384.73  Aligned_cols=259  Identities=33%  Similarity=0.679  Sum_probs=214.7

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|++..+++.||+|++.+.....          ......+..|+.++.++ +||||+++++++...+.
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~   70 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND----------DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR   70 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc----------hhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCE
Confidence            46999999999999999999999999997654321          12345677888888876 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||+||+|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        71 ~~lv~E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~  148 (329)
T cd05618          71 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  148 (329)
T ss_pred             EEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC
Confidence            99999999999998877654  3599999999999999999999999999999999999999999999999999864321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (329)
T cd05618         149 P--------------------------------------------------------GDTTSTFCGTPNYIAPEILRGED  172 (329)
T ss_pred             C--------------------------------------------------------CCccccccCCccccCHHHHcCCC
Confidence            0                                                        01123457999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCC---------CHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCCC---
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGS---------SRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRIG---  327 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~---------~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s---  327 (426)
                      ++.++|||||||++|+|++|+.||...         .....+..+...... ....+..+.+||.+||+.||.+|++   
T Consensus       173 ~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~  252 (329)
T cd05618         173 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHP  252 (329)
T ss_pred             CCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCC
Confidence            999999999999999999999999521         112223334333322 2345788999999999999999998   


Q ss_pred             ---hHHHhcCCCcCCCChhhhhhc
Q 014344          328 ---VEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       328 ---~~eil~hp~f~~~~~~~~~~~  348 (426)
                         +.++++||||+.++|+.....
T Consensus       253 ~~~~~~i~~hp~f~~~~~~~~~~~  276 (329)
T cd05618         253 QTGFADIQGHPFFRNVDWDLMEQK  276 (329)
T ss_pred             CCCHHHHhcCCCCCCCCHHHHHcC
Confidence               479999999999999987653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.3e-49  Score=385.22  Aligned_cols=263  Identities=37%  Similarity=0.684  Sum_probs=221.2

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHH-HHHhcCCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR-VLRNVEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|++..+|+.||+|++.+......          .....+..|.. +++.++||||+++++++..++.
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~   70 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNR----------KEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEK   70 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCE
Confidence            469999999999999999999999999976543221          12334455554 5677999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+||||+.||+|..++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus        71 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~  148 (325)
T cd05604          71 LYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA  148 (325)
T ss_pred             EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC
Confidence            99999999999998877653  4599999999999999999999999999999999999999999999999999864321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (325)
T cd05604         149 Q--------------------------------------------------------SDTTTTFCGTPEYLAPEVIRKQP  172 (325)
T ss_pred             C--------------------------------------------------------CCCcccccCChhhCCHHHHcCCC
Confidence            1                                                        01123457999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCCCh----HHHhcCC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRIGV----EEIKGHE  335 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~----~eil~hp  335 (426)
                      ++.++|||||||++|+|++|..||...+..+.+..++..... ..+.+..+.++|++||+.+|.+||++    .+++.||
T Consensus       173 ~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~  252 (325)
T cd05604         173 YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHP  252 (325)
T ss_pred             CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCC
Confidence            999999999999999999999999998888888777654432 23567889999999999999999986    5999999


Q ss_pred             CcCCCChhhhhhccCCC
Q 014344          336 FFKGVNWELLLKISRPP  352 (426)
Q Consensus       336 ~f~~~~~~~~~~~~~~~  352 (426)
                      ||+.++|..+.....++
T Consensus       253 ~f~~~~~~~~~~~~~~~  269 (325)
T cd05604         253 FFESLSWTDLEQKKIPP  269 (325)
T ss_pred             CcCCCCHHHHHhCCCCC
Confidence            99999998876544443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=3.4e-49  Score=383.51  Aligned_cols=266  Identities=33%  Similarity=0.578  Sum_probs=224.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+++++.+++.||+|++.+......          .....+..|+.++..++|++|+.+++++
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~i~~~~~~~   70 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKR----------AETACFREERDVLVNGDNQWITTLHYAF   70 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHh----------hHHHHHHHHHHHHhhCCCCCEeeEEEEE
Confidence            479999999999999999999999999999999966433222          1234577799999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .++..+|+||||++||+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        71 ~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a  149 (332)
T cd05623          71 QDENNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC  149 (332)
T ss_pred             ecCCEEEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchh
Confidence            99999999999999999999987643 35899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                       .......+||+.|+|||+
T Consensus       150 ~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~  174 (332)
T cd05623         150 LKLMEDG-------------------------------------------------------TVQSSVAVGTPDYISPEI  174 (332)
T ss_pred             eecccCC-------------------------------------------------------cceecccccCccccCHHH
Confidence            7543211                                                       011223469999999999


Q ss_pred             hcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------CCCCCCCHHHHHHHHHHhccCCCC
Q 014344          256 IEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP------PDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       256 ~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.+     ..++.++|||||||++|||++|+.||.+.+..+.+.++....      ......+..+++||++||..++.+
T Consensus       175 ~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r  254 (332)
T cd05623         175 LQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHR  254 (332)
T ss_pred             HhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhh
Confidence            863     457889999999999999999999999998888888776432      222346788999999999765554


Q ss_pred             --CCChHHHhcCCCcCCCChhhhhh
Q 014344          325 --RIGVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       325 --R~s~~eil~hp~f~~~~~~~~~~  347 (426)
                        |++++++++||||++++|+.+..
T Consensus       255 ~~r~~~~~~~~h~~f~~~~~~~~~~  279 (332)
T cd05623         255 LGQNGIEDFKQHPFFTGIDWDNIRN  279 (332)
T ss_pred             cCCCCHHHHhCCCCcCCCCHHHHhh
Confidence              68999999999999999998754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=3.4e-49  Score=382.61  Aligned_cols=263  Identities=33%  Similarity=0.665  Sum_probs=218.6

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|++..+++.||+|++.+......          .....+..|+.++.++ .||+|+.+++++.+.+.
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~   70 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDD----------EDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSR   70 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCE
Confidence            479999999999999999999999999976543221          2345678899999888 59999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||+||+|..++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        71 ~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~  148 (327)
T cd05617          71 LFLVIEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG  148 (327)
T ss_pred             EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccC
Confidence            99999999999999887654  3499999999999999999999999999999999999999999999999999864321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (327)
T cd05617         149 P--------------------------------------------------------GDTTSTFCGTPNYIAPEILRGEE  172 (327)
T ss_pred             C--------------------------------------------------------CCceecccCCcccCCHHHHCCCC
Confidence            0                                                        01123457999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC-----
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGS-------SRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG-----  327 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~-------~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s-----  327 (426)
                      ++.++|||||||++|+|++|..||...       .....+..+...+... ...+..+.++|.+||..||.+|++     
T Consensus       173 ~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~  252 (327)
T cd05617         173 YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQT  252 (327)
T ss_pred             CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCC
Confidence            999999999999999999999999532       1223334444433332 245788999999999999999998     


Q ss_pred             -hHHHhcCCCcCCCChhhhhhccCCC
Q 014344          328 -VEEIKGHEFFKGVNWELLLKISRPP  352 (426)
Q Consensus       328 -~~eil~hp~f~~~~~~~~~~~~~~~  352 (426)
                       ++++++||||+.++|+.+.+...++
T Consensus       253 ~~~~i~~h~~f~~~~~~~~~~~~~~~  278 (327)
T cd05617         253 GFSDIKSHTFFRSIDWDLLEKKQVTP  278 (327)
T ss_pred             CHHHHHcCCCCCCCCHHHHHhCCCCC
Confidence             4699999999999999887654443

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.6e-49  Score=379.30  Aligned_cols=258  Identities=23%  Similarity=0.388  Sum_probs=208.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++.....            ......+.+|+.+++.++||||++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~E~~~l~~l~h~niv~~~~~   71 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE------------EGTPFTAIREASLLKGLKHANIVLLHDI   71 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc------------cccchhHHHHHHHHhhCCCCCcCeEEEE
Confidence            4689999999999999999999999999999999853211            1122356679999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.++...|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus        72 ~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  149 (303)
T cd07869          72 IHTKETLTLVFEYVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGL  149 (303)
T ss_pred             EecCCeEEEEEECCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCc
Confidence            999999999999996 67877766543 4589999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        ......+||+.|+|||
T Consensus       150 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE  173 (303)
T cd07869         150 ARAKSVPS--------------------------------------------------------HTYSNEVVTLWYRPPD  173 (303)
T ss_pred             ceeccCCC--------------------------------------------------------ccCCCCcccCCCCChH
Confidence            86432110                                                        0112345899999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHh---cCCC----------------C-----------
Q 014344          255 IIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRIL---CRPP----------------D-----------  302 (426)
Q Consensus       255 ~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~---~~~~----------------~-----------  302 (426)
                      ++.+ ..++.++|||||||++|+|++|..||.+... .+....+.   ..+.                .           
T Consensus       174 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (303)
T cd07869         174 VLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQ  253 (303)
T ss_pred             HHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHH
Confidence            9876 4578999999999999999999999987543 22222221   1100                0           


Q ss_pred             ---CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          303 ---LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       303 ---~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                         ....+..+.+||.+||+.||++|||++|+++||||+.+.+
T Consensus       254 ~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~  296 (303)
T cd07869         254 AWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP  296 (303)
T ss_pred             HhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence               0012356889999999999999999999999999998764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.6e-49  Score=383.10  Aligned_cols=260  Identities=40%  Similarity=0.697  Sum_probs=220.1

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHH-HHHHhcCCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ-RVLRNVEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~il~~l~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||+||+|++..+++.||+|++.+......          .....+..|. .+++.++||||+++++++...+.
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~   70 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK----------KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK   70 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhh----------hHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCe
Confidence            469999999999999999999999999976543222          1122334444 45678999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||.|++|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        71 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~  148 (325)
T cd05602          71 LYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE  148 (325)
T ss_pred             EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccccc
Confidence            99999999999999987654  3488999999999999999999999999999999999999999999999999865321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (325)
T cd05602         149 H--------------------------------------------------------NGTTSTFCGTPEYLAPEVLHKQP  172 (325)
T ss_pred             C--------------------------------------------------------CCCcccccCCccccCHHHHcCCC
Confidence            1                                                        01223457999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCChH----HHhcCC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGVE----EIKGHE  335 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~----eil~hp  335 (426)
                      ++.++|||||||++|+|++|.+||.+.+..+.+..+...+... ...+..+.++|.+||+.||.+|+++.    ++++|+
T Consensus       173 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~  252 (325)
T cd05602         173 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHI  252 (325)
T ss_pred             CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCc
Confidence            9999999999999999999999999988888877776554332 35688899999999999999999875    899999


Q ss_pred             CcCCCChhhhhhcc
Q 014344          336 FFKGVNWELLLKIS  349 (426)
Q Consensus       336 ~f~~~~~~~~~~~~  349 (426)
                      ||...+|+.+....
T Consensus       253 ~~~~~~~~~~~~~~  266 (325)
T cd05602         253 FFSPINWDDLINKK  266 (325)
T ss_pred             ccCCCCHHHHHhCC
Confidence            99999999886533

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=9.2e-51  Score=374.26  Aligned_cols=249  Identities=30%  Similarity=0.527  Sum_probs=211.1

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|+-.+.+|+|+||.||.|....+++.||||.++.+.                 +.-.+|+.||+.++|||||++..+|.
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-----------------r~knrEl~im~~l~HpNIV~L~~~f~   87 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-----------------RYKNRELQIMRKLDHPNIVRLLYFFS   87 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-----------------CcCcHHHHHHHhcCCcCeeeEEEEEE
Confidence            4888999999999999999999999999999986542                 12234999999999999999999885


Q ss_pred             c--C---CeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-CcEE
Q 014344           97 T--D---KFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-GHIM  168 (426)
Q Consensus        97 ~--~---~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-g~ik  168 (426)
                      .  +   -++.+||||++ .+|...++..  .++.++.-.++-|+.||+.||.|||+.||+||||||.|+|+|.+ |.+|
T Consensus        88 ~~~~~d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LK  166 (364)
T KOG0658|consen   88 SSTESDEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLK  166 (364)
T ss_pred             ecCCCchhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEE
Confidence            3  2   26779999997 8888887642  34569999999999999999999999999999999999999976 9999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |||||.|+.+..+.                                                         ...+...|.
T Consensus       167 icDFGSAK~L~~~e---------------------------------------------------------pniSYicSR  189 (364)
T KOG0658|consen  167 ICDFGSAKVLVKGE---------------------------------------------------------PNISYICSR  189 (364)
T ss_pred             eccCCcceeeccCC---------------------------------------------------------CceeEEEec
Confidence            99999999886543                                                         234567889


Q ss_pred             CCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC-----------------C------
Q 014344          249 EYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP-----------------P------  301 (426)
Q Consensus       249 ~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~-----------------~------  301 (426)
                      .|+|||++.| ..|+.++||||.||++.||+-|++.|.|.+...++..|..   .|                 +      
T Consensus       190 yYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~  269 (364)
T KOG0658|consen  190 YYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHP  269 (364)
T ss_pred             cccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccc
Confidence            9999999887 6799999999999999999999999999998887766631   00                 0      


Q ss_pred             ----CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 ----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 ----~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                          .....++++.+|+.++|+++|.+|.++.|++.||||...
T Consensus       270 ~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  270 WHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             ceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence                112346789999999999999999999999999999764

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=6.4e-49  Score=379.75  Aligned_cols=258  Identities=38%  Similarity=0.684  Sum_probs=219.0

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHH-HHHHhcCCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ-RVLRNVEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~il~~l~hp~iv~l~~~~~~~~~  100 (426)
                      +.||+|+||.||+|++..+++.||+|++.+......          .....+..|. .+++.++||||+++++++.+.+.
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~   70 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKK----------KEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEK   70 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHh----------hHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCE
Confidence            469999999999999999999999999976544322          1223444454 46788999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+|||||+|++|...+...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus        71 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  148 (321)
T cd05603          71 LYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE  148 (321)
T ss_pred             EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC
Confidence            99999999999998877643  4589999999999999999999999999999999999999999999999999864311


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .......+||+.|+|||++.+..
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (321)
T cd05603         149 P--------------------------------------------------------EETTSTFCGTPEYLAPEVLRKEP  172 (321)
T ss_pred             C--------------------------------------------------------CCccccccCCcccCCHHHhcCCC
Confidence            0                                                        01123456999999999999999


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCCh----HHHhcCC
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGV----EEIKGHE  335 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~----~eil~hp  335 (426)
                      ++.++|||||||++|+|++|..||.+.+....+..+...+... ...+..+.++|.+||+.||.+|+++    .++++||
T Consensus       173 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~  252 (321)
T cd05603         173 YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHV  252 (321)
T ss_pred             CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCC
Confidence            9999999999999999999999999988888777777655443 3557889999999999999999975    5999999


Q ss_pred             CcCCCChhhhhh
Q 014344          336 FFKGVNWELLLK  347 (426)
Q Consensus       336 ~f~~~~~~~~~~  347 (426)
                      ||..++|..+..
T Consensus       253 ~~~~~~~~~~~~  264 (321)
T cd05603         253 FFSPINWDDLYH  264 (321)
T ss_pred             CcCCCCHHHHhc
Confidence            999999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.1e-50  Score=387.59  Aligned_cols=258  Identities=28%  Similarity=0.448  Sum_probs=233.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|.+++.+|+|+||.+++++++..++.|++|.+.......+           ..+...+|+.+++++.|||||.+.+
T Consensus         2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-----------~r~~A~~E~~lis~~~hP~iv~y~d   70 (426)
T KOG0589|consen    2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-----------ERRSAIQEMDLLSKLLHPNIVEYKD   70 (426)
T ss_pred             ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-----------hhHHHHHHHHHHHhccCCCeeeecc
Confidence            35789999999999999999999999999999999965543332           2346788999999999999999999


Q ss_pred             eeecCCe-EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           94 VLSTDKF-VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        94 ~~~~~~~-~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      .|..++. +||||+||+||+|...+..+.+..|+++.+..|+.|++.||.|||+++|.|||||+.||+++.++.|+|+||
T Consensus        71 s~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDf  150 (426)
T KOG0589|consen   71 SFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDF  150 (426)
T ss_pred             chhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecch
Confidence            9988887 999999999999999999888788999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.+.+..                                                        ....+.+|||.||.
T Consensus       151 GlaK~l~~~~--------------------------------------------------------~~a~tvvGTp~Ymc  174 (426)
T KOG0589|consen  151 GLAKILNPED--------------------------------------------------------SLASTVVGTPYYMC  174 (426)
T ss_pred             hhhhhcCCch--------------------------------------------------------hhhheecCCCcccC
Confidence            9999885421                                                        24556789999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      ||++.+.+|++++|||||||++|||++-+++|.+.+......+|....  |.....+.+++.+|..||..+|+.||++.+
T Consensus       175 PEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~  254 (426)
T KOG0589|consen  175 PEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALE  254 (426)
T ss_pred             HHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHH
Confidence            999999999999999999999999999999999999999888887544  444567899999999999999999999999


Q ss_pred             HhcCCCcC
Q 014344          331 IKGHEFFK  338 (426)
Q Consensus       331 il~hp~f~  338 (426)
                      +|.+|.+.
T Consensus       255 LL~~P~l~  262 (426)
T KOG0589|consen  255 LLRRPHLL  262 (426)
T ss_pred             HhhChhhh
Confidence            99999876

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=6.8e-50  Score=393.20  Aligned_cols=250  Identities=29%  Similarity=0.471  Sum_probs=217.0

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-C-----CCcce
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-H-----PLLPR   90 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h-----p~iv~   90 (426)
                      +|+|++.||+|+||.|.+|.|..|++.||||+++..              ....+....|+.||..|+ |     -|+|+
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~--------------k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vr  252 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK--------------KRFLRQAQIEIRILELLNKHDPDDKYNIVR  252 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC--------------hHHHHHHHHHHHHHHHHhccCCCCCeeEEE
Confidence            699999999999999999999999999999999432              235667778999999997 3     39999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC--cEE
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG--HIM  168 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g--~ik  168 (426)
                      ++++|...+++|||+|.+ +-+|+++++.+....|+...++.++.||+.||.+||++||||+|||||||||.+.+  .||
T Consensus       253 m~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vK  331 (586)
T KOG0667|consen  253 MLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIK  331 (586)
T ss_pred             eeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCcee
Confidence            999999999999999999 59999999998888899999999999999999999999999999999999998654  799


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+|+....                                                           ...+.+-+.
T Consensus       332 VIDFGSSc~~~q-----------------------------------------------------------~vytYiQSR  352 (586)
T KOG0667|consen  332 VIDFGSSCFESQ-----------------------------------------------------------RVYTYIQSR  352 (586)
T ss_pred             EEecccccccCC-----------------------------------------------------------cceeeeecc
Confidence            999999987532                                                           223667888


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC-----------------------
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD-----------------------  302 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~-----------------------  302 (426)
                      .|+|||+|.|.+|+.+.||||||||++||++|.+.|.|.+..+++..|..   .|+.                       
T Consensus       353 fYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~  432 (586)
T KOG0667|consen  353 FYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLC  432 (586)
T ss_pred             ccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeee
Confidence            99999999999999999999999999999999999999999888877630   0000                       


Q ss_pred             --------------------------CC-C-----------CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          303 --------------------------LV-G-----------EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       303 --------------------------~~-~-----------~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                                                .+ +           ....+.|||.+||.+||.+|+|+.++|+||||.+.
T Consensus       433 ~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  433 VETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             eeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence                                      00 0           01227899999999999999999999999999864

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-49  Score=383.82  Aligned_cols=260  Identities=35%  Similarity=0.603  Sum_probs=218.1

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc---CCCCcceeeeeeecCCe
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV---EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l~~~~~~~~~  100 (426)
                      ||+|+||+||+|++..+++.||||++.+......          ........|..++..+   +||||+.++++|.+...
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~   70 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAK----------KEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSD   70 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhh----------hHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCe
Confidence            7999999999999999999999999976543322          1233445567777665   69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|+||||+.||+|..++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        71 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~  148 (330)
T cd05586          71 LYLVTDYMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLT  148 (330)
T ss_pred             EEEEEcCCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCC
Confidence            99999999999999887654  4599999999999999999999999999999999999999999999999999865321


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCC-
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK-  259 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-  259 (426)
                      .                                                        .......+||+.|+|||++.+. 
T Consensus       149 ~--------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~  172 (330)
T cd05586         149 D--------------------------------------------------------NKTTNTFCGTTEYLAPEVLLDEK  172 (330)
T ss_pred             C--------------------------------------------------------CCCccCccCCccccCHHHHcCCC
Confidence            1                                                        1123345799999999998764 


Q ss_pred             CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHhccCCCCCC----ChHHHhc
Q 014344          260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV--GEPTPLRNLIRRLLEKDPTKRI----GVEEIKG  333 (426)
Q Consensus       260 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~----s~~eil~  333 (426)
                      .++.++|||||||++|+|++|+.||.+.+..+.+..+........  ..+..+.+||++||..||.+||    ++.++++
T Consensus       173 ~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         173 GYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             CCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            589999999999999999999999999888887777765433332  3478899999999999999998    6899999


Q ss_pred             CCCcCCCChhhhhhccCC
Q 014344          334 HEFFKGVNWELLLKISRP  351 (426)
Q Consensus       334 hp~f~~~~~~~~~~~~~~  351 (426)
                      ||||+..+|+.+.+....
T Consensus       253 h~~~~~~~~~~~~~~~~~  270 (330)
T cd05586         253 HPFFADIDWDLLSKKQIT  270 (330)
T ss_pred             CccccCCCHHHHHhCCCC
Confidence            999999999987654443

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.2e-49  Score=382.50  Aligned_cols=259  Identities=39%  Similarity=0.749  Sum_probs=222.0

Q ss_pred             EeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           21 VSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      ++.||+|+||.||++++.   .+|+.||+|++.+......           ....+..|+.+|++++||||+++++++.+
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~   69 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVR-----------DRVRTKMERDILAEVNHPFIVKLHYAFQT   69 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhh-----------hHHHHHHHHHHHHhCCCCCcccEEEEEEc
Confidence            467999999999999874   5789999999976543211           23456779999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      +..+|+|||||.|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        70 ~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  147 (318)
T cd05582          70 EGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE  147 (318)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence            99999999999999999887653  4599999999999999999999999999999999999999999999999999875


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      ....                                                        .......+||+.|+|||++.
T Consensus       148 ~~~~--------------------------------------------------------~~~~~~~~g~~~y~aPE~~~  171 (318)
T cd05582         148 SIDH--------------------------------------------------------EKKAYSFCGTVEYMAPEVVN  171 (318)
T ss_pred             cCCC--------------------------------------------------------CCceecccCChhhcCHHHHc
Confidence            4211                                                        01223457999999999999


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC-----hHHH
Q 014344          258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG-----VEEI  331 (426)
Q Consensus       258 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s-----~~ei  331 (426)
                      +..++.++|||||||++|+|++|+.||.+.+..+....+....... ...+..+.+||++||+.||++||+     ++++
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~  251 (318)
T cd05582         172 RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEI  251 (318)
T ss_pred             CCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHH
Confidence            9999999999999999999999999999988888777776544333 245788999999999999999999     6779


Q ss_pred             hcCCCcCCCChhhhhhc
Q 014344          332 KGHEFFKGVNWELLLKI  348 (426)
Q Consensus       332 l~hp~f~~~~~~~~~~~  348 (426)
                      +.||||+.++|..+.+.
T Consensus       252 ~~~~~~~~~~~~~~~~~  268 (318)
T cd05582         252 KRHPFFSTIDWNKLYRR  268 (318)
T ss_pred             hCCCCcCCCCHHHHHhc
Confidence            99999999999987654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.1e-49  Score=365.65  Aligned_cols=258  Identities=29%  Similarity=0.439  Sum_probs=217.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC-cceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-LPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~   93 (426)
                      +..|+.+++||+|+||+||+|+.+.+|+.||+|++..+.-.           ...-....+|+.+|+.|+|+| |+.+++
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-----------EG~P~taiREisllk~L~~~~~iv~L~d   78 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-----------EGVPSTAIREISLLKRLSHANHIVRLHD   78 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-----------cCCCchhhHHHHHHHHhCCCcceEEEEe
Confidence            56788999999999999999999999999999998443211           112345677999999999999 999999


Q ss_pred             eeecCC------eEEEEEeccCCCChHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           94 VLSTDK------FVGYAIDYCPGRDLHSLRKQQSE--QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        94 ~~~~~~------~~~lV~Ey~~gg~L~~l~~~~~~--~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      ++.+++      .+++|+||++ .||..++.....  ..++...++.++.||+.||+|||++||+||||||+||||+.+|
T Consensus        79 v~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G  157 (323)
T KOG0594|consen   79 VIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG  157 (323)
T ss_pred             eeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC
Confidence            998887      8999999996 999999887653  3588899999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||+|+...-.                                                        .+...+-+
T Consensus       158 ~lKlaDFGlAra~~ip--------------------------------------------------------~~~yt~ev  181 (323)
T KOG0594|consen  158 VLKLADFGLARAFSIP--------------------------------------------------------MRTYTPEV  181 (323)
T ss_pred             cEeeeccchHHHhcCC--------------------------------------------------------cccccccE
Confidence            9999999999865311                                                        11234457


Q ss_pred             cCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC--CCCC---------------
Q 014344          246 GTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP--PDLV---------------  304 (426)
Q Consensus       246 gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~--~~~~---------------  304 (426)
                      +|..|+|||++.|. .|+..+||||+|||++||+++++.|.+.+..++..+|..   .|  ..++               
T Consensus       182 vTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~  261 (323)
T KOG0594|consen  182 VTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKW  261 (323)
T ss_pred             EEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCC
Confidence            99999999999886 799999999999999999999999999999888877741   11  0111               


Q ss_pred             -----------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          305 -----------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       305 -----------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                                 .......+++.+||+++|.+|.|++.+|.||||...
T Consensus       262 ~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  262 PGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             CCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence                       001357899999999999999999999999999865

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.1e-48  Score=377.74  Aligned_cols=256  Identities=27%  Similarity=0.423  Sum_probs=215.7

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      |..++|++++.||+|+||.||+|++..++..+|+|++....            .......+.+|+++|+.++||||++++
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~iv~~~   69 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI------------KPAIRNQIIRELQVLHECNSPYIVGFY   69 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc------------CHHHHHHHHHHHHHHHHCCCCCCCeEE
Confidence            56788999999999999999999999999999999985421            112345788899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeeccCCcEEEec
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +++..++.+++||||++|++|.+++....  .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus        70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~D  147 (331)
T cd06649          70 GAFYSDGEISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCD  147 (331)
T ss_pred             EEEEECCEEEEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEcc
Confidence            99999999999999999999999987643  489999999999999999999986 699999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+...                                                          .....+||+.|+
T Consensus       148 fg~~~~~~~~----------------------------------------------------------~~~~~~g~~~y~  169 (331)
T cd06649         148 FGVSGQLIDS----------------------------------------------------------MANSFVGTRSYM  169 (331)
T ss_pred             Cccccccccc----------------------------------------------------------ccccCCCCcCcC
Confidence            9998754211                                                          122346899999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------------------------------
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----------------------------------  296 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i-----------------------------------  296 (426)
                      |||++.+..++.++|||||||++|+|++|+.||...+..+....+                                   
T Consensus       170 aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (331)
T cd06649         170 SPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRP  249 (331)
T ss_pred             CHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccccccccccccc
Confidence            999999999999999999999999999999999876554332111                                   


Q ss_pred             -----------hcC-CCC--CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          297 -----------LCR-PPD--LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       297 -----------~~~-~~~--~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                                 ... .+.  ....+.++++||.+||++||++|||+++|++||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         250 AMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             chhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence                       000 000  11246789999999999999999999999999999754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.9e-48  Score=368.55  Aligned_cols=261  Identities=28%  Similarity=0.474  Sum_probs=216.2

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEE
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGY  103 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l  103 (426)
                      ||+|+||+||+|+++.+|+.||+|++.+......          .....+..|+.+++.++||||+++++++..+..+|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~l   70 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKK----------SGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCL   70 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcc----------hhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEE
Confidence            7999999999999999999999999966443222          122345569999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCC
Q 014344          104 AIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP  183 (426)
Q Consensus       104 V~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~  183 (426)
                      ||||++|++|.+++.......+++..+..++.||+.||+|||+.||+||||||+|||++.++.++|+|||++....... 
T Consensus        71 v~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-  149 (277)
T cd05607          71 VMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-  149 (277)
T ss_pred             EEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-
Confidence            9999999999988766555568999999999999999999999999999999999999999999999999987653210 


Q ss_pred             CCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCCh
Q 014344          184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF  263 (426)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  263 (426)
                                                                              ......||+.|+|||++.+..++.
T Consensus       150 --------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~  173 (277)
T cd05607         150 --------------------------------------------------------TITQRAGTNGYMAPEILKEEPYSY  173 (277)
T ss_pred             --------------------------------------------------------eeeccCCCCCccCHHHHccCCCCC
Confidence                                                                    111235899999999999988999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCC--CCCCCHHHHHHHHHHhccCCCCCCCh----HHHhc
Q 014344          264 AVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPD--LVGEPTPLRNLIRRLLEKDPTKRIGV----EEIKG  333 (426)
Q Consensus       264 ~~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~s~----~eil~  333 (426)
                      ++|+||+||++|+|++|..||.....    .+....+......  ....+.++++||.+||+.||.+||++    ++++.
T Consensus       174 ~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~  253 (277)
T cd05607         174 PVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRK  253 (277)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhc
Confidence            99999999999999999999976533    2233333322211  22457889999999999999999999    67889


Q ss_pred             CCCcCCCChhhhhhccCC
Q 014344          334 HEFFKGVNWELLLKISRP  351 (426)
Q Consensus       334 hp~f~~~~~~~~~~~~~~  351 (426)
                      ||||++++|..+.....+
T Consensus       254 h~~f~~~~~~~~~~~~~~  271 (277)
T cd05607         254 HEFFKTINFPRLEAGLIP  271 (277)
T ss_pred             ChhhcCCCHHHHhcCcCC
Confidence            999999999888654433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-48  Score=372.36  Aligned_cols=295  Identities=48%  Similarity=0.835  Sum_probs=236.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++++.||+|++|+||+|.+..+++.||||.+.+.....          ....+.+..|+.+++.++||||+++++.+
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   70 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK----------RNKVKRVLTEQEILATLDHPFLPTLYASF   70 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccch----------HHHHHHHHHHHHHHHhCCCCCchhheeee
Confidence            36999999999999999999999999999999996543221          12456788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ......|+||||+.|++|.+++.......+++..++.++.||+.||+|||+.|++||||||+||+++.++.++|+|||++
T Consensus        71 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~  150 (316)
T cd05574          71 QTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLS  150 (316)
T ss_pred             ecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchh
Confidence            99999999999999999999987665567999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ...............        .....+...+..                   ............+.++||..|+|||+
T Consensus       151 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~g~~~y~aPE~  203 (316)
T cd05574         151 KQSDVEPPPVSKALR--------KGSRRSSVNSIP-------------------SETFSEEPSFRSNSFVGTEEYIAPEV  203 (316)
T ss_pred             hcccccccccccccc--------cccccccccccc-------------------hhhhcccccCCCCCCcCccCCcCHHH
Confidence            766432211100000        000000000000                   00000011223456789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCHHHHHHHHHHhccCCCCCCC----h
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG---EPTPLRNLIRRLLEKDPTKRIG----V  328 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~li~~~L~~dP~~R~s----~  328 (426)
                      +.+..++.++|||||||++|+|++|..||.+.+....+..+.........   .+..+.++|.+||..||++|||    +
T Consensus       204 ~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~  283 (316)
T cd05574         204 ISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGA  283 (316)
T ss_pred             HcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhH
Confidence            99999999999999999999999999999998888888777654443332   4788999999999999999999    9


Q ss_pred             HHHhcCCCcCCCChhhhhh
Q 014344          329 EEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       329 ~eil~hp~f~~~~~~~~~~  347 (426)
                      +++|+||||++.+|..+.-
T Consensus       284 ~~ll~~~~~~~~~~~~~~~  302 (316)
T cd05574         284 AEIKQHPFFRGVNWALIRH  302 (316)
T ss_pred             HHHHcCchhhcCChhhccc
Confidence            9999999999999998754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.3e-48  Score=379.90  Aligned_cols=259  Identities=27%  Similarity=0.415  Sum_probs=208.7

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|+||.||+|++..+++.||||++.....           .......+.+|+.+|+.++||||+++++++.
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   69 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-----------HVSDATRILREIKLLRLLRHPDIVEIKHIML   69 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-----------cchhHHHHHHHHHHHHhCCCCCEeeecceEe
Confidence            59999999999999999999999999999999853211           1123356788999999999999999999875


Q ss_pred             cC-----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           97 TD-----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        97 ~~-----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ..     ..+|+|||||. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        70 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~D  146 (338)
T cd07859          70 PPSRREFKDIYVVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICD  146 (338)
T ss_pred             ccCCCCCceEEEEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEcc
Confidence            43     35899999995 7898887654  3499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++........                                                     ........+||+.|+
T Consensus       147 fg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~t~~y~  173 (338)
T cd07859         147 FGLARVAFNDTP-----------------------------------------------------TAIFWTDYVATRWYR  173 (338)
T ss_pred             CccccccccccC-----------------------------------------------------ccccccCCCCCCCcC
Confidence            999875421110                                                     001123456999999


Q ss_pred             cchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---------------------------cCC--
Q 014344          252 APEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---------------------------CRP--  300 (426)
Q Consensus       252 aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---------------------------~~~--  300 (426)
                      |||++.+  ..++.++|||||||++|+|++|++||.+.+.......+.                           ...  
T Consensus       174 aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  253 (338)
T cd07859         174 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPV  253 (338)
T ss_pred             CHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCC
Confidence            9999876  678999999999999999999999998776543321110                           000  


Q ss_pred             ---CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          301 ---PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       301 ---~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                         ......++.+.+||.+||+.||++|||++|+++||||+++..
T Consensus       254 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         254 PFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             chHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence               012244677899999999999999999999999999987543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2e-48  Score=385.43  Aligned_cols=251  Identities=26%  Similarity=0.375  Sum_probs=205.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +...+|++++.||+|+||.||+|.+..+++.||||+...                   ..+.+|+.+|+.|+||||++++
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-------------------~~~~~E~~il~~l~HpnIv~~~  149 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-------------------GGTATEAHILRAINHPSIIQLK  149 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-------------------hhhHHHHHHHHhCCCCCCCCEe
Confidence            456789999999999999999999999999999997521                   2356799999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++|......++|||++. ++|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       150 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DF  226 (391)
T PHA03212        150 GTFTYNKFTCLILPRYK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDF  226 (391)
T ss_pred             EEEEECCeeEEEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeC
Confidence            99999999999999995 7888877654  34899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                       .......+||+.|+|
T Consensus       227 G~a~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~a  251 (391)
T PHA03212        227 GAACFPVDIN-------------------------------------------------------ANKYYGWAGTIATNA  251 (391)
T ss_pred             Cccccccccc-------------------------------------------------------ccccccccCccCCCC
Confidence            9986432100                                                       012234579999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHh--------------------------cC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS-------RKETFYRIL--------------------------CR  299 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-------~~~~~~~i~--------------------------~~  299 (426)
                      ||++.+..++.++|||||||++|||++|..||....       ....+..++                          ..
T Consensus       252 PE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  331 (391)
T PHA03212        252 PELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKK  331 (391)
T ss_pred             hhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhc
Confidence            999999999999999999999999999998875321       111111110                          00


Q ss_pred             ----CCC------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          300 ----PPD------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       300 ----~~~------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                          +..      ....+.++.+||.+||++||.+|||++|+|+||||+.+
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        332 SSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             cCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence                000      01234578899999999999999999999999999753

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=2.6e-48  Score=369.20  Aligned_cols=264  Identities=31%  Similarity=0.498  Sum_probs=220.6

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+.+.....          ......+..|+.+++.++|++|+.+++.+.
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~----------~~~~~~~~~E~~il~~l~~~~i~~~~~~~~   70 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------RKGESMALNEKQILEKVNSRFVVSLAYAYE   70 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc----------hHHHHHHHHHHHHHHhCCCCCeeeeeEEEe
Confidence            4889999999999999999999999999999986543211          112345677999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      +...+|+||||+.|++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~  150 (285)
T cd05630          71 TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAV  150 (285)
T ss_pred             cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeecccee
Confidence            99999999999999999998866555569999999999999999999999999999999999999999999999999886


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                         .....+||+.|+|||++
T Consensus       151 ~~~~~~---------------------------------------------------------~~~~~~g~~~y~aPE~~  173 (285)
T cd05630         151 HVPEGQ---------------------------------------------------------TIKGRVGTVGYMAPEVV  173 (285)
T ss_pred             ecCCCc---------------------------------------------------------cccCCCCCccccChHHH
Confidence            542110                                                         11233689999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCC----
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIG----  327 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s----  327 (426)
                      .+..++.++|+||+||++|+|++|+.||......   +........  .......++.+.+||.+||+.||++|||    
T Consensus       174 ~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~  253 (285)
T cd05630         174 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGG  253 (285)
T ss_pred             cCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCC
Confidence            9999999999999999999999999999865422   222222211  1122345788999999999999999999    


Q ss_pred             -hHHHhcCCCcCCCChhhhhh
Q 014344          328 -VEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       328 -~~eil~hp~f~~~~~~~~~~  347 (426)
                       ++|+++||||++++|..+..
T Consensus       254 ~~~~~~~h~~~~~~~~~~~~~  274 (285)
T cd05630         254 GAREVKEHPLFKQINFKRLEA  274 (285)
T ss_pred             chHHHHcChhhhccCHHHHhc
Confidence             89999999999999997755

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2.6e-48  Score=390.44  Aligned_cols=253  Identities=28%  Similarity=0.493  Sum_probs=206.1

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ...+|++++.||+|+||+||+|.+..+++.||||++....                 ....+|+.+|+.++||||+++++
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----------------~~~~~Ei~il~~l~h~niv~l~~  126 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----------------QYKNRELLIMKNLNHINIIFLKD  126 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----------------chHHHHHHHHHhcCCCCCcceee
Confidence            4467999999999999999999999999999999884321                 12345999999999999999998


Q ss_pred             eeecC--------CeEEEEEeccCCCChHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           94 VLSTD--------KFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        94 ~~~~~--------~~~~lV~Ey~~gg~L~~l~~~--~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      +|...        ..+++|||||+ ++|.+++..  .....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus       127 ~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~  205 (440)
T PTZ00036        127 YYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP  205 (440)
T ss_pred             eEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC
Confidence            87432        35789999997 567666543  23456999999999999999999999999999999999999996


Q ss_pred             CC-cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          164 NG-HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       164 ~g-~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                      ++ .+||+|||+|+.+...                                                         ....
T Consensus       206 ~~~~vkL~DFGla~~~~~~---------------------------------------------------------~~~~  228 (440)
T PTZ00036        206 NTHTLKLCDFGSAKNLLAG---------------------------------------------------------QRSV  228 (440)
T ss_pred             CCCceeeeccccchhccCC---------------------------------------------------------CCcc
Confidence            65 7999999999865321                                                         1122


Q ss_pred             ccccCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CC-----------------
Q 014344          243 SFVGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PP-----------------  301 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~-----------------  301 (426)
                      ..+||+.|+|||++.+. .|+.++|||||||++|||++|.+||.+.+..+.+.++...   +.                 
T Consensus       229 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~  308 (440)
T PTZ00036        229 SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFP  308 (440)
T ss_pred             cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCC
Confidence            34689999999998764 6899999999999999999999999998776665554321   00                 


Q ss_pred             C----------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          302 D----------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       302 ~----------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                      .          ....+.++.+||.+||++||.+|||+.|+|+||||+.+.
T Consensus       309 ~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        309 DVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             ccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            0          012467899999999999999999999999999997654

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-48  Score=374.95  Aligned_cols=256  Identities=27%  Similarity=0.411  Sum_probs=217.7

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCce-EEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSES-FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~-vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      +.+.++.....+...||+|+||+||++...  |+. ||+|++........           ..+.+.+|+.+|++++|||
T Consensus        34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~-----------~~~~f~~E~~il~~l~HpN  100 (362)
T KOG0192|consen   34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDE-----------SRKAFRREASLLSRLRHPN  100 (362)
T ss_pred             cceecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChH-----------HHHHHHHHHHHHHhCCCCC
Confidence            456778888899999999999999998864  445 99999965433222           1678999999999999999


Q ss_pred             cceeeeeeecCC-eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCCeeeccCC
Q 014344           88 LPRLRGVLSTDK-FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG-IVYRDLKPENIMIQENG  165 (426)
Q Consensus        88 iv~l~~~~~~~~-~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g-iiHrDlKp~NiLl~~~g  165 (426)
                      ||.++|++.... .+++||||+++|+|..++.......++...+..++.||+.||+|||+++ ||||||||+|||++.++
T Consensus       101 IV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~  180 (362)
T KOG0192|consen  101 IVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG  180 (362)
T ss_pred             eeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC
Confidence            999999998877 7999999999999999988754566999999999999999999999999 99999999999999998


Q ss_pred             -cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          166 -HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       166 -~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                       ++||+|||+++......                                                        ......
T Consensus       181 ~~~KI~DFGlsr~~~~~~--------------------------------------------------------~~~~~~  204 (362)
T KOG0192|consen  181 KTLKIADFGLSREKVISK--------------------------------------------------------TSMTSV  204 (362)
T ss_pred             CEEEECCCccceeecccc--------------------------------------------------------ccccCC
Confidence             99999999998764211                                                        111224


Q ss_pred             ccCCCCccchhhc--CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHhc
Q 014344          245 VGTEEYVAPEIIE--GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       245 ~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~li~~~L~  319 (426)
                      .||+.|||||++.  +..|+.++||||||+++|||+||+.||.+.........+..   +++....+++.+..||.+||.
T Consensus       205 ~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~  284 (362)
T KOG0192|consen  205 AGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWL  284 (362)
T ss_pred             CCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCC
Confidence            6999999999999  66999999999999999999999999999988666555542   233333478999999999999


Q ss_pred             cCCCCCCChHHHhc
Q 014344          320 KDPTKRIGVEEIKG  333 (426)
Q Consensus       320 ~dP~~R~s~~eil~  333 (426)
                      .||..||++.+|+.
T Consensus       285 ~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  285 VDPSRRPSFLEIVS  298 (362)
T ss_pred             CCCCcCCCHHHHHH
Confidence            99999999998864

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=7.4e-48  Score=366.58  Aligned_cols=253  Identities=30%  Similarity=0.407  Sum_probs=206.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcC-CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc---CCCCccee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVE-SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV---EHPLLPRL   91 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l   91 (426)
                      .+|++++.||+|+||+||+|++.. +++.||+|++......           ......+.+|+.+++.+   +||||+++
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~hpniv~~   69 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-----------EGMPLSTIREVAVLRHLETFEHPNVVRL   69 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-----------CCchHHHHHHHHHHHhhcccCCCCcceE
Confidence            369999999999999999999864 5688999988543211           11223445677777665   69999999


Q ss_pred             eeeee-----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           92 RGVLS-----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        92 ~~~~~-----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ++++.     ....+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus        70 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~  148 (290)
T cd07862          70 FDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ  148 (290)
T ss_pred             EEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCC
Confidence            99885     3457999999996 68998887665556899999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++......                                                         .......|
T Consensus       149 ~kl~Dfg~~~~~~~~---------------------------------------------------------~~~~~~~~  171 (290)
T cd07862         149 IKLADFGLARIYSFQ---------------------------------------------------------MALTSVVV  171 (290)
T ss_pred             EEEccccceEeccCC---------------------------------------------------------cccccccc
Confidence            999999998754211                                                         11223468


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CC-------------------
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PD-------------------  302 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~-------------------  302 (426)
                      |+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+....     ..                   
T Consensus       172 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (290)
T cd07862         172 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQP  251 (290)
T ss_pred             cccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCC
Confidence            999999999999899999999999999999999999999988777666554210     00                   


Q ss_pred             ----CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          303 ----LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       303 ----~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                          ....+..+.+||.+||+.||++|||+.|+|+||||
T Consensus       252 ~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         252 IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                01345678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=3e-47  Score=361.89  Aligned_cols=265  Identities=29%  Similarity=0.472  Sum_probs=222.7

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++.+.||+|+||+||+|.+..+++.||+|++.+......          .....+..|+.+|+.++|++|+.+++++.
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~il~~l~~~~i~~~~~~~~   70 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKR----------KGESMALNEKQILEKVNSQFVVNLAYAYE   70 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhh----------hHHHHHHHHHHHHHHcCCcCceeEEEEEe
Confidence            48899999999999999999999999999999865433221          12345677999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .++..|+||||+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~  150 (285)
T cd05632          71 TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAV  150 (285)
T ss_pred             cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcce
Confidence            99999999999999999988766554569999999999999999999999999999999999999999999999999886


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                         ......|++.|+|||++
T Consensus       151 ~~~~~~---------------------------------------------------------~~~~~~g~~~~~aPE~~  173 (285)
T cd05632         151 KIPEGE---------------------------------------------------------SIRGRVGTVGYMAPEVL  173 (285)
T ss_pred             ecCCCC---------------------------------------------------------cccCCCCCcCccChHHh
Confidence            542110                                                         11233589999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----hcCC-CCCCCCCHHHHHHHHHHhccCCCCCCC----
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI----LCRP-PDLVGEPTPLRNLIRRLLEKDPTKRIG----  327 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i----~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~s----  327 (426)
                      .+..++.++|+|||||++|+|++|..||.+.........+    .... ......+..+.+|+.+||+.||++||+    
T Consensus       174 ~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~  253 (285)
T cd05632         174 NNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEE  253 (285)
T ss_pred             cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCccc
Confidence            9989999999999999999999999999887654433222    2211 222345778999999999999999999    


Q ss_pred             -hHHHhcCCCcCCCChhhhhhc
Q 014344          328 -VEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       328 -~~eil~hp~f~~~~~~~~~~~  348 (426)
                       +.+++.|+||+..+|+.+...
T Consensus       254 ~~~~l~~~~~~~~~~~~~~~~~  275 (285)
T cd05632         254 GAGEVKRHPFFRNMNFKRLEAG  275 (285)
T ss_pred             ChHHHHcChhhhcCCHHHHhcC
Confidence             889999999999999986543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-49  Score=382.64  Aligned_cols=250  Identities=27%  Similarity=0.432  Sum_probs=224.2

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |.-++.||+|+||.||.|++..+.+.||||.+.-+          .......+..+..|+++|+++.|||++.+-++|..
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsyS----------GKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr   97 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS----------GKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR   97 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeecccc----------ccccHHHHHHHHHHHHHHHhccCCCcccccceeec
Confidence            77789999999999999999999999999998432          23345678999999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      +...|||||||- |+-.+++.-.. +++.+-.+..|+.+.+.||.|||+++.||||||..|||+++.|.|||+|||.|..
T Consensus        98 e~TaWLVMEYCl-GSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi  175 (948)
T KOG0577|consen   98 EHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASI  175 (948)
T ss_pred             cchHHHHHHHHh-ccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhh
Confidence            999999999996 77778777654 5699999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      ..                                                            -.++|+|||.|||||+|.
T Consensus       176 ~~------------------------------------------------------------PAnsFvGTPywMAPEVIL  195 (948)
T KOG0577|consen  176 MA------------------------------------------------------------PANSFVGTPYWMAPEVIL  195 (948)
T ss_pred             cC------------------------------------------------------------chhcccCCccccchhHhe
Confidence            53                                                            257899999999999986


Q ss_pred             C---CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC---CCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          258 G---KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV---GEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       258 ~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      .   +.|+-++||||||+++.||.-.++|+...+....++.|....+..+   .++..+++|+..||++-|.+|||.+++
T Consensus       196 AMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~l  275 (948)
T KOG0577|consen  196 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEEL  275 (948)
T ss_pred             eccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHH
Confidence            4   5689999999999999999999999999999999999986654433   457789999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      |.|+|...
T Consensus       276 l~H~fv~R  283 (948)
T KOG0577|consen  276 LKHRFVLR  283 (948)
T ss_pred             hhcchhcc
Confidence            99999853

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.4e-47  Score=376.07  Aligned_cols=253  Identities=25%  Similarity=0.433  Sum_probs=206.1

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      -..+|++++.||+|+||.||+|.+..+++.||+|++.+...           ......++.+|+.+++.++||||+++++
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~niv~~~~   87 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-----------NQTHAKRAYRELVLLKCVNHKNIISLLN   87 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-----------chhHHHHHHHHHHHHHhCCCCCEeeeee
Confidence            35789999999999999999999999999999999854321           1123456778999999999999999999


Q ss_pred             eeecCC------eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           94 VLSTDK------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        94 ~~~~~~------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      +|....      .+|+||||+.+ +|...+.    ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+
T Consensus        88 ~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~  162 (359)
T cd07876          88 VFTPQKSLEEFQDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL  162 (359)
T ss_pred             eeccCCCccccceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCE
Confidence            986543      57999999974 5655543    238899999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++......                                                         ......+||
T Consensus       163 kl~Dfg~a~~~~~~---------------------------------------------------------~~~~~~~~t  185 (359)
T cd07876         163 KILDFGLARTACTN---------------------------------------------------------FMMTPYVVT  185 (359)
T ss_pred             EEecCCCccccccC---------------------------------------------------------ccCCCCccc
Confidence            99999998654211                                                         012234689


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----------------------CCCCC--
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC----------------------RPPDL--  303 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~----------------------~~~~~--  303 (426)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+..                      ..+..  
T Consensus       186 ~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (359)
T cd07876         186 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPG  265 (359)
T ss_pred             CCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCC
Confidence            999999999999999999999999999999999999988765443322210                      00000  


Q ss_pred             -------------------CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          304 -------------------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       304 -------------------~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                         ...+..+++||.+||+.||++|||+.|+|+||||..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         266 ISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             cchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                               012456899999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-49  Score=383.89  Aligned_cols=255  Identities=27%  Similarity=0.461  Sum_probs=225.0

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|+|+..||-|+||.||+|..+.++-..|-|++.-             .....+..+.-|+.||..++||+||+|++.|.
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet-------------kseEELEDylVEIeILa~CdHP~ivkLl~ayy   99 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET-------------KSEEELEDYLVEIEILAECDHPVIVKLLSAYY   99 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc-------------cchhHHhhhhhhhhhhhcCCChHHHHHHHHHh
Confidence            48999999999999999999999988889998822             23346778888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      -++.+++.+|||.||-...++-... ..+++.+++.+++|++.||.|||+++|||||||..|||++.+|.|+|+|||.+.
T Consensus       100 ~enkLwiliEFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSA  178 (1187)
T KOG0579|consen  100 FENKLWILIEFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSA  178 (1187)
T ss_pred             ccCceEEEEeecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccc
Confidence            9999999999999999988765554 569999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ....                                                        ...+..+|+|||.|||||+.
T Consensus       179 Kn~~--------------------------------------------------------t~qkRDsFIGTPYWMAPEVv  202 (1187)
T KOG0579|consen  179 KNKS--------------------------------------------------------TRQKRDSFIGTPYWMAPEVV  202 (1187)
T ss_pred             cchh--------------------------------------------------------HHhhhccccCCcccccchhe
Confidence            5431                                                        12356788999999999997


Q ss_pred             cC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCC---CCCHHHHHHHHHHhccCCCCCCC
Q 014344          257 EG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-DLV---GEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       257 ~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~---~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      .+     .+|++++||||||++|.||.-+.+|-...++...+.+|....| .+.   .++..+.||+.+||.+||..||+
T Consensus       203 mCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~  282 (1187)
T KOG0579|consen  203 MCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP  282 (1187)
T ss_pred             eeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCC
Confidence            64     6799999999999999999999999999999998888875544 333   34678999999999999999999


Q ss_pred             hHHHhcCCCcCCCC
Q 014344          328 VEEIKGHEFFKGVN  341 (426)
Q Consensus       328 ~~eil~hp~f~~~~  341 (426)
                      +.+||+||||+.+.
T Consensus       283 aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  283 AAQLLKHPFVQNAP  296 (1187)
T ss_pred             HHHHhhCcccccCC
Confidence            99999999998654

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.5e-47  Score=364.04  Aligned_cols=252  Identities=29%  Similarity=0.397  Sum_probs=205.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc---CCCCcceeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV---EHPLLPRLRG   93 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l~~   93 (426)
                      +|++++.||+|+||+||+|+++.+++.||+|++......           ......+..|+.+++.+   +||||+++++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~   69 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-----------DGLPLSTVREVALLKRLEAFDHPNIVRLMD   69 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-----------CCCchHHHHHHHHHHHhhhcCCCCeeeeee
Confidence            599999999999999999999999999999998542110           11122345566666655   7999999999


Q ss_pred             eeec-----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           94 VLST-----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        94 ~~~~-----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++..     ...+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        70 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~k  148 (288)
T cd07863          70 VCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVK  148 (288)
T ss_pred             eeccccCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence            8864     346899999997 5888887765555699999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++.......                                                         ......||+
T Consensus       149 l~dfg~~~~~~~~~---------------------------------------------------------~~~~~~~~~  171 (288)
T cd07863         149 LADFGLARIYSCQM---------------------------------------------------------ALTPVVVTL  171 (288)
T ss_pred             ECccCccccccCcc---------------------------------------------------------cCCCccccc
Confidence            99999987543110                                                         112235899


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CC------------------------
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PP------------------------  301 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~------------------------  301 (426)
                      .|+|||++.+..++.++|||||||++|+|++|++||.+......+.++...   +.                        
T Consensus       172 ~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (288)
T cd07863         172 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQ  251 (288)
T ss_pred             cccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchH
Confidence            999999999999999999999999999999999999888776655444310   00                        


Q ss_pred             -CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          302 -DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       302 -~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                       .....+..+.+||.+||++||.+|||+.+++.||||
T Consensus       252 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         252 SVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             HhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence             011345668999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.1e-46  Score=358.90  Aligned_cols=263  Identities=38%  Similarity=0.682  Sum_probs=228.6

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.+......          .....+..|+++|++++||||+++++++
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   70 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKL----------KQVEHVLNEKRILQSIRHPFLVNLYGSF   70 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhCCCCCccceeeEE
Confidence            469999999999999999999999999999999866543221          2346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .....+|+||||+++++|.+++...  ..+++..+..++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++
T Consensus        71 ~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~  148 (290)
T cd05580          71 QDDSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFA  148 (290)
T ss_pred             EcCCeEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCc
Confidence            9999999999999999999988765  45999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ......                                                           ....+|++.|+|||.
T Consensus       149 ~~~~~~-----------------------------------------------------------~~~~~~~~~y~aPE~  169 (290)
T cd05580         149 KRVKGR-----------------------------------------------------------TYTLCGTPEYLAPEI  169 (290)
T ss_pred             cccCCC-----------------------------------------------------------CCCCCCCccccChhh
Confidence            765311                                                           123358899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCC-----ChH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRI-----GVE  329 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~-----s~~  329 (426)
                      +.+..++.++|+||||+++|+|++|..||...+.......+...... ....+..++++|.+||+.||.+|+     +++
T Consensus       170 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~  249 (290)
T cd05580         170 ILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVN  249 (290)
T ss_pred             hcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHH
Confidence            98888899999999999999999999999988877666666544332 234578899999999999999999     899


Q ss_pred             HHhcCCCcCCCChhhhhhcc
Q 014344          330 EIKGHEFFKGVNWELLLKIS  349 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~~~~  349 (426)
                      |+++||||+.++|..+....
T Consensus       250 ~l~~~~~~~~~~~~~~~~~~  269 (290)
T cd05580         250 DIKNHPWFAGIDWIALLQRK  269 (290)
T ss_pred             HHHcCcccccCCHHHHhhcc
Confidence            99999999999999886533

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=3.8e-47  Score=365.32  Aligned_cols=258  Identities=25%  Similarity=0.393  Sum_probs=211.1

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      .++++|++++.||+|+||+||+|++..+++.||+|++.....            ......+.+|+.+++.++||||++++
T Consensus         3 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~E~~~l~~l~h~~iv~~~   70 (309)
T cd07872           3 GKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------------EGAPCTAIREVSLLKDLKHANIVTLH   70 (309)
T ss_pred             CCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc------------CCcchhHHHHHHHHHhCCCCCcceEE
Confidence            356889999999999999999999999999999999854321            11223466799999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++..++..|+||||+. ++|.+++.... ..++...++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        71 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Df  148 (309)
T cd07872          71 DIVHTDKSLTLVFEYLD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADF  148 (309)
T ss_pred             EEEeeCCeEEEEEeCCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcc
Confidence            99999999999999997 57877765543 44899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                        ......++|+.|+|
T Consensus       149 g~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~a  172 (309)
T cd07872         149 GLARAKSVPT--------------------------------------------------------KTYSNEVVTLWYRP  172 (309)
T ss_pred             ccceecCCCc--------------------------------------------------------cccccccccccccC
Confidence            9986542110                                                        01122357899999


Q ss_pred             chhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC--------------------C-------
Q 014344          253 PEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP--------------------P-------  301 (426)
Q Consensus       253 PE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~--------------------~-------  301 (426)
                      ||++.+ ..++.++|||||||++|+|++|++||.+.+..+....+..   .+                    .       
T Consensus       173 PE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (309)
T cd07872         173 PDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLI  252 (309)
T ss_pred             CHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchh
Confidence            999876 4578999999999999999999999988776544333321   00                    0       


Q ss_pred             -CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 -DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 -~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                       .....+..+++||.+||+.||.+|||++|++.||||+..
T Consensus       253 ~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         253 NHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             hhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence             011346678999999999999999999999999999764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=3.8e-47  Score=373.73  Aligned_cols=253  Identities=25%  Similarity=0.428  Sum_probs=208.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      -.++|++++.||+|+||.||+|.+..+++.||||++.+..           ........+.+|+.+++.++||||+.+++
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~~ii~~~~   90 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-----------QNQTHAKRAYRELVLMKCVNHKNIIGLLN   90 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-----------cCchhHHHHHHHHHHHHhcCCCCccccce
Confidence            3578999999999999999999999999999999985422           11223456778999999999999999999


Q ss_pred             eeecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           94 VLSTD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        94 ~~~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ++...      ..+|+||||+. ++|..++..    .++...+..++.|++.||+|||++||+||||||+|||++.++.+
T Consensus        91 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~  165 (364)
T cd07875          91 VFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL  165 (364)
T ss_pred             eecccccccccCeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcE
Confidence            88543      35799999997 566666542    38899999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++......                                                         ......+||
T Consensus       166 kL~DfG~a~~~~~~---------------------------------------------------------~~~~~~~~t  188 (364)
T cd07875         166 KILDFGLARTAGTS---------------------------------------------------------FMMTPYVVT  188 (364)
T ss_pred             EEEeCCCccccCCC---------------------------------------------------------CcccCCccc
Confidence            99999998754211                                                         012234689


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC----------------------CCC--
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP----------------------PDL--  303 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~----------------------~~~--  303 (426)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..++...                      +..  
T Consensus       189 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (364)
T cd07875         189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG  268 (364)
T ss_pred             CCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCC
Confidence            99999999999999999999999999999999999999887766555443210                      000  


Q ss_pred             -------------------CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          304 -------------------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       304 -------------------~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                         ...+..+++||.+||+.||.+|||++++|+||||..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             CChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                               011346889999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=4.1e-47  Score=368.97  Aligned_cols=256  Identities=29%  Similarity=0.451  Sum_probs=213.5

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +..++|+++++||.|+||.||+|.+..++..+|+|++....            .......+.+|+++|+.++||||++++
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~iv~~~   69 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI------------KPAIRNQIIRELQVLHECNSPYIVGFY   69 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc------------CHHHHHHHHHHHHHHHHCCCCccccee
Confidence            56688999999999999999999999999999999884421            112345688899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeeccCCcEEEec
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++|.+++.+|+||||++|++|.+++...  +.+++..+..++.|++.||.|||+. +|+||||||+|||++.+|.+||+|
T Consensus        70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~D  147 (333)
T cd06650          70 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD  147 (333)
T ss_pred             EEEEECCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEee
Confidence            9999999999999999999999988754  3489999999999999999999985 799999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+...                                                          .....+||+.|+
T Consensus       148 fg~~~~~~~~----------------------------------------------------------~~~~~~~~~~y~  169 (333)
T cd06650         148 FGVSGQLIDS----------------------------------------------------------MANSFVGTRSYM  169 (333)
T ss_pred             CCcchhhhhh----------------------------------------------------------ccccCCCCcccc
Confidence            9998654211                                                          112346899999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------------------------------------
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR------------------------------------  295 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~------------------------------------  295 (426)
                      |||++.+..++.++|+|||||++|+|++|+.||...........                                    
T Consensus       170 aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (333)
T cd06650         170 SPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPM  249 (333)
T ss_pred             CHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccc
Confidence            99999998999999999999999999999999986654332111                                    


Q ss_pred             --------HhcCC-CCC--CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          296 --------ILCRP-PDL--VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       296 --------i~~~~-~~~--~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                              +.... +..  ...+.++++||.+||++||++|||+.|++.||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         250 AIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             cHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence                    11111 111  1235678999999999999999999999999999753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.4e-47  Score=375.27  Aligned_cols=256  Identities=27%  Similarity=0.454  Sum_probs=209.1

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ....+++|++++.||+|+||.||+|++..+++.||||++....            .......+.+|+.+|+.++|+||++
T Consensus        69 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~iv~  136 (353)
T PLN00034         69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH------------EDTVRRQICREIEILRDVNHPNVVK  136 (353)
T ss_pred             CCCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC------------cHHHHHHHHHHHHHHHhCCCCCcce
Confidence            4456788999999999999999999999999999999984321            1123457888999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++...+.+|+|||||++++|...      ...++..+..++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus       137 ~~~~~~~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~  210 (353)
T PLN00034        137 CHDMFDHNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIA  210 (353)
T ss_pred             eeeEeccCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEc
Confidence            99999999999999999999998643      236678888999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++..+....                                                        ......+||+.|
T Consensus       211 DfG~~~~~~~~~--------------------------------------------------------~~~~~~~gt~~y  234 (353)
T PLN00034        211 DFGVSRILAQTM--------------------------------------------------------DPCNSSVGTIAY  234 (353)
T ss_pred             ccccceeccccc--------------------------------------------------------ccccccccCccc
Confidence            999987653210                                                        112334699999


Q ss_pred             ccchhhcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhc--CCCCCCCCCHHHHHHHHHHhcc
Q 014344          251 VAPEIIEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILC--RPPDLVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       251 ~aPE~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~  320 (426)
                      +|||++..     ...+.++|||||||++|||++|+.||......   .....+..  .+......+..+++||.+||..
T Consensus       235 ~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  314 (353)
T PLN00034        235 MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQR  314 (353)
T ss_pred             cCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccC
Confidence            99998753     23457899999999999999999999743322   12222211  1222335678899999999999


Q ss_pred             CCCCCCChHHHhcCCCcCCC
Q 014344          321 DPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       321 dP~~R~s~~eil~hp~f~~~  340 (426)
                      ||++|||+.||++||||.+.
T Consensus       315 ~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        315 EPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             ChhhCcCHHHHhcCcccccC
Confidence            99999999999999999763

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=5e-47  Score=385.84  Aligned_cols=266  Identities=26%  Similarity=0.379  Sum_probs=223.8

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ......++|++.+.||+|+||+||+|++..+++.||||++.....           .......+..|+.+|..++|+||+
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-----------~~~~~~~~~~Ei~~l~~~~h~~iv   94 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-----------SEADKNRAQAEVCCLLNCDFFSIV   94 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-----------CHHHHHHHHHHHHHHhcCCCCcEE
Confidence            334556799999999999999999999999999999999855322           122345678899999999999999


Q ss_pred             eeeeeeecCC--------eEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCe
Q 014344           90 RLRGVLSTDK--------FVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENI  159 (426)
Q Consensus        90 ~l~~~~~~~~--------~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~Ni  159 (426)
                      ++++.+....        .+++||||+++|+|.+++...  ....+++..+..++.|++.||+|||++||+||||||+||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NI  174 (496)
T PTZ00283         95 KCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANI  174 (496)
T ss_pred             EeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHE
Confidence            9998875432        478999999999999987643  234699999999999999999999999999999999999


Q ss_pred             eeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          160 MIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE  239 (426)
Q Consensus       160 Ll~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (426)
                      |++.++.+||+|||+++.+.....                                                      ..
T Consensus       175 Ll~~~~~vkL~DFGls~~~~~~~~------------------------------------------------------~~  200 (496)
T PTZ00283        175 LLCSNGLVKLGDFGFSKMYAATVS------------------------------------------------------DD  200 (496)
T ss_pred             EEeCCCCEEEEecccCeecccccc------------------------------------------------------cc
Confidence            999999999999999876532110                                                      11


Q ss_pred             CccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHH
Q 014344          240 KSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRL  317 (426)
Q Consensus       240 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~  317 (426)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..++...  +.....++.+.+||.+|
T Consensus       201 ~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  280 (496)
T PTZ00283        201 VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTAL  280 (496)
T ss_pred             ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            2234579999999999999999999999999999999999999999988877777766432  23345688999999999


Q ss_pred             hccCCCCCCChHHHhcCCCcCCC
Q 014344          318 LEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       318 L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      |..||.+||++.++++|||++..
T Consensus       281 L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        281 LSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             cccChhhCcCHHHHHhCHHHHHh
Confidence            99999999999999999998753

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-50  Score=359.59  Aligned_cols=252  Identities=26%  Similarity=0.441  Sum_probs=225.4

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      -|.|+.+||.|+||.||+|.++.+|+.+|||.+.-+               ..++++..|+.||++++.|++|++|+.+.
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~---------------sDLQEIIKEISIMQQC~S~yVVKYYGSYF   98 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD---------------TDLQEIIKEISIMQQCKSKYVVKYYGSYF   98 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc---------------chHHHHHHHHHHHHHcCCchhhhhhhhhc
Confidence            378999999999999999999999999999987322               35678889999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ....+|+|||||..|+..++++.+ ++++++.++..+++..+.||+|||...-||||||..|||++.+|+.||+|||.+.
T Consensus        99 K~sDLWIVMEYCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAG  177 (502)
T KOG0574|consen   99 KHSDLWIVMEYCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAG  177 (502)
T ss_pred             cCCceEeehhhcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccc
Confidence            999999999999999999987654 4679999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+...                                                        ..+.++.+|||.|||||++
T Consensus       178 QLTDT--------------------------------------------------------MAKRNTVIGTPFWMAPEVI  201 (502)
T KOG0574|consen  178 QLTDT--------------------------------------------------------MAKRNTVIGTPFWMAPEVI  201 (502)
T ss_pred             hhhhh--------------------------------------------------------HHhhCccccCcccccHHHH
Confidence            87532                                                        3467788999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV----GEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      ..-+|+..+||||||++..||..|++||..-.+.....-|-..||...    .++.++.|||++||.+.|++|.|+-+++
T Consensus       202 ~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~  281 (502)
T KOG0574|consen  202 EEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLC  281 (502)
T ss_pred             HHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHh
Confidence            999999999999999999999999999998887766555555554332    3467899999999999999999999999


Q ss_pred             cCCCcCCC
Q 014344          333 GHEFFKGV  340 (426)
Q Consensus       333 ~hp~f~~~  340 (426)
                      +|||.+..
T Consensus       282 ~H~FiknA  289 (502)
T KOG0574|consen  282 EHTFIKNA  289 (502)
T ss_pred             hhhhhcCC
Confidence            99999864

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4.6e-47  Score=374.23  Aligned_cols=257  Identities=27%  Similarity=0.380  Sum_probs=210.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||+|+||+||+|.+..+++.||||++....           ......+++.+|+.+|+.++||||+++++++.
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   69 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-----------QNLVSCKRVFRELKMLCFFKHDNVLSALDILQ   69 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-----------cchHHHHHHHHHHHHHHhCCCCCcCCHhheec
Confidence            4889999999999999999999999999999884321           11123457888999999999999999999998


Q ss_pred             cCC-----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           97 TDK-----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        97 ~~~-----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ...     .+|+||||+. ++|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        70 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~D  146 (372)
T cd07853          70 PPHIDPFEEIYVVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICD  146 (372)
T ss_pred             CCCccccceEEEEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEecc
Confidence            776     8999999996 6787776543  4599999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                       .......++|+.|+
T Consensus       147 fg~a~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~  171 (372)
T cd07853         147 FGLARVEEPDE-------------------------------------------------------SKHMTQEVVTQYYR  171 (372)
T ss_pred             ccceeecccCc-------------------------------------------------------cccCCCCCcCCCcC
Confidence            99987543211                                                       01112335889999


Q ss_pred             cchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----------------------CC---C---
Q 014344          252 APEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-----------------------RP---P---  301 (426)
Q Consensus       252 aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-----------------------~~---~---  301 (426)
                      |||++.+. .++.++|||||||++|||++|+.||.+.+....+..+..                       .+   +   
T Consensus       172 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (372)
T cd07853         172 APEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLP  251 (372)
T ss_pred             CHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchH
Confidence            99999874 478999999999999999999999998876655443321                       11   0   


Q ss_pred             ----CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          302 ----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       302 ----~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                          .....+..+.+||.+||+.||.+|||+.|+|.||||++..+
T Consensus       252 ~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~  296 (372)
T cd07853         252 VLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRL  296 (372)
T ss_pred             HhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCcc
Confidence                11233677899999999999999999999999999988643

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=8.7e-47  Score=383.47  Aligned_cols=258  Identities=27%  Similarity=0.380  Sum_probs=220.3

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCC-CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVES-SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ...|.+.+.||+|++|.||+|.+..+ ++.||+|.+...             .......+..|+.+|+.++||||+++++
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~-------------~~~~~~~~~~E~~~l~~l~Hpniv~~~~  132 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN-------------DERQAAYARSELHCLAACDHFGIVKHFD  132 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC-------------CHHHHHHHHHHHHHHHhCCCCCEeEEEE
Confidence            44599999999999999999998877 788999976322             1123456778999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +|..++.+|+|||||+||+|.+++...  ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus       133 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~D  212 (478)
T PTZ00267        133 DFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGD  212 (478)
T ss_pred             EEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEe
Confidence            999999999999999999999877542  234689999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+....                                                      ........+||+.|+
T Consensus       213 Fgla~~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~  238 (478)
T PTZ00267        213 FGFSKQYSDSV------------------------------------------------------SLDVASSFCGTPYYL  238 (478)
T ss_pred             CcCceecCCcc------------------------------------------------------ccccccccCCCcccc
Confidence            99998653211                                                      011233557999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      |||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..++....  .....+..+.+||.+||..||++||+++
T Consensus       239 aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~  318 (478)
T PTZ00267        239 APELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQ  318 (478)
T ss_pred             CHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHH
Confidence            99999999999999999999999999999999999888887777764332  2235678899999999999999999999


Q ss_pred             HHhcCCCcCC
Q 014344          330 EIKGHEFFKG  339 (426)
Q Consensus       330 eil~hp~f~~  339 (426)
                      +++.|||++.
T Consensus       319 ~~l~~~~~~~  328 (478)
T PTZ00267        319 QLLHTEFLKY  328 (478)
T ss_pred             HHHhCHHHHH
Confidence            9999999864

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=7.3e-47  Score=370.46  Aligned_cols=253  Identities=25%  Similarity=0.420  Sum_probs=206.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      -.++|++++.||+|+||.||+|.+..+++.||||++.+..           ........+.+|+.+++.++||||+++++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~niv~~~~   83 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-----------QNQTHAKRAYRELVLMKCVNHKNIISLLN   83 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-----------cChHHHHHHHHHHHHHHHhCCCchhceee
Confidence            4678999999999999999999999999999999985422           11223456778999999999999999999


Q ss_pred             eeecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           94 VLSTD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        94 ~~~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ++...      ..+|+||||+++ +|...+..    .+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~  158 (355)
T cd07874          84 VFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL  158 (355)
T ss_pred             eeeccccccccceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCE
Confidence            98644      357999999975 56555432    38899999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||+++.....                                                         ......+||
T Consensus       159 kl~Dfg~~~~~~~~---------------------------------------------------------~~~~~~~~t  181 (355)
T cd07874         159 KILDFGLARTAGTS---------------------------------------------------------FMMTPYVVT  181 (355)
T ss_pred             EEeeCcccccCCCc---------------------------------------------------------cccCCcccc
Confidence            99999998754211                                                         112234689


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----------------------CCC---
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----------------------PPD---  302 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~----------------------~~~---  302 (426)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..++..                      .+.   
T Consensus       182 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (355)
T cd07874         182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG  261 (355)
T ss_pred             CCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccc
Confidence            9999999999999999999999999999999999999887755443322110                      000   


Q ss_pred             ------------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 ------------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 ------------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                        ....+..+++||.+||..||++|||+.|+|+||||..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence                              0012356789999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=6.4e-47  Score=383.95  Aligned_cols=249  Identities=23%  Similarity=0.347  Sum_probs=199.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC------CCCc
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE------HPLL   88 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~i   88 (426)
                      .++|++++.||+|+||+||+|.+..+++.||||++....              ...+....|+.+++.+.      |+++
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--------------~~~~~~~~e~~~l~~l~~~~~~~~~~i  193 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--------------KYTRDAKIEIQFMEKVRQADPADRFPL  193 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--------------hhHHHHHHHHHHHHHHhhcCcccCcce
Confidence            468999999999999999999999999999999984321              11223445666766664      4568


Q ss_pred             ceeeeeeecC-CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCC-
Q 014344           89 PRLRGVLSTD-KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENG-  165 (426)
Q Consensus        89 v~l~~~~~~~-~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g-  165 (426)
                      +.++++|..+ ..+|+|||++ |++|.+++...  +.+++..++.++.||+.||+|||+ .|||||||||+|||++.++ 
T Consensus       194 ~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~  270 (467)
T PTZ00284        194 MKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDT  270 (467)
T ss_pred             eeeEEEEEcCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCc
Confidence            8899988764 5789999998 78888877654  359999999999999999999998 5999999999999998765 


Q ss_pred             ---------------cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCC
Q 014344          166 ---------------HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPP  230 (426)
Q Consensus       166 ---------------~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (426)
                                     .+||+|||++....                                                   
T Consensus       271 ~~~~~~~~~~~~~~~~vkl~DfG~~~~~~---------------------------------------------------  299 (467)
T PTZ00284        271 VVDPVTNRALPPDPCRVRICDLGGCCDER---------------------------------------------------  299 (467)
T ss_pred             ccccccccccCCCCceEEECCCCccccCc---------------------------------------------------
Confidence                           49999999875321                                                   


Q ss_pred             CCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC-----
Q 014344          231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD-----  302 (426)
Q Consensus       231 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~-----  302 (426)
                              ......+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+..   ..+.     
T Consensus       300 --------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~  371 (467)
T PTZ00284        300 --------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGR  371 (467)
T ss_pred             --------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhh
Confidence                    112345799999999999999999999999999999999999999998776554433211   0000     


Q ss_pred             -----------------------------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 -----------------------------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 -----------------------------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                                         .......+.|||.+||++||.+|||++|+|+||||..
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~  443 (467)
T PTZ00284        372 CGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK  443 (467)
T ss_pred             ccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence                                               0001345679999999999999999999999999975

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.1e-47  Score=370.49  Aligned_cols=251  Identities=29%  Similarity=0.473  Sum_probs=207.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|.+..+++.||+|++.+.....           .....+.+|+.+|+.++||||++++++|
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~iv~~~~~~   83 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSL-----------IHARRTYRELRLLKHMKHENVIGLLDVF   83 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhh-----------HHHHHHHHHHHHHHhcCCCchhhhhhhh
Confidence            67999999999999999999999999999999985432111           1234577899999999999999999988


Q ss_pred             ecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           96 STD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        96 ~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ...      ...|++|+++ |++|..++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        84 ~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl  159 (343)
T cd07878          84 TPATSIENFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI  159 (343)
T ss_pred             cccccccccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEE
Confidence            543      4579999998 7899887653   34999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.....                                                           .....+||+.
T Consensus       160 ~Dfg~~~~~~~-----------------------------------------------------------~~~~~~~t~~  180 (343)
T cd07878         160 LDFGLARQADD-----------------------------------------------------------EMTGYVATRW  180 (343)
T ss_pred             cCCccceecCC-----------------------------------------------------------CcCCcccccc
Confidence            99999875421                                                           1123468999


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C--------------------CC---
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P--------------------PD---  302 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~--------------------~~---  302 (426)
                      |+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...   +                    +.   
T Consensus       181 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (343)
T cd07878         181 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQ  260 (343)
T ss_pred             ccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccc
Confidence            999999977 56899999999999999999999999887665544433210   0                    00   


Q ss_pred             ------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          303 ------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       303 ------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                            ..+.++.+.+||.+||..||.+|||+.|+|.||||...
T Consensus       261 ~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         261 QDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             hhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence                  11235567899999999999999999999999999753

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=3.7e-46  Score=357.03  Aligned_cols=259  Identities=25%  Similarity=0.386  Sum_probs=212.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      .++++|++++.||.|+||.||+|++..+++.||+|.+.....            ......+..|+.+++.++||||++++
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~E~~~l~~l~h~nI~~~~   70 (301)
T cd07873           3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE------------EGAPCTAIREVSLLKDLKHANIVTLH   70 (301)
T ss_pred             ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc------------cCchhHHHHHHHHHHhcCCCCcceEE
Confidence            467889999999999999999999999999999999843211            11223566799999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++..+...|+||||+. ++|..++.... ..+++..++.++.||+.||+|||+.||+||||||+|||++.++.++|+||
T Consensus        71 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~df  148 (301)
T cd07873          71 DIIHTEKSLTLVFEYLD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADF  148 (301)
T ss_pred             EEEecCCeEEEEEeccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcC
Confidence            99999999999999997 68888776543 35899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                        .......+++.|+|
T Consensus       149 g~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~  172 (301)
T cd07873         149 GLARAKSIPT--------------------------------------------------------KTYSNEVVTLWYRP  172 (301)
T ss_pred             cchhccCCCC--------------------------------------------------------CcccccceeecccC
Confidence            9986542110                                                        01112347889999


Q ss_pred             chhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC-------------------CC-------
Q 014344          253 PEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP-------------------PD-------  302 (426)
Q Consensus       253 PE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~-------------------~~-------  302 (426)
                      ||++.+ ..++.++|||||||++|+|++|++||.+.+..+....+..   .+                   +.       
T Consensus       173 PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (301)
T cd07873         173 PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLH  252 (301)
T ss_pred             cHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHH
Confidence            999876 4578899999999999999999999998876555433211   10                   00       


Q ss_pred             --CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          303 --LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       303 --~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                        ....++.+++||.+||+.||.+|||++|+++||||+...
T Consensus       253 ~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         253 NHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             hhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence              113466789999999999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.1e-47  Score=372.09  Aligned_cols=258  Identities=28%  Similarity=0.454  Sum_probs=228.7

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      .....|.++++||+|.|++|.+|++.-++..||||++++......           ..+.+.+|+++|+.|+|||||+++
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-----------~~~k~~rev~imk~l~HPnIvkl~  121 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-----------KRQKLGREVDIMKSLNHPNIVKLF  121 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-----------HHHHHHHHHHHHHhcCCcceeeee
Confidence            446679999999999999999999999999999999987764332           345588899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      .+.+++..+|+||||+.+|++++++..+..  ..+..++.++.|++.|++|||+++|||||||++||||+.+..+||+||
T Consensus       122 ~v~~t~~~lylV~eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDf  199 (596)
T KOG0586|consen  122 SVIETEATLYLVMEYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADF  199 (596)
T ss_pred             eeeeecceeEEEEEeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeecc
Confidence            999999999999999999999999987654  777999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+..                                                         .....++||++.|.|
T Consensus       200 gfS~~~~~---------------------------------------------------------~~~lqt~cgsppyAa  222 (596)
T KOG0586|consen  200 GFSTFFDY---------------------------------------------------------GLMLQTFCGSPPYAA  222 (596)
T ss_pred             ccceeecc---------------------------------------------------------cccccccCCCCCccC
Confidence            99988752                                                         235667899999999


Q ss_pred             chhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          253 PEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       253 PE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      ||++.+..| ++.+|+||+|+++|.|+.|..||++.+.++.-.+.+...... .-.+.++.+||+++|..+|.+|++.++
T Consensus       223 PEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dq  302 (596)
T KOG0586|consen  223 PELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQ  302 (596)
T ss_pred             hHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhhccCccccCCHHH
Confidence            999999888 689999999999999999999999998887766665333222 223678999999999999999999999


Q ss_pred             HhcCCCcCCC
Q 014344          331 IKGHEFFKGV  340 (426)
Q Consensus       331 il~hp~f~~~  340 (426)
                      |+.|.|....
T Consensus       303 im~~~W~n~~  312 (596)
T KOG0586|consen  303 IMKDRWRNDL  312 (596)
T ss_pred             hhhhcccchh
Confidence            9999999754

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=4e-46  Score=355.19  Aligned_cols=266  Identities=27%  Similarity=0.451  Sum_probs=222.0

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      -+.-+.|++++.||+|+||.||+|++..+++.+|+|++...             .......+..|+.+++.++||||+++
T Consensus         8 ~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-------------~~~~~~~~~~e~~~l~~l~h~~i~~~   74 (292)
T cd06644           8 LDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-------------SEEELEDYMVEIEILATCNHPYIVKL   74 (292)
T ss_pred             cCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-------------CHHHHHHHHHHHHHHHhCCCCcEeee
Confidence            34456799999999999999999999999999999998432             12345677889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++.+..+..+|+||||++|++|..++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~d  153 (292)
T cd06644          75 LGAFYWDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLAD  153 (292)
T ss_pred             EEEEEeCCeEEEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEcc
Confidence            999999999999999999999988765443 4589999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                        .......+++.|+
T Consensus       154 fg~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~  177 (292)
T cd06644         154 FGVSAKNVKTL--------------------------------------------------------QRRDSFIGTPYWM  177 (292)
T ss_pred             Cccceeccccc--------------------------------------------------------cccceecCCcccc
Confidence            99876532110                                                        1122345888999


Q ss_pred             cchhhc-----CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhccCC
Q 014344          252 APEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       252 aPE~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~~dP  322 (426)
                      |||++.     ...++.++|+|||||++|+|++|..||...+....+.++......    ....+..+.+||.+||..+|
T Consensus       178 aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  257 (292)
T cd06644         178 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHP  257 (292)
T ss_pred             CceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCc
Confidence            999985     344678999999999999999999999887766655555433221    22446789999999999999


Q ss_pred             CCCCChHHHhcCCCcCCCChhhhhh
Q 014344          323 TKRIGVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~~~~~~~~~  347 (426)
                      ++||+++++++||||..++|....+
T Consensus       258 ~~Rp~~~~il~~~~~~~~~~~~~~~  282 (292)
T cd06644         258 ETRPSAAQLLEHPFVSSVTSNRPLR  282 (292)
T ss_pred             ccCcCHHHHhcCccccccccchhHH
Confidence            9999999999999999988876544

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.2e-45  Score=344.79  Aligned_cols=254  Identities=24%  Similarity=0.430  Sum_probs=215.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++++.||+|++|.||+|.+..+++.||+|.+......           ....+.+..|+.+++.++|||++++++.+.
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-----------RRERKAAEQEAQLLSQLKHPNIVAYRESWE   69 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-----------HHHHHHHHHHHHHHHhCCCCCeeeeeeeec
Confidence            499999999999999999999999999999998543321           123456788999999999999999999886


Q ss_pred             c-CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           97 T-DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        97 ~-~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      . +..+|++|||+++++|.+++.......+++..+..++.|++.||.+||+.||+||||||+||+++.++.++|+|||++
T Consensus        70 ~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~  149 (257)
T cd08223          70 GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIA  149 (257)
T ss_pred             CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccce
Confidence            4 457899999999999999887665566999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        .......|++.|+|||+
T Consensus       150 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  173 (257)
T cd08223         150 RVLENQC--------------------------------------------------------DMASTLIGTPYYMSPEL  173 (257)
T ss_pred             EEecccC--------------------------------------------------------CccccccCCcCccChhH
Confidence            7653110                                                        01123458899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+..++.++|+|||||++|+|++|+.||...+.......+....  ......+..+.+||.+||+.+|.+||++.++++
T Consensus       174 ~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         174 FSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             hcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            999999999999999999999999999999887766655554332  222345788999999999999999999999999


Q ss_pred             CCCc
Q 014344          334 HEFF  337 (426)
Q Consensus       334 hp~f  337 (426)
                      ||||
T Consensus       254 ~~~~  257 (257)
T cd08223         254 QPYI  257 (257)
T ss_pred             CCCC
Confidence            9997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=4.9e-46  Score=360.55  Aligned_cols=263  Identities=19%  Similarity=0.306  Sum_probs=208.5

Q ss_pred             EEEeeeccc--CceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           19 RIVSALGRG--AKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        19 ~i~~~LG~G--~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +++++||+|  +|++||++++..+|+.||+|++.....           .......+..|+.+++.++||||++++++|.
T Consensus         1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~   69 (327)
T cd08227           1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-----------TNEMVTFLQGELHVSKLFNHPNIVPYRATFI   69 (327)
T ss_pred             ChhhhccccccceEEEEEEeecccCcEEEEEEechhhc-----------cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE
Confidence            367889999  789999999999999999999854321           1123456778999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .++..|+||||+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.
T Consensus        70 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~  149 (327)
T cd08227          70 ADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL  149 (327)
T ss_pred             ECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhh
Confidence            99999999999999999999876554568999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ..........                                                 .........+++..|+|||++
T Consensus       150 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~y~aPE~~  180 (327)
T cd08227         150 SMINHGQRLR-------------------------------------------------VVHDFPKYSVKVLPWLSPEVL  180 (327)
T ss_pred             cccccccccc-------------------------------------------------ccccccccccceecccChHHh
Confidence            4321100000                                                 000011123477889999999


Q ss_pred             cC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-C--------------------------------
Q 014344          257 EG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-P--------------------------------  301 (426)
Q Consensus       257 ~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~--------------------------------  301 (426)
                      .+  ..++.++|||||||++|+|++|+.||................ +                                
T Consensus       181 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (327)
T cd08227         181 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTV  260 (327)
T ss_pred             hcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCccccc
Confidence            76  468999999999999999999999998765444332222110 0                                


Q ss_pred             --------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          302 --------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       302 --------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                                    .....++.+.+||.+||+.||++|||++++++||||+.+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         261 STPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             CCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence                          0001245788999999999999999999999999998653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-45  Score=346.16  Aligned_cols=259  Identities=27%  Similarity=0.437  Sum_probs=217.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|++|.||+|.+..+++.||+|++........        .......+.+|+.++++++||||+++++++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~--------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   73 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPE--------TKKEVNALECEIQLLKNLQHERIVQYYGCL   73 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchh--------hHHHHHHHHHHHHHHHhCCCCCeeeeEEEE
Confidence            469999999999999999999999999999999854322111        112345788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+..+|+|+||++|++|.+++...  +.+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||++
T Consensus        74 ~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~  151 (263)
T cd06625          74 RDDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGAS  151 (263)
T ss_pred             ccCCeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence            9999999999999999999987754  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .........                                                     ........|++.|+|||+
T Consensus       152 ~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~aPE~  178 (263)
T cd06625         152 KRLQTICSS-----------------------------------------------------GTGMKSVTGTPYWMSPEV  178 (263)
T ss_pred             eeccccccc-----------------------------------------------------cccccCCCcCccccCcce
Confidence            765321100                                                     001123457889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      +.+..++.++|||||||++|+|++|+.||...+......++....   ......+..+.++|.+||..+|.+|||+.+++
T Consensus       179 ~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll  258 (263)
T cd06625         179 ISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELL  258 (263)
T ss_pred             eccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence            999989999999999999999999999998877666555544322   12234578899999999999999999999999


Q ss_pred             cCCCc
Q 014344          333 GHEFF  337 (426)
Q Consensus       333 ~hp~f  337 (426)
                      +||||
T Consensus       259 ~~~~~  263 (263)
T cd06625         259 RHFFV  263 (263)
T ss_pred             hCCCC
Confidence            99997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4.2e-46  Score=392.11  Aligned_cols=264  Identities=27%  Similarity=0.403  Sum_probs=217.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ..+..+++|++++.||+|+||+||+|++..+++.||+|++......           ......+..|+.+|+.|+||||+
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-----------e~~~~~~~~EI~IL~~L~HPNIV   75 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-----------EREKSQLVIEVNVMRELKHKNIV   75 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-----------HHHHHHHHHHHHHHHHcCCCCcC
Confidence            3456778999999999999999999999999999999998543221           12345788899999999999999


Q ss_pred             eeeeeeec--CCeEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-------CCcccCCCCCC
Q 014344           90 RLRGVLST--DKFVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNM-------GIVYRDLKPEN  158 (426)
Q Consensus        90 ~l~~~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~-------giiHrDlKp~N  158 (426)
                      +++++|..  ...+|||||||++++|..++....  ...+++..++.|+.||+.||.|||+.       +||||||||+|
T Consensus        76 rl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeN  155 (1021)
T PTZ00266         76 RYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQN  155 (1021)
T ss_pred             eEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHH
Confidence            99999854  467999999999999999886532  34599999999999999999999985       49999999999


Q ss_pred             eeecc-----------------CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCC
Q 014344          159 IMIQE-----------------NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVH  221 (426)
Q Consensus       159 iLl~~-----------------~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (426)
                      |||+.                 .+.+||+|||++..+...                                        
T Consensus       156 ILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------------------  195 (1021)
T PTZ00266        156 IFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------------------  195 (1021)
T ss_pred             eEeecCccccccccccccccCCCCceEEccCCcccccccc----------------------------------------
Confidence            99964                 345899999998754211                                        


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC
Q 014344          222 SPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR  299 (426)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~  299 (426)
                                       ......+||+.|+|||++.+  ..++.++||||||||+|+|++|..||...+....+...+..
T Consensus       196 -----------------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~  258 (1021)
T PTZ00266        196 -----------------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKR  258 (1021)
T ss_pred             -----------------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhc
Confidence                             01223469999999999865  45889999999999999999999999877665555544433


Q ss_pred             CCC--CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          300 PPD--LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       300 ~~~--~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                      .+.  ....+..+.+||..||..+|.+||++.++|.|||++.+.
T Consensus       259 ~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~  302 (1021)
T PTZ00266        259 GPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG  302 (1021)
T ss_pred             CCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence            332  235678899999999999999999999999999998654

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.8e-46  Score=350.60  Aligned_cols=251  Identities=38%  Similarity=0.668  Sum_probs=210.9

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |++++.||+|+||+||+|.+..+++.||+|++........           .......|+.+++.++||||+++++++..
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-----------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~   69 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-----------EREENIREIKILRRLRHPNIVQILDVFQD   69 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-----------HHHHHHHHHHHHHHHTBTTBCHEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-----------ccchhhhhhhccccccccccccccccccc
Confidence            8999999999999999999999999999999977654332           12233459999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ...+++||||+.+++|.+++...  ..+++..+..++.||+.||++||++||+||||||+|||++.++.++|+|||.+..
T Consensus        70 ~~~~~~v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~  147 (260)
T PF00069_consen   70 DNYLYIVMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVK  147 (260)
T ss_dssp             SSEEEEEEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred             ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999998743  4489999999999999999999999999999999999999999999999999875


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      ...                                                        .........+|+.|+|||++.
T Consensus       148 ~~~--------------------------------------------------------~~~~~~~~~~~~~y~aPE~~~  171 (260)
T PF00069_consen  148 LSE--------------------------------------------------------NNENFNPFVGTPEYMAPEVLQ  171 (260)
T ss_dssp             STS--------------------------------------------------------TTSEBSSSSSSGGGSCHHHHT
T ss_pred             ccc--------------------------------------------------------ccccccccccccccccccccc
Confidence            411                                                        011233456899999999998


Q ss_pred             -CCCCChhhHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          258 -GKGHDFAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       258 -~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                       +..++.++|+||||+++|+|++|..||....   ......+.....     ......+..+.++|.+||+.||++||++
T Consensus       172 ~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~  251 (260)
T PF00069_consen  172 QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSA  251 (260)
T ss_dssp             TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTH
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCH
Confidence             7888999999999999999999999999873   233333332211     1111123789999999999999999999


Q ss_pred             HHHhcCCCc
Q 014344          329 EEIKGHEFF  337 (426)
Q Consensus       329 ~eil~hp~f  337 (426)
                      .++++||||
T Consensus       252 ~~l~~~~~~  260 (260)
T PF00069_consen  252 EELLKHPWF  260 (260)
T ss_dssp             HHHHTSGGG
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=3.8e-46  Score=362.91  Aligned_cols=257  Identities=21%  Similarity=0.325  Sum_probs=205.9

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEE-----cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-C
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKD-----VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-E   84 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~   84 (426)
                      +.+..++|++++.||+|+||.||+|.+     ..+++.||+|++....            .......+..|+.+|..+ +
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~~   69 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA------------TASEHKALMSELKILIHIGN   69 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc------------chHHHHHHHHHHHHHHHhcc
Confidence            456678899999999999999999985     2456789999984321            112345688899999999 8


Q ss_pred             CCCcceeeeeeecC-CeEEEEEeccCCCChHHHHHHhc------------------------------------------
Q 014344           85 HPLLPRLRGVLSTD-KFVGYAIDYCPGRDLHSLRKQQS------------------------------------------  121 (426)
Q Consensus        85 hp~iv~l~~~~~~~-~~~~lV~Ey~~gg~L~~l~~~~~------------------------------------------  121 (426)
                      ||||+++++++... ..+|+|||||+||+|.+++....                                          
T Consensus        70 h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (338)
T cd05102          70 HLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRF  149 (338)
T ss_pred             CcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcccccc
Confidence            99999999988654 46899999999999999876432                                          


Q ss_pred             ------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCC
Q 014344          122 ------------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP  183 (426)
Q Consensus       122 ------------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~  183 (426)
                                        ...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~  229 (338)
T cd05102         150 QPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD  229 (338)
T ss_pred             ccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc
Confidence                              13477888999999999999999999999999999999999999999999999876532110


Q ss_pred             CCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCCh
Q 014344          184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF  263 (426)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  263 (426)
                                                                            .....+..+|+.|+|||++.+..++.
T Consensus       230 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~  255 (338)
T cd05102         230 ------------------------------------------------------YVRKGSARLPLKWMAPESIFDKVYTT  255 (338)
T ss_pred             ------------------------------------------------------hhcccCCCCCccccCcHHhhcCCCCc
Confidence                                                                  00112234678899999999999999


Q ss_pred             hhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          264 AVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       264 ~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ++|||||||++|||++ |..||.+....+.+...+..   .......+..+.+||.+||..||.+|||+.+|++
T Consensus       256 ~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         256 QSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             ccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999996 99999886654444333322   1222345788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=5.5e-46  Score=358.41  Aligned_cols=248  Identities=26%  Similarity=0.406  Sum_probs=192.2

Q ss_pred             EeeecccCceEEEEEEEc--CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee--
Q 014344           21 VSALGRGAKGVVFLVKDV--ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS--   96 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~--   96 (426)
                      .++||+|+||+||+|+++  .+++.||+|.+....               ....+.+|+.+|+.++||||++++++|.  
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   70 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---------------ISMSACREIALLRELKHPNVISLQKVFLSH   70 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---------------CcHHHHHHHHHHHhcCCCCCcceeeeEecC
Confidence            468999999999999976  467899999884321               1234667999999999999999999985  


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee----ccCC
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQ-------SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI----QENG  165 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~-------~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl----~~~g  165 (426)
                      .+..+|++|||+. ++|..++...       ....+++..++.++.||+.||+|||++||+||||||+|||+    +..+
T Consensus        71 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~  149 (317)
T cd07868          71 ADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG  149 (317)
T ss_pred             CCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence            3567899999995 6888776532       12248999999999999999999999999999999999999    4567


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++..+.....                                                     ........+
T Consensus       150 ~~kl~DfG~a~~~~~~~~-----------------------------------------------------~~~~~~~~~  176 (317)
T cd07868         150 RVKIADMGFARLFNSPLK-----------------------------------------------------PLADLDPVV  176 (317)
T ss_pred             cEEEeecCceeccCCCCc-----------------------------------------------------cccccCCcc
Confidence            999999999976532110                                                     001123456


Q ss_pred             cCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHh---cCCC-----------
Q 014344          246 GTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---------ETFYRIL---CRPP-----------  301 (426)
Q Consensus       246 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---------~~~~~i~---~~~~-----------  301 (426)
                      ||+.|+|||++.+ ..++.++||||+||++|+|++|++||......         ..+.++.   ..+.           
T Consensus       177 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (317)
T cd07868         177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP  256 (317)
T ss_pred             ccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhcc
Confidence            8999999999987 45899999999999999999999999754321         1111111   0000           


Q ss_pred             -------------------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          302 -------------------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       302 -------------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                                               .....+..+.+||++||++||.+|||++|+|+||||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         257 EHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             chhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                                     001123568899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9.9e-46  Score=367.09  Aligned_cols=256  Identities=25%  Similarity=0.329  Sum_probs=208.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEc--CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDV--ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ..+|++++.||+|+||.||+|...  .+++.||+|.+...                  ....+|+.+|+.++||||++++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------------------~~~~~E~~il~~l~h~~iv~~~  152 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------------------KTPGREIDILKTISHRAIINLI  152 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------------------ccHHHHHHHHHhcCCCCcccee
Confidence            346999999999999999999764  45678999987432                  1234699999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++|.....+|+|||++. ++|..++..  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+||
T Consensus       153 ~~~~~~~~~~lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~Df  229 (392)
T PHA03207        153 HAYRWKSTVCMVMPKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDF  229 (392)
T ss_pred             eeEeeCCEEEEEehhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccC
Confidence            99999999999999995 788887743  345999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+.....                                                      .......+||+.|+|
T Consensus       230 G~a~~~~~~~~------------------------------------------------------~~~~~~~~gt~~y~a  255 (392)
T PHA03207        230 GAACKLDAHPD------------------------------------------------------TPQCYGWSGTLETNS  255 (392)
T ss_pred             ccccccCcccc------------------------------------------------------cccccccccccCccC
Confidence            99876532110                                                      112234579999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhc----------------------------CCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILC----------------------------RPP  301 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~----------------------------~~~  301 (426)
                      ||++.+..|+.++|||||||++|||++|+.||.+...   ...+..+..                            .++
T Consensus       256 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (392)
T PHA03207        256 PELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPP  335 (392)
T ss_pred             HhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCC
Confidence            9999999999999999999999999999999976532   111111110                            000


Q ss_pred             CC-------CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhhh
Q 014344          302 DL-------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       302 ~~-------~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~~  345 (426)
                      ..       ...+.++.+||.+||..||.+|||+.|+|.||||+...|..+
T Consensus       336 ~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~  386 (392)
T PHA03207        336 YTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLL  386 (392)
T ss_pred             ccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhh
Confidence            00       123456889999999999999999999999999998777665

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.4e-45  Score=348.76  Aligned_cols=257  Identities=31%  Similarity=0.519  Sum_probs=214.7

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEE
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGY  103 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l  103 (426)
                      ||+|+||+||+|.+..+++.||+|++.+......          .....+..|+.+|+.++||||+++++++...+..|+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   70 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----------KGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCL   70 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh----------hhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEE
Confidence            6999999999999999999999999865432211          234456779999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCC
Q 014344          104 AIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP  183 (426)
Q Consensus       104 V~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~  183 (426)
                      ||||++|++|.+++.......+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++....... 
T Consensus        71 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~-  149 (277)
T cd05577          71 VMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-  149 (277)
T ss_pred             EEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC-
Confidence            9999999999998876655569999999999999999999999999999999999999999999999999886543110 


Q ss_pred             CCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCCh
Q 014344          184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF  263 (426)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  263 (426)
                                                                              ......++..|+|||++.+..++.
T Consensus       150 --------------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~  173 (277)
T cd05577         150 --------------------------------------------------------KIKGRAGTPGYMAPEVLQGEVYDF  173 (277)
T ss_pred             --------------------------------------------------------ccccccCCCCcCCHHHhcCCCCCc
Confidence                                                                    112234788899999999888999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCC-----ChHHHhc
Q 014344          264 AVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKG  333 (426)
Q Consensus       264 ~~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~-----s~~eil~  333 (426)
                      ++|+|||||++|+|++|+.||.....    ......+...+.. ....++.+.++|.+||+.||.+||     ++.+++.
T Consensus       174 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         174 SVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             hhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            99999999999999999999987654    2222222222222 234578899999999999999999     8888999


Q ss_pred             CCCcCCCChhhhhh
Q 014344          334 HEFFKGVNWELLLK  347 (426)
Q Consensus       334 hp~f~~~~~~~~~~  347 (426)
                      ||||+.++|+....
T Consensus       254 h~~~~~~~~~~~~~  267 (277)
T cd05577         254 HPLFKDLNWRRLEA  267 (277)
T ss_pred             ChhhhcCChhhhhc
Confidence            99999999988754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.5e-45  Score=349.59  Aligned_cols=253  Identities=25%  Similarity=0.411  Sum_probs=207.1

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||+|++|.||+|++..+++.||||++....           ........+..|+.+++.++||||+++++++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   69 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLES-----------EEEGVPSTAIREISLLKELQHPNIVCLQDVLM   69 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEecccc-----------ccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe
Confidence            5899999999999999999999999999999984321           11123456778999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~-~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+..+|+||||+. ++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++
T Consensus        70 ~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~  148 (285)
T cd07861          70 QESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLA  148 (285)
T ss_pred             eCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccce
Confidence            9999999999997 68888766433 256899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        .......+++.|+|||+
T Consensus       149 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  172 (285)
T cd07861         149 RAFGIPV--------------------------------------------------------RVYTHEVVTLWYRAPEV  172 (285)
T ss_pred             eecCCCc--------------------------------------------------------ccccCCcccccccChHH
Confidence            7542110                                                        01112257889999999


Q ss_pred             hcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC---------------------------CCCC
Q 014344          256 IEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP---------------------------PDLV  304 (426)
Q Consensus       256 ~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~---------------------------~~~~  304 (426)
                      +.+. .++.++|+|||||++|+|++|++||.+.+.......+..   .+                           ....
T Consensus       173 ~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (285)
T cd07861         173 LLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVK  252 (285)
T ss_pred             hcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcC
Confidence            8764 478899999999999999999999987765443322210   00                           0012


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ..+.++.+||++||+.||.+|||+.+|+.||||
T Consensus       253 ~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         253 NLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             CCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            346788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=3.8e-45  Score=340.98  Aligned_cols=254  Identities=26%  Similarity=0.372  Sum_probs=218.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|++|.||+|.+..+++.||+|.+......           ......+..|+.+++.++||||+++++++.
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   69 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-----------RREREEAIDEARVLAKLDSSYIIRYYESFL   69 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-----------HHHHHHHHHHHHHHHhcCCCCeehheeeec
Confidence            589999999999999999999999999999998543322           123457888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .++..|+||||++|++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~  149 (256)
T cd08529          70 DKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAK  149 (256)
T ss_pred             cCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccce
Confidence            99999999999999999999887655679999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+....                                                        .......|++.|+|||++
T Consensus       150 ~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~~  173 (256)
T cd08529         150 LLSDNT--------------------------------------------------------NFANTIVGTPYYLSPELC  173 (256)
T ss_pred             eccCcc--------------------------------------------------------chhhccccCccccCHHHh
Confidence            653211                                                        011234588999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CC-CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-DL-VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~-~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+..++.++|+|||||++|+|++|+.||...+.......+..... .. ...+..+.++|.+||+.+|++||++.+++.|
T Consensus       174 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         174 EDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             cCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            999899999999999999999999999998887666666554322 22 2457889999999999999999999999999


Q ss_pred             CCc
Q 014344          335 EFF  337 (426)
Q Consensus       335 p~f  337 (426)
                      ||+
T Consensus       254 ~~~  256 (256)
T cd08529         254 PSL  256 (256)
T ss_pred             CCC
Confidence            985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.1e-46  Score=364.70  Aligned_cols=249  Identities=24%  Similarity=0.368  Sum_probs=199.9

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +...+|++++.||+|+||.||+|++..+++.||+|+..+.                   ....|+.+++.++||||++++
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------------------~~~~E~~~l~~l~h~~iv~~~  123 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------------------TTLIEAMLLQNVNHPSVIRMK  123 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------------------ccHHHHHHHHhCCCCCCcChh
Confidence            3445799999999999999999999999999999985221                   224589999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++......|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       124 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~Df  201 (357)
T PHA03209        124 DTLVSGAITCMVLPHYS-SDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDL  201 (357)
T ss_pred             heEEeCCeeEEEEEccC-CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecC
Confidence            99999999999999995 68888776543 45999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++......                                                         .......||+.|+|
T Consensus       202 G~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~a  224 (357)
T PHA03209        202 GAAQFPVVA---------------------------------------------------------PAFLGLAGTVETNA  224 (357)
T ss_pred             ccccccccC---------------------------------------------------------cccccccccccccC
Confidence            998643110                                                         01123458999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCC-CCCCCCCHH---------HHHHHHhc----CCCCC---------------
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGA-TPFRGSSRK---------ETFYRILC----RPPDL---------------  303 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~-~pf~~~~~~---------~~~~~i~~----~~~~~---------------  303 (426)
                      ||++.+..++.++|||||||++|||+++. ++|......         ..+..++.    .+..+               
T Consensus       225 PE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (357)
T PHA03209        225 PEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEY  304 (357)
T ss_pred             CeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhh
Confidence            99999999999999999999999999754 444432110         11111110    01000               


Q ss_pred             ----------------CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          304 ----------------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       304 ----------------~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                      ...+..+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        305 ASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             cccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                            123456778999999999999999999999999975

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.2e-45  Score=353.01  Aligned_cols=252  Identities=28%  Similarity=0.443  Sum_probs=210.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+....            .......+..|+++++.++||||++++++|
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   68 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI------------KPAIRNQIIRELKVLHECNSPYIVGFYGAF   68 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc------------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            46999999999999999999999999999999884321            112345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      .+++.+|+||||++|++|.+++...  +.+++..++.++.|++.||.|||+ .+++||||||+|||++.++.++|+|||+
T Consensus        69 ~~~~~~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~  146 (308)
T cd06615          69 YSDGEISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV  146 (308)
T ss_pred             eeCCEEEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCC
Confidence            9999999999999999999998764  458999999999999999999997 6999999999999999999999999998


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +......                                                          .....+|++.|+|||
T Consensus       147 ~~~~~~~----------------------------------------------------------~~~~~~~~~~~~aPE  168 (308)
T cd06615         147 SGQLIDS----------------------------------------------------------MANSFVGTRSYMSPE  168 (308)
T ss_pred             ccccccc----------------------------------------------------------ccccCCCCcCccChh
Confidence            7654211                                                          112346899999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----------------------------------
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----------------------------------  299 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-----------------------------------  299 (426)
                      ++.+..++.++|+|||||++|+|++|+.||...+.......+-..                                   
T Consensus       169 ~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (308)
T cd06615         169 RLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVN  248 (308)
T ss_pred             HhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhc
Confidence            999888999999999999999999999999765533322111100                                   


Q ss_pred             --CCCC--CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          300 --PPDL--VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       300 --~~~~--~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                        ++..  ...+..+++||.+||..+|++|||+.++++||||..
T Consensus       249 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  292 (308)
T cd06615         249 EPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR  292 (308)
T ss_pred             CCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence              0010  123567999999999999999999999999999975

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.1e-44  Score=347.51  Aligned_cols=280  Identities=34%  Similarity=0.576  Sum_probs=226.6

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||++.+..+++.||+|.+.+......          .....+..|+.+++.++||||+++++.+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~i~~~~~~~   70 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILR----------NQIQQVFVERDILTFAENPFVVSMFCSF   70 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhH----------HHHHHHHHHHHHHHhCCCCCeeeeEEEE
Confidence            469999999999999999999999999999999865432111          2345777899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+..+|+||||++|++|.+++...  ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++
T Consensus        71 ~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~  148 (305)
T cd05609          71 ETKRHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLS  148 (305)
T ss_pred             ecCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCc
Confidence            9999999999999999999998764  34899999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      +.............                                         ...............|++.|+|||.
T Consensus       149 ~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~y~aPE~  187 (305)
T cd05609         149 KIGLMSLTTNLYEG-----------------------------------------HIEKDTREFLDKQVCGTPEYIAPEV  187 (305)
T ss_pred             cccCcCcccccccc-----------------------------------------ccccchhhccccCCccCccccCchh
Confidence            64321110000000                                         0000000011123458889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC----CCCCCCCHHHHHHHHHHhccCCCCCCC---h
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP----PDLVGEPTPLRNLIRRLLEKDPTKRIG---V  328 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~s---~  328 (426)
                      +.+..++.++|+|||||++|+|++|..||.+.+..+.+..+....    ......+..+.+||.+||..||++||+   +
T Consensus       188 ~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~  267 (305)
T cd05609         188 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGA  267 (305)
T ss_pred             ccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCH
Confidence            998889999999999999999999999999888777666665332    111245788999999999999999998   7


Q ss_pred             HHHhcCCCcCCCChhhhhhc
Q 014344          329 EEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       329 ~eil~hp~f~~~~~~~~~~~  348 (426)
                      .++++||||...+|....+.
T Consensus       268 ~~ll~~~~~~~~~~~~~~~~  287 (305)
T cd05609         268 FEVKQHRFFLGLDWNGLLRQ  287 (305)
T ss_pred             HHHHhCccccCCCHHHHhhc
Confidence            99999999999999987644

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-47  Score=340.85  Aligned_cols=250  Identities=28%  Similarity=0.423  Sum_probs=210.5

Q ss_pred             CCCcEEE-eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           15 FSCLRIV-SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        15 ~~~y~i~-~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      .++|+|- ++||-|-.|.|-.+.++.|++.+|+|++.                  ......+|+++.-.. .|||||.++
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~------------------Ds~KARrEVeLHw~~s~h~~iV~Ii  121 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL------------------DSPKARREVELHWMASGHPHIVSII  121 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHh------------------cCHHHHhHhhhhhhhcCCCceEEee
Confidence            3466665 68999999999999999999999999982                  123456688776555 499999999


Q ss_pred             eeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---CC
Q 014344           93 GVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---NG  165 (426)
Q Consensus        93 ~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~g  165 (426)
                      ++|++    -.++.+|||.++||+|++-++.++.+.|++.++..|++||..|+.|||+.+|+||||||||+|+..   +.
T Consensus       122 dVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na  201 (400)
T KOG0604|consen  122 DVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNA  201 (400)
T ss_pred             hhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCc
Confidence            99854    568899999999999999999998889999999999999999999999999999999999999975   45


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||+|+.-..                                                         .....+.|
T Consensus       202 ~lKLtDfGFAK~t~~---------------------------------------------------------~~~L~TPc  224 (400)
T KOG0604|consen  202 PLKLTDFGFAKETQE---------------------------------------------------------PGDLMTPC  224 (400)
T ss_pred             ceEecccccccccCC---------------------------------------------------------CccccCCc
Confidence            799999999986432                                                         12344557


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHhcCCCCC-----CCCCHHHHHHHHH
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK----ETFYRILCRPPDL-----VGEPTPLRNLIRR  316 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~~-----~~~~~~~~~li~~  316 (426)
                      -||.|+|||++....|+..+|+||+||++|-|++|.+||......    .+-.+|......+     ...+..++|+|++
T Consensus       225 ~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~  304 (400)
T KOG0604|consen  225 FTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRK  304 (400)
T ss_pred             ccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999765432    2334554333333     3346789999999


Q ss_pred             HhccCCCCCCChHHHhcCCCcCC
Q 014344          317 LLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ||..+|++|+|+.++++|||+.+
T Consensus       305 LLkt~PteRlTI~~~m~hpwi~~  327 (400)
T KOG0604|consen  305 LLKTEPTERLTIEEVMDHPWINQ  327 (400)
T ss_pred             HhcCCchhheeHHHhhcCchhcc
Confidence            99999999999999999999975

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.1e-45  Score=348.02  Aligned_cols=249  Identities=25%  Similarity=0.449  Sum_probs=208.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|.+..+++.||+|++.+..            .......+..|+.++++++||||+++++.+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   68 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI------------TVELQKQIMSELEILYKCDSPYIIGFYGAF   68 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC------------ChHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            46899999999999999999999999999999985431            112345688899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..++..++||||+++++|..+      ..+++..+..++.|++.||+|||+.||+||||||+|||++.++.++|+|||++
T Consensus        69 ~~~~~~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~  142 (279)
T cd06619          69 FVENRISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVS  142 (279)
T ss_pred             EECCEEEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence            999999999999999999654      23789999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+...                                                          .....+||+.|+|||+
T Consensus       143 ~~~~~~----------------------------------------------------------~~~~~~~~~~y~aPE~  164 (279)
T cd06619         143 TQLVNS----------------------------------------------------------IAKTYVGTNAYMAPER  164 (279)
T ss_pred             eecccc----------------------------------------------------------cccCCCCChhhcCcee
Confidence            754311                                                          1123468999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcC-CCC--CCCCCHHHHHHHHHHhccCCCCC
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-------ETFYRILCR-PPD--LVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-------~~~~~i~~~-~~~--~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      +.+..++.++|+|||||++|+|++|..||......       .....+... ++.  ....+..+.+||.+||+.+|.+|
T Consensus       165 ~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  244 (279)
T cd06619         165 ISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKER  244 (279)
T ss_pred             ecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhC
Confidence            99999999999999999999999999999653221       222222211 111  12356789999999999999999


Q ss_pred             CChHHHhcCCCcCCC
Q 014344          326 IGVEEIKGHEFFKGV  340 (426)
Q Consensus       326 ~s~~eil~hp~f~~~  340 (426)
                      |++++++.||||...
T Consensus       245 p~~~eil~~~~~~~~  259 (279)
T cd06619         245 PAPENLMDHPFIVQY  259 (279)
T ss_pred             CCHHHHhcCcccccc
Confidence            999999999999754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-45  Score=348.33  Aligned_cols=257  Identities=26%  Similarity=0.440  Sum_probs=217.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||.|+||.||+|.+..+++.+|+|++....             ......+..|+.+++.++||||+++++.
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~   70 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-------------EEELEDFMVEIDILSECKHPNIVGLYEA   70 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-------------HHHHHHHHHHHHHHHhCCCCceeEEEEE
Confidence            356999999999999999999999899999999984321             1234567889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +..+..+|+||||+++++|.+++.... ..+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||+
T Consensus        71 ~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~  149 (280)
T cd06611          71 YFYENKLWILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGV  149 (280)
T ss_pred             EecCCeEEEEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCcc
Confidence            999999999999999999999876543 4599999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        .......||+.|+|||
T Consensus       150 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~PE  173 (280)
T cd06611         150 SAKNKSTL--------------------------------------------------------QKRDTFIGTPYWMAPE  173 (280)
T ss_pred             chhhcccc--------------------------------------------------------cccceeecchhhcCHH
Confidence            76542110                                                        1122346899999999


Q ss_pred             hhc-----CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhccCCCCC
Q 014344          255 IIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       255 ~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      ++.     ...++.++|+|||||++|+|++|++||...+......++......    ....+..+.+||.+||..+|.+|
T Consensus       174 ~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  253 (280)
T cd06611         174 VVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDR  253 (280)
T ss_pred             HHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhC
Confidence            985     344678999999999999999999999988776666666543322    22456789999999999999999


Q ss_pred             CChHHHhcCCCcCCCC
Q 014344          326 IGVEEIKGHEFFKGVN  341 (426)
Q Consensus       326 ~s~~eil~hp~f~~~~  341 (426)
                      |++.++++||||....
T Consensus       254 ps~~~il~~~~~~~~~  269 (280)
T cd06611         254 PTAAELLKHPFVSDQS  269 (280)
T ss_pred             cCHHHHhcChhhcccc
Confidence            9999999999998654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-46  Score=361.28  Aligned_cols=253  Identities=24%  Similarity=0.349  Sum_probs=217.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .++++.+.+++++.||+|-||.||++.... ...||+|.+....              .....+.+|+.+|++|.|++||
T Consensus       200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~--------------m~~~~f~~Ea~iMk~L~H~~lV  264 (468)
T KOG0197|consen  200 PWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS--------------MSPEAFLREAQIMKKLRHEKLV  264 (468)
T ss_pred             CeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccc--------------cChhHHHHHHHHHHhCcccCeE
Confidence            466777889999999999999999999743 3479999884321              1234677899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++..+..+|||||||+.|+|.++++...+..+.......++.||+.|++||+++++|||||..+||||+++..+||
T Consensus       265 ~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKI  344 (468)
T KOG0197|consen  265 KLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKI  344 (468)
T ss_pred             EEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEE
Confidence            99999999899999999999999999998866677999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||||+......-..                                                       ....--...
T Consensus       345 sDFGLAr~~~d~~Y~~-------------------------------------------------------~~~~kfPIk  369 (468)
T KOG0197|consen  345 SDFGLARLIGDDEYTA-------------------------------------------------------SEGGKFPIK  369 (468)
T ss_pred             cccccccccCCCceee-------------------------------------------------------cCCCCCCce
Confidence            9999999543221100                                                       000113456


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |.|||++....++.+||||||||+||||.| |+.||.+.+..+....+..  +.+.+.++|+.+.++|..||..+|++||
T Consensus       370 WtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RP  449 (468)
T KOG0197|consen  370 WTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRP  449 (468)
T ss_pred             ecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCC
Confidence            999999999999999999999999999996 9999999999999988864  4466778899999999999999999999


Q ss_pred             ChHHHh
Q 014344          327 GVEEIK  332 (426)
Q Consensus       327 s~~eil  332 (426)
                      |++.+.
T Consensus       450 tF~~L~  455 (468)
T KOG0197|consen  450 TFETLR  455 (468)
T ss_pred             CHHHHH
Confidence            998664

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3e-46  Score=337.11  Aligned_cols=257  Identities=26%  Similarity=0.411  Sum_probs=213.8

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~  100 (426)
                      ..||+|+|+.|--+....+|..||||++.|.             ......++.+|++++.+++ |+||+.++++|+++..
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-------------~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~  150 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-------------PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR  150 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcC-------------CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence            6799999999999999999999999999654             2345678999999999996 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc---EEEeccccccc
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH---IMLVDFDLSTK  177 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~---ikL~DFgls~~  177 (426)
                      +|||||-+.||.|.+.+..+.  .|++.++..++++|+.||++||.+||+||||||+|||.....+   |||+||.+...
T Consensus       151 FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  151 FYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             EEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence            999999999999998887654  4999999999999999999999999999999999999986654   89999999876


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      +.......+                                                 .+.-...+.||+..|||||+..
T Consensus       229 ~k~~~~~sp-------------------------------------------------astP~L~tPvGSAEfMAPEVVd  259 (463)
T KOG0607|consen  229 IKLNNDCSP-------------------------------------------------ASTPELLTPVGSAEFMAPEVVD  259 (463)
T ss_pred             cccCCCCCC-------------------------------------------------CCCccccCcccchhhcchhHHh
Confidence            643322111                                                 0111234568999999999863


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHHhCCCCCCCCC---------------HHHHHHHHhcCCCCCC-----CCCHHHHH
Q 014344          258 -----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSS---------------RKETFYRILCRPPDLV-----GEPTPLRN  312 (426)
Q Consensus       258 -----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---------------~~~~~~~i~~~~~~~~-----~~~~~~~~  312 (426)
                           ..-|+.++|.||||||||-||.|.+||.|.-               ....|..|......++     ..+.+++|
T Consensus       260 ~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakd  339 (463)
T KOG0607|consen  260 VFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKD  339 (463)
T ss_pred             hhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHH
Confidence                 2458999999999999999999999997652               2234555554443333     34788999


Q ss_pred             HHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       313 li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                      ||..+|..|+.+|.++.++++|||++.+.-
T Consensus       340 lisnLlvrda~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  340 LISNLLVRDAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             HHHHHHhccHHhhhhhhhccCCccccccch
Confidence            999999999999999999999999987643

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.4e-45  Score=367.43  Aligned_cols=250  Identities=24%  Similarity=0.340  Sum_probs=202.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ...|.+.+.||+|+||.||+|.+..+++.||||...                   ...+.+|+++|++|+||||++++++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------------------~~~~~~E~~iL~~L~HpnIv~l~~~  228 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------------------YASSVHEARLLRRLSHPAVLALLDV  228 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------------------ccCHHHHHHHHHHCCCCCCCcEEEE
Confidence            457999999999999999999999999999999641                   1234569999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +......|+|||++. ++|..++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus       229 ~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGl  306 (461)
T PHA03211        229 RVVGGLTCLVLPKYR-SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGA  306 (461)
T ss_pred             EEECCEEEEEEEccC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCC
Confidence            999999999999995 78888776543 3599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      ++.+.....                                                      .......+||+.|+|||
T Consensus       307 a~~~~~~~~------------------------------------------------------~~~~~~~~GT~~Y~APE  332 (461)
T PHA03211        307 ACFARGSWS------------------------------------------------------TPFHYGIAGTVDTNAPE  332 (461)
T ss_pred             ceecccccc------------------------------------------------------cccccccCCCcCCcCHH
Confidence            876532110                                                      00112356999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcC----CCC---------------------
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-------KETFYRILCR----PPD---------------------  302 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-------~~~~~~i~~~----~~~---------------------  302 (426)
                      ++.+..++.++|||||||++|||++|..|+.....       ...+.+++..    ...                     
T Consensus       333 ~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  412 (461)
T PHA03211        333 VLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNR  412 (461)
T ss_pred             HHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhccc
Confidence            99999999999999999999999998765432210       1112222110    000                     


Q ss_pred             -----------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 -----------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 -----------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                 ....+..+.+||.+||+.||.+|||+.|||+||||+.
T Consensus       413 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        413 RPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             CCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                       0022346889999999999999999999999999964

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=4.6e-45  Score=345.84  Aligned_cols=254  Identities=34%  Similarity=0.614  Sum_probs=202.9

Q ss_pred             eecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHH---HHhcCCCCcceeeeeeecCC
Q 014344           23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV---LRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        23 ~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i---l~~l~hp~iv~l~~~~~~~~   99 (426)
                      .||+|+||.||+|.+..+++.||+|++.+......          ........|..+   +....||+|+.+++++..++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   70 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK----------QGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD   70 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccc----------hHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC
Confidence            48999999999999999999999999865432211          011222334433   33457999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCC
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                      ..|+||||+.|++|.+++...  +.+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++....
T Consensus        71 ~~~lv~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~  148 (279)
T cd05633          71 KLCFILDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (279)
T ss_pred             eEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence            999999999999999887654  349999999999999999999999999999999999999999999999999986542


Q ss_pred             CCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc-C
Q 014344          180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE-G  258 (426)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~  258 (426)
                      ..                                                          ......||+.|+|||.+. +
T Consensus       149 ~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~  170 (279)
T cd05633         149 KK----------------------------------------------------------KPHASVGTHGYMAPEVLQKG  170 (279)
T ss_pred             cc----------------------------------------------------------CccCcCCCcCccCHHHhcCC
Confidence            11                                                          011235899999999986 4


Q ss_pred             CCCChhhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH-hcCC-CCCCCCCHHHHHHHHHHhccCCCCCC-----ChH
Q 014344          259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR--KETFYRI-LCRP-PDLVGEPTPLRNLIRRLLEKDPTKRI-----GVE  329 (426)
Q Consensus       259 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i-~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~  329 (426)
                      ..++.++|+||+||++|+|++|..||.....  ....... .... ......+..+.++|.+||..||++|+     +++
T Consensus       171 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~  250 (279)
T cd05633         171 TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQ  250 (279)
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHH
Confidence            6689999999999999999999999975432  1222222 1111 22234578899999999999999999     699


Q ss_pred             HHhcCCCcCCCChhhhh
Q 014344          330 EIKGHEFFKGVNWELLL  346 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~  346 (426)
                      ++++||||++++|....
T Consensus       251 ~~~~h~~~~~~~~~~~~  267 (279)
T cd05633         251 EVKEHVFFKGIDWQQVY  267 (279)
T ss_pred             HHHhCccccCCCHhHHh
Confidence            99999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.6e-45  Score=345.48  Aligned_cols=252  Identities=25%  Similarity=0.441  Sum_probs=210.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~   94 (426)
                      +.|++.+.||+|+||.||+|.+..+++.||+|++....              .....+..|+.+++.+ +||||++++++
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--------------~~~~~~~~e~~~l~~~~~h~~i~~~~~~   71 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--------------DEEEEIKQEINMLKKYSHHRNIATYYGA   71 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--------------ccHHHHHHHHHHHHHhcCCCCeeeEeeE
Confidence            45899999999999999999999999999999984321              1234677799999998 69999999999


Q ss_pred             eecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +...      ..+|+||||+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++
T Consensus        72 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~  151 (272)
T cd06637          72 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK  151 (272)
T ss_pred             EeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEE
Confidence            8653      4689999999999999998775556699999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++.......                                                        .......|++
T Consensus       152 l~Dfg~~~~~~~~~--------------------------------------------------------~~~~~~~g~~  175 (272)
T cd06637         152 LVDFGVSAQLDRTV--------------------------------------------------------GRRNTFIGTP  175 (272)
T ss_pred             EccCCCceeccccc--------------------------------------------------------ccCCcccccc
Confidence            99999987543110                                                        1123456899


Q ss_pred             CCccchhhcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHhcc
Q 014344          249 EYVAPEIIEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       249 ~y~aPE~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~~L~~  320 (426)
                      .|+|||++.+     ..++.++|+||+||++|+|++|..||...........+.....   .....+..+.+||.+||..
T Consensus       176 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  255 (272)
T cd06637         176 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVK  255 (272)
T ss_pred             cccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCC
Confidence            9999999863     4578899999999999999999999987666555444432221   1224578899999999999


Q ss_pred             CCCCCCChHHHhcCCCc
Q 014344          321 DPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       321 dP~~R~s~~eil~hp~f  337 (426)
                      +|.+|||+.+++.||||
T Consensus       256 ~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         256 NHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             ChhhCCCHHHHhhCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=5.6e-45  Score=345.65  Aligned_cols=253  Identities=28%  Similarity=0.473  Sum_probs=208.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|++|.||+|++..+++.||+|++....           ......+.+..|+.+++.++||||+++++++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----------~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   69 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE-----------DDPVIKKIALREIRMLKQLKHPNLVNLIEVF   69 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecc-----------cCccccHHHHHHHHHHHhCCCCCEeeeeeEE
Confidence            46999999999999999999999999999999884321           1111234577899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+..+++||||+++++|..+....  ..+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++
T Consensus        70 ~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~  147 (286)
T cd07847          70 RRKRKLHLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFA  147 (286)
T ss_pred             eeCCEEEEEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccc
Confidence            9999999999999998888775433  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                        .......++..|+|||+
T Consensus       148 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~aPE~  171 (286)
T cd07847         148 RILTGPG--------------------------------------------------------DDYTDYVATRWYRAPEL  171 (286)
T ss_pred             eecCCCc--------------------------------------------------------ccccCcccccccCCHHH
Confidence            7653211                                                        01123357888999999


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----------------------CCC---------C
Q 014344          256 IEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-----------------------RPP---------D  302 (426)
Q Consensus       256 ~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-----------------------~~~---------~  302 (426)
                      +.+ ..++.++|+|||||++|+|++|.+||.+.+..+....+..                       .+.         .
T Consensus       172 ~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (286)
T cd07847         172 LVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESK  251 (286)
T ss_pred             HhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHH
Confidence            876 4578999999999999999999999988776544433211                       000         0


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ....+..+.+||.+||..+|++||++.|++.||||
T Consensus       252 ~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         252 FPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             hccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            12346778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=2.3e-45  Score=348.18  Aligned_cols=252  Identities=27%  Similarity=0.425  Sum_probs=203.8

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||+|+||.||+|++..+|+.||+|++.....           .......+..|+.+++.++||||+++++++.
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-----------~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~   69 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-----------DEGVPSSALREICLLKELKHKNIVRLYDVLH   69 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-----------cccCccchhHHHHHHHhcCCCCeeeHHHHhc
Confidence            48999999999999999999999999999999854321           1112345677999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      +...+|+|+||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus        70 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~  147 (284)
T cd07839          70 SDKKLTLVFEYCD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLAR  147 (284)
T ss_pred             cCCceEEEEecCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhh
Confidence            9999999999997 57877765433 459999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+....                                                        .......+++.|+|||++
T Consensus       148 ~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~~  171 (284)
T cd07839         148 AFGIPV--------------------------------------------------------RCYSAEVVTLWYRPPDVL  171 (284)
T ss_pred             ccCCCC--------------------------------------------------------CCcCCCccccCCcChHHH
Confidence            543110                                                        011223578899999998


Q ss_pred             cCC-CCChhhHHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHhcC---------------C---------------CCCC
Q 014344          257 EGK-GHDFAVDWWSLGVVLHEMLYGATPF-RGSSRKETFYRILCR---------------P---------------PDLV  304 (426)
Q Consensus       257 ~~~-~~~~~~DiwSlG~il~ell~g~~pf-~~~~~~~~~~~i~~~---------------~---------------~~~~  304 (426)
                      .+. .++.++|||||||++|+|++|..|| .+.+..+.+..+...               +               ....
T Consensus       172 ~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
T cd07839         172 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVP  251 (284)
T ss_pred             hCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcc
Confidence            774 4689999999999999999988875 444444433332110               0               0011


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ..+..+++||++||+.||.+|||+++++.||||
T Consensus       252 ~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         252 KLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             cCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            346778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=7.7e-45  Score=347.23  Aligned_cols=252  Identities=25%  Similarity=0.424  Sum_probs=214.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++++.||+|+||.||+|.+..+++.||+|.+.....             .....+..|+.+++.++||||+++++.|
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-------------~~~~~~~~e~~~l~~~~h~~v~~~~~~~   86 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-------------PKKELIINEILVMRENKNPNIVNYLDSY   86 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc-------------chHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            579999999999999999999999999999999854321             1235677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ......|+||||++|++|.+++..   ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++
T Consensus        87 ~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~  163 (296)
T cd06654          87 LVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC  163 (296)
T ss_pred             EeCCEEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccc
Confidence            999999999999999999998764   24889999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        .......|++.|+|||.
T Consensus       164 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  187 (296)
T cd06654         164 AQITPEQ--------------------------------------------------------SKRSTMVGTPYWMAPEV  187 (296)
T ss_pred             hhccccc--------------------------------------------------------cccCcccCCccccCHHH
Confidence            7543211                                                        01123358899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----CCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..++.++|+|||||++|+|++|+.||...+.......+.....    .....+..+.+||.+||..+|++||++.+|
T Consensus       188 ~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ei  267 (296)
T cd06654         188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL  267 (296)
T ss_pred             HcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHH
Confidence            9998899999999999999999999999988776554444332221    122346789999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      +.||||..
T Consensus       268 l~~~~~~~  275 (296)
T cd06654         268 LQHQFLKI  275 (296)
T ss_pred             hhChhhhc
Confidence            99999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=7.2e-45  Score=344.28  Aligned_cols=259  Identities=32%  Similarity=0.583  Sum_probs=208.4

Q ss_pred             eecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHH---HHHHHhcCCCCcceeeeeeecCC
Q 014344           23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE---QRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        23 ~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E---~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      .||+|+||.||+|.+..+++.||+|++.+......          ........|   ..+++...||+|+.++++|....
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   70 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK----------QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD   70 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccc----------hhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence            48999999999999999999999999865432211          011112223   34455568999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCC
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                      ..|+||||+.|++|..++...  ..+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++..+.
T Consensus        71 ~~~~v~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606          71 KLSFILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (278)
T ss_pred             EEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence            999999999999999887653  459999999999999999999999999999999999999999999999999986542


Q ss_pred             CCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC-
Q 014344          180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG-  258 (426)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  258 (426)
                      ..                                                          .....+|++.|+|||++.+ 
T Consensus       149 ~~----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~  170 (278)
T cd05606         149 KK----------------------------------------------------------KPHASVGTHGYMAPEVLQKG  170 (278)
T ss_pred             cc----------------------------------------------------------CCcCcCCCcCCcCcHHhcCC
Confidence            11                                                          1122358999999999975 


Q ss_pred             CCCChhhHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCC-CCCCCCHHHHHHHHHHhccCCCCCC-----ChH
Q 014344          259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPP-DLVGEPTPLRNLIRRLLEKDPTKRI-----GVE  329 (426)
Q Consensus       259 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~-----s~~  329 (426)
                      ..++.++|+||+||++|+|++|+.||....   .......+..... .....+..+.++|.+||..+|.+|+     ++.
T Consensus       171 ~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~  250 (278)
T cd05606         171 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQ  250 (278)
T ss_pred             CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHH
Confidence            468999999999999999999999998763   2333333322222 2224578899999999999999999     999


Q ss_pred             HHhcCCCcCCCChhhhhhccCC
Q 014344          330 EIKGHEFFKGVNWELLLKISRP  351 (426)
Q Consensus       330 eil~hp~f~~~~~~~~~~~~~~  351 (426)
                      ++++||||++.+|..+.....|
T Consensus       251 ~ll~~~~~~~~~~~~~~~~~~~  272 (278)
T cd05606         251 EVKEHPFFRSLDWQMVFLQKYP  272 (278)
T ss_pred             HHHhCccccCCCchHhhhcccC
Confidence            9999999999999988655444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.5e-45  Score=344.89  Aligned_cols=253  Identities=24%  Similarity=0.450  Sum_probs=210.1

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++....             ......+.+|+.+++.++||||++++
T Consensus         6 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-------------~~~~~~~~~e~~~~~~l~h~~ii~~~   72 (267)
T cd06645           6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-------------GEDFAVVQQEIIMMKDCKHSNIVAYF   72 (267)
T ss_pred             CcHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc-------------hhHHHHHHHHHHHHHhCCCCCeeeEE
Confidence            44568999999999999999999999999999999984321             11234577899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++.....+|+||||+++++|.+++...  +.+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+||
T Consensus        73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~df  150 (267)
T cd06645          73 GSYLRRDKLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADF  150 (267)
T ss_pred             EEEEeCCEEEEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcc
Confidence            9999999999999999999999987654  35999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+....                                                        .......||+.|+|
T Consensus       151 g~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~a  174 (267)
T cd06645         151 GVSAQITATI--------------------------------------------------------AKRKSFIGTPYWMA  174 (267)
T ss_pred             eeeeEccCcc--------------------------------------------------------cccccccCcccccC
Confidence            9987553110                                                        01123468999999


Q ss_pred             chhhc---CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCC---CCCCCHHHHHHHHHHhccCCC
Q 014344          253 PEIIE---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPD---LVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       253 PE~~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~~---~~~~~~~~~~li~~~L~~dP~  323 (426)
                      ||++.   ...++.++|+|||||++|+|++|..||...............   ++.   ....+..+.+||.+||..+|+
T Consensus       175 PE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  254 (267)
T cd06645         175 PEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPK  254 (267)
T ss_pred             hhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCch
Confidence            99985   455788999999999999999999999765544333322211   111   123467799999999999999


Q ss_pred             CCCChHHHhcCCC
Q 014344          324 KRIGVEEIKGHEF  336 (426)
Q Consensus       324 ~R~s~~eil~hp~  336 (426)
                      +||++++|++|||
T Consensus       255 ~R~~~~~ll~~~~  267 (267)
T cd06645         255 KRPTAEKLLQHPF  267 (267)
T ss_pred             hCcCHHHHhcCCC
Confidence            9999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=5.6e-45  Score=341.48  Aligned_cols=251  Identities=40%  Similarity=0.723  Sum_probs=214.9

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEE
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGY  103 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l  103 (426)
                      ||.|++|.||+|++..+++.||+|++.+.....          ....+.+.+|+.+++.++||||+++++.+.++..+|+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   70 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE----------TGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYM   70 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchh----------hhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEE
Confidence            799999999999999999999999996543221          1234678889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCC
Q 014344          104 AIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP  183 (426)
Q Consensus       104 V~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~  183 (426)
                      ||||++|++|.+++...  ..+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++....... 
T Consensus        71 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-  147 (262)
T cd05572          71 LMEYCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-  147 (262)
T ss_pred             EEecCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-
Confidence            99999999999988754  348999999999999999999999999999999999999999999999999987653210 


Q ss_pred             CCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCCh
Q 014344          184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF  263 (426)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  263 (426)
                                                                              ......|++.|+|||.+.+..++.
T Consensus       148 --------------------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~  171 (262)
T cd05572         148 --------------------------------------------------------KTWTFCGTPEYVAPEIILNKGYDF  171 (262)
T ss_pred             --------------------------------------------------------ccccccCCcCccChhHhcCCCCCC
Confidence                                                                    122345889999999998888999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhc--CC-CCCCCCCHHHHHHHHHHhccCCCCCCC-----hHHHhc
Q 014344          264 AVDWWSLGVVLHEMLYGATPFRGSS--RKETFYRILC--RP-PDLVGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKG  333 (426)
Q Consensus       264 ~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~i~~--~~-~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~eil~  333 (426)
                      ++|+||+||++|+|++|..||....  ..+.+..+..  .. ......+..+.++|.+||+.+|++|++     ++|+++
T Consensus       172 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         172 SVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             hhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            9999999999999999999998777  5555665552  22 222234688999999999999999999     999999


Q ss_pred             CCCcCCCChh
Q 014344          334 HEFFKGVNWE  343 (426)
Q Consensus       334 hp~f~~~~~~  343 (426)
                      ||||++.+|+
T Consensus       252 ~~~~~~~~~~  261 (262)
T cd05572         252 HKWFNGFDWE  261 (262)
T ss_pred             ChhhhCCCCC
Confidence            9999999886

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=9e-45  Score=338.78  Aligned_cols=254  Identities=28%  Similarity=0.448  Sum_probs=218.8

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||+|+||.||++.+..+++.||+|.+.......           .....+.+|+.+++.++||||+++++++.
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-----------KEREESRKEVAVLSNMKHPNIVQYQESFE   69 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-----------HHHHHHHHHHHHHHhCCCCCeeeeEeeec
Confidence            5999999999999999999999999999999985432211           23457788999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .....|+||||+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++.
T Consensus        70 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~  149 (256)
T cd08218          70 ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIAR  149 (256)
T ss_pred             CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeecccee
Confidence            99999999999999999998876554568999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                        .......|++.|+|||++
T Consensus       150 ~~~~~~--------------------------------------------------------~~~~~~~~~~~~~~pe~~  173 (256)
T cd08218         150 VLNSTV--------------------------------------------------------ELARTCIGTPYYLSPEIC  173 (256)
T ss_pred             ecCcch--------------------------------------------------------hhhhhccCCccccCHHHh
Confidence            653210                                                        011233588899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+..++.++|+|||||++|+|++|..||...+..+....++...  +.....+..+.++|.+||..+|.+||++.+++.|
T Consensus       174 ~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         174 ENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            98889999999999999999999999999888777776665432  2233457889999999999999999999999999


Q ss_pred             CCc
Q 014344          335 EFF  337 (426)
Q Consensus       335 p~f  337 (426)
                      |||
T Consensus       254 ~~~  256 (256)
T cd08218         254 NFI  256 (256)
T ss_pred             cCC
Confidence            997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.5e-44  Score=337.37  Aligned_cols=254  Identities=26%  Similarity=0.401  Sum_probs=219.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||.|+||.||.+++..+++.+++|.+......           ......+.+|+.++++++|+||+++++++.
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~   69 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-----------EKERRDALNEIVILSLLQHPNIIAYYNHFM   69 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-----------hhHHHHHHHHHHHHHhCCCCCeeEEEeEEe
Confidence            599999999999999999999999999999998543221           123456788999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ....++++||||+|++|.+++.......+++..+..++.|++.||.|||+.|++||||+|+||+++.++.+||+|||++.
T Consensus        70 ~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~  149 (256)
T cd08221          70 DDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISK  149 (256)
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceE
Confidence            99999999999999999999876655568999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                        .......|++.|+|||.+
T Consensus       150 ~~~~~~--------------------------------------------------------~~~~~~~~~~~y~ape~~  173 (256)
T cd08221         150 ILGSEY--------------------------------------------------------SMAETVVGTPYYMSPELC  173 (256)
T ss_pred             Eccccc--------------------------------------------------------ccccccCCCccccCHhhc
Confidence            653211                                                        012234589999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+..++.++|+|||||++|+|++|..||...+..+....+.....  .....+..+.++|.+||..+|.+||++.++++|
T Consensus       174 ~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         174 QGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            988889999999999999999999999998888777777654322  223457889999999999999999999999999


Q ss_pred             CCc
Q 014344          335 EFF  337 (426)
Q Consensus       335 p~f  337 (426)
                      ||+
T Consensus       254 ~~l  256 (256)
T cd08221         254 PLL  256 (256)
T ss_pred             cCC
Confidence            986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1e-44  Score=346.43  Aligned_cols=253  Identities=26%  Similarity=0.425  Sum_probs=216.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++++.||.|++|.||+|.+..+++.||+|.+....             ......+..|+.+++.++||||+++++.+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   85 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK-------------QPKKELIINEILVMKELKNPNIVNFLDSF   85 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc-------------CchHHHHHHHHHHHHhcCCCceeeeeeeE
Confidence            56999999999999999999999999999999884321             12345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .....+|+|+||++|++|..++...   .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++
T Consensus        86 ~~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~  162 (296)
T cd06655          86 LVGDELFVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFC  162 (296)
T ss_pred             ecCceEEEEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccc
Confidence            9999999999999999999987642   4899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        .......|++.|+|||.
T Consensus       163 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  186 (296)
T cd06655         163 AQITPEQ--------------------------------------------------------SKRSTMVGTPYWMAPEV  186 (296)
T ss_pred             hhccccc--------------------------------------------------------ccCCCcCCCccccCcch
Confidence            7653211                                                        01123358899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----CCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..++.++|+|||||++|+|++|+.||.+.+.......+.....    .....++.+.+||.+||..||.+||++.+|
T Consensus       187 ~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~i  266 (296)
T cd06655         187 VTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKEL  266 (296)
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence            9998899999999999999999999999998877655544432211    223457789999999999999999999999


Q ss_pred             hcCCCcCCC
Q 014344          332 KGHEFFKGV  340 (426)
Q Consensus       332 l~hp~f~~~  340 (426)
                      +.||||+..
T Consensus       267 l~~~~~~~~  275 (296)
T cd06655         267 LQHPFLKLA  275 (296)
T ss_pred             hhChHhhhc
Confidence            999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=6.4e-45  Score=345.04  Aligned_cols=252  Identities=27%  Similarity=0.443  Sum_probs=213.1

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |++++.||.|+||.||++.+..++..+|+|.+....             ......+..|+.+++.++||||+++++.+..
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~   73 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-------------EEELEDYMVEIDILASCDHPNIVKLLDAFYY   73 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-------------HHHHHHHHHHHHHHHHCCCCCeeeEEEEEee
Confidence            689999999999999999999999999999984321             1234567789999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      +...|+||||+++++|..++... ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++..
T Consensus        74 ~~~~~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~  152 (282)
T cd06643          74 ENNLWILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAK  152 (282)
T ss_pred             CCEEEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccc
Confidence            99999999999999998876543 34589999999999999999999999999999999999999999999999999865


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      .....                                                        .......||+.|+|||++.
T Consensus       153 ~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~~~  176 (282)
T cd06643         153 NTRTI--------------------------------------------------------QRRDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             ccccc--------------------------------------------------------cccccccccccccCHhhcc
Confidence            42110                                                        1122346899999999984


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----CCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          258 -----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP----DLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       258 -----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                           +..++.++|+||+||++|+|++|.+||...+..+....+.....    .....+..+.+||.+||..||.+||++
T Consensus       177 ~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  256 (282)
T cd06643         177 CETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTT  256 (282)
T ss_pred             ccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCH
Confidence                 34577899999999999999999999998877766665543321    122457789999999999999999999


Q ss_pred             HHHhcCCCcCC
Q 014344          329 EEIKGHEFFKG  339 (426)
Q Consensus       329 ~eil~hp~f~~  339 (426)
                      .++++||||+.
T Consensus       257 ~~il~~~~~~~  267 (282)
T cd06643         257 TQLLQHPFVTV  267 (282)
T ss_pred             HHHhcCCCEec
Confidence            99999999974

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.1e-44  Score=343.72  Aligned_cols=254  Identities=28%  Similarity=0.486  Sum_probs=212.4

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||.|+||.||+|.+..+++.||+|++......           ......+..|+.+++.++||||+++++++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-----------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   69 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-----------GGIPNQALREIKALQACQHPYVVKLLDVFP   69 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-----------chhhHHHHHHHHHHHhCCCCCCcceeeEEe
Confidence            589999999999999999999999999999998543211           123457888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ....+|+||||+ |++|.+++.... ..+++..++.++.||+.||+|||+.|++||||||+||+++.++.++|+|||++.
T Consensus        70 ~~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~  147 (286)
T cd07832          70 HGSGFVLVMEYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLAR  147 (286)
T ss_pred             cCCeeEEEeccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence            999999999999 999999876544 559999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .......                                                       .......|+..|+|||++
T Consensus       148 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~  172 (286)
T cd07832         148 LFSEEEP-------------------------------------------------------RLYSHQVATRWYRAPELL  172 (286)
T ss_pred             cccCCCC-------------------------------------------------------CccccccCcccccCceee
Confidence            6532110                                                       011233589999999998


Q ss_pred             cCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-------------------------------CCC
Q 014344          257 EGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-------------------------------DLV  304 (426)
Q Consensus       257 ~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-------------------------------~~~  304 (426)
                      .+. .++.++||||+||++|+|++|.+||.+.+....+..++....                               ...
T Consensus       173 ~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (286)
T cd07832         173 YGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFP  252 (286)
T ss_pred             eccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCC
Confidence            754 468999999999999999999999988776665544432100                               012


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                      ..+..+.+||++||..+|++|||+++++.||||.
T Consensus       253 ~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         253 DASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            3457789999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.3e-45  Score=343.09  Aligned_cols=255  Identities=29%  Similarity=0.512  Sum_probs=218.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||.|++|.||+|.+..+++.||+|++....            .......+.+|+.+++.++||||+++++.+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE------------AEDEIEDIQQEIQFLSQCRSPYITKYYGSF   68 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc------------cchHHHHHHHHHHHHHHcCCCCeeeeeEEE
Confidence            46999999999999999999999999999999985331            112345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+..+|+|+||+++++|.+++...   .+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++
T Consensus        69 ~~~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~  145 (274)
T cd06609          69 LKGSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVS  145 (274)
T ss_pred             EECCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccc
Confidence            9999999999999999999987753   5899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                        .......|++.|+|||.
T Consensus       146 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~PE~  169 (274)
T cd06609         146 GQLTSTM--------------------------------------------------------SKRNTFVGTPFWMAPEV  169 (274)
T ss_pred             eeecccc--------------------------------------------------------cccccccCCccccChhh
Confidence            7764211                                                        11223468899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCC--CCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PDLV--GEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~--~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      +.+..++.++|||||||++|+|++|..||...+.......+.... +...  ..+..+.++|.+||..+|++|||+++++
T Consensus       170 ~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il  249 (274)
T cd06609         170 IKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELL  249 (274)
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence            999889999999999999999999999998877666555444332 2222  1577899999999999999999999999


Q ss_pred             cCCCcCCCC
Q 014344          333 GHEFFKGVN  341 (426)
Q Consensus       333 ~hp~f~~~~  341 (426)
                      +||||+...
T Consensus       250 ~~~~~~~~~  258 (274)
T cd06609         250 KHKFIKKAK  258 (274)
T ss_pred             hChhhcCCC
Confidence            999998653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=2.2e-44  Score=342.54  Aligned_cols=266  Identities=21%  Similarity=0.276  Sum_probs=216.2

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      |.+..++|++++.||+|+||.||+|.++.     .+..||+|.+....            .......+..|+.+++.++|
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~e~~~l~~l~~   68 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA------------SLRERIEFLNEASVMKGFTC   68 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC------------CHHHHHHHHHHHHHHHhCCC
Confidence            34567789999999999999999997642     34579999874321            11123457789999999999


Q ss_pred             CCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCC
Q 014344           86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPE  157 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~  157 (426)
                      |||+++++++......|+||||+++|+|.+++....        ...++...+..++.||+.||.|||++||+||||||+
T Consensus        69 ~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~  148 (288)
T cd05061          69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAAR  148 (288)
T ss_pred             CCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChh
Confidence            999999999999999999999999999999987532        123466788899999999999999999999999999


Q ss_pred             CeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          158 NIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDS  237 (426)
Q Consensus       158 NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (426)
                      |||++.++.++|+|||+++.......                                                      
T Consensus       149 nili~~~~~~~L~Dfg~~~~~~~~~~------------------------------------------------------  174 (288)
T cd05061         149 NCMVAHDFTVKIGDFGMTRDIYETDY------------------------------------------------------  174 (288)
T ss_pred             eEEEcCCCcEEECcCCcccccccccc------------------------------------------------------
Confidence            99999999999999999875432110                                                      


Q ss_pred             CCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHH
Q 014344          238 SEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLI  314 (426)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li  314 (426)
                      ........++..|+|||.+.+..++.++|+|||||++|||++ |..||.+....+....+....  ......+..+.++|
T Consensus       175 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  254 (288)
T cd05061         175 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM  254 (288)
T ss_pred             ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            000112235678999999999889999999999999999998 899999887776665554321  22334578899999


Q ss_pred             HHHhccCCCCCCChHHHhc------CCCcCCCCh
Q 014344          315 RRLLEKDPTKRIGVEEIKG------HEFFKGVNW  342 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~------hp~f~~~~~  342 (426)
                      .+||+.||++|||+.++++      ||||.+++|
T Consensus       255 ~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         255 RMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             HHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence            9999999999999999986      999999998

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.1e-44  Score=340.27  Aligned_cols=265  Identities=24%  Similarity=0.417  Sum_probs=217.4

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|.+.+.||+|++|.||+|.+..+++.||+|.+.........    ........+.+..|+.++++++||||+++++++.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~----~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASS----KDRKRSMLDALAREIALLKELQHENIVQYLGSSL   76 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccch----hHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE
Confidence            478899999999999999999999999999988543221110    0001123467888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .....++||||+++++|.+++...  +.+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++.
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628          77 DADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             eCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence            999999999999999999998764  348999999999999999999999999999999999999999999999999988


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .........                                                  ........+.|++.|+|||.+
T Consensus       155 ~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~~~y~~pe~~  184 (267)
T cd06628         155 KLEANSLST--------------------------------------------------KTNGARPSLQGSVFWMAPEVV  184 (267)
T ss_pred             ccccccccC--------------------------------------------------CccccccccCCCcCccChhHh
Confidence            664211000                                                  000112234588999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+..++.++|+|||||++|+|++|+.||...+.......+...  +......+..+.++|++||+.||.+||++.+|+.|
T Consensus       185 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         185 KQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             ccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            9988999999999999999999999999987766555554332  22233457889999999999999999999999999


Q ss_pred             CCc
Q 014344          335 EFF  337 (426)
Q Consensus       335 p~f  337 (426)
                      |||
T Consensus       265 ~~~  267 (267)
T cd06628         265 PFL  267 (267)
T ss_pred             CCC
Confidence            997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=7.2e-45  Score=344.59  Aligned_cols=254  Identities=26%  Similarity=0.444  Sum_probs=211.3

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      ..+.|++.+.||.|+||.||+|.+..+++.+|+|++....              .....+..|+.+++.+ +||||++++
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--------------~~~~~~~~e~~~l~~~~~h~~i~~~~   79 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--------------DEEEEIKLEINMLKKYSHHRNIATYY   79 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--------------HHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            3468999999999999999999999999999999984421              1234567789999998 699999999


Q ss_pred             eeee------cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           93 GVLS------TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        93 ~~~~------~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      +++.      ....+|++|||+.+|+|.+++.......+++..+..++.||+.||.|||+.||+||||||+||+++.++.
T Consensus        80 ~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~  159 (282)
T cd06636          80 GAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAE  159 (282)
T ss_pred             eehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC
Confidence            9984      3568899999999999999987766566899999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      ++|+|||++.......                                                        ......+|
T Consensus       160 ~~l~dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~  183 (282)
T cd06636         160 VKLVDFGVSAQLDRTV--------------------------------------------------------GRRNTFIG  183 (282)
T ss_pred             EEEeeCcchhhhhccc--------------------------------------------------------cCCCcccc
Confidence            9999999987542110                                                        11223468


Q ss_pred             CCCCccchhhc-----CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---CCCCCHHHHHHHHHHh
Q 014344          247 TEEYVAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD---LVGEPTPLRNLIRRLL  318 (426)
Q Consensus       247 t~~y~aPE~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~~li~~~L  318 (426)
                      ++.|+|||++.     ...++.++|+|||||++|+|++|..||...........+......   ....+..+.+||++||
T Consensus       184 ~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  263 (282)
T cd06636         184 TPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCL  263 (282)
T ss_pred             cccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHh
Confidence            99999999986     345788999999999999999999999877665544443322211   1245788999999999


Q ss_pred             ccCCCCCCChHHHhcCCCc
Q 014344          319 EKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       319 ~~dP~~R~s~~eil~hp~f  337 (426)
                      ..||.+||++.||++||||
T Consensus       264 ~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         264 VKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             CCChhhCcCHHHHhcCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=7.2e-45  Score=341.73  Aligned_cols=252  Identities=25%  Similarity=0.436  Sum_probs=208.8

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ...+|++++.||+|+||.||+|++..+++.||+|++....             ......+..|+.+++.++||||+++++
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-------------~~~~~~~~~e~~~l~~~~h~~ii~~~~   73 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP-------------GDDFSLIQQEIFMVKECKHCNIVAYFG   73 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc-------------cchHHHHHHHHHHHHhcCCCCeeeeeE
Confidence            4567999999999999999999999999999999984321             112345778999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++..+..+|+||||+++++|.+++...  ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg  151 (267)
T cd06646          74 SYLSREKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFG  151 (267)
T ss_pred             EEEeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCc
Confidence            999999999999999999999987654  358999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++..+....                                                        .......|++.|+||
T Consensus       152 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~P  175 (267)
T cd06646         152 VAAKITATI--------------------------------------------------------AKRKSFIGTPYWMAP  175 (267)
T ss_pred             cceeecccc--------------------------------------------------------cccCccccCccccCH
Confidence            987653110                                                        011234588999999


Q ss_pred             hhhc---CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCC---CCCCCHHHHHHHHHHhccCCCC
Q 014344          254 EIIE---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPD---LVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       254 E~~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~~---~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      |.+.   ...++.++|+||+||++|+|++|..||...........+...   ++.   ....+..+.+||++||..+|++
T Consensus       176 E~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  255 (267)
T cd06646         176 EVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKK  255 (267)
T ss_pred             hHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhh
Confidence            9985   344778999999999999999999999766544433222111   111   1234678999999999999999


Q ss_pred             CCChHHHhcCCC
Q 014344          325 RIGVEEIKGHEF  336 (426)
Q Consensus       325 R~s~~eil~hp~  336 (426)
                      |||+++|++|+|
T Consensus       256 Rp~~~~il~~l~  267 (267)
T cd06646         256 RPTAERLLTHLF  267 (267)
T ss_pred             CcCHHHHhcCCC
Confidence            999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=1.7e-44  Score=336.64  Aligned_cols=253  Identities=28%  Similarity=0.415  Sum_probs=218.0

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+.....           .......+..|+.+|+.++||||+++++.+.
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   69 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-----------TKDERLAAQNECQVLKLLSHPNIIEYYENFL   69 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-----------ccHHHHHHHHHHHHHhhCCCCchhheeeeEe
Confidence            59999999999999999999999999999999854321           1234567888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-cEEEeccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-HIMLVDFDLS  175 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-~ikL~DFgls  175 (426)
                      .....++||||++|++|.+++.......+++..+..++.|++.||+|||++||+||||||+||+++.++ .++|+|||++
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~  149 (256)
T cd08220          70 EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGIS  149 (256)
T ss_pred             cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCc
Confidence            999999999999999999998776555689999999999999999999999999999999999998654 6899999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                         ......|++.|+|||.
T Consensus       150 ~~~~~~~---------------------------------------------------------~~~~~~~~~~y~aPE~  172 (256)
T cd08220         150 KILSSKS---------------------------------------------------------KAYTVVGTPCYISPEL  172 (256)
T ss_pred             eecCCCc---------------------------------------------------------cccccccCCcccCchh
Confidence            7653211                                                         1122358889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+..++.++|+|||||++|+|++|..||...+.......+.....  .....+..+.++|.+||..+|++|||+.++++
T Consensus       173 ~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         173 CEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             ccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            9988889999999999999999999999998887777666654332  22345788999999999999999999999999


Q ss_pred             CCCc
Q 014344          334 HEFF  337 (426)
Q Consensus       334 hp~f  337 (426)
                      ||||
T Consensus       253 ~p~~  256 (256)
T cd08220         253 QPIC  256 (256)
T ss_pred             CCCC
Confidence            9996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-45  Score=339.63  Aligned_cols=251  Identities=37%  Similarity=0.639  Sum_probs=209.3

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHH-HhcCCCCcceeeeeeecCC
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-RNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il-~~l~hp~iv~l~~~~~~~~   99 (426)
                      ++.||.|+||.||+|.+..+++.||+|++.+......          .....+..|..++ ..++|||++++++++...+
T Consensus         1 ~~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~   70 (260)
T cd05611           1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAK----------NQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD   70 (260)
T ss_pred             CccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHH----------HHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC
Confidence            3579999999999999999999999999865432211          1122334454444 4558999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCC
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                      .+|+||||++|++|.+++...  +.+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++....
T Consensus        71 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  148 (260)
T cd05611          71 YLYLVMEYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL  148 (260)
T ss_pred             eEEEEEeccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceecc
Confidence            999999999999999998754  348999999999999999999999999999999999999999999999999876432


Q ss_pred             CCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCC
Q 014344          180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK  259 (426)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  259 (426)
                      .                                                            .....|++.|+|||.+.+.
T Consensus       149 ~------------------------------------------------------------~~~~~~~~~y~~pe~~~~~  168 (260)
T cd05611         149 E------------------------------------------------------------NKKFVGTPDYLAPETILGV  168 (260)
T ss_pred             c------------------------------------------------------------cccCCCCcCccChhhhcCC
Confidence            1                                                            1233588899999999988


Q ss_pred             CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHhccCCCCCCCh---HHH
Q 014344          260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----DLVGEPTPLRNLIRRLLEKDPTKRIGV---EEI  331 (426)
Q Consensus       260 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~li~~~L~~dP~~R~s~---~ei  331 (426)
                      .++.++||||||+++|+|++|..||...+....+..+.....     .....+..+.++|.+||+.+|++||++   +|+
T Consensus       169 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~  248 (260)
T cd05611         169 GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI  248 (260)
T ss_pred             CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence            899999999999999999999999998887777666543321     122457889999999999999999954   799


Q ss_pred             hcCCCcCCCChh
Q 014344          332 KGHEFFKGVNWE  343 (426)
Q Consensus       332 l~hp~f~~~~~~  343 (426)
                      +.||||+.++|+
T Consensus       249 l~~~~~~~~~~~  260 (260)
T cd05611         249 KSHPFFKSINWD  260 (260)
T ss_pred             HcChHhhcCCCC
Confidence            999999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.3e-44  Score=339.57  Aligned_cols=261  Identities=23%  Similarity=0.376  Sum_probs=213.6

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|+||.||+|.+ .+++.+|+|.+........       ........+..|+.+++.++|+||+++++++.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~-------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   72 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVL-------AAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL   72 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchh-------hHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee
Confidence            488999999999999999986 5788999998854321110       11123467888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ....+|+||||++|++|.+++....  .+++..+..++.|++.||+|||+.||+|+||+|+||+++.++.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  150 (265)
T cd06631          73 DDNTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCAR  150 (265)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhH
Confidence            9999999999999999999986543  48999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .........                                                  ..........|+..|+|||++
T Consensus       151 ~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~~~~~~pe~~  180 (265)
T cd06631         151 RLAWVGLHG--------------------------------------------------THSNMLKSMHGTPYWMAPEVI  180 (265)
T ss_pred             hhhhccccc--------------------------------------------------cccccccccCCCccccChhhh
Confidence            653111000                                                  000112234589999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      .+..++.++|+|||||++|+|++|..||...+.......+...    +......+..+.+||++||..+|.+||++.+++
T Consensus       181 ~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l  260 (265)
T cd06631         181 NESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLL  260 (265)
T ss_pred             cCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence            9999999999999999999999999999877665544443322    223334578899999999999999999999999


Q ss_pred             cCCCc
Q 014344          333 GHEFF  337 (426)
Q Consensus       333 ~hp~f  337 (426)
                      .||||
T Consensus       261 ~~~~~  265 (265)
T cd06631         261 RHDFL  265 (265)
T ss_pred             cCCCC
Confidence            99997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=9.9e-45  Score=346.67  Aligned_cols=252  Identities=25%  Similarity=0.431  Sum_probs=212.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++++.||+|+||.||+|.+..+++.||+|.+....             ......+..|+.+++.++||||+++++.+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   85 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ-------------QPKKELIINEILVMRENKNPNIVNYLDSY   85 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc-------------cchHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            67999999999999999999999999999999984321             11235677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ......|+||||++|++|.+++..   ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++
T Consensus        86 ~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~  162 (297)
T cd06656          86 LVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC  162 (297)
T ss_pred             ecCCEEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccc
Confidence            999999999999999999998764   34889999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        .......|++.|+|||.
T Consensus       163 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  186 (297)
T cd06656         163 AQITPEQ--------------------------------------------------------SKRSTMVGTPYWMAPEV  186 (297)
T ss_pred             eEccCCc--------------------------------------------------------cCcCcccCCccccCHHH
Confidence            7543211                                                        01123358899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-C---CCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-P---DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~---~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..++.++|+|||||++|+|++|..||...+.......+.... +   .....+..+.+||.+||..+|.+||+++++
T Consensus       187 ~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  266 (297)
T cd06656         187 VTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKEL  266 (297)
T ss_pred             HcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            999889999999999999999999999998776544333222211 1   122346778999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      +.||||+.
T Consensus       267 l~~~~~~~  274 (297)
T cd06656         267 LQHPFLKL  274 (297)
T ss_pred             hcCchhcc
Confidence            99999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.2e-46  Score=355.11  Aligned_cols=259  Identities=26%  Similarity=0.430  Sum_probs=205.9

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcce
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPR   90 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~   90 (426)
                      .++-..|++++.||+||.+.||+|..- ..+.||+|.+.-.           ..+.....-+..|+.+|.+|+ |..||.
T Consensus       357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~-----------~~D~qtl~gy~nEI~lL~KLkg~~~IIq  424 (677)
T KOG0596|consen  357 KVKGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLL-----------EADNQTLDGYRNEIALLNKLKGHDKIIQ  424 (677)
T ss_pred             EECcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHh-----------hcCHHHHHHHHHHHHHHHHhcCCceEEE
Confidence            456678999999999999999999863 3456666655221           123345678899999999997 899999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ++++-..++++|+||||= ..||..+++.... ..+.-.+++|..||+.|++++|++||||.||||.|+|+- .|.+||+
T Consensus       425 L~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLI  501 (677)
T KOG0596|consen  425 LYDYEVTDGYLYMVMECG-DIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLI  501 (677)
T ss_pred             EeeeeccCceEEEEeecc-cccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEee
Confidence            999999999999999975 5899998876553 355569999999999999999999999999999999985 7899999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||.|..+.+.++..                                                      ...+.+||+.|
T Consensus       502 DFGIA~aI~~DTTsI------------------------------------------------------~kdsQvGT~NY  527 (677)
T KOG0596|consen  502 DFGIANAIQPDTTSI------------------------------------------------------VKDSQVGTVNY  527 (677)
T ss_pred             eechhcccCccccce------------------------------------------------------eeccccCcccc
Confidence            999999886543211                                                      22345899999


Q ss_pred             ccchhhcCCCC-----------ChhhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCCC--CCCCC--CHHHHHHH
Q 014344          251 VAPEIIEGKGH-----------DFAVDWWSLGVVLHEMLYGATPFRGSS-RKETFYRILCRPP--DLVGE--PTPLRNLI  314 (426)
Q Consensus       251 ~aPE~~~~~~~-----------~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~--~~~~~--~~~~~~li  314 (426)
                      ||||.+....+           +.++||||||||||+|++|++||..-. ....+..|.....  .++..  ..++.+++
T Consensus       528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~m  607 (677)
T KOG0596|consen  528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVM  607 (677)
T ss_pred             cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHH
Confidence            99999976543           468999999999999999999997543 2233333332111  22222  34489999


Q ss_pred             HHHhccCCCCCCChHHHhcCCCcCC
Q 014344          315 RRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      +.||.+||.+|||+.|+|+|||++.
T Consensus       608 K~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  608 KCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHhcCcccCCCcHHHhcCccccc
Confidence            9999999999999999999999975

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.4e-44  Score=337.57  Aligned_cols=258  Identities=27%  Similarity=0.438  Sum_probs=218.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||.|+||+||+|....++..+|+|++.....            ......+..|+.+|+.++|+||+++++.+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC------------QTSVDELRKEVQAMSQCNHPNVVKYYTSF   68 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc------------chHHHHHHHHHHHHHhcCCCCEEEEEEEE
Confidence            479999999999999999999988999999999843221            12456788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSE-QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~-~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      ..+...|+||||++|++|.+++..... ..+++..++.++.|++.||.|||++||+||||||+||++++++.++|+|||+
T Consensus        69 ~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~  148 (267)
T cd06610          69 VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGV  148 (267)
T ss_pred             eeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccch
Confidence            999999999999999999999876533 4689999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +..+......                                                    ........+|++.|+|||
T Consensus       149 ~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~~Pe  176 (267)
T cd06610         149 SASLADGGDR----------------------------------------------------TRKVRKTFVGTPCWMAPE  176 (267)
T ss_pred             HHHhccCccc----------------------------------------------------cccccccccCChhhcChH
Confidence            8776432100                                                    001123446899999999


Q ss_pred             hhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-------CCCCHHHHHHHHHHhccCCCCCC
Q 014344          255 IIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-------VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       255 ~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      ++... .++.++|+|||||++|+|++|..||...+....+.++....+..       ...+..+.+||.+||..||++||
T Consensus       177 ~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  256 (267)
T cd06610         177 VMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRP  256 (267)
T ss_pred             HHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCc
Confidence            98876 78999999999999999999999999887776666665443221       13467789999999999999999


Q ss_pred             ChHHHhcCCCc
Q 014344          327 GVEEIKGHEFF  337 (426)
Q Consensus       327 s~~eil~hp~f  337 (426)
                      ++.+|+.||||
T Consensus       257 ~~~~ll~~p~~  267 (267)
T cd06610         257 TAEELLKHKFF  267 (267)
T ss_pred             CHHHHhhCCCC
Confidence            99999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=8.1e-45  Score=339.62  Aligned_cols=252  Identities=35%  Similarity=0.632  Sum_probs=215.4

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||.|+||.||+|.+..+++.||+|++.+.....          ....+.+..|+.++++++||||+++++++.
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   70 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----------KGSVRNVLNERRILQELNHPFLVNLWYSFQ   70 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----------hhHHHHHHHHHHHHHhCCCCChHHHHHhhc
Confidence            4899999999999999999999999999999997643221          124567888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+..+|+|+||+.|++|..++...  ..+++..+..++.||+.||.|||++|++|+||+|+||++++++.++|+|||++.
T Consensus        71 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~  148 (258)
T cd05578          71 DEENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIAT  148 (258)
T ss_pred             CCCeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeeccccc
Confidence            999999999999999999988764  459999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                         ......|+..|+|||.+
T Consensus       149 ~~~~~~---------------------------------------------------------~~~~~~~~~~y~~PE~~  171 (258)
T cd05578         149 KVTPDT---------------------------------------------------------LTTSTSGTPGYMAPEVL  171 (258)
T ss_pred             ccCCCc---------------------------------------------------------cccccCCChhhcCHHHH
Confidence            653211                                                         11223478889999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHh-cCCCCCCCCCHHHHHHHHHHhccCCCCCCCh--HH
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRIL-CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGV--EE  330 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~--~e  330 (426)
                      .+..++.++|+|||||++|+|++|..||...+.   ........ ..+......+..+.++|.+||..||.+||++  +|
T Consensus       172 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~  251 (258)
T cd05578         172 CRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKD  251 (258)
T ss_pred             cccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHH
Confidence            988899999999999999999999999988763   33333332 2233334557889999999999999999999  99


Q ss_pred             HhcCCCc
Q 014344          331 IKGHEFF  337 (426)
Q Consensus       331 il~hp~f  337 (426)
                      +++||||
T Consensus       252 l~~~~~~  258 (258)
T cd05578         252 LKNHPYF  258 (258)
T ss_pred             HhcCCCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=2.7e-44  Score=335.49  Aligned_cols=250  Identities=26%  Similarity=0.434  Sum_probs=214.1

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||.|+||.||++.+..+++.||+|.+.....            ....+.+..|+.+++.++||||+++++.+.
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   68 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS------------SSAVEDSRKEAVLLAKMKHPNIVAFKESFE   68 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc------------hHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence            58999999999999999999999999999999843211            123456778999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ++..+|+||||+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus        69 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~  148 (255)
T cd08219          69 ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSAR  148 (255)
T ss_pred             ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcce
Confidence            99999999999999999998876555668999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+....                                                        .......|++.|+|||++
T Consensus       149 ~~~~~~--------------------------------------------------------~~~~~~~~~~~~~aPE~~  172 (255)
T cd08219         149 LLTSPG--------------------------------------------------------AYACTYVGTPYYVPPEIW  172 (255)
T ss_pred             eecccc--------------------------------------------------------cccccccCCccccCHHHH
Confidence            553211                                                        011234688999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+..++.++|+||||+++|+|++|..||...+.......+.....  .....+..+.+||.+||+.||.+||++.+|+.-
T Consensus       173 ~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         173 ENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            999999999999999999999999999998887766665543322  223457789999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=4.6e-44  Score=375.99  Aligned_cols=153  Identities=33%  Similarity=0.509  Sum_probs=137.2

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|+++++||+|+||+||+|.+..+++.||||++.+....          .......+..|+.+++.++||||+++++
T Consensus         2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----------~~~~~~~~~~E~~~l~~l~hp~Iv~~~~   71 (669)
T cd05610           2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----------NKNMVHQVQAERDALALSKSPFIVHLYY   71 (669)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----------CHHHHHHHHHHHHHHHhcCCCCcCeEEE
Confidence            367899999999999999999999999999999998653321          1223467888999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.....+|+||||+.|++|.+++...  +.+++..++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||
T Consensus        72 ~~~~~~~~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG  149 (669)
T cd05610          72 SLQSANNVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFG  149 (669)
T ss_pred             EEEECCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence            999999999999999999999998754  348999999999999999999999999999999999999999999999999


Q ss_pred             ccccC
Q 014344          174 LSTKL  178 (426)
Q Consensus       174 ls~~~  178 (426)
                      +++..
T Consensus       150 ls~~~  154 (669)
T cd05610         150 LSKVT  154 (669)
T ss_pred             CCccc
Confidence            99754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=1.3e-44  Score=343.10  Aligned_cols=253  Identities=29%  Similarity=0.431  Sum_probs=208.8

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||.|++|.||+|++..+++.||||++.....           .......+..|++++++++||||+++++++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   69 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-----------TEGVPSTAIREISLLKELNHPNIVKLLDVIH   69 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-----------ccccchHHHHHHHHHHhcCCCCCcchhhhcc
Confidence            48999999999999999999999999999998843221           1123356788999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      +....++||||+. ++|.+++.......+++..++.++.||+.||+|||+.|++||||+|+||+++.++.+||+|||++.
T Consensus        70 ~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~  148 (284)
T cd07860          70 TENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR  148 (284)
T ss_pred             cCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchh
Confidence            9999999999996 688888776555668999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+....                                                        .......+++.|+|||++
T Consensus       149 ~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~~  172 (284)
T cd07860         149 AFGVPV--------------------------------------------------------RTYTHEVVTLWYRAPEIL  172 (284)
T ss_pred             hcccCc--------------------------------------------------------cccccccccccccCCeEE
Confidence            543110                                                        011122468889999998


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC---------------------------CCCC
Q 014344          257 EGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP---------------------------DLVG  305 (426)
Q Consensus       257 ~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~---------------------------~~~~  305 (426)
                      .+.. ++.++|||||||++|+|++|+.||.+.+......++..   .+.                           ....
T Consensus       173 ~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (284)
T cd07860         173 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPP  252 (284)
T ss_pred             ecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHccc
Confidence            7644 58899999999999999999999988776554433321   000                           0112


Q ss_pred             CCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       306 ~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      .+..++++|.+||+.||++|||+++++.||||
T Consensus       253 ~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         253 LDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             CCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            35778899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=2.7e-44  Score=345.41  Aligned_cols=257  Identities=27%  Similarity=0.388  Sum_probs=210.0

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ..++|++++.||.|+||.||+|.+..+++.||+|++.....           .......+.+|+.++++++|+||+++++
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~i~~~~~   73 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-----------RDGIPISSLREITLLLNLRHPNIVELKE   73 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-----------CCCCcchhhHHHHHHHhCCCCCCcceEE
Confidence            56789999999999999999999999999999999843221           1112234556999999999999999999


Q ss_pred             eeecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           94 VLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        94 ~~~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++...  +.+|+||||+. ++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.+||+|
T Consensus        74 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~d  151 (309)
T cd07845          74 VVVGKHLDSIFLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIAD  151 (309)
T ss_pred             EEecCCCCeEEEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECc
Confidence            98755  57899999996 58888776543 4589999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                        .......+++.|+
T Consensus       152 fg~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~  175 (309)
T cd07845         152 FGLARTYGLPA--------------------------------------------------------KPMTPKVVTLWYR  175 (309)
T ss_pred             cceeeecCCcc--------------------------------------------------------CCCCccccccccc
Confidence            99987653211                                                        0011223578899


Q ss_pred             cchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----------------------C-----
Q 014344          252 APEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----------------------D-----  302 (426)
Q Consensus       252 aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----------------------~-----  302 (426)
                      |||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.....                       .     
T Consensus       176 aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (309)
T cd07845         176 APELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNL  255 (309)
T ss_pred             ChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCch
Confidence            9999876 5578999999999999999999999998888776655432100                       0     


Q ss_pred             ---CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 ---LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 ---~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                         ....+..+.+||.+||+.||++|||+++++.||||++
T Consensus       256 ~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~  295 (309)
T cd07845         256 KHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE  295 (309)
T ss_pred             HHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence               0113667889999999999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-44  Score=339.06  Aligned_cols=253  Identities=26%  Similarity=0.449  Sum_probs=211.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~   93 (426)
                      .++|++.+.||.|++|.||+|.+..+++.+|+|++....              .....+..|+.+++++ +||||+++++
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~e~~~l~~~~~h~~i~~~~~   70 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--------------DEEEEIKEEYNILRKYSNHPNIATFYG   70 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--------------hhHHHHHHHHHHHHHhcCCCChheEEE
Confidence            368999999999999999999999999999999985432              1235678899999999 6999999999


Q ss_pred             eeecCC------eEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           94 VLSTDK------FVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        94 ~~~~~~------~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      ++....      .+|+||||+++++|.+++....  ...+++..++.++.|++.||.|||+.|++||||+|+||+++.++
T Consensus        71 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~  150 (275)
T cd06608          71 AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA  150 (275)
T ss_pred             EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC
Confidence            996544      5899999999999999876543  45699999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .++|+|||++.......                                                        .......
T Consensus       151 ~~~l~d~~~~~~~~~~~--------------------------------------------------------~~~~~~~  174 (275)
T cd06608         151 EVKLVDFGVSAQLDSTL--------------------------------------------------------GRRNTFI  174 (275)
T ss_pred             eEEECCCccceecccch--------------------------------------------------------hhhcCcc
Confidence            99999999987543211                                                        1122345


Q ss_pred             cCCCCccchhhcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCHHHHHHHHH
Q 014344          246 GTEEYVAPEIIEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV----GEPTPLRNLIRR  316 (426)
Q Consensus       246 gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~li~~  316 (426)
                      |++.|+|||++.+     ..++.++|||||||++|+|++|.+||..........++........    ..+..+.+||.+
T Consensus       175 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  254 (275)
T cd06608         175 GTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISE  254 (275)
T ss_pred             ccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHH
Confidence            8999999999864     3467899999999999999999999987766666666554433221    245689999999


Q ss_pred             HhccCCCCCCChHHHhcCCCc
Q 014344          317 LLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ||..||++|||+.++++|||+
T Consensus       255 ~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         255 CLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HhhcChhhCcCHHHHhcCCCC
Confidence            999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-44  Score=335.32  Aligned_cols=251  Identities=28%  Similarity=0.480  Sum_probs=213.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|++....             ....+.+..|+.+++.++||||+++++++
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-------------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   69 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP-------------GDDFEIIQQEISMLKECRHPNIVAYFGSY   69 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc-------------hhhHHHHHHHHHHHHhCCCCChhceEEEE
Confidence            57999999999999999999999999999999985432             12356788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .....+|++|||+.+++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++
T Consensus        70 ~~~~~~~l~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~  148 (262)
T cd06613          70 LRRDKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVS  148 (262)
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccc
Confidence            99999999999999999999876642 35999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                        ......+++..|+|||.
T Consensus       149 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~Pe~  172 (262)
T cd06613         149 AQLTATI--------------------------------------------------------AKRKSFIGTPYWMAPEV  172 (262)
T ss_pred             hhhhhhh--------------------------------------------------------hccccccCCccccCchh
Confidence            7653210                                                        11223468889999999


Q ss_pred             hcCC---CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CC-C---CCCCCHHHHHHHHHHhccCCCCCC
Q 014344          256 IEGK---GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--PP-D---LVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       256 ~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~-~---~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      +.+.   .++.++|+|||||++|+|++|.+||...+.......+...  .+ .   ....+..+.+||.+||..+|.+||
T Consensus       173 ~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (262)
T cd06613         173 AAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRP  252 (262)
T ss_pred             hcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCC
Confidence            9877   7889999999999999999999999887766554444322  11 1   112356789999999999999999


Q ss_pred             ChHHHhcCCC
Q 014344          327 GVEEIKGHEF  336 (426)
Q Consensus       327 s~~eil~hp~  336 (426)
                      |+.+|+.|+|
T Consensus       253 t~~~il~~~~  262 (262)
T cd06613         253 TATKLLQHPF  262 (262)
T ss_pred             CHHHHhcCCC
Confidence            9999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-44  Score=342.38  Aligned_cols=251  Identities=17%  Similarity=0.212  Sum_probs=209.5

Q ss_pred             CCCCCCCCcEEE--eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           10 IRSLDFSCLRIV--SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        10 ~~~l~~~~y~i~--~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      .+.++.++++..  ..||+|++|.||+|..  +|+.||||++.+...          ......+.+.+|+.+|++++|||
T Consensus        12 ~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~h~n   79 (283)
T PHA02988         12 IKCIESDDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHK----------GHKVLIDITENEIKNLRRIDSNN   79 (283)
T ss_pred             ceecCHHHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEecccccc----------ccHHHHHHHHHHHHHHHhcCCCC
Confidence            445666666666  7899999999999986  789999999854321          11123567889999999999999


Q ss_pred             cceeeeeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeec
Q 014344           88 LPRLRGVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQ  162 (426)
Q Consensus        88 iv~l~~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~  162 (426)
                      |+++++++.+    ...+++|||||+||+|.+++...  +.++......++.|++.||.|||+ .+++||||||+|||++
T Consensus        80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~  157 (283)
T PHA02988         80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT  157 (283)
T ss_pred             EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC
Confidence            9999999866    45789999999999999998754  358899999999999999999998 5999999999999999


Q ss_pred             cCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          163 ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       163 ~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                      .++.+||+|||++..+...                                                           ..
T Consensus       158 ~~~~~kl~dfg~~~~~~~~-----------------------------------------------------------~~  178 (283)
T PHA02988        158 ENYKLKIICHGLEKILSSP-----------------------------------------------------------PF  178 (283)
T ss_pred             CCCcEEEcccchHhhhccc-----------------------------------------------------------cc
Confidence            9999999999998754211                                                           11


Q ss_pred             ccccCCCCccchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHH
Q 014344          243 SFVGTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRL  317 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~li~~~  317 (426)
                      ..+||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+.+..+.+..+...   ++.....+..+.+||.+|
T Consensus       179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~c  258 (283)
T PHA02988        179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEAC  258 (283)
T ss_pred             cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHH
Confidence            2358899999999976  67899999999999999999999999998888777776432   222235688999999999


Q ss_pred             hccCCCCCCChHHHhc
Q 014344          318 LEKDPTKRIGVEEIKG  333 (426)
Q Consensus       318 L~~dP~~R~s~~eil~  333 (426)
                      |+.||++|||++|++.
T Consensus       259 l~~dp~~Rps~~ell~  274 (283)
T PHA02988        259 TSHDSIKRPNIKEILY  274 (283)
T ss_pred             hcCCcccCcCHHHHHH
Confidence            9999999999999985

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.3e-44  Score=336.90  Aligned_cols=259  Identities=40%  Similarity=0.696  Sum_probs=217.9

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEE
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGY  103 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l  103 (426)
                      ||.|+||.||+|++..+++.+|+|++.+.....          ......+..|+.+++.++||||+++++.+......|+
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~----------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   70 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR----------KNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYL   70 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhh----------hhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEE
Confidence            699999999999999999999999986543321          1245678889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCC
Q 014344          104 AIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP  183 (426)
Q Consensus       104 V~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~  183 (426)
                      +|||+.|++|.+++....  .+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++........
T Consensus        71 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~  148 (265)
T cd05579          71 VMEYLPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQ  148 (265)
T ss_pred             EEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcc
Confidence            999999999999987654  589999999999999999999999999999999999999999999999999875432110


Q ss_pred             CCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCCh
Q 014344          184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF  263 (426)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  263 (426)
                      ...                                                ...........+++.|+|||.+.+..++.
T Consensus       149 ~~~------------------------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~  180 (265)
T cd05579         149 INL------------------------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSK  180 (265)
T ss_pred             ccc------------------------------------------------ccccccccCcccCccccCHHHhcCCCCCc
Confidence            000                                                00011223345888999999999888999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCHHHHHHHHHHhccCCCCCCCh---HHHhcCCCc
Q 014344          264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG---EPTPLRNLIRRLLEKDPTKRIGV---EEIKGHEFF  337 (426)
Q Consensus       264 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~li~~~L~~dP~~R~s~---~eil~hp~f  337 (426)
                      ++|+|||||++|+|++|..||......+.+..+.........   .+..+.+||.+||+.+|.+|||+   .++|+||||
T Consensus       181 ~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~  260 (265)
T cd05579         181 TVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFF  260 (265)
T ss_pred             chhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccc
Confidence            999999999999999999999988888777776643333322   27889999999999999999999   999999999


Q ss_pred             CCCCh
Q 014344          338 KGVNW  342 (426)
Q Consensus       338 ~~~~~  342 (426)
                      ++++|
T Consensus       261 ~~~~~  265 (265)
T cd05579         261 KGIDW  265 (265)
T ss_pred             cCCCC
Confidence            99988

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-44  Score=341.20  Aligned_cols=254  Identities=25%  Similarity=0.399  Sum_probs=204.8

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|++++.||+|++|+||+|.++.+++.||||.+......            .....+.+|+.+++.++||||+++++
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~i~~~~~   70 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE------------GAPFTAIREASLLKDLKHANIVTLHD   70 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc------------CCchhHHHHHHHHhhCCCcceeeEEE
Confidence            467899999999999999999999999999999998542210            11234567999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.++...|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||
T Consensus        71 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg  148 (291)
T cd07844          71 IIHTKKTLTLVFEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFG  148 (291)
T ss_pred             EEecCCeEEEEEecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccc
Confidence            9999999999999997 58988876554 358999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        .......+++.|+||
T Consensus       149 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~aP  172 (291)
T cd07844         149 LARAKSVPS--------------------------------------------------------KTYSNEVVTLWYRPP  172 (291)
T ss_pred             cccccCCCC--------------------------------------------------------ccccccccccccCCc
Confidence            986532100                                                        001122468889999


Q ss_pred             hhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHh---cCC------------------------C---
Q 014344          254 EIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSS-RKETFYRIL---CRP------------------------P---  301 (426)
Q Consensus       254 E~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~---~~~------------------------~---  301 (426)
                      |++.+ ..++.++||||+||++|+|++|+.||.+.. ..+....+.   ..+                        .   
T Consensus       173 E~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (291)
T cd07844         173 DVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLI  252 (291)
T ss_pred             HHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHH
Confidence            99876 458899999999999999999999997665 222222111   000                        0   


Q ss_pred             -CCCCCC--HHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          302 -DLVGEP--TPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       302 -~~~~~~--~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                       ......  ..+.++|.+||+.+|.+|||+.+++.||||
T Consensus       253 ~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         253 NHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             HhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence             000122  667899999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=2.8e-44  Score=351.90  Aligned_cols=252  Identities=25%  Similarity=0.458  Sum_probs=206.2

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ..+|++++.||+|+||+||+|.+..+++.||||++.+..           ........+.+|+.+++.++||||++++++
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   83 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-----------QNVTHAKRAYRELVLMKLVNHKNIIGLLNV   83 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-----------cChhHHHHHHHHHHHHHhcCCCCCcceeee
Confidence            467999999999999999999999999999999984321           112234567789999999999999999999


Q ss_pred             eecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      |...      ...|+|||||. ++|..++...    +++..+..++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus        84 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~k  158 (353)
T cd07850          84 FTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  158 (353)
T ss_pred             eccCCCccccCcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEE
Confidence            8644      35799999996 5777766432    88999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++.......                                                         ......||+
T Consensus       159 L~Dfg~~~~~~~~~---------------------------------------------------------~~~~~~~~~  181 (353)
T cd07850         159 ILDFGLARTAGTSF---------------------------------------------------------MMTPYVVTR  181 (353)
T ss_pred             EccCccceeCCCCC---------------------------------------------------------CCCCCcccc
Confidence            99999987543110                                                         122345889


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC-------------------CC----
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP-------------------PD----  302 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~-------------------~~----  302 (426)
                      .|+|||.+.+..++.++|||||||++|+|++|+.||...+....+..+..   .+                   +.    
T Consensus       182 ~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
T cd07850         182 YYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGY  261 (353)
T ss_pred             cccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCc
Confidence            99999999999999999999999999999999999987765544433321   00                   00    


Q ss_pred             ------------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 ------------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 ------------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                        ....+..+++||.+||+.||++|||+.|+|.||||+.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         262 SFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             chhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence                              0012446789999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.8e-44  Score=347.60  Aligned_cols=248  Identities=27%  Similarity=0.411  Sum_probs=190.9

Q ss_pred             EeeecccCceEEEEEEEcC--CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee--
Q 014344           21 VSALGRGAKGVVFLVKDVE--SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS--   96 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~--   96 (426)
                      ..+||+|+||+||+|++..  ++..||+|.+....               ....+.+|+.+|+.++||||+++++++.  
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   70 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---------------ISMSACREIALLRELKHPNVIALQKVFLSH   70 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC---------------CcHHHHHHHHHHHhCCCCCeeeEEEEEecc
Confidence            3689999999999999754  56789999884321               1234667999999999999999999884  


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee----ccCC
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQ-------SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI----QENG  165 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~-------~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl----~~~g  165 (426)
                      .+..+|+||||+. ++|.+++...       ....+++..++.++.||+.||.|||++||+||||||+|||+    +.++
T Consensus        71 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~  149 (317)
T cd07867          71 SDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG  149 (317)
T ss_pred             CCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCC
Confidence            4668899999996 5777765422       12348899999999999999999999999999999999999    4667


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||+++.......                                                     ........+
T Consensus       150 ~~kl~DfG~a~~~~~~~~-----------------------------------------------------~~~~~~~~~  176 (317)
T cd07867         150 RVKIADMGFARLFNSPLK-----------------------------------------------------PLADLDPVV  176 (317)
T ss_pred             cEEEeeccceeccCCCcc-----------------------------------------------------cccccCcce
Confidence            999999999976532110                                                     001123456


Q ss_pred             cCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHh---cCC------------
Q 014344          246 GTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---------ETFYRIL---CRP------------  300 (426)
Q Consensus       246 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---------~~~~~i~---~~~------------  300 (426)
                      ||+.|+|||++.+ ..++.++|||||||++|||++|.+||......         ....++.   ..+            
T Consensus       177 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (317)
T cd07867         177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMP  256 (317)
T ss_pred             ecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence            8999999999977 45799999999999999999999999754321         1111100   000            


Q ss_pred             ------------------------CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          301 ------------------------PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       301 ------------------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                                              ......+..+.+||.+||+.||.+|||++|+|+||||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         257 EYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             cchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                                    0001123557899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.6e-44  Score=334.43  Aligned_cols=250  Identities=26%  Similarity=0.461  Sum_probs=214.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||.||+|....+++.||+|.+....               ....+..|+++++.++||||+++++.+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~e~~~~~~l~~~~i~~~~~~~   67 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---------------DLQEIIKEISILKQCDSPYIVKYYGSY   67 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---------------HHHHHHHHHHHHHhCCCCcEeeeeeee
Confidence            57999999999999999999999889999999984332               145788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+..+|+++||+.+++|.+++.... ..+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++
T Consensus        68 ~~~~~~~l~~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~  146 (256)
T cd06612          68 FKNTDLWIVMEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVS  146 (256)
T ss_pred             ecCCcEEEEEecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccc
Confidence            99999999999999999999886543 45899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        .......|+..|+|||+
T Consensus       147 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~PE~  170 (256)
T cd06612         147 GQLTDTM--------------------------------------------------------AKRNTVIGTPFWMAPEV  170 (256)
T ss_pred             hhcccCc--------------------------------------------------------cccccccCCccccCHHH
Confidence            7653211                                                        01223347889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC----CCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL----VGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..++.++|||||||++|+|++|+.||...........+.......    ...+..+.++|.+||+.||++|||+.++
T Consensus       171 ~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~i  250 (256)
T cd06612         171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQL  250 (256)
T ss_pred             HhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHH
Confidence            999999999999999999999999999998877655544443322211    1235689999999999999999999999


Q ss_pred             hcCCCc
Q 014344          332 KGHEFF  337 (426)
Q Consensus       332 l~hp~f  337 (426)
                      +.||||
T Consensus       251 l~~~~~  256 (256)
T cd06612         251 LQHPFI  256 (256)
T ss_pred             hcCCCC
Confidence            999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.6e-44  Score=339.17  Aligned_cols=261  Identities=24%  Similarity=0.420  Sum_probs=212.4

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|+||.||++.+..+++.||+|++.......       .........+..|+.+++.++||||+++++++.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~-------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   73 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTS-------SEQEEVVEALRKEIRLMARLNHPHIIRMLGATC   73 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCc-------hhHHHHHHHHHHHHHHHHHcCCCceehhhceec
Confidence            4889999999999999999999999999999985432111       011124568889999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-cEEEeccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-HIMLVDFDLS  175 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-~ikL~DFgls  175 (426)
                      ..+..++||||+.|++|.+++....  .+++..+..++.||+.||.|||++|++||||||+||+++.++ .++|+|||++
T Consensus        74 ~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~  151 (268)
T cd06630          74 EDSHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAA  151 (268)
T ss_pred             cCCeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccc
Confidence            9999999999999999999887543  589999999999999999999999999999999999998776 5999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+......                                                    ........+||..|+|||.
T Consensus       152 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~~PE~  179 (268)
T cd06630         152 ARLAAKGTG----------------------------------------------------AGEFQGQLLGTIAFMAPEV  179 (268)
T ss_pred             ccccccccc----------------------------------------------------CCccccccccccceeCHhH
Confidence            766421100                                                    0011223468999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHhc---CCCCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILC---RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~---~~i~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      +.+..++.++|+||+||++|+|++|..||.........   .++..   .+......+..+.++|.+||..+|.+||++.
T Consensus       180 ~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~  259 (268)
T cd06630         180 LRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSR  259 (268)
T ss_pred             hccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHH
Confidence            99888999999999999999999999999755432222   22211   1222224567899999999999999999999


Q ss_pred             HHhcCCCcC
Q 014344          330 EIKGHEFFK  338 (426)
Q Consensus       330 eil~hp~f~  338 (426)
                      ++++||||+
T Consensus       260 ~ll~~~~~~  268 (268)
T cd06630         260 ELLKHPVFR  268 (268)
T ss_pred             HHhcCcccC
Confidence            999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=6.5e-44  Score=334.68  Aligned_cols=254  Identities=22%  Similarity=0.308  Sum_probs=215.6

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      +.+...+|++.+.||+|+||.||+|.+..+++.||+|++....              .....+.+|+++++.++||||++
T Consensus         1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--------------~~~~~~~~e~~~l~~l~h~~i~~   66 (263)
T cd05052           1 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMKEIKHPNLVQ   66 (263)
T ss_pred             CCCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--------------hHHHHHHHHHHHHHhCCCCChhh
Confidence            3567788999999999999999999999999999999974321              12356788999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++..+..++++|||+++++|.+++.......+++..++.++.|++.||+|||++|++||||||+|||++.++.+||+
T Consensus        67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~  146 (263)
T cd05052          67 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA  146 (263)
T ss_pred             eEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeC
Confidence            99999999999999999999999999876555568999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++.........                                                       ......+++.|
T Consensus       147 df~~~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~y  171 (263)
T cd05052         147 DFGLSRLMTGDTYT-------------------------------------------------------AHAGAKFPIKW  171 (263)
T ss_pred             CCccccccccceee-------------------------------------------------------ccCCCCCcccc
Confidence            99998765321100                                                       00111246679


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      +|||.+.+..++.++|||||||++|+|++ |..||.+.+..+.+..+...  +......+..+.++|.+||..+|++||+
T Consensus       172 ~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~  251 (263)
T cd05052         172 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPS  251 (263)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCC
Confidence            99999999999999999999999999998 99999988877766665532  2333456789999999999999999999


Q ss_pred             hHHHhc
Q 014344          328 VEEIKG  333 (426)
Q Consensus       328 ~~eil~  333 (426)
                      +.++++
T Consensus       252 ~~~l~~  257 (263)
T cd05052         252 FAEIHQ  257 (263)
T ss_pred             HHHHHH
Confidence            999975

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=5e-44  Score=336.21  Aligned_cols=253  Identities=20%  Similarity=0.277  Sum_probs=209.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ++..+|++.+.||+|+||.||+|...   ..+..||+|++....            .......+..|+.+++.++||||+
T Consensus         2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~iv   69 (266)
T cd05064           2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC------------SDKQRRGFLAEALTLGQFDHSNIV   69 (266)
T ss_pred             CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC------------CHHHHHHHHHHHHHHhcCCCCCcC
Confidence            45678999999999999999999865   345689999984321            112345688899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++...+..|+||||+++|+|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.+++
T Consensus        70 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l  148 (266)
T cd05064          70 RLEGVITRGNTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKI  148 (266)
T ss_pred             eEEEEEecCCCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEE
Confidence            99999999999999999999999999887543 35899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||.+.......                                                       ........++..
T Consensus       149 ~dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~  173 (266)
T cd05064         149 SGFRRLQEDKSEA-------------------------------------------------------IYTTMSGKSPVL  173 (266)
T ss_pred             CCCcccccccccc-------------------------------------------------------hhcccCCCCcee
Confidence            9999765432100                                                       000112235678


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++||++ +|..||...+..+....+...  .+.....+..+.+++.+||+.+|.+||
T Consensus       174 y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP  253 (266)
T cd05064         174 WAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERP  253 (266)
T ss_pred             ecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCC
Confidence            99999999999999999999999999977 599999988877666655432  233445678899999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      ++++|++
T Consensus       254 ~~~~i~~  260 (266)
T cd05064         254 RFSQIHS  260 (266)
T ss_pred             CHHHHHH
Confidence            9999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=5.8e-44  Score=340.02  Aligned_cols=254  Identities=27%  Similarity=0.421  Sum_probs=210.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~   93 (426)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++....              .....+..|+.+++++ +|||++++++
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--------------~~~~~~~~e~~~l~~l~~h~ni~~~~~   86 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--------------DVDEEIEAEYNILQSLPNHPNVVKFYG   86 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--------------cHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence            577999999999999999999999999999999984321              1224566789999998 7999999999


Q ss_pred             eeecC-----CeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           94 VLSTD-----KFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        94 ~~~~~-----~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ++...     ...|+||||++|++|.++++..  ....+++..++.++.|++.||+|||+.|++||||||+||+++.++.
T Consensus        87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~  166 (291)
T cd06639          87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG  166 (291)
T ss_pred             EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC
Confidence            98643     4689999999999999987642  2346899999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++.......                                                        .......|
T Consensus       167 ~kl~dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~  190 (291)
T cd06639         167 VKLVDFGVSAQLTSTR--------------------------------------------------------LRRNTSVG  190 (291)
T ss_pred             EEEeecccchhccccc--------------------------------------------------------ccccCccC
Confidence            9999999987653211                                                        01122358


Q ss_pred             CCCCccchhhcCC-----CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHH
Q 014344          247 TEEYVAPEIIEGK-----GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRL  317 (426)
Q Consensus       247 t~~y~aPE~~~~~-----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~  317 (426)
                      ++.|+|||++...     .++.++|+|||||++|+|++|++||...........+....+.    ....+..+.+||.+|
T Consensus       191 ~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  270 (291)
T cd06639         191 TPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQC  270 (291)
T ss_pred             CccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHH
Confidence            8999999998653     3678999999999999999999999887776665555433222    223456799999999


Q ss_pred             hccCCCCCCChHHHhcCCCcC
Q 014344          318 LEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       318 L~~dP~~R~s~~eil~hp~f~  338 (426)
                      |+.+|++||++.+|++||||+
T Consensus       271 l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         271 LIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             hhcChhhCcCHHHHhcCcccC
Confidence            999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=4.4e-44  Score=336.39  Aligned_cols=259  Identities=26%  Similarity=0.427  Sum_probs=210.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++.+.||+|+||.||+|.+..++..||+|++.......        ........+..|+.+++.++||||+++++++
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   73 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESP--------ETSKEVSALECEIQLLKNLQHERIVQYYGCL   73 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCc--------hhHHHHHHHHHHHHHHHHcCCCCeeeEEEEE
Confidence            46999999999999999999999999999999885432111        1122456788899999999999999999998


Q ss_pred             ec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           96 ST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        96 ~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ..  ...+++++||+++++|.+++....  .+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg  151 (266)
T cd06651          74 RDRAEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG  151 (266)
T ss_pred             EcCCCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCC
Confidence            65  467899999999999999886543  48999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++..+......                                                     ........++..|+||
T Consensus       152 ~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~aP  178 (266)
T cd06651         152 ASKRLQTICMS-----------------------------------------------------GTGIRSVTGTPYWMSP  178 (266)
T ss_pred             Ccccccccccc-----------------------------------------------------CCccccCCccccccCH
Confidence            98765321100                                                     0011223488899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CC-CCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PD-LVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~-~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |.+.+..++.++|+||+||++|+|++|+.||...........+....  +. ....+..+++|| +||..+|++||+++|
T Consensus       179 E~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~e  257 (266)
T cd06651         179 EVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEE  257 (266)
T ss_pred             HHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHH
Confidence            99999889999999999999999999999998876665555443322  22 123467788898 566689999999999


Q ss_pred             HhcCCCcC
Q 014344          331 IKGHEFFK  338 (426)
Q Consensus       331 il~hp~f~  338 (426)
                      |+.||||+
T Consensus       258 il~hp~~~  265 (266)
T cd06651         258 LLRHPFAQ  265 (266)
T ss_pred             HhcCcccc
Confidence            99999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=3e-44  Score=340.39  Aligned_cols=256  Identities=23%  Similarity=0.344  Sum_probs=214.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCC-----ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESS-----ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      +.+++|++++.||+|+||.||+|.+...+     ..||+|.+....            .......+.+|+.+++.++|||
T Consensus         2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~------------~~~~~~~~~~ei~~l~~l~h~~   69 (283)
T cd05048           2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA------------EPKVQQEFRQEAELMSDLQHPN   69 (283)
T ss_pred             CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC------------CHHHHHHHHHHHHHHHhcCCcc
Confidence            46678999999999999999999986554     679999874321            1233456888999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--------------QMFSDDTIRFYAAELVLALEYLHNMGIVYRD  153 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~--------------~~l~~~~~~~~~~qil~aL~~LH~~giiHrD  153 (426)
                      |+++++++......|++|||+++++|.+++.....              ..++...+..++.||+.||.|||++|++|||
T Consensus        70 i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~d  149 (283)
T cd05048          70 IVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRD  149 (283)
T ss_pred             cceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            99999999999999999999999999998875422              4588899999999999999999999999999


Q ss_pred             CCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 014344          154 LKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS  233 (426)
Q Consensus       154 lKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (426)
                      |||+||+++.++.++|+|||++........                                                  
T Consensus       150 lkp~Nil~~~~~~~~L~dfg~~~~~~~~~~--------------------------------------------------  179 (283)
T cd05048         150 LAARNCLVGEGLTVKISDFGLSRDIYSADY--------------------------------------------------  179 (283)
T ss_pred             cccceEEEcCCCcEEECCCcceeecccccc--------------------------------------------------
Confidence            999999999999999999999875532110                                                  


Q ss_pred             CCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHH
Q 014344          234 DSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPL  310 (426)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~  310 (426)
                          ........+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+....  +.....+..+
T Consensus       180 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  255 (283)
T cd05048         180 ----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARV  255 (283)
T ss_pred             ----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHH
Confidence                011223357889999999998889999999999999999997 999999988877766665432  2234568899


Q ss_pred             HHHHHHHhccCCCCCCChHHHhcC
Q 014344          311 RNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       311 ~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+|+.+||+.||.+||++.+|+++
T Consensus       256 ~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         256 YALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-45  Score=325.09  Aligned_cols=258  Identities=27%  Similarity=0.441  Sum_probs=218.4

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcc
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLP   89 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv   89 (426)
                      ...++++.+++..||+|+.|+||+++.+.+|...|||.+.+.            .+.+..+++...++++.+.. +|+||
T Consensus        87 ~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt------------~Nkee~kRILmDldvv~~s~dcpyIV  154 (391)
T KOG0983|consen   87 YQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT------------GNKEENKRILMDLDVVLKSHDCPYIV  154 (391)
T ss_pred             cccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc------------CCHHHHHHHHHhhhHHhhccCCCeee
Confidence            456778899999999999999999999999999999999553            23345678888888887765 89999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +++|+|..+..+++.||.|. .-+..++++. .++++|..+-++...++.||.||-+ +||||||+||.|||+|..|.||
T Consensus       155 ~c~GyFi~n~dV~IcMelMs-~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniK  232 (391)
T KOG0983|consen  155 QCFGYFITNTDVFICMELMS-TCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIK  232 (391)
T ss_pred             eeeeEEeeCchHHHHHHHHH-HHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEE
Confidence            99999999999999999983 4455555544 4669999999999999999999986 6999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |||||.+..+..+..                                                         .+...|.+
T Consensus       233 lCDFGIsGrlvdSkA---------------------------------------------------------htrsAGC~  255 (391)
T KOG0983|consen  233 LCDFGISGRLVDSKA---------------------------------------------------------HTRSAGCA  255 (391)
T ss_pred             eecccccceeecccc---------------------------------------------------------cccccCCc
Confidence            999999988753210                                                         11124899


Q ss_pred             CCccchhhcC---CCCChhhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCCCCCC----CCCHHHHHHHHHHhcc
Q 014344          249 EYVAPEIIEG---KGHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRILCRPPDLV----GEPTPLRNLIRRLLEK  320 (426)
Q Consensus       249 ~y~aPE~~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~----~~~~~~~~li~~~L~~  320 (426)
                      .|||||.+.-   ..|+-++||||||++++||.||++||.+. ..-+++.+++...|..+    +.++.+.+|+..||++
T Consensus       256 ~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~k  335 (391)
T KOG0983|consen  256 AYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTK  335 (391)
T ss_pred             cccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhc
Confidence            9999999864   46899999999999999999999999985 45677778876655433    4588999999999999


Q ss_pred             CCCCCCChHHHhcCCCcCC
Q 014344          321 DPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       321 dP~~R~s~~eil~hp~f~~  339 (426)
                      |+.+||...++|+|||+..
T Consensus       336 d~r~RP~Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  336 DHRKRPKYNKLLEHPFIKR  354 (391)
T ss_pred             CcccCcchHHHhcCcceee
Confidence            9999999999999999864

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1.7e-44  Score=342.48  Aligned_cols=253  Identities=26%  Similarity=0.421  Sum_probs=209.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|.+..+++.||+|++.+...           .....+.+..|+++++.++||||+++++++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   69 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-----------DKMVKKIAMREIRMLKQLRHENLVNLIEVF   69 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-----------cchhhHHHHHHHHHHHhcCCcchhhHHHhc
Confidence            469999999999999999999999999999998743221           112345677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+...|+||||+++++|..+....  ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++
T Consensus        70 ~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~  147 (286)
T cd07846          70 RRKKRLYLVFEFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA  147 (286)
T ss_pred             ccCCeEEEEEecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeee
Confidence            9999999999999999988775543  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                        .......++..|+|||+
T Consensus       148 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  171 (286)
T cd07846         148 RTLAAPG--------------------------------------------------------EVYTDYVATRWYRAPEL  171 (286)
T ss_pred             eeccCCc--------------------------------------------------------cccCcccceeeccCcHH
Confidence            7653211                                                        11223458889999999


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--------------------------------CC
Q 014344          256 IEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--------------------------------PD  302 (426)
Q Consensus       256 ~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--------------------------------~~  302 (426)
                      +.+ ..++.++|||||||++|+|++|++||...+..+.+.++....                                ..
T Consensus       172 ~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (286)
T cd07846         172 LVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKR  251 (286)
T ss_pred             hccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHh
Confidence            876 446889999999999999999999998776554433332100                                00


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ..+.+..+.+||.+||..+|++||++.+++.||||
T Consensus       252 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         252 FPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            12446779999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.8e-44  Score=342.53  Aligned_cols=254  Identities=24%  Similarity=0.437  Sum_probs=211.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|.+..+++.||+|.+....            .......+.+|+.++++++||||+++++++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~------------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   68 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL------------DESKFNQIIMELDILHKAVSPYIVDFYGAF   68 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc------------CHHHHHHHHHHHHHHHhcCCCcHHhhhhhe
Confidence            46999999999999999999999999999999884321            122346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~-~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ..++.+|+|||||+|++|..++.... ...+++..++.++.||+.||.|||+ .||+||||||+||+++.++.++|+|||
T Consensus        69 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg  148 (286)
T cd06622          69 FIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFG  148 (286)
T ss_pred             ecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecC
Confidence            99999999999999999998876531 2358999999999999999999997 599999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++..+...                                                          ......|++.|+||
T Consensus       149 ~~~~~~~~----------------------------------------------------------~~~~~~~~~~y~aP  170 (286)
T cd06622         149 VSGNLVAS----------------------------------------------------------LAKTNIGCQSYMAP  170 (286)
T ss_pred             CcccccCC----------------------------------------------------------ccccCCCccCccCc
Confidence            98754211                                                          11223588899999


Q ss_pred             hhhcCCC------CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HhcCC--CCCCCCCHHHHHHHHHHhccCC
Q 014344          254 EIIEGKG------HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR---ILCRP--PDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       254 E~~~~~~------~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~---i~~~~--~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      |.+.+..      ++.++|+|||||++|+|++|+.||........+..   +....  ......+..+.+||.+||+.+|
T Consensus       171 E~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  250 (286)
T cd06622         171 ERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIP  250 (286)
T ss_pred             chhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCc
Confidence            9986543      47899999999999999999999987655443332   22221  2223467889999999999999


Q ss_pred             CCCCChHHHhcCCCcCC
Q 014344          323 TKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~  339 (426)
                      ++||++++++.||||..
T Consensus       251 ~~Rp~~~~l~~~~~~~~  267 (286)
T cd06622         251 NRRPTYAQLLEHPWLVK  267 (286)
T ss_pred             ccCCCHHHHhcChhhhh
Confidence            99999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=5.7e-44  Score=342.41  Aligned_cols=255  Identities=22%  Similarity=0.268  Sum_probs=204.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcC----------------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHH
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVE----------------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE   76 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~----------------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   76 (426)
                      +..++|++.++||+|+||.||+|.+..                ++..||+|++....            .......+.+|
T Consensus         2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E   69 (304)
T cd05096           2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA------------NKNARNDFLKE   69 (304)
T ss_pred             CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC------------CHHHHHHHHHH
Confidence            455789999999999999999998632                34479999984421            11234568889


Q ss_pred             HHHHHhcCCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc-----------------CCCCHHHHHHHHHHHHH
Q 014344           77 QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE-----------------QMFSDDTIRFYAAELVL  139 (426)
Q Consensus        77 ~~il~~l~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~-----------------~~l~~~~~~~~~~qil~  139 (426)
                      +.+|.+++||||+++++++.+....|+||||+.+++|.+++.....                 ..++...+..++.||+.
T Consensus        70 ~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~  149 (304)
T cd05096          70 VKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIAS  149 (304)
T ss_pred             HHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998764321                 23677889999999999


Q ss_pred             HHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCC
Q 014344          140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDP  219 (426)
Q Consensus       140 aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (426)
                      ||.|||++||+||||||+|||++.++.+||+|||++..+.....                                    
T Consensus       150 al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~------------------------------------  193 (304)
T cd05096         150 GMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY------------------------------------  193 (304)
T ss_pred             HHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce------------------------------------
Confidence            99999999999999999999999999999999999876532110                                    


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHh
Q 014344          220 VHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY--GATPFRGSSRKETFYRIL  297 (426)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~~~~i~  297 (426)
                                        ........+++.|+|||++.+..++.++|||||||++|+|++  +..||...+..+....+.
T Consensus       194 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~  255 (304)
T cd05096         194 ------------------YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAG  255 (304)
T ss_pred             ------------------eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHH
Confidence                              001122346788999999998889999999999999999986  678888776655443321


Q ss_pred             c---------CCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          298 C---------RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       298 ~---------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .         ........+..+.+||.+||+.||++|||+.+|.+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         256 EFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            0         11122345788999999999999999999999953

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-45  Score=359.71  Aligned_cols=249  Identities=27%  Similarity=0.500  Sum_probs=212.5

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      -+||+|.||+||.|+|..|....|||.+.-             ......+-+..|+.+.+.|.|.|||+++|.+..++++
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpe-------------kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~  647 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPE-------------KDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFF  647 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeeccc-------------ccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeE
Confidence            479999999999999999999999998722             1223456678899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCC--CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec-cCCcEEEecccccccC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMF--SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ-ENGHIMLVDFDLSTKL  178 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l--~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~-~~g~ikL~DFgls~~~  178 (426)
                      -|.||-++||+|.++++... +++  .+.++-+|.+||+.||+|||++.|||||||-+|+|++ -.|.+||+|||-++++
T Consensus       648 kIFMEqVPGGSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRL  726 (1226)
T KOG4279|consen  648 KIFMEQVPGGSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRL  726 (1226)
T ss_pred             EEEeecCCCCcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhh
Confidence            99999999999999988765 346  8899999999999999999999999999999999997 5799999999999887


Q ss_pred             CCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC
Q 014344          179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG  258 (426)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  258 (426)
                      ..-+                                                        -.+.+|.||..|||||++..
T Consensus       727 Agin--------------------------------------------------------P~TETFTGTLQYMAPEvIDq  750 (1226)
T KOG4279|consen  727 AGIN--------------------------------------------------------PCTETFTGTLQYMAPEVIDQ  750 (1226)
T ss_pred             ccCC--------------------------------------------------------ccccccccchhhhChHhhcc
Confidence            4322                                                        13457789999999999975


Q ss_pred             --CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH-h--cCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRI-L--CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       259 --~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i-~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                        .+|+.++|||||||++.||.||++||-..... ....++ +  ..|+.+...+.++++||.+|+.+||.+||+|.++|
T Consensus       751 G~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL  830 (1226)
T KOG4279|consen  751 GPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLL  830 (1226)
T ss_pred             CCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhc
Confidence              56899999999999999999999999765433 333332 2  23444445578899999999999999999999999


Q ss_pred             cCCCcCCC
Q 014344          333 GHEFFKGV  340 (426)
Q Consensus       333 ~hp~f~~~  340 (426)
                      ..||++..
T Consensus       831 ~DpFlq~~  838 (1226)
T KOG4279|consen  831 QDPFLQHN  838 (1226)
T ss_pred             cCcccccC
Confidence            99999864

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1e-43  Score=333.58  Aligned_cols=259  Identities=25%  Similarity=0.422  Sum_probs=212.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||.||++.+..+++.||||++......        .........+..|+.+++.++||||+++++++
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~--------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   73 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES--------PETSKEVNALECEIQLLKNLLHERIVQYYGCL   73 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC--------cccHHHHHHHHHHHHHHHhcCCCCeeeEEeEe
Confidence            5799999999999999999999999999999988432110        01122456788899999999999999999998


Q ss_pred             ec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           96 ST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        96 ~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      .+  ...++++|||++|++|.+++...  ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||
T Consensus        74 ~~~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg  151 (265)
T cd06652          74 RDPMERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFG  151 (265)
T ss_pred             ccCCCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCc
Confidence            76  35788999999999999987654  348899999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++........                                                     .........|+..|+||
T Consensus       152 ~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~y~aP  178 (265)
T cd06652         152 ASKRLQTICL-----------------------------------------------------SGTGMKSVTGTPYWMSP  178 (265)
T ss_pred             cccccccccc-----------------------------------------------------cccccccCCCCccccCh
Confidence            9876532100                                                     00011234588999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |++.+..++.++|+|||||++|+|++|+.||..........++...+.   .....+..+.++|++||. +|++||++++
T Consensus       179 E~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~  257 (265)
T cd06652         179 EVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADE  257 (265)
T ss_pred             hhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHH
Confidence            999988899999999999999999999999988766665555543322   122345678899999994 9999999999


Q ss_pred             HhcCCCcC
Q 014344          331 IKGHEFFK  338 (426)
Q Consensus       331 il~hp~f~  338 (426)
                      +++|||+.
T Consensus       258 il~~~~~~  265 (265)
T cd06652         258 LLRHTFVH  265 (265)
T ss_pred             HhcCcccC
Confidence            99999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=5.9e-44  Score=338.89  Aligned_cols=254  Identities=26%  Similarity=0.422  Sum_probs=207.8

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      ..++|++++.||+|+||.||+|.+..+++.+|+|++....              .....+..|+.+++.+ +||||++++
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~e~~~l~~l~~h~~i~~~~   81 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--------------DIDEEIEAEYNILKALSDHPNVVKFY   81 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--------------chHHHHHHHHHHHHHHhcCCCeeeee
Confidence            4578999999999999999999999999999999874321              1124567799999999 699999999


Q ss_pred             eeee-----cCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           93 GVLS-----TDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        93 ~~~~-----~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      +++.     .+...|+||||++|++|.+++...  ....+++..++.++.|++.||.|||+++|+||||||+||+++.++
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~  161 (286)
T cd06638          82 GMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG  161 (286)
T ss_pred             eeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC
Confidence            9873     456799999999999999887532  234588999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .++|+|||++..+....                                                        .......
T Consensus       162 ~~kl~dfg~~~~~~~~~--------------------------------------------------------~~~~~~~  185 (286)
T cd06638         162 GVKLVDFGVSAQLTSTR--------------------------------------------------------LRRNTSV  185 (286)
T ss_pred             CEEEccCCceeecccCC--------------------------------------------------------Ccccccc
Confidence            99999999987653210                                                        0112335


Q ss_pred             cCCCCccchhhcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHH
Q 014344          246 GTEEYVAPEIIEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRR  316 (426)
Q Consensus       246 gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~  316 (426)
                      |++.|+|||++.+     ..++.++||||+||++|+|++|+.||...........+......    ....+..+.+||.+
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  265 (286)
T cd06638         186 GTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRK  265 (286)
T ss_pred             CCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHH
Confidence            8999999999853     44788999999999999999999999887665544443322211    11235679999999


Q ss_pred             HhccCCCCCCChHHHhcCCCc
Q 014344          317 LLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ||+.||++|||+.||++|+||
T Consensus       266 ~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         266 CLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HccCCcccCCCHHHHhhcccC
Confidence            999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=7.5e-44  Score=339.72  Aligned_cols=255  Identities=23%  Similarity=0.365  Sum_probs=206.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~   94 (426)
                      ++|++.+.||.|+||.||+|.+..+++.||||++.....           .......+.+|+.+++.+. ||||++++++
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~   69 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-----------EEGIPPTALREISLLQMLSESIYIVRLLDV   69 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-----------ccCCchHHHHHHHHHHHccCCCCccceeee
Confidence            469999999999999999999999999999998744311           1123356777999999996 6999999999


Q ss_pred             eecCCe-----EEEEEeccCCCChHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-CC
Q 014344           95 LSTDKF-----VGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-NG  165 (426)
Q Consensus        95 ~~~~~~-----~~lV~Ey~~gg~L~~l~~~~~---~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-~g  165 (426)
                      +.....     .|+||||+++ +|..++....   ...+++..++.++.||+.||.|||++||+||||||+||+++. ++
T Consensus        70 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~  148 (295)
T cd07837          70 EHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG  148 (295)
T ss_pred             EeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCC
Confidence            977665     8999999985 7888766443   235899999999999999999999999999999999999998 88


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++..+....                                                        .......
T Consensus       149 ~~kl~dfg~~~~~~~~~--------------------------------------------------------~~~~~~~  172 (295)
T cd07837         149 LLKIADLGLGRAFSIPV--------------------------------------------------------KSYTHEI  172 (295)
T ss_pred             eEEEeecccceecCCCc--------------------------------------------------------cccCCcc
Confidence            99999999987553110                                                        0111224


Q ss_pred             cCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CC--------------------
Q 014344          246 GTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PP--------------------  301 (426)
Q Consensus       246 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~--------------------  301 (426)
                      +++.|+|||++.+ ..++.++|+|||||++|+|++|..||.+.+..+.+.++...   +.                    
T Consensus       173 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (295)
T cd07837         173 VTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWK  252 (295)
T ss_pred             cccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCccc
Confidence            7888999998865 45789999999999999999999999987766555443211   00                    


Q ss_pred             ------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          302 ------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       302 ------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                            .....+..+.+||.+||.+||.+||+++|++.||||+
T Consensus       253 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         253 PQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             chhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                  0123567799999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=5e-44  Score=341.55  Aligned_cols=257  Identities=26%  Similarity=0.402  Sum_probs=211.1

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||.|+||.||+|.+..+++.||||.+........        .......+..|+.+++.++|+||+++++++.
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~--------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~   72 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEA--------KDGINFTALREIKLLQELKHPNIIGLLDVFG   72 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccc--------cchhhHHHHHHHHHHhhcCCCCChhhhheee
Confidence            48999999999999999999999999999999865432210        1123356677999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      +...+|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~  150 (298)
T cd07841          73 HKSNINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLAR  150 (298)
T ss_pred             cCCEEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeee
Confidence            999999999999 899999987543 359999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                        .......+++.|+|||.+
T Consensus       151 ~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~~  174 (298)
T cd07841         151 SFGSPN--------------------------------------------------------RKMTHQVVTRWYRAPELL  174 (298)
T ss_pred             eccCCC--------------------------------------------------------ccccccccceeeeCHHHH
Confidence            653211                                                        011122467889999998


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----------------------------CCCCC
Q 014344          257 EG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----------------------------DLVGE  306 (426)
Q Consensus       257 ~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----------------------------~~~~~  306 (426)
                      .+ ..++.++|+|||||++|+|++|.+||.+.+..+.+.++.....                             .....
T Consensus       175 ~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (298)
T cd07841         175 FGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAA  254 (298)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccc
Confidence            65 4578999999999999999999999988776554444321100                             01123


Q ss_pred             CHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       307 ~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      +..+.+||.+||.+||++|||+.|++.||||++
T Consensus       255 ~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~  287 (298)
T cd07841         255 SDDALDLLQRLLTLNPNKRITARQALEHPYFSN  287 (298)
T ss_pred             cHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence            567889999999999999999999999999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=7.1e-44  Score=339.92  Aligned_cols=258  Identities=26%  Similarity=0.413  Sum_probs=210.3

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++.+.||.|++|+||+|.+..+++.||+|.+.....           .......+..|+.+++.++||||++++++
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   69 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-----------DEGVPSTAIREISLLKEMQHGNIVRLQDV   69 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-----------cccchHHHHHHHHHHHhccCCCEeeEEEE
Confidence            4679999999999999999999999999999998743211           11234567789999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-CCcEEEeccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-NGHIMLVDFD  173 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-~g~ikL~DFg  173 (426)
                      +......|+||||+. ++|..++.......+++..++.++.||+.||+|||++||+||||+|+||+++. ++.+||+|||
T Consensus        70 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg  148 (294)
T PLN00009         70 VHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFG  148 (294)
T ss_pred             EecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccc
Confidence            999999999999996 57877766554445788999999999999999999999999999999999985 5679999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        .......|++.|+||
T Consensus       149 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~P  172 (294)
T PLN00009        149 LARAFGIPV--------------------------------------------------------RTFTHEVVTLWYRAP  172 (294)
T ss_pred             cccccCCCc--------------------------------------------------------cccccCceeecccCH
Confidence            987543110                                                        011223578899999


Q ss_pred             hhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC---------------------------C
Q 014344          254 EIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP---------------------------D  302 (426)
Q Consensus       254 E~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~---------------------------~  302 (426)
                      |++.+. .++.++||||+||++|+|++|++||...+..+...++..   .+.                           .
T Consensus       173 E~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (294)
T PLN00009        173 EILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATV  252 (294)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHh
Confidence            998764 578999999999999999999999988776655544321   100                           0


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ....+..+.++|.+||..+|++||++.+++.||||.++
T Consensus       253 ~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        253 VPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             CcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence            12346778999999999999999999999999999764

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-45  Score=369.04  Aligned_cols=260  Identities=22%  Similarity=0.352  Sum_probs=208.6

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      +.-.+++|.+.|.+|||+.||+|++...+..||+|.+..             .+...++.+.+|+++|++|+ |+|||.+
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~-------------~de~~L~~v~~EI~~MK~L~gh~nIV~y  100 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV-------------NDEEALNAVKREIDIMKLLSGHKNIVSY  100 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec-------------CCHHHHHHHHHHHHHHHHhcCCCceeeE
Confidence            334568999999999999999999998889999998832             23456788999999999998 9999999


Q ss_pred             eeeee------c-CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeeec
Q 014344           92 RGVLS------T-DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQ  162 (426)
Q Consensus        92 ~~~~~------~-~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiLl~  162 (426)
                      ++...      . .-.++|.||||.||.|-+++..+....|++.++..|+.|++.|+.+||...  |||||||-|||||.
T Consensus       101 idss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls  180 (738)
T KOG1989|consen  101 IDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS  180 (738)
T ss_pred             eccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc
Confidence            99431      1 135789999999999999988665556999999999999999999999987  99999999999999


Q ss_pred             cCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          163 ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       163 ~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                      .+|+.||||||.++...............+                                               ..-
T Consensus       181 ~~g~~KLCDFGSatt~~~~~~~~~e~~~ve-----------------------------------------------~eI  213 (738)
T KOG1989|consen  181 ADGNYKLCDFGSATTKILSPTSAQEVNYVE-----------------------------------------------EEI  213 (738)
T ss_pred             CCCCEEeCcccccccccCCCccHHHHHHHH-----------------------------------------------HHH
Confidence            999999999999886543221111100011                                               111


Q ss_pred             ccccCCCCccchhh---cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhc
Q 014344          243 SFVGTEEYVAPEII---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       243 ~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~  319 (426)
                      ....|+.|+|||++   .+.+.+.++|||||||+||.||+...||.......++.-. +..|.....+..+++||+.||+
T Consensus       214 ~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~-Y~~P~~p~ys~~l~~LI~~mL~  292 (738)
T KOG1989|consen  214 EKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGN-YSFPPFPNYSDRLKDLIRTMLQ  292 (738)
T ss_pred             HhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEecc-ccCCCCccHHHHHHHHHHHHhc
Confidence            22369999999986   5788899999999999999999999999887544322221 3334445678889999999999


Q ss_pred             cCCCCCCChHHHhc
Q 014344          320 KDPTKRIGVEEIKG  333 (426)
Q Consensus       320 ~dP~~R~s~~eil~  333 (426)
                      .||.+||++-+++.
T Consensus       293 ~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  293 PNPDERPNIYQVLE  306 (738)
T ss_pred             cCcccCCCHHHHHH
Confidence            99999999988864

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.1e-43  Score=338.03  Aligned_cols=266  Identities=41%  Similarity=0.724  Sum_probs=216.9

Q ss_pred             CcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      +|++.+.||.|+||.||+|++.   .+|+.||+|++........         ....+.+..|+.+++.+ +|++|+.++
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~~~~~i~~~~   71 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQK---------AKTTEHTRTERQVLEHIRQSPFLVTLH   71 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhc---------chHHHHHHHHHHHHHhcccCCChhcee
Confidence            4899999999999999999985   4789999999865433211         12345677899999999 589999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++|..+..+|+||||+++++|.+++...  ..+++..+..++.|++.||.|||+.|++||||||+|||++.++.+||+||
T Consensus        72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~df  149 (290)
T cd05613          72 YAFQTDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF  149 (290)
T ss_pred             eEeecCCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeC
Confidence            9999999999999999999999987754  34899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                       ........|+..|+|
T Consensus       150 g~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~a  174 (290)
T cd05613         150 GLSKEFHEDE-------------------------------------------------------VERAYSFCGTIEYMA  174 (290)
T ss_pred             ccceeccccc-------------------------------------------------------ccccccccCCcccCC
Confidence            9987643211                                                       011223468899999


Q ss_pred             chhhcCC--CCChhhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcC-CCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          253 PEIIEGK--GHDFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCR-PPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       253 PE~~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~-~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      ||.+.+.  .++.++|||||||++|+|++|..||.....    .+....+... ++.....+..+.+++.+||+.||++|
T Consensus       175 PE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R  254 (290)
T cd05613         175 PDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKR  254 (290)
T ss_pred             hhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHh
Confidence            9998753  467899999999999999999999975332    2333333322 22333457889999999999999999


Q ss_pred             C-----ChHHHhcCCCcCCCChhhhhhc
Q 014344          326 I-----GVEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       326 ~-----s~~eil~hp~f~~~~~~~~~~~  348 (426)
                      +     ++++++.||||+..+|+.+...
T Consensus       255 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~  282 (290)
T cd05613         255 LGCGPSDADEIKKHPFFQKINWDDLAAK  282 (290)
T ss_pred             cCCCCCCHHHHHcCcccccCCHHHHhhc
Confidence            7     7999999999999999887443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.6e-44  Score=340.36  Aligned_cols=255  Identities=28%  Similarity=0.445  Sum_probs=214.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      |+.++|++++.||+|+||+||++.+..+++.||+|++....            .......+.+|+++++.++||||++++
T Consensus         2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~i~~~~   69 (284)
T cd06620           2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA------------KSSVRKQILRELQIMHECRSPYIVSFY   69 (284)
T ss_pred             ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC------------cchHHHHHHHHHHHHHHcCCCCcceEe
Confidence            56788999999999999999999999999999999984321            122346788899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEec
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +.+.....+|+||||+++++|..++...  +.+++..++.++.|++.||.|||+ .|++||||||+||+++.++.++|+|
T Consensus        70 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d  147 (284)
T cd06620          70 GAFLNENNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCD  147 (284)
T ss_pred             eeEecCCEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEcc
Confidence            9999999999999999999999887653  358999999999999999999997 6999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++......                                                          .....+||..|+
T Consensus       148 ~gl~~~~~~~----------------------------------------------------------~~~~~~~~~~~~  169 (284)
T cd06620         148 FGVSGELINS----------------------------------------------------------IADTFVGTSTYM  169 (284)
T ss_pred             CCcccchhhh----------------------------------------------------------ccCccccCcccC
Confidence            9987654210                                                          112346899999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHhcCC-CCC--CCCCHHHHHHHHHH
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-----------ETFYRILCRP-PDL--VGEPTPLRNLIRRL  317 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-----------~~~~~i~~~~-~~~--~~~~~~~~~li~~~  317 (426)
                      |||++.+..++.++|+|||||++|+|++|+.||......           +....+.... +..  ...+..+.+||.+|
T Consensus       170 aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  249 (284)
T cd06620         170 SPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDAC  249 (284)
T ss_pred             CHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHH
Confidence            999998888999999999999999999999999865542           2233333222 111  12567899999999


Q ss_pred             hccCCCCCCChHHHhcCCCcCC
Q 014344          318 LEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       318 L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      |..||.+|||++|+++||||..
T Consensus       250 l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         250 LLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             hcCCcccCcCHHHHhcCccccc
Confidence            9999999999999999999853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.3e-43  Score=331.86  Aligned_cols=254  Identities=25%  Similarity=0.388  Sum_probs=214.0

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||.|+||.||+|.+..+++.||+|++......           .....++..|+.+++.++||||+++++.+.
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-----------EKEKQQLVSEVNILRELKHPNIVRYYDRII   69 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-----------HHHHHHHHHHHHHHHhcCCCccceeeeeee
Confidence            589999999999999999999999999999998543221           123457788999999999999999999775


Q ss_pred             --cCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH-----HCCCcccCCCCCCeeeccCCcE
Q 014344           97 --TDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLH-----NMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        97 --~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH-----~~giiHrDlKp~NiLl~~~g~i  167 (426)
                        ....+|++|||+++++|.+++...  ....+++..+..++.||+.||+|||     +.+|+||||||+||+++.++.+
T Consensus        70 ~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~  149 (265)
T cd08217          70 DRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNV  149 (265)
T ss_pred             cCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCE
Confidence              345789999999999999987653  2346899999999999999999999     8999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++.......                                                        .......|+
T Consensus       150 kl~d~g~~~~~~~~~--------------------------------------------------------~~~~~~~~~  173 (265)
T cd08217         150 KLGDFGLAKILGHDS--------------------------------------------------------SFAKTYVGT  173 (265)
T ss_pred             EEecccccccccCCc--------------------------------------------------------ccccccccC
Confidence            999999987653211                                                        012234589


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      +.|+|||++.+..++.++|+||||+++|+|++|+.||...+.......+.....  .....+..+.+++.+||..+|.+|
T Consensus       174 ~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R  253 (265)
T cd08217         174 PYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKR  253 (265)
T ss_pred             CCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccC
Confidence            999999999998899999999999999999999999998876655555543322  223457889999999999999999


Q ss_pred             CChHHHhcCCCc
Q 014344          326 IGVEEIKGHEFF  337 (426)
Q Consensus       326 ~s~~eil~hp~f  337 (426)
                      |++++|++|||+
T Consensus       254 p~~~~il~~~~~  265 (265)
T cd08217         254 PSTEELLQLPLI  265 (265)
T ss_pred             CCHHHHhhCCCC
Confidence            999999999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=2.8e-44  Score=354.34  Aligned_cols=257  Identities=19%  Similarity=0.305  Sum_probs=207.2

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCC-----ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-C
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESS-----ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-E   84 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~   84 (426)
                      +.+..++|++++.||+|+||.||+|++..++     ..||+|++....            .......+.+|+.+++.+ +
T Consensus        33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~il~~l~~  100 (374)
T cd05106          33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA------------HTDEREALMSELKILSHLGQ  100 (374)
T ss_pred             ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC------------CHHHHHHHHHHHHHHHhhcc
Confidence            4566778999999999999999999975443     579999984331            112345678899999999 8


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc-------------------------------------------
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-------------------------------------------  121 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~-------------------------------------------  121 (426)
                      ||||+++++++.....+|+|||||++|+|.+++....                                           
T Consensus       101 h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (374)
T cd05106         101 HKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDT  180 (374)
T ss_pred             CCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccc
Confidence            9999999999999999999999999999999875432                                           


Q ss_pred             -------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344          122 -------------------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus       122 -------------------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                                               ...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~  260 (374)
T cd05106         181 YVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLAR  260 (374)
T ss_pred             ccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeee
Confidence                                     1247888999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+.....                                                      ........+++.|||||++
T Consensus       261 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~  286 (374)
T cd05106         261 DIMNDSN------------------------------------------------------YVVKGNARLPVKWMAPESI  286 (374)
T ss_pred             eccCCcc------------------------------------------------------eeeccCCCCccceeCHHHh
Confidence            6532110                                                      0011122356789999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      .+..++.++|||||||++|+|++ |+.||........+......   +......+.++.++|.+||+.||.+|||+.+|+
T Consensus       287 ~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~  366 (374)
T cd05106         287 FDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQIS  366 (374)
T ss_pred             cCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            98899999999999999999997 99999876654444443322   122223478899999999999999999999997


Q ss_pred             c
Q 014344          333 G  333 (426)
Q Consensus       333 ~  333 (426)
                      +
T Consensus       367 ~  367 (374)
T cd05106         367 Q  367 (374)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=7.4e-44  Score=335.41  Aligned_cols=243  Identities=27%  Similarity=0.429  Sum_probs=199.9

Q ss_pred             CCcEEEeee--cccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           16 SCLRIVSAL--GRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        16 ~~y~i~~~L--G~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      ++|++.+.+  |+|+||.||+++++.+++.+|+|++.+.....                .  |+.+...+ +||||++++
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----------------~--e~~~~~~~~~h~~iv~~~   75 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----------------I--EPMVHQLMKDNPNFIKLY   75 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----------------h--hHHHHHHhhcCCCEEEEE
Confidence            457777776  99999999999999999999999985432110                0  22223222 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-cEEEec
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-HIMLVD  171 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-~ikL~D  171 (426)
                      +.|...+.+|+||||++|++|.+++....  .+++..++.++.||+.||.|||+.|++||||||+||+++.++ .++|+|
T Consensus        76 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~d  153 (267)
T PHA03390         76 YSVTTLKGHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCD  153 (267)
T ss_pred             EEEecCCeeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEec
Confidence            99999999999999999999999987653  599999999999999999999999999999999999999998 999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.....                                                            .....|++.|+
T Consensus       154 fg~~~~~~~------------------------------------------------------------~~~~~~~~~y~  173 (267)
T PHA03390        154 YGLCKIIGT------------------------------------------------------------PSCYDGTLDYF  173 (267)
T ss_pred             CccceecCC------------------------------------------------------------CccCCCCCccc
Confidence            998865421                                                            11224788999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCC-CCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET----FYRILCRP-PDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~----~~~i~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..++.++|+||+||++|+|++|..||........    +....... +.....++.+.+||.+||+.+|.+|+
T Consensus       174 aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  253 (267)
T PHA03390        174 SPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRL  253 (267)
T ss_pred             ChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCC
Confidence            99999999999999999999999999999999986543321    22222222 22335688999999999999999999


Q ss_pred             C-hHHHhcCCCcC
Q 014344          327 G-VEEIKGHEFFK  338 (426)
Q Consensus       327 s-~~eil~hp~f~  338 (426)
                      + +++||+||||+
T Consensus       254 ~~~~~~l~h~~~~  266 (267)
T PHA03390        254 TNYNEIIKHPFLK  266 (267)
T ss_pred             chHHHHhcCCccc
Confidence            6 69999999996

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.4e-43  Score=330.61  Aligned_cols=254  Identities=27%  Similarity=0.424  Sum_probs=215.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||+|+||.||++.++.++..+|+|.+.......           ...+.+.+|+.+++.++||||+++++.+.
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~E~~~l~~~~h~~i~~~~~~~~   69 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-----------KEKEASKKEVILLAKMKHPNIVTFFASFQ   69 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-----------hhhHHHHHHHHHHHhCCCCChhhhhheec
Confidence            5899999999999999999999999999999985543211           12346678999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc-EEEeccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH-IMLVDFDLS  175 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~-ikL~DFgls  175 (426)
                      .....|+|+||+++++|.+++.......+++..+..++.|++.||.|||+.+++||||||+||+++.++. ++|+|||.+
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~  149 (257)
T cd08225          70 ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIA  149 (257)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccc
Confidence            9999999999999999999887655556899999999999999999999999999999999999998864 699999988


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        .......|++.|+|||.
T Consensus       150 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~ape~  173 (257)
T cd08225         150 RQLNDSM--------------------------------------------------------ELAYTCVGTPYYLSPEI  173 (257)
T ss_pred             hhccCCc--------------------------------------------------------ccccccCCCccccCHHH
Confidence            7653211                                                        01122358899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+..++.++|+|||||++|+|++|..||...+..+....+....  +.....+..+.++|.+||..+|++|||+.++++
T Consensus       174 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         174 CQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            988889999999999999999999999999887776666554332  222345778999999999999999999999999


Q ss_pred             CCCc
Q 014344          334 HEFF  337 (426)
Q Consensus       334 hp~f  337 (426)
                      ||||
T Consensus       254 ~~~~  257 (257)
T cd08225         254 RPFL  257 (257)
T ss_pred             CCCC
Confidence            9997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1.7e-43  Score=336.89  Aligned_cols=253  Identities=26%  Similarity=0.390  Sum_probs=202.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||.||+|.+..+++.||+|++.....            ......+.+|+.+++.++|+||++++++
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~ni~~~~~~   71 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE------------EGVPFTAIREASLLKGLKHANIVLLHDI   71 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc------------CCCcHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            3679999999999999999999999999999999843311            1112355679999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +..+...|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.++|+|||+
T Consensus        72 ~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~  149 (291)
T cd07870          72 IHTKETLTFVFEYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGL  149 (291)
T ss_pred             EecCCeEEEEEeccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEecccc
Confidence            999999999999996 67776654433 3478899999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        ......++++.|+|||
T Consensus       150 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE  173 (291)
T cd07870         150 ARAKSIPS--------------------------------------------------------QTYSSEVVTLWYRPPD  173 (291)
T ss_pred             ccccCCCC--------------------------------------------------------CCCCCccccccccCCc
Confidence            86532110                                                        0112235788999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhc---CC-----------C-----------------
Q 014344          255 IIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILC---RP-----------P-----------------  301 (426)
Q Consensus       255 ~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~---~~-----------~-----------------  301 (426)
                      ++.+ ..++.++|+|||||++|+|++|..||.+.+.. +.+..+..   .+           +                 
T Consensus       174 ~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (291)
T cd07870         174 VLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRV  253 (291)
T ss_pred             eeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhh
Confidence            9876 45788999999999999999999999865532 22222110   00           0                 


Q ss_pred             --CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          302 --DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       302 --~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                        .....+..+.+||.+||..||++|||+++++.||||
T Consensus       254 ~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         254 VWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence              001225678899999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-43  Score=345.37  Aligned_cols=256  Identities=28%  Similarity=0.422  Sum_probs=205.5

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|.+..+++.||||++....            ......++..|+.+++.++||||+++++++
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   72 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE------------HQTFCQRTLREIKILRRFKHENIIGILDII   72 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc------------cchhHHHHHHHHHHHHhCCCCCcCchhhee
Confidence            57999999999999999999999999999999984211            112345677899999999999999999887


Q ss_pred             ecC-----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           96 STD-----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        96 ~~~-----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ...     ..+|+|+||+. ++|..++..   +.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+
T Consensus        73 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~  148 (336)
T cd07849          73 RPPSFESFNDVYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKIC  148 (336)
T ss_pred             ecccccccceEEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEC
Confidence            544     35899999996 578776643   359999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++........                                                     ........+||+.|
T Consensus       149 dfg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~y  175 (336)
T cd07849         149 DFGLARIADPEHD-----------------------------------------------------HTGFLTEYVATRWY  175 (336)
T ss_pred             cccceeecccccc-----------------------------------------------------ccCCcCCcCcCCCc
Confidence            9999876532110                                                     00012234689999


Q ss_pred             ccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCC-----------------------C--
Q 014344          251 VAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP-----------------------P--  301 (426)
Q Consensus       251 ~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~~-----------------------~--  301 (426)
                      +|||.+.+ ..++.++||||+||++|+|++|++||.+.+.......+.   ..+                       +  
T Consensus       176 ~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (336)
T cd07849         176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKV  255 (336)
T ss_pred             cChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcc
Confidence            99998765 568899999999999999999999998766543332221   000                       0  


Q ss_pred             ----CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 ----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 ----~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                          .....+..+.+||.+||+.+|++|||+.+++.||||+..
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         256 PWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             cHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence                012346678999999999999999999999999999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=5.1e-44  Score=352.65  Aligned_cols=257  Identities=20%  Similarity=0.319  Sum_probs=206.8

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEE-----cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CC
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKD-----VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EH   85 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h   85 (426)
                      .+..++|++.+.||+|+||+||+|.+     ..++..||+|++....            .......+.+|+.+|+.+ +|
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~------------~~~~~~~~~~Ei~il~~l~~H   98 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA------------HLTEREALMSELKVLSYLGNH   98 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc------------CcHHHHHHHHHHHHHHHhcCC
Confidence            34456899999999999999999974     3456789999984321            112345678899999999 79


Q ss_pred             CCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------------------------------------
Q 014344           86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------------------------------------  121 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------------------------------------  121 (426)
                      |||+++++++......|+|||||+||+|.+++....                                            
T Consensus        99 pnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  178 (375)
T cd05104          99 INIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYV  178 (375)
T ss_pred             cceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccc
Confidence            999999999999999999999999999999876432                                            


Q ss_pred             -----------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344          122 -----------------------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus       122 -----------------------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                                                   ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Df  258 (375)
T cd05104         179 VPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDF  258 (375)
T ss_pred             cccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecC
Confidence                                         124788889999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++........                                                      ........++..|+|
T Consensus       259 G~a~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~a  284 (375)
T cd05104         259 GLARDIRNDSN------------------------------------------------------YVVKGNARLPVKWMA  284 (375)
T ss_pred             ccceeccCccc------------------------------------------------------ccccCCCCCCcceeC
Confidence            99876532110                                                      000112235678999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      ||++.+..++.++|||||||++|+|++ |..||........+.+.+..   .......+.++.+||.+||..||++|||+
T Consensus       285 PE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~  364 (375)
T cd05104         285 PESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTF  364 (375)
T ss_pred             hhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCH
Confidence            999999999999999999999999997 99999876654444444322   12223347789999999999999999999


Q ss_pred             HHHhcC
Q 014344          329 EEIKGH  334 (426)
Q Consensus       329 ~eil~h  334 (426)
                      .+|++.
T Consensus       365 ~eil~~  370 (375)
T cd05104         365 KQIVQL  370 (375)
T ss_pred             HHHHHH
Confidence            999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-46  Score=352.59  Aligned_cols=260  Identities=27%  Similarity=0.427  Sum_probs=221.4

Q ss_pred             cEEE--eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           18 LRIV--SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        18 y~i~--~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      |+|.  ++||+|.||+||-+.++.+|+.||||+++|..+..+           +...+..|+.||+.+.||.||.+...|
T Consensus       564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-----------qesqlR~EVaILq~l~HPGiV~le~M~  632 (888)
T KOG4236|consen  564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-----------QESQLRNEVAILQNLHHPGIVNLECMF  632 (888)
T ss_pred             HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-----------hHHHHHHHHHHHHhcCCCCeeEEEEee
Confidence            5554  789999999999999999999999999988877654           225677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC---CcEEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN---GHIMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~---g~ikL~DF  172 (426)
                      ++.+.++.|||-+. ||...++-....+++++...++++.||+.||.|||-++|+|.||||||||+.+.   -.+|||||
T Consensus       633 ET~ervFVVMEKl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDF  711 (888)
T KOG4236|consen  633 ETPERVFVVMEKLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDF  711 (888)
T ss_pred             cCCceEEEEehhhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccc
Confidence            99999999999997 555555555555679999999999999999999999999999999999999754   37999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.+...                                                         ....+.+|||.|+|
T Consensus       712 GfARiIgEk---------------------------------------------------------sFRrsVVGTPAYLa  734 (888)
T KOG4236|consen  712 GFARIIGEK---------------------------------------------------------SFRRSVVGTPAYLA  734 (888)
T ss_pred             cceeecchh---------------------------------------------------------hhhhhhcCCccccC
Confidence            999987532                                                         23456799999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHH--hcCCCCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS-RKETFYRI--LCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||+++.++|..+-|+||+|||+|--+.|..||.... ..++.++.  +..+..+.+.+..+.|||..+|+..-.+|.|++
T Consensus       735 PEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvd  814 (888)
T KOG4236|consen  735 PEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVD  814 (888)
T ss_pred             HHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchH
Confidence            999999999999999999999999999999997543 33443332  334444556688899999999999999999999


Q ss_pred             HHhcCCCcCCC-Chhhhh
Q 014344          330 EIKGHEFFKGV-NWELLL  346 (426)
Q Consensus       330 eil~hp~f~~~-~~~~~~  346 (426)
                      ..|.|||+++. -|.++.
T Consensus       815 k~lsh~Wlq~yq~w~DLR  832 (888)
T KOG4236|consen  815 KSLSHPWLQDYQTWLDLR  832 (888)
T ss_pred             hhccchhhhcchHHHHHH
Confidence            99999999985 465553

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.7e-43  Score=331.17  Aligned_cols=253  Identities=18%  Similarity=0.301  Sum_probs=212.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      +.+..++|+++++||+|+||.||+|... +++.||+|.+....              ...+.+..|+.+++.++||||++
T Consensus         1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~--------------~~~~~~~~e~~~l~~l~h~~i~~   65 (261)
T cd05072           1 WEIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT--------------MSVQAFLEEANLMKTLQHDKLVR   65 (261)
T ss_pred             CcCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc--------------hhHHHHHHHHHHHHhCCCCCeee
Confidence            3567789999999999999999999864 56779999874321              12356788999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++......|++|||+++++|.+++.......++...+..++.|++.||+|||+.|++||||||+||+++.++.++|+
T Consensus        66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~  145 (261)
T cd05072          66 LYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIA  145 (261)
T ss_pred             EEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEEC
Confidence            99999999999999999999999999877655668999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++........                                                       .......++..|
T Consensus       146 dfg~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y  170 (261)
T cd05072         146 DFGLARVIEDNEY-------------------------------------------------------TAREGAKFPIKW  170 (261)
T ss_pred             CCccceecCCCce-------------------------------------------------------eccCCCccceec
Confidence            9999876532110                                                       001112356789


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      +|||.+.+..++.++|||||||++|+|++ |..||...........+...  .+.....+..+.++|.+||..+|++||+
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  250 (261)
T cd05072         171 TAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPT  250 (261)
T ss_pred             CCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence            99999998889999999999999999998 99999988776666555432  2333456788999999999999999999


Q ss_pred             hHHHhc
Q 014344          328 VEEIKG  333 (426)
Q Consensus       328 ~~eil~  333 (426)
                      ++++++
T Consensus       251 ~~~i~~  256 (261)
T cd05072         251 FDYLQS  256 (261)
T ss_pred             HHHHHH
Confidence            999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=9.1e-44  Score=337.68  Aligned_cols=254  Identities=27%  Similarity=0.465  Sum_probs=210.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.....           .......+..|+.+++.++|+||+++++++
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   69 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-----------DEDVKKTALREVKVLRQLRHENIVNLKEAF   69 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-----------cccchhHHHHHHHHHHhcCCCCeeehhheE
Confidence            369999999999999999999999999999998854321           122346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..++..|+||||++++.+..+....  ..+++..+..++.||+.||.|||+.|++||||+|+||+++.++.+||+|||++
T Consensus        70 ~~~~~~~iv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~  147 (288)
T cd07833          70 RRKGRLYLVFEYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFA  147 (288)
T ss_pred             EECCEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecc
Confidence            9999999999999987777655432  34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ........                                                       ......+++..|+|||+
T Consensus       148 ~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~~PE~  172 (288)
T cd07833         148 RALRARPA-------------------------------------------------------SPLTDYVATRWYRAPEL  172 (288)
T ss_pred             cccCCCcc-------------------------------------------------------ccccCcccccCCcCCch
Confidence            76542110                                                       01223468899999999


Q ss_pred             hcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--------------CCC------------------C
Q 014344          256 IEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--------------RPP------------------D  302 (426)
Q Consensus       256 ~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~--------------~~~------------------~  302 (426)
                      +.+. .++.++|+|||||++|+|++|++||.+.+..+....+..              ...                  .
T Consensus       173 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (288)
T cd07833         173 LVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERR  252 (288)
T ss_pred             hcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHh
Confidence            9887 889999999999999999999999987765544332210              000                  0


Q ss_pred             CC-CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          303 LV-GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       303 ~~-~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      .. ..+..+.+||++||..+|++|||+++++.||||
T Consensus       253 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         253 YPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            01 126778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1e-43  Score=335.97  Aligned_cols=254  Identities=27%  Similarity=0.426  Sum_probs=215.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|+.++.||.|+||.||+|.+..+++.||||++.....            ......+..|+.+++.+.||||+++++++
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA------------EDEIEDIQQEITVLSQCDSPYVTKYYGSY   71 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc------------HHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            358899999999999999999999999999999854321            12346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .++...|+||||+.|++|.+++..   ..+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++
T Consensus        72 ~~~~~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~  148 (277)
T cd06640          72 LKGTKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA  148 (277)
T ss_pred             EECCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccc
Confidence            999999999999999999998764   34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                        .......++..|+|||+
T Consensus       149 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~apE~  172 (277)
T cd06640         149 GQLTDTQ--------------------------------------------------------IKRNTFVGTPFWMAPEV  172 (277)
T ss_pred             eeccCCc--------------------------------------------------------cccccccCcccccCHhH
Confidence            7653211                                                        01122357888999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCC-CCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPD-LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+..++.++|+|||||++|+|++|.+||...........+... ++. ....+..+.+||.+||..+|++||++.+++.
T Consensus       173 ~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06640         173 IQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK  252 (277)
T ss_pred             hccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence            99888999999999999999999999999887766655544322 121 2234678999999999999999999999999


Q ss_pred             CCCcCCC
Q 014344          334 HEFFKGV  340 (426)
Q Consensus       334 hp~f~~~  340 (426)
                      ||||...
T Consensus       253 ~~~~~~~  259 (277)
T cd06640         253 HKFIVKN  259 (277)
T ss_pred             ChHhhhc
Confidence            9999653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.1e-43  Score=336.52  Aligned_cols=257  Identities=28%  Similarity=0.449  Sum_probs=205.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHH-HHhcCCCCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV-LRNVEHPLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i-l~~l~hp~iv~l~~~   94 (426)
                      ++|++++.||+|+||.||+|++..+|+.||||++.+....            .....+..|+.+ ++.++||||++++++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~e~~~~~~~~~~~~iv~~~~~   68 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS------------QEQKRLLMDLDISMRSVDCPYTVTFYGA   68 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc------------HHHHHHHHHHHHHHHHcCCCCeeeeeEE
Confidence            4799999999999999999999999999999998543211            112334445554 666789999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeeccCCcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +..+..+|++|||++ ++|.+++...  ....+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|
T Consensus        69 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~d  147 (283)
T cd06617          69 LFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCD  147 (283)
T ss_pred             EecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEee
Confidence            999999999999996 7888776542  234689999999999999999999997 999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+....                                                         ..+...|+..|+
T Consensus       148 fg~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~  170 (283)
T cd06617         148 FGISGYLVDSV---------------------------------------------------------AKTIDAGCKPYM  170 (283)
T ss_pred             ccccccccccc---------------------------------------------------------ccccccCCcccc
Confidence            99987542110                                                         111235788999


Q ss_pred             cchhhcC----CCCChhhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCC-CCC--CCCCHHHHHHHHHHhccCCC
Q 014344          252 APEIIEG----KGHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRILCRP-PDL--VGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       252 aPE~~~~----~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~-~~~--~~~~~~~~~li~~~L~~dP~  323 (426)
                      |||.+.+    ..++.++|+|||||++|+|++|+.||... ...+....+.... +..  ...+..+.+||.+||..+|.
T Consensus       171 aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  250 (283)
T cd06617         171 APERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYK  250 (283)
T ss_pred             ChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChh
Confidence            9999865    45688999999999999999999999753 2233344443322 222  23578899999999999999


Q ss_pred             CCCChHHHhcCCCcCCCCh
Q 014344          324 KRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       324 ~R~s~~eil~hp~f~~~~~  342 (426)
                      +||++++++.||||....+
T Consensus       251 ~Rp~~~~il~~~~~~~~~~  269 (283)
T cd06617         251 ERPNYPELLQHPFFELHLS  269 (283)
T ss_pred             hCcCHHHHhcCchhhhccc
Confidence            9999999999999986543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=7.6e-44  Score=339.57  Aligned_cols=254  Identities=25%  Similarity=0.383  Sum_probs=208.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++.+.||.|+||.||+|.+..+++.+|+|.+......           ......+.+|+.++++++||||++++++
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~ni~~~~~~   72 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-----------EGFPITSLREINILLKLQHPNIVTVKEV   72 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-----------ccchhhHHHHHHHHHhcCCCCEEEEEEE
Confidence            46799999999999999999999999999999998543211           1223456679999999999999999999


Q ss_pred             eecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           95 LSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        95 ~~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +...  ...|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+||
T Consensus        73 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~  150 (293)
T cd07843          73 VVGSNLDKIYMVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDF  150 (293)
T ss_pred             EEecCCCcEEEEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeec
Confidence            8877  89999999997 58988876543 35899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+....                                                        .......+++.|+|
T Consensus       151 g~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~a  174 (293)
T cd07843         151 GLAREYGSPL--------------------------------------------------------KPYTQLVVTLWYRA  174 (293)
T ss_pred             CceeeccCCc--------------------------------------------------------cccccccccccccC
Confidence            9987653210                                                        01122347889999


Q ss_pred             chhhcCCC-CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------------------------------
Q 014344          253 PEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-------------------------------  300 (426)
Q Consensus       253 PE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-------------------------------  300 (426)
                      ||.+.+.. ++.++|+|||||++|+|++|.+||...+....+.++....                               
T Consensus       175 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (293)
T cd07843         175 PELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLR  254 (293)
T ss_pred             chhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhh
Confidence            99987654 6889999999999999999999998877665544432100                               


Q ss_pred             CCCCC--CCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          301 PDLVG--EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       301 ~~~~~--~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ..+..  .+..+.+||++||+.+|++|||+.|++.||||
T Consensus       255 ~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         255 KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             ccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            00111  36678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.5e-43  Score=338.22  Aligned_cols=259  Identities=24%  Similarity=0.352  Sum_probs=204.2

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|+++++||+|+||.||+|.+..+++.||||++.....           .......+..|+.+++.++||||+++++
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~iv~~~~   78 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-----------KEGFPITALREIKILQLLKHENVVNLIE   78 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-----------cCCchhHHHHHHHHHHhCCCCCccceEE
Confidence            45689999999999999999999999999999998843221           1112234567999999999999999999


Q ss_pred             eeecCC--------eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           94 VLSTDK--------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        94 ~~~~~~--------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      ++....        ..|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+||+++.++
T Consensus        79 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~  156 (310)
T cd07865          79 ICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDG  156 (310)
T ss_pred             EEecccccccCCCceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCC
Confidence            886543        4599999996 57877765443 3589999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++..+......                                                    ........+
T Consensus       157 ~~kl~dfg~~~~~~~~~~~----------------------------------------------------~~~~~~~~~  184 (310)
T cd07865         157 ILKLADFGLARAFSLSKNS----------------------------------------------------KPNRYTNRV  184 (310)
T ss_pred             cEEECcCCCcccccCCccc----------------------------------------------------CCCCccCcc
Confidence            9999999999865421100                                                    001112345


Q ss_pred             cCCCCccchhhcCCC-CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC--------------------
Q 014344          246 GTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP--------------------  301 (426)
Q Consensus       246 gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~--------------------  301 (426)
                      ++..|+|||.+.+.. ++.++|+|||||++|+|++|++||.+.+.......+..   ..+                    
T Consensus       185 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (310)
T cd07865         185 VTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQ  264 (310)
T ss_pred             cCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCC
Confidence            788999999987643 68899999999999999999999988765543322211   000                    


Q ss_pred             C----------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          302 D----------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       302 ~----------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      .          ....+..+.+||.+||..||.+|||++++++||||
T Consensus       265 ~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         265 GQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             ccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            0          00124567899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=3e-43  Score=334.65  Aligned_cols=270  Identities=41%  Similarity=0.728  Sum_probs=217.7

Q ss_pred             CcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      +|++.+.||+|++|.||+|++.   .+++.||||++.+.....+         ......+..|+.++..+ +||+|++++
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~---------~~~~~~~~~E~~~l~~~~~~~~i~~~~   71 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQK---------AKTAEHTRTERQVLEAVRRCPFLVTLH   71 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhh---------hhHHHHHHHHHHHHHhccCCcchhhhh
Confidence            4899999999999999999864   4678999999876433221         12345677899999999 599999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +.+.....+|+||||+.|++|.+++...  ..+++..++.++.|++.||.|||+.|++||||||+||+++.++.++|+||
T Consensus        72 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~df  149 (288)
T cd05583          72 YAFQTDTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDF  149 (288)
T ss_pred             eeeecCCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEEC
Confidence            9999999999999999999999887653  34899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+....                                                       ........|++.|+|
T Consensus       150 g~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y~a  174 (288)
T cd05583         150 GLSKEFLAEE-------------------------------------------------------EERAYSFCGTIEYMA  174 (288)
T ss_pred             cccccccccc-------------------------------------------------------ccccccccCCccccC
Confidence            9987653211                                                       011123458899999


Q ss_pred             chhhcCCC--CChhhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcC-CCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          253 PEIIEGKG--HDFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCR-PPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       253 PE~~~~~~--~~~~~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~-~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      ||.+.+..  ++.++|+||||+++|+|++|..||.....    .+....+... ++.....+..+.++|.+||+.||++|
T Consensus       175 PE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  254 (288)
T cd05583         175 PEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKR  254 (288)
T ss_pred             HHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhc
Confidence            99987755  78899999999999999999999964332    2222333322 22333457889999999999999999


Q ss_pred             CC---hHHHhcCCCcCCCChhhhhhccCCC
Q 014344          326 IG---VEEIKGHEFFKGVNWELLLKISRPP  352 (426)
Q Consensus       326 ~s---~~eil~hp~f~~~~~~~~~~~~~~~  352 (426)
                      ||   +.++|+||||+.++|+.+.....++
T Consensus       255 ~t~~~~~~~l~~~~~~~~~~~~~~~~~~~~  284 (288)
T cd05583         255 LGANGADEIKNHPFFQGIDWDDLAAKRIPA  284 (288)
T ss_pred             cCcchHHHHhcCcccccCCHHHHhhhccCC
Confidence            98   5678999999999998886544443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.6e-43  Score=334.21  Aligned_cols=256  Identities=23%  Similarity=0.349  Sum_probs=211.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEc----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDV----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      |++++|++.+.||+|+||+||+|...    .++..+|+|.+....            .......+.+|+.+++.++||||
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~------------~~~~~~~~~~E~~~l~~l~h~ni   69 (283)
T cd05090           2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN------------NPQQWGEFQQEASLMAELHHPNI   69 (283)
T ss_pred             CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC------------CHHHHHHHHHHHHHHhhCCCCCe
Confidence            67789999999999999999999853    456789999884321            12234678889999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhc---------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRD  153 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~---------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrD  153 (426)
                      +++++++......|+||||+++++|.+++....               ...+++..+..++.||+.||+|||++||+|||
T Consensus        70 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d  149 (283)
T cd05090          70 VCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKD  149 (283)
T ss_pred             eeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhc
Confidence            999999999999999999999999999875332               12478889999999999999999999999999


Q ss_pred             CCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 014344          154 LKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS  233 (426)
Q Consensus       154 lKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (426)
                      |||+|||++.++.+||+|||+++.......                                                  
T Consensus       150 lkp~nili~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------------  179 (283)
T cd05090         150 LAARNILIGEQLHVKISDLGLSREIYSADY--------------------------------------------------  179 (283)
T ss_pred             cccceEEEcCCCcEEeccccccccccCCcc--------------------------------------------------
Confidence            999999999999999999999986532110                                                  


Q ss_pred             CCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHH
Q 014344          234 DSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPL  310 (426)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~  310 (426)
                          ........++..|+|||.+.+..++.++|+|||||++|||++ |..||.+.+.......+....  +.....+..+
T Consensus       180 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (283)
T cd05090         180 ----YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRM  255 (283)
T ss_pred             ----eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHH
Confidence                001122346778999999998889999999999999999998 999998877665555444322  2233557889


Q ss_pred             HHHHHHHhccCCCCCCChHHHhcC
Q 014344          311 RNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       311 ~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .++|.+||+.||.+||++.+|+++
T Consensus       256 ~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         256 YSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHcccCcccCcCHHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4.6e-44  Score=341.23  Aligned_cols=252  Identities=25%  Similarity=0.429  Sum_probs=212.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|.....||.|+||.||++.+..+++.||||++....             ......+..|+.+++.++||||+++++.+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~ii~~~~~~   88 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-------------QQRRELLFNEVVIMRDYHHENVVDMYNSY   88 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-------------HHHHHHHHHHHHHHHhCCCCcHHHHHHhe
Confidence            44666788999999999999999999999999884322             12345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ...+..|+||||+++++|.+++..   +.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++
T Consensus        89 ~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~  165 (292)
T cd06658          89 LVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFC  165 (292)
T ss_pred             ecCCeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcch
Confidence            999999999999999999988753   34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        ......+|++.|+|||.
T Consensus       166 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  189 (292)
T cd06658         166 AQVSKEV--------------------------------------------------------PKRKSLVGTPYWMAPEV  189 (292)
T ss_pred             hhccccc--------------------------------------------------------ccCceeecCccccCHHH
Confidence            6542111                                                        01123468999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-C---CCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-P---DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~---~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..++.++|+|||||++|||++|..||...+....+..+.... +   .....+..+.++|.+||..||++|||++++
T Consensus       190 ~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~i  269 (292)
T cd06658         190 ISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQEL  269 (292)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHH
Confidence            998889999999999999999999999999877766555443221 1   122346789999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      ++||||..
T Consensus       270 l~~~~~~~  277 (292)
T cd06658         270 LQHPFLKL  277 (292)
T ss_pred             hhChhhhc
Confidence            99999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8e-44  Score=363.23  Aligned_cols=271  Identities=23%  Similarity=0.308  Sum_probs=201.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCC-CceEEEEEeeh---------hhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVES-SESFALKVIWR---------DLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~-~~~vAiK~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      .++|++++.||+|+||+||+|..+.. +...+.|.+..         ..+.+.     ..........+.+|+.+|+.++
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~~~~~~~~~~~~Ei~il~~l~  221 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKR-----VKAGSRAAIQLENEILALGRLN  221 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHH-----hhcchHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999986543 33333332110         001111     0112234557888999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI  161 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~---~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl  161 (426)
                      ||||+++++++...+..|+|++++. ++|..++....   ........++.++.||+.||+|||++|||||||||+|||+
T Consensus       222 HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl  300 (501)
T PHA03210        222 HENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL  300 (501)
T ss_pred             CCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            9999999999999999999999995 67777654321   1224467788999999999999999999999999999999


Q ss_pred             ccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          162 QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       162 ~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                      +.+|.+||+|||++..+....                                                       ....
T Consensus       301 ~~~~~vkL~DFGla~~~~~~~-------------------------------------------------------~~~~  325 (501)
T PHA03210        301 NCDGKIVLGDFGTAMPFEKER-------------------------------------------------------EAFD  325 (501)
T ss_pred             CCCCCEEEEeCCCceecCccc-------------------------------------------------------cccc
Confidence            999999999999997653211                                                       0112


Q ss_pred             cccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCC-CCCC--CHHHHHHHHhcCC----C-------------
Q 014344          242 NSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGS--SRKETFYRILCRP----P-------------  301 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~p-f~~~--~~~~~~~~i~~~~----~-------------  301 (426)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|..+ |...  .....+.+++...    .             
T Consensus       326 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i  405 (501)
T PHA03210        326 YGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYI  405 (501)
T ss_pred             ccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHh
Confidence            345799999999999999999999999999999999998754 4332  2222222221100    0             


Q ss_pred             ----------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhhhh
Q 014344          302 ----------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLL  346 (426)
Q Consensus       302 ----------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~~~  346 (426)
                                      .....+..+.++|.+||++||.+|||+.|+|.||||+....+...
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~~~~  466 (501)
T PHA03210        406 DSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEEEIL  466 (501)
T ss_pred             hhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCchHHH
Confidence                            001234567888999999999999999999999999987666543

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.6e-43  Score=332.76  Aligned_cols=254  Identities=31%  Similarity=0.490  Sum_probs=208.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||.|++|.||+|.+..+++.+|+|++....            .......+.+|+++++.++||||++++++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   68 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP------------NPDLQKQILRELEINKSCKSPYIVKYYGAF   68 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC------------chHHHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence            46999999999999999999999999999999985431            112346788899999999999999999988


Q ss_pred             ec--CCeEEEEEeccCCCChHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           96 ST--DKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        96 ~~--~~~~~lV~Ey~~gg~L~~l~~~--~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ..  ...+|+||||++|++|.+++..  .....+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|
T Consensus        69 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~d  148 (287)
T cd06621          69 LDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCD  148 (287)
T ss_pred             EccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEee
Confidence            54  4478999999999999987653  2335589999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                          .....++..|+
T Consensus       149 fg~~~~~~~~~----------------------------------------------------------~~~~~~~~~y~  170 (287)
T cd06621         149 FGVSGELVNSL----------------------------------------------------------AGTFTGTSFYM  170 (287)
T ss_pred             ccccccccccc----------------------------------------------------------cccccCCcccc
Confidence            99986542110                                                          11234778899


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhc-CCCCCC-------CCCHHHHHHHHHHh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS-----RKETFYRILC-RPPDLV-------GEPTPLRNLIRRLL  318 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-----~~~~~~~i~~-~~~~~~-------~~~~~~~~li~~~L  318 (426)
                      |||.+.+..++.++|+|||||++|+|++|..||....     ..+....+.. ..+...       ..+..+.+||.+||
T Consensus       171 ~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  250 (287)
T cd06621         171 APERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCL  250 (287)
T ss_pred             CHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998662     2333333332 111111       22467899999999


Q ss_pred             ccCCCCCCChHHHhcCCCcCC
Q 014344          319 EKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       319 ~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ..+|++|||+.|++.||||+.
T Consensus       251 ~~~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         251 EKDPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             CCCcccCCCHHHHHhCccccc
Confidence            999999999999999999964

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.2e-43  Score=328.22  Aligned_cols=254  Identities=27%  Similarity=0.456  Sum_probs=213.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|+..+.||+|++|+||+|.+..+++.||+|++.......        ......+.+..|+.+++.++||||+++++++.
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~--------~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~   72 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQ--------TGQEAVKQLEQEIALLSKLQHPNIVQYLGTER   72 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccc--------cchHHHHHHHHHHHHHHhcCCCCchheeeeEe
Confidence            4788899999999999999998899999999985432110        11234567888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+..+|++|||++|++|.+++....  .+++..+..++.||+.||+|||+.||+||||+|+||+++.++.+||+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~  150 (258)
T cd06632          73 EEDNLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAK  150 (258)
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccce
Confidence            9999999999999999999987643  48899999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                         ......|++.|+|||.+
T Consensus       151 ~~~~~~---------------------------------------------------------~~~~~~~~~~y~~pe~~  173 (258)
T cd06632         151 QVVEFS---------------------------------------------------------FAKSFKGSPYWMAPEVI  173 (258)
T ss_pred             eccccc---------------------------------------------------------cccccCCCcceeCHHHh
Confidence            653211                                                         11234588999999999


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          257 EGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       257 ~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      .... ++.++|+|||||++|+|++|+.||...........+..   .+......+..+.+||.+||+.+|.+||++.+++
T Consensus       174 ~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l  253 (258)
T cd06632         174 AQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELL  253 (258)
T ss_pred             cCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence            8776 89999999999999999999999987765555444433   1122234568899999999999999999999999


Q ss_pred             cCCCc
Q 014344          333 GHEFF  337 (426)
Q Consensus       333 ~hp~f  337 (426)
                      .|||+
T Consensus       254 ~~~~~  258 (258)
T cd06632         254 EHPFV  258 (258)
T ss_pred             cCCCC
Confidence            99996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3.7e-43  Score=328.18  Aligned_cols=249  Identities=22%  Similarity=0.269  Sum_probs=207.8

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      +.++|++++.||+|+||.||+|..+. +..+|+|.+.....              ....+..|+.+|+.++||||+++++
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~   66 (256)
T cd05114           2 NPSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAM--------------SEEDFIEEAKVMMKLSHPKLVQLYG   66 (256)
T ss_pred             CHHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCc--------------cHHHHHHHHHHHHHCCCCCceeEEE
Confidence            56789999999999999999998754 56799998743211              1245778999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.....+|+||||++||+|.+++.... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||
T Consensus        67 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g  145 (256)
T cd05114          67 VCTQQKPLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFG  145 (256)
T ss_pred             EEccCCCEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCC
Confidence            9999999999999999999999876543 348999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++........                                                       .......++..|+||
T Consensus       146 ~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~aP  170 (256)
T cd05114         146 MTRYVLDDEY-------------------------------------------------------TSSSGAKFPVKWSPP  170 (256)
T ss_pred             CccccCCCce-------------------------------------------------------eccCCCCCchhhCCh
Confidence            8875431100                                                       001112356689999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |++.+..++.++|+|||||++|+|++ |+.||...+..+....+....  ......+..+.++|.+||..+|.+||++++
T Consensus       171 E~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~  250 (256)
T cd05114         171 EVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAE  250 (256)
T ss_pred             hhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHH
Confidence            99998899999999999999999999 999999888877777765432  222334678999999999999999999999


Q ss_pred             Hhc
Q 014344          331 IKG  333 (426)
Q Consensus       331 il~  333 (426)
                      +++
T Consensus       251 l~~  253 (256)
T cd05114         251 LLR  253 (256)
T ss_pred             HHH
Confidence            975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=3.7e-43  Score=331.81  Aligned_cols=274  Identities=34%  Similarity=0.586  Sum_probs=223.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~   94 (426)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.+..+...          .....+..|+.+++++. ||||++++++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~----------~~~~~~~~e~~~~~~l~~~~~i~~~~~~   70 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKE----------KKVKYVKIEKEVLTRLNGHPGIIKLYYT   70 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccch----------HHHHHHHHHHHHHHhcccCCCchhHHHH
Confidence            479999999999999999999999999999999966433211          23456788999999998 9999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +..++..++||||+.+++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.+|.++|+|||+
T Consensus        71 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~  148 (280)
T cd05581          71 FQDEENLYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGT  148 (280)
T ss_pred             hcCCceEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCcc
Confidence            999999999999999999999887653  599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +...............                  .+                  ...............+.|+..|+|||
T Consensus       149 ~~~~~~~~~~~~~~~~------------------~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Pe  192 (280)
T cd05581         149 AKVLDPNSSPESNKGD------------------AT------------------NIDSQIEKNRRRFASFVGTAEYVSPE  192 (280)
T ss_pred             ccccCCccccccCCCC------------------Cc------------------cccccccccccccccccCCccccCHH
Confidence            8876432211000000                  00                  00000111223445667899999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCCCCHHHHHHHHHHhccCCCCCCCh----H
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PDLVGEPTPLRNLIRRLLEKDPTKRIGV----E  329 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~s~----~  329 (426)
                      ++.+..++.++|+|||||++|++++|+.||...+....+..+.... ......+..+.+||.+||+.+|.+||++    +
T Consensus       193 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  272 (280)
T cd05581         193 LLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYD  272 (280)
T ss_pred             HhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHH
Confidence            9998889999999999999999999999999888766666655322 2233457889999999999999999999    9


Q ss_pred             HHhcCCCc
Q 014344          330 EIKGHEFF  337 (426)
Q Consensus       330 eil~hp~f  337 (426)
                      ++++||||
T Consensus       273 ~ll~~~~~  280 (280)
T cd05581         273 ELKAHPFF  280 (280)
T ss_pred             HHhcCCCC
Confidence            99999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.4e-43  Score=331.20  Aligned_cols=262  Identities=23%  Similarity=0.428  Sum_probs=212.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|.+.+.||.|+||.||+|.+..+++.+|+|.+.........   .........+.+..|+.+++.++|||++++++++.
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   78 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGR---HDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET   78 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcc---cchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec
Confidence            488999999999999999999999999999988532211110   00001123456788999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ....+++||||++|++|.+++...  ..+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||++.
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~  156 (272)
T cd06629          79 TEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISK  156 (272)
T ss_pred             cCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence            999999999999999999988765  358999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .......                                                      ........|+..|+|||++
T Consensus       157 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~~PE~~  182 (272)
T cd06629         157 KSDDIYD------------------------------------------------------NDQNMSMQGSVFWMAPEVI  182 (272)
T ss_pred             ccccccc------------------------------------------------------ccccccccCCccccCHHHh
Confidence            5421100                                                      0112234588999999998


Q ss_pred             cCCC--CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--C-----CCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          257 EGKG--HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--P-----DLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       257 ~~~~--~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~-----~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ....  ++.++|+|||||++|+|++|..||......+....+....  .     .....+..+.++|.+||..+|.+||+
T Consensus       183 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  262 (272)
T cd06629         183 HSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT  262 (272)
T ss_pred             ccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCC
Confidence            8754  7899999999999999999999998766655444432111  1     11234788999999999999999999


Q ss_pred             hHHHhcCCCc
Q 014344          328 VEEIKGHEFF  337 (426)
Q Consensus       328 ~~eil~hp~f  337 (426)
                      ++++++||||
T Consensus       263 ~~~il~~~~~  272 (272)
T cd06629         263 ARELLQHPFI  272 (272)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=9.2e-44  Score=333.54  Aligned_cols=253  Identities=29%  Similarity=0.472  Sum_probs=214.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|.+.....            ......+.+|+.+++.++||||+++++++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   68 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN------------EAIQKQILRELDILHKCNSPYIVGFYGAF   68 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC------------hHHHHHHHHHHHHHHHCCCCchhhhheee
Confidence            368899999999999999999999999999999854321            12345778899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      ..+..+|+++||+.+++|.+++.... ..+++..+..++.|++.||+|||+ .|++||||||+||+++.++.++|+|||.
T Consensus        69 ~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~  147 (265)
T cd06605          69 YNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGV  147 (265)
T ss_pred             ecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence            99999999999999999999987653 569999999999999999999999 9999999999999999999999999998


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                          .....|+..|+|||
T Consensus       148 ~~~~~~~~----------------------------------------------------------~~~~~~~~~y~~PE  169 (265)
T cd06605         148 SGQLVNSL----------------------------------------------------------AKTFVGTSSYMAPE  169 (265)
T ss_pred             chhhHHHH----------------------------------------------------------hhcccCChhccCHH
Confidence            86542110                                                          01145888999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCC-CCCC-C-CCHHHHHHHHHHhccCCCCCC
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS-----SRKETFYRILCRP-PDLV-G-EPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~-~~~~-~-~~~~~~~li~~~L~~dP~~R~  326 (426)
                      .+.+..++.++|+|||||++|+|++|..||...     ...+....+.... +... . .+..+.++|.+||..||.+||
T Consensus       170 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  249 (265)
T cd06605         170 RIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERP  249 (265)
T ss_pred             HHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCc
Confidence            999999999999999999999999999999765     2333334443322 2221 2 577899999999999999999


Q ss_pred             ChHHHhcCCCcCC
Q 014344          327 GVEEIKGHEFFKG  339 (426)
Q Consensus       327 s~~eil~hp~f~~  339 (426)
                      |+.+++.||||+.
T Consensus       250 t~~~ll~~~~~~~  262 (265)
T cd06605         250 SYKELLEHPFIKK  262 (265)
T ss_pred             CHHHHhhCchhhc
Confidence            9999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=8.5e-44  Score=344.98  Aligned_cols=258  Identities=21%  Similarity=0.310  Sum_probs=204.7

Q ss_pred             eeeccc--CceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCC
Q 014344           22 SALGRG--AKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        22 ~~LG~G--~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      ..||+|  +||+||+|++..+++.||+|++.....           .....+.+.+|+.+++.++||||++++++|..+.
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~   72 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-----------TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS   72 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-----------CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC
Confidence            456766  999999999999999999999853321           1223567888999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCC
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                      .+|+||||+.+++|.+++.......+++..++.++.||+.||+|||+.||+||||||+|||++.++.++++||+.+....
T Consensus        73 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~  152 (328)
T cd08226          73 WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLV  152 (328)
T ss_pred             ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence            99999999999999999877655569999999999999999999999999999999999999999999999998654332


Q ss_pred             CCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCC
Q 014344          180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK  259 (426)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  259 (426)
                      ........                                                 .........++..|+|||++.+.
T Consensus       153 ~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~  183 (328)
T cd08226         153 RNGQKAKV-------------------------------------------------VYDFPQFSTSVLPWLSPELLRQD  183 (328)
T ss_pred             ccCccccc-------------------------------------------------cccccccccCccCccChhhhcCC
Confidence            11000000                                                 00000112356679999999764


Q ss_pred             --CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----------------------------------
Q 014344          260 --GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----------------------------------  302 (426)
Q Consensus       260 --~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----------------------------------  302 (426)
                        .++.++||||+||++|+|++|+.||...........++..++.                                   
T Consensus       184 ~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (328)
T cd08226         184 LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGM  263 (328)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccc
Confidence              4789999999999999999999999887665554443322110                                   


Q ss_pred             -------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 -------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 -------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                   ....+..+.+||++||+.||++|||++|+|+||||+.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         264 TQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             ccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence                         1123456899999999999999999999999999964

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.2e-43  Score=339.16  Aligned_cols=252  Identities=25%  Similarity=0.447  Sum_probs=213.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ..|.....||+|+||.||+|.+..+++.||+|++....             ......+.+|+.+++.++||||+++++.+
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~-------------~~~~~~~~~e~~~l~~l~hp~i~~~~~~~   87 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK-------------QQRRELLFNEVVIMRDYQHQNVVEMYKSY   87 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc-------------cchHHHHHHHHHHHHhCCCCchhhhhhhe
Confidence            44666778999999999999999999999999984321             11234577899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+...|+||||+++++|..++..   ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++
T Consensus        88 ~~~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~  164 (297)
T cd06659          88 LVGEELWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFC  164 (297)
T ss_pred             eeCCeEEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhH
Confidence            999999999999999999987654   34899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                        ......+|++.|+|||+
T Consensus       165 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  188 (297)
T cd06659         165 AQISKDV--------------------------------------------------------PKRKSLVGTPYWMAPEV  188 (297)
T ss_pred             hhccccc--------------------------------------------------------ccccceecCccccCHHH
Confidence            6543211                                                        11223468999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..++.++|+|||||++|+|++|+.||...+..+....+......    ....+..+.++|.+||+.+|.+||++.++
T Consensus       189 ~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~l  268 (297)
T cd06659         189 ISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQEL  268 (297)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence            99988999999999999999999999999887776666555433221    22346789999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      ++||||..
T Consensus       269 l~~~~~~~  276 (297)
T cd06659         269 LDHPFLLQ  276 (297)
T ss_pred             hhChhhcc
Confidence            99999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=4.2e-43  Score=332.10  Aligned_cols=248  Identities=25%  Similarity=0.396  Sum_probs=201.3

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLS   96 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~   96 (426)
                      |++++.||+|+||.||+|.+..+++.||+|++.+...           . ........|+.+++++. ||||+++++++.
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-----------~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   68 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-----------S-LEQVNNLREIQALRRLSPHPNILRLIEVLF   68 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-----------C-chhhhHHHHHHHHhhcCCCCCccceEEEEe
Confidence            7899999999999999999999999999999854311           0 11123346888888885 999999999998


Q ss_pred             cC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           97 TD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        97 ~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.  +.+++||||+. ++|.+++.... ..+++..++.++.||+.||.|||+.|++||||||+||+++. +.+||+|||+
T Consensus        69 ~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~  145 (282)
T cd07831          69 DRKTGRLALVFELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGS  145 (282)
T ss_pred             cCCCCcEEEEEecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccc
Confidence            87  89999999997 57777765533 45899999999999999999999999999999999999999 9999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +..+....                                                         ......+++.|+|||
T Consensus       146 ~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~aPE  168 (282)
T cd07831         146 CRGIYSKP---------------------------------------------------------PYTEYISTRWYRAPE  168 (282)
T ss_pred             ccccccCC---------------------------------------------------------CcCCCCCCcccCChh
Confidence            87653211                                                         111235788999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC---------------------------C
Q 014344          255 IIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD---------------------------L  303 (426)
Q Consensus       255 ~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~---------------------------~  303 (426)
                      .+.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+..   .+..                           .
T Consensus       169 ~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (282)
T cd07831         169 CLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLL  248 (282)
T ss_pred             HhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHc
Confidence            8654 4568899999999999999999999998876554443321   1000                           1


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ...+..+.+||.+||.++|++||++++++.||||
T Consensus       249 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         249 PNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            1346789999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.3e-43  Score=333.73  Aligned_cols=255  Identities=22%  Similarity=0.305  Sum_probs=211.8

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ++..+|.+++.||+|+||.||+|.+.     .+++.||+|++....            .......+.+|+++|+.++|||
T Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~e~~~l~~l~~~~   69 (280)
T cd05049           2 VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA------------SNDARKDFEREAELLTNFQHEN   69 (280)
T ss_pred             CChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC------------CHHHHHHHHHHHHHHHhcCCCC
Confidence            45678999999999999999999874     346789999984321            1123467888999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhc------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLK  155 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlK  155 (426)
                      |+++++++......|+||||++|++|.+++....            ...+++..+..++.||+.||.|||++|++|||||
T Consensus        70 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlk  149 (280)
T cd05049          70 IVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLA  149 (280)
T ss_pred             chheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccc
Confidence            9999999999999999999999999999987542            2347889999999999999999999999999999


Q ss_pred             CCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          156 PENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDS  235 (426)
Q Consensus       156 p~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (426)
                      |+|||++.++.++|+|||++........                                                    
T Consensus       150 p~nili~~~~~~kl~d~g~~~~~~~~~~----------------------------------------------------  177 (280)
T cd05049         150 TRNCLVGYDLVVKIGDFGMSRDVYTTDY----------------------------------------------------  177 (280)
T ss_pred             cceEEEcCCCeEEECCcccceecccCcc----------------------------------------------------
Confidence            9999999999999999999875421110                                                    


Q ss_pred             CCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHH
Q 014344          236 DSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPP--DLVGEPTPLRN  312 (426)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~  312 (426)
                        ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+.....  .....+..+.+
T Consensus       178 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (280)
T cd05049         178 --YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYD  255 (280)
T ss_pred             --eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHH
Confidence              001112246788999999999999999999999999999998 9999988887776666553322  22346788999


Q ss_pred             HHHHHhccCCCCCCChHHHhc
Q 014344          313 LIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       313 li~~~L~~dP~~R~s~~eil~  333 (426)
                      +|++||+.||++||++.|++.
T Consensus       256 li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         256 IMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HHHHHcCCCcccCCCHHHHHH
Confidence            999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=3.4e-43  Score=333.20  Aligned_cols=252  Identities=24%  Similarity=0.443  Sum_probs=207.6

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||.|++|.||+|++..+++.||||++.....            ......+..|+.++++++||||+++++.+.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   68 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE------------EGTPSTAIREISLMKELKHENIVRLHDVIH   68 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc------------ccchHHHHHHHHHHHhhcCCCEeeeeeeEe
Confidence            58999999999999999999999999999999854321            112345667999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~-~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+..++||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.||+||||||+||++++++.++|+|||++
T Consensus        69 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~  147 (284)
T cd07836          69 TENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLA  147 (284)
T ss_pred             eCCcEEEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchh
Confidence            9999999999998 48888766443 345899999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        ......++|+.|+|||+
T Consensus       148 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~PE~  171 (284)
T cd07836         148 RAFGIPV--------------------------------------------------------NTFSNEVVTLWYRAPDV  171 (284)
T ss_pred             hhhcCCc--------------------------------------------------------cccccccccccccChHH
Confidence            7542110                                                        01122357889999999


Q ss_pred             hcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C-----------CC----------------CC
Q 014344          256 IEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P-----------PD----------------LV  304 (426)
Q Consensus       256 ~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~-----------~~----------------~~  304 (426)
                      +.+. .++.++|+|||||++|+|++|..||.+.+..+.+.++...   +           +.                ..
T Consensus       172 ~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
T cd07836         172 LLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFP  251 (284)
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhh
Confidence            8764 5688999999999999999999999988766554443210   0           00                01


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ..+..+.++|.+||+.||.+||++.+++.||||
T Consensus       252 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         252 HADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             hcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            235678899999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.8e-43  Score=337.26  Aligned_cols=255  Identities=27%  Similarity=0.437  Sum_probs=214.3

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ...+|++++.||+|+||.||++.+..+++.||+|.+....             ......+..|+.+++.++||||+++++
T Consensus        17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-------------~~~~~~~~~e~~~l~~l~hp~i~~~~~   83 (293)
T cd06647          17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-------------QPKKELIINEILVMRENKHPNIVNYLD   83 (293)
T ss_pred             chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-------------chHHHHHHHHHHHHhhcCCCCeeehhh
Confidence            3578999999999999999999999999999999984321             122456788999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++......|+|+||+++++|.+++...   .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||
T Consensus        84 ~~~~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg  160 (293)
T cd06647          84 SYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG  160 (293)
T ss_pred             eeeeCCcEEEEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCc
Confidence            999999999999999999999987643   38899999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        .......|++.|+||
T Consensus       161 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~P  184 (293)
T cd06647         161 FCAQITPEQ--------------------------------------------------------SKRSTMVGTPYWMAP  184 (293)
T ss_pred             ceecccccc--------------------------------------------------------cccccccCChhhcCc
Confidence            887553211                                                        111234588999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCC---CCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PDL---VGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~---~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      |.+.+..++.++|+|||||++|+|++|+.||...+.......+.... +..   ...+..+.++|++||..+|++||+++
T Consensus       185 E~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~  264 (293)
T cd06647         185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAK  264 (293)
T ss_pred             hhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHH
Confidence            99998889999999999999999999999998876655443332211 111   12356799999999999999999999


Q ss_pred             HHhcCCCcCCC
Q 014344          330 EIKGHEFFKGV  340 (426)
Q Consensus       330 eil~hp~f~~~  340 (426)
                      +++.||||+..
T Consensus       265 ~il~h~~~~~~  275 (293)
T cd06647         265 ELLQHPFLKIA  275 (293)
T ss_pred             HHhcCHHHhcC
Confidence            99999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.4e-43  Score=342.89  Aligned_cols=252  Identities=28%  Similarity=0.442  Sum_probs=207.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||.||+|.+..+++.||||++.+...           .......+..|+.+|+.++||||++++++
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   82 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-----------SELFAKRAYRELRLLKHMKHENVIGLLDV   82 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-----------chHHHHHHHHHHHHHHhcCCCCccceeee
Confidence            4569999999999999999999999999999999854211           11234567789999999999999999999


Q ss_pred             eecCC------eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTDK------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~~------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +..+.      .+++||||+ |++|..++..   ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~k  158 (343)
T cd07880          83 FTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELK  158 (343)
T ss_pred             ecCCccccccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence            97654      458999999 7899887653   3499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++......                                                           .....+++
T Consensus       159 l~dfg~~~~~~~~-----------------------------------------------------------~~~~~~~~  179 (343)
T cd07880         159 ILDFGLARQTDSE-----------------------------------------------------------MTGYVVTR  179 (343)
T ss_pred             EeecccccccccC-----------------------------------------------------------ccccccCC
Confidence            9999998754211                                                           11234788


Q ss_pred             CCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------------------------
Q 014344          249 EYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--------------------------  301 (426)
Q Consensus       249 ~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--------------------------  301 (426)
                      .|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+....+..+.....                          
T Consensus       180 ~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (343)
T cd07880         180 WYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFR  259 (343)
T ss_pred             cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccC
Confidence            9999999876 4578999999999999999999999988766544443321110                          


Q ss_pred             ------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 ------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 ------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                            .....+..+.++|.+||..||++|||+.+++.||||+..
T Consensus       260 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         260 KKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             cchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence                  012346678999999999999999999999999999753

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=2.3e-43  Score=338.17  Aligned_cols=255  Identities=22%  Similarity=0.321  Sum_probs=210.0

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCce--EEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSES--FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~--vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~   87 (426)
                      +.+++++|++.+.||+|+||.||+|.+..++..  +|+|.+...            ........+.+|+.++.++ +|||
T Consensus         2 ~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~------------~~~~~~~~~~~Ei~~l~~l~~h~~   69 (303)
T cd05088           2 PVLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY------------ASKDDHRDFAGELEVLCKLGHHPN   69 (303)
T ss_pred             CccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc------------CCHHHHHHHHHHHHHHHHhcCCCC
Confidence            457889999999999999999999999877764  567665321            1112345778899999999 8999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRD  153 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrD  153 (426)
                      |+++++++..++.+|+||||+++++|.+++....              ...+++..++.++.||+.||+|||++||+|||
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~d  149 (303)
T cd05088          70 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD  149 (303)
T ss_pred             cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            9999999999999999999999999999886542              13588999999999999999999999999999


Q ss_pred             CCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 014344          154 LKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS  233 (426)
Q Consensus       154 lKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (426)
                      |||+|||++.++.+||+|||++.......                                                   
T Consensus       150 lkp~Nili~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------  178 (303)
T cd05088         150 LAARNILVGENYVAKIADFGLSRGQEVYV---------------------------------------------------  178 (303)
T ss_pred             cchheEEecCCCcEEeCccccCcccchhh---------------------------------------------------
Confidence            99999999999999999999875321000                                                   


Q ss_pred             CCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHH
Q 014344          234 DSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPL  310 (426)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~  310 (426)
                            ......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+.+..+...  .......+..+
T Consensus       179 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (303)
T cd05088         179 ------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEV  252 (303)
T ss_pred             ------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHH
Confidence                  0111124667999999988889999999999999999998 99999888777666555432  12233457889


Q ss_pred             HHHHHHHhccCCCCCCChHHHhcC
Q 014344          311 RNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       311 ~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+||.+||..+|++||++++++.+
T Consensus       253 ~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         253 YDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=4.8e-43  Score=367.65  Aligned_cols=270  Identities=26%  Similarity=0.368  Sum_probs=208.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|+++++||+|+||.||+|++..+++.||||++.....          ......+++.+|+++++.++||||++++++
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~----------~~e~~~~rflrEi~ILs~L~HPNIVkl~~v   70 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS----------ENPLLKKRFLREAKIAADLIHPGIVPVYSI   70 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc----------cCHHHHHHHHHHHHHHHhCCCcCcCeEEEE
Confidence            4679999999999999999999999999999999854321          112235678889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQS---------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~---------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      +.+.+..|+||||++|++|.+++....         ...++...+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus        71 ~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg  150 (932)
T PRK13184         71 CSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFG  150 (932)
T ss_pred             EeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCC
Confidence            999999999999999999999876421         12345667888999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .++|+|||++...............                                      ................+
T Consensus       151 ~vKLiDFGLAk~i~~~~~~~~~l~~--------------------------------------~~~~s~~s~~t~~g~~v  192 (932)
T PRK13184        151 EVVILDWGAAIFKKLEEEDLLDIDV--------------------------------------DERNICYSSMTIPGKIV  192 (932)
T ss_pred             CEEEEecCcceeccccccccccccc--------------------------------------ccccccccccccCCCCC
Confidence            9999999999876321100000000                                      00000001112233567


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HhcCCCC---CCCCCHHHHHHHHHHhccC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR-ILCRPPD---LVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~-i~~~~~~---~~~~~~~~~~li~~~L~~d  321 (426)
                      ||+.|||||++.+..++.++|||||||++|||++|+.||........... ....+..   ....++.+.+++.+||..|
T Consensus       193 GT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~D  272 (932)
T PRK13184        193 GTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVD  272 (932)
T ss_pred             CCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCC
Confidence            99999999999999999999999999999999999999987665443322 2222211   2355788999999999999


Q ss_pred             CCCCCChHHHh
Q 014344          322 PTKRIGVEEIK  332 (426)
Q Consensus       322 P~~R~s~~eil  332 (426)
                      |++|++..+.+
T Consensus       273 P~kR~ss~eeL  283 (932)
T PRK13184        273 PAERYSSVQEL  283 (932)
T ss_pred             hhhCcCHHHHH
Confidence            99998754444

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=4.1e-44  Score=338.66  Aligned_cols=254  Identities=27%  Similarity=0.438  Sum_probs=213.3

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++++.||+|+||.||+|.+..+++.||+|++.....            ......+..|+.+++.++||||+++++++.
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA------------EDEIEDIQQEITVLSQCDSPYITRYYGSYL   72 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc------------hHHHHHHHHHHHHHHcCCCCccHhhhcccc
Confidence            47888999999999999999999999999998843211            123457888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+...|+||||+++++|.+++..   ..+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~  149 (277)
T cd06642          73 KGTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAG  149 (277)
T ss_pred             cCCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccc
Confidence            99999999999999999988753   358999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+....                                                        .......|+..|+|||.+
T Consensus       150 ~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~~  173 (277)
T cd06642         150 QLTDTQ--------------------------------------------------------IKRNTFVGTPFWMAPEVI  173 (277)
T ss_pred             cccCcc--------------------------------------------------------hhhhcccCcccccCHHHh
Confidence            653211                                                        011223578899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCC-CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PDL-VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~-~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+..++.++|+|||||++|+|++|+.||...........+.... +.. ...+..+.++|.+||..+|++||++.++++|
T Consensus       174 ~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         174 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             CcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            99999999999999999999999999998766555444433221 211 2346789999999999999999999999999


Q ss_pred             CCcCCCC
Q 014344          335 EFFKGVN  341 (426)
Q Consensus       335 p~f~~~~  341 (426)
                      |||....
T Consensus       254 ~~~~~~~  260 (277)
T cd06642         254 KFITRYT  260 (277)
T ss_pred             HHHHHHh
Confidence            9997543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=6.9e-43  Score=331.91  Aligned_cols=252  Identities=24%  Similarity=0.438  Sum_probs=213.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ..|.-.+.||.|++|.||++.+..+++.+|+|++....             ....+.+.+|+.+++.++||||+++++++
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-------------~~~~~~~~~e~~~l~~~~h~~vv~~~~~~   85 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-------------QQRRELLFNEVVIMRDYQHPNIVEMYSSY   85 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-------------hhHHHHHHHHHHHHHHcCCCChheEEEEE
Confidence            35667789999999999999999999999999874321             11234577899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ......|+++||+.|++|.+++..   ..++...+..++.|++.||+|||++||+||||+|+||+++.++.++|+|||++
T Consensus        86 ~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~  162 (285)
T cd06648          86 LVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFC  162 (285)
T ss_pred             EcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccc
Confidence            999999999999999999998765   34899999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        .......|++.|+|||.
T Consensus       163 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  186 (285)
T cd06648         163 AQVSKEV--------------------------------------------------------PRRKSLVGTPYWMAPEV  186 (285)
T ss_pred             hhhccCC--------------------------------------------------------cccccccCCccccCHHH
Confidence            6542111                                                        01123458899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC----CCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL----VGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..++.++|+|||||++|+|++|+.||...+.......+....+..    ...+..+.+||++||..+|++||++.++
T Consensus       187 ~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i  266 (285)
T cd06648         187 ISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAEL  266 (285)
T ss_pred             hcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHH
Confidence            998889999999999999999999999998877766666555432222    1246789999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      +.||||+.
T Consensus       267 l~~~~~~~  274 (285)
T cd06648         267 LNHPFLAK  274 (285)
T ss_pred             ccCccccc
Confidence            99999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=6.5e-43  Score=330.44  Aligned_cols=257  Identities=21%  Similarity=0.247  Sum_probs=208.7

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      .+.-++|++.+.||+|+||+||+|.+..     ++..||+|++....            .......+.+|+.+++.++||
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~------------~~~~~~~~~~e~~~l~~l~~~   69 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA------------SMRERIEFLNEASVMKEFNCH   69 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC------------CHHHHHHHHHHHHHHHhCCCC
Confidence            3456789999999999999999998752     35679999874321            111234678899999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCC
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--------QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPEN  158 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~--------~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~N  158 (426)
                      ||+++++++......++||||+++++|.+++.....        ..++...+..++.|++.||.|||+.|++||||||+|
T Consensus        70 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~N  149 (277)
T cd05062          70 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARN  149 (277)
T ss_pred             CeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchhe
Confidence            999999999999999999999999999998865321        235678888999999999999999999999999999


Q ss_pred             eeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          159 IMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS  238 (426)
Q Consensus       159 iLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (426)
                      ||++.++.++|+|||++..+......                                                      
T Consensus       150 il~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------------  175 (277)
T cd05062         150 CMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------------------------  175 (277)
T ss_pred             EEEcCCCCEEECCCCCccccCCccee------------------------------------------------------
Confidence            99999999999999998765321100                                                      


Q ss_pred             CCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHH
Q 014344          239 EKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIR  315 (426)
Q Consensus       239 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~  315 (426)
                      .......+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+....  ......+..+.++|.
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  255 (277)
T cd05062         176 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMR  255 (277)
T ss_pred             ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence            00111246788999999999889999999999999999998 799999888776665554332  223345788999999


Q ss_pred             HHhccCCCCCCChHHHhcC
Q 014344          316 RLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       316 ~~L~~dP~~R~s~~eil~h  334 (426)
                      +||+.||++|||+.|++++
T Consensus       256 ~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         256 MCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HHcCCChhhCcCHHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-43  Score=337.72  Aligned_cols=257  Identities=27%  Similarity=0.392  Sum_probs=203.4

Q ss_pred             CcEEEeeecccCceEEEEEEEcC--CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVE--SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +|++++.||+|+||.||+|.+..  +++.||||++.....          ........+..|+.+++.++||||++++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   70 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE----------QYTGISQSACREIALLRELKHENVVSLVEV   70 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc----------cccCccHHHHHHHHHHHhcCCCCccceEEE
Confidence            48999999999999999999988  899999999855321          111233566779999999999999999999


Q ss_pred             eecC--CeEEEEEeccCCCChHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc----CC
Q 014344           95 LSTD--KFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE----NG  165 (426)
Q Consensus        95 ~~~~--~~~~lV~Ey~~gg~L~~l~~~~~---~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~----~g  165 (426)
                      +...  ..+|+||||+. ++|.+++....   ...+++..++.++.||+.||.|||++||+||||||+|||++.    ++
T Consensus        71 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~  149 (316)
T cd07842          71 FLEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERG  149 (316)
T ss_pred             EeCCCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccc
Confidence            9888  88999999997 46766654322   235899999999999999999999999999999999999999    89


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++..+.....                                                     ........+
T Consensus       150 ~~kl~Dfg~~~~~~~~~~-----------------------------------------------------~~~~~~~~~  176 (316)
T cd07842         150 VVKIGDLGLARLFNAPLK-----------------------------------------------------PLADLDPVV  176 (316)
T ss_pred             eEEECCCccccccCCCcc-----------------------------------------------------cccccCCcc
Confidence            999999999886532110                                                     001123346


Q ss_pred             cCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHH---h---------------
Q 014344          246 GTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE---------TFYRI---L---------------  297 (426)
Q Consensus       246 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---------~~~~i---~---------------  297 (426)
                      +|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.....         .+..+   +               
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  256 (316)
T cd07842         177 VTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMP  256 (316)
T ss_pred             ccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcc
Confidence            8899999998876 457899999999999999999999998654322         11110   0               


Q ss_pred             --------cCCCCCC------------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          298 --------CRPPDLV------------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       298 --------~~~~~~~------------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                              .......            ..+..+.++|.+||+.||++|||+.|++.||||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         257 EYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             cchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                    0000011            335678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-44  Score=300.53  Aligned_cols=254  Identities=26%  Similarity=0.443  Sum_probs=212.3

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|.-.++||+|.||+||+|+...+++.||+|.+..+.           +....-....+|+.+|+.|+|.|||+++++..
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-----------ddegvpssalreicllkelkhknivrl~dvlh   71 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-----------DDEGVPSSALREICLLKELKHKNIVRLHDVLH   71 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-----------CCCCCcHHHHHHHHHHHHhhhcceeehhhhhc
Confidence            4667789999999999999999999999999884432           12223456788999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .++.+-+|+|||. .+|..+..... +.+..+.++.++.|++.||.++|++++.||||||.|+||+.+|.+||+|||+++
T Consensus        72 sdkkltlvfe~cd-qdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglar  149 (292)
T KOG0662|consen   72 SDKKLTLVFEFCD-QDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLAR  149 (292)
T ss_pred             cCceeEEeHHHhh-HHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhh
Confidence            9999999999996 88888876554 559999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+....                          -|                              ...-+-|..|++|.++
T Consensus       150 afgipv--------------------------rc------------------------------ysaevvtlwyrppdvl  173 (292)
T KOG0662|consen  150 AFGIPV--------------------------RC------------------------------YSAEVVTLWYRPPDVL  173 (292)
T ss_pred             hcCCce--------------------------Ee------------------------------eeceeeeeeccCccee
Confidence            774211                          01                              1122578999999999


Q ss_pred             cCC-CCChhhHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCC-----CCCC------C------------------
Q 014344          257 EGK-GHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCRP-----PDLV------G------------------  305 (426)
Q Consensus       257 ~~~-~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~-----~~~~------~------------------  305 (426)
                      .|. -|+.+.|+||.|||+.|+. .|++.|++.+..+++.+|....     ..++      +                  
T Consensus       174 fgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp  253 (292)
T KOG0662|consen  174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVP  253 (292)
T ss_pred             eeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhh
Confidence            884 5899999999999999998 5999999999998888875211     0000      0                  


Q ss_pred             -CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          306 -EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       306 -~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                       ....-+||++++|.-+|..|++++++++||||.+
T Consensus       254 ~lns~grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  254 KLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             hhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence             0122579999999999999999999999999975

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=5.5e-43  Score=337.51  Aligned_cols=256  Identities=21%  Similarity=0.269  Sum_probs=208.0

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCce----EEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSES----FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~----vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      +.+...+|++++.||+|+||+||+|.+..+++.    ||+|++....            .....+++..|+.+++.++||
T Consensus         2 ~~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~e~~~l~~l~h~   69 (316)
T cd05108           2 RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT------------SPKANKEILDEAYVMASVDNP   69 (316)
T ss_pred             cccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC------------CHHHHHHHHHHHHHHHhCCCC
Confidence            457778999999999999999999998766664    8999874221            122345788899999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++... ..++++||+++|+|.+++.... ..++...+..++.||+.||+|||++||+||||||+|||++.++.
T Consensus        70 niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~  147 (316)
T cd05108          70 HVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH  147 (316)
T ss_pred             CCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCc
Confidence            999999998764 5689999999999999887643 34889999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||+++.+......                                                      .......+
T Consensus       148 ~kl~DfG~a~~~~~~~~~------------------------------------------------------~~~~~~~~  173 (316)
T cd05108         148 VKITDFGLAKLLGADEKE------------------------------------------------------YHAEGGKV  173 (316)
T ss_pred             EEEccccccccccCCCcc------------------------------------------------------eeccCCcc
Confidence            999999999866421100                                                      00111224


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh--cCCCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      +..|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+.  ...+.....+..+.++|.+||..+|.
T Consensus       174 ~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  253 (316)
T cd05108         174 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDAD  253 (316)
T ss_pred             ceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence            678999999999999999999999999999987 999998877655432222  12233345578899999999999999


Q ss_pred             CCCChHHHhcC
Q 014344          324 KRIGVEEIKGH  334 (426)
Q Consensus       324 ~R~s~~eil~h  334 (426)
                      +||++.+++.+
T Consensus       254 ~Rps~~~l~~~  264 (316)
T cd05108         254 SRPKFRELIIE  264 (316)
T ss_pred             hCcCHHHHHHH
Confidence            99999999976

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-43  Score=333.27  Aligned_cols=252  Identities=27%  Similarity=0.423  Sum_probs=207.5

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |++++.||.|++|.||+|.+..+|+.||+|++......           ......+..|+.+++.++|||++++++++.+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~   69 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-----------EGVPSTAIREISLLKELNHPNIVRLLDVVHS   69 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-----------ccchhHHHHHHHHHHhcCCCCccCHhheecc
Confidence            68899999999999999999999999999998543211           1123457779999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ....|++|||+. ++|.+++.......+++..+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||++..
T Consensus        70 ~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~  148 (283)
T cd07835          70 ENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARA  148 (283)
T ss_pred             CCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence            999999999995 7899888765544689999999999999999999999999999999999999999999999999865


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      +....                                                        .......+++.|+|||++.
T Consensus       149 ~~~~~--------------------------------------------------------~~~~~~~~~~~~~aPE~~~  172 (283)
T cd07835         149 FGVPV--------------------------------------------------------RTYTHEVVTLWYRAPEILL  172 (283)
T ss_pred             cCCCc--------------------------------------------------------cccCccccccCCCCCceee
Confidence            42110                                                        0011224688899999887


Q ss_pred             CC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C---------------------------CCCCCC
Q 014344          258 GK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P---------------------------PDLVGE  306 (426)
Q Consensus       258 ~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~---------------------------~~~~~~  306 (426)
                      +. .++.++|+|||||++|+|++|.+||.+.+......++...   +                           ......
T Consensus       173 ~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (283)
T cd07835         173 GSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNL  252 (283)
T ss_pred             cCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCC
Confidence            64 5788999999999999999999999887765444333210   0                           001234


Q ss_pred             CHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       307 ~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      +..+.++|.+||+.||.+|||+++++.||||
T Consensus       253 ~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         253 DEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            5778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=8.1e-43  Score=331.82  Aligned_cols=254  Identities=22%  Similarity=0.309  Sum_probs=210.9

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ++..+|.+.+.||+|+||+||++.+.     .++..+|+|.+....             ......+..|+.++++++|||
T Consensus         2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~   68 (288)
T cd05093           2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-------------DNARKDFHREAELLTNLQHEH   68 (288)
T ss_pred             CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-------------HHHHHHHHHHHHHHHhCCCCC
Confidence            45678999999999999999999863     345679999884321             123456888999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhc-----------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-----------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKP  156 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~-----------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp  156 (426)
                      |+++++++.....+++||||+++++|.+++....           ...+++..+..++.||+.||+|||++|++||||||
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp  148 (288)
T cd05093          69 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT  148 (288)
T ss_pred             cceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCc
Confidence            9999999999999999999999999999887543           12489999999999999999999999999999999


Q ss_pred             CCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          157 ENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD  236 (426)
Q Consensus       157 ~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (426)
                      +|||++.++.++|+|||++........                                                     
T Consensus       149 ~Nili~~~~~~kl~dfg~~~~~~~~~~-----------------------------------------------------  175 (288)
T cd05093         149 RNCLVGENLLVKIGDFGMSRDVYSTDY-----------------------------------------------------  175 (288)
T ss_pred             ceEEEccCCcEEeccCCccccccCCce-----------------------------------------------------
Confidence            999999999999999999875532110                                                     


Q ss_pred             CCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHH
Q 014344          237 SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNL  313 (426)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~l  313 (426)
                       ........+++.|+|||.+.+..++.++|+|||||++|+|++ |.+||......+....+.....  .....+..+.+|
T Consensus       176 -~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l  254 (288)
T cd05093         176 -YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDL  254 (288)
T ss_pred             -eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHH
Confidence             001122346788999999999999999999999999999998 9999998887776666654332  223457889999


Q ss_pred             HHHHhccCCCCCCChHHHhc
Q 014344          314 IRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+||+.||.+|||+.++++
T Consensus       255 i~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         255 MLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHHHccCChhhCCCHHHHHH
Confidence            99999999999999999964

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.4e-43  Score=344.30  Aligned_cols=259  Identities=28%  Similarity=0.432  Sum_probs=208.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++.....           .......+..|+.+|+.++||||++++++|
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   73 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-----------VPTLAKRTLRELKILRHFKHDNIIAIRDIL   73 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-----------cccchHHHHHHHHHHHhcCCCCccCHHHhc
Confidence            679999999999999999999999999999999854211           112345677899999999999999999988


Q ss_pred             e----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           96 S----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        96 ~----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      .    ....+|+||||+. ++|..++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|
T Consensus        74 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~d  150 (334)
T cd07855          74 RPPGADFKDVYVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGD  150 (334)
T ss_pred             cccCCCCceEEEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecc
Confidence            5    3457899999995 6888876543  3499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.........                                                    ........+|+..|+
T Consensus       151 fg~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~  178 (334)
T cd07855         151 FGMARGLSSSPTE----------------------------------------------------HKYFMTEYVATRWYR  178 (334)
T ss_pred             cccceeecccCcC----------------------------------------------------CCccccccccccccc
Confidence            9998765321100                                                    001122346899999


Q ss_pred             cchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--------------------------CCCC--
Q 014344          252 APEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--------------------------RPPD--  302 (426)
Q Consensus       252 aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~--------------------------~~~~--  302 (426)
                      |||.+.+ ..++.++|||||||++|+|++|++||.+.+.......+..                          ....  
T Consensus       179 ~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (334)
T cd07855         179 APELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVP  258 (334)
T ss_pred             ChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCC
Confidence            9999866 4588999999999999999999999987765433222110                          0000  


Q ss_pred             ----CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          303 ----LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       303 ----~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                          ....+..+.++|.+||+.+|.+||++.+++.||||++.
T Consensus       259 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~  300 (334)
T cd07855         259 WSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY  300 (334)
T ss_pred             HHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence                12347789999999999999999999999999999753

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=9.2e-43  Score=326.20  Aligned_cols=255  Identities=31%  Similarity=0.518  Sum_probs=216.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|++|.||+|.+..+++.||+|++.....            ......+..|+.++..++||||+++++++
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~------------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD------------EEFRKQLLRELKTLRSCESPYVVKCYGAF   68 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc------------hHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            469999999999999999999999999999999854321            12456788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      ..+..+++||||+++++|.+++...  ..+++..+..++.|++.||.|||+ .|++||||+|+||+++.++.++|+|||+
T Consensus        69 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~  146 (264)
T cd06623          69 YKEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGI  146 (264)
T ss_pred             ccCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCcc
Confidence            9999999999999999999998764  459999999999999999999999 9999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        .......++..|+|||
T Consensus       147 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~pE  170 (264)
T cd06623         147 SKVLENTL--------------------------------------------------------DQCNTFVGTVTYMSPE  170 (264)
T ss_pred             ceecccCC--------------------------------------------------------CcccceeecccccCHh
Confidence            87653211                                                        0112345888999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCC--CCCC-CCHHHHHHHHHHhccCCCCCCCh
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPP--DLVG-EPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~~~~--~~~~-~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      .+.+..++.++|+||||+++|+|++|..||....   ..+....+.....  .... .+..+.++|.+||..+|++||++
T Consensus       171 ~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~  250 (264)
T cd06623         171 RIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSA  250 (264)
T ss_pred             hhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCH
Confidence            9999889999999999999999999999998773   3444444443221  1223 57889999999999999999999


Q ss_pred             HHHhcCCCcCCC
Q 014344          329 EEIKGHEFFKGV  340 (426)
Q Consensus       329 ~eil~hp~f~~~  340 (426)
                      .+++.||||+..
T Consensus       251 ~~ll~~~~~~~~  262 (264)
T cd06623         251 AELLQHPFIKKA  262 (264)
T ss_pred             HHHHhCHHHHhc
Confidence            999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.3e-43  Score=337.12  Aligned_cols=261  Identities=27%  Similarity=0.381  Sum_probs=209.7

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~   92 (426)
                      ..++|+.++.||+|+||.||++.+..+++.||+|.+.+....            .....+..|+.++.++. ||||++++
T Consensus         2 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~e~~~l~~~~~~~~iv~~~   69 (288)
T cd06616           2 TAEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE------------KEQKRLLMDLDVVMRSSDCPYIVKFY   69 (288)
T ss_pred             cHHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh------------HHHHHHHHHHHHHHHhcCCCCEeeee
Confidence            356788899999999999999999999999999998543211            23456788999999996 99999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHH---HhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEE
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRK---QQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~---~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +++..+...+++|||+. ++|.++..   ......+++..+..++.|++.||+|||+ .||+||||||+|||++.++.++
T Consensus        70 ~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~k  148 (288)
T cd06616          70 GALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIK  148 (288)
T ss_pred             eEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEE
Confidence            99999999999999996 56655432   2233569999999999999999999997 4999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++..+....                                                         ......|++
T Consensus       149 l~dfg~~~~~~~~~---------------------------------------------------------~~~~~~~~~  171 (288)
T cd06616         149 LCDFGISGQLVDSI---------------------------------------------------------AKTRDAGCR  171 (288)
T ss_pred             EeecchhHHhccCC---------------------------------------------------------ccccccCcc
Confidence            99999987543110                                                         112224888


Q ss_pred             CCccchhhcCC---CCChhhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCC-CCC-----CCCCHHHHHHHHHHh
Q 014344          249 EYVAPEIIEGK---GHDFAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCRP-PDL-----VGEPTPLRNLIRRLL  318 (426)
Q Consensus       249 ~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~-~~~-----~~~~~~~~~li~~~L  318 (426)
                      .|+|||++.+.   .++.++||||+||++|+|++|+.||..... .+...++.... +..     ...+..+.+||.+||
T Consensus       172 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  251 (288)
T cd06616         172 PYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCL  251 (288)
T ss_pred             CccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHc
Confidence            99999999876   688999999999999999999999976542 22233332221 111     135678999999999


Q ss_pred             ccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          319 EKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       319 ~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                      +++|++|||+++|+.||||+...|..
T Consensus       252 ~~~p~~Rpt~~~i~~~~~~~~~~~~~  277 (288)
T cd06616         252 IKDESKRPKYKELLEHPFIKDYEERN  277 (288)
T ss_pred             cCChhhCcCHHHHhcChhhhchhhcc
Confidence            99999999999999999998755443

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=8e-43  Score=327.28  Aligned_cols=251  Identities=22%  Similarity=0.312  Sum_probs=207.7

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+..++|+++++||+|+||.||+|.+..+ ..||+|++.+...              ....+..|+.+++.++||||+++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~--------------~~~~~~~E~~~l~~l~~~~i~~~   66 (262)
T cd05071           2 EIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM--------------SPEAFLQEAQVMKKLRHEKLVQL   66 (262)
T ss_pred             CCChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc--------------CHHHHHHHHHHHHhCCCCCcceE
Confidence            34557799999999999999999998665 4599999853211              12457789999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++.+. +...|+||||+++++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|
T Consensus        67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~d  145 (262)
T cd05071          67 YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVAD  145 (262)
T ss_pred             EEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEecc
Confidence            99875 45689999999999999998765445689999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||.+..+.....                                                       .......++..|+
T Consensus       146 fg~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~  170 (262)
T cd05071         146 FGLARLIEDNEY-------------------------------------------------------TARQGAKFPIKWT  170 (262)
T ss_pred             CCceeecccccc-------------------------------------------------------ccccCCcccceec
Confidence            999876532110                                                       0011223677899


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||++.+..++.++|+|||||++|+|++ |..||.+....+....+...  .+.....+..+.+||.+||+.+|++||++
T Consensus       171 ~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~  250 (262)
T cd05071         171 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF  250 (262)
T ss_pred             CHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCH
Confidence            9999998889999999999999999999 89999988877776666433  22234567889999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      .++++
T Consensus       251 ~~~~~  255 (262)
T cd05071         251 EYLQA  255 (262)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=2.7e-43  Score=329.78  Aligned_cols=250  Identities=20%  Similarity=0.263  Sum_probs=213.5

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ...+|++++.||.|+||.||+|.+.. ++.+|+|++.....             .....+..|+.+++.++||||+++++
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~-------------~~~~~~~~e~~~l~~l~~~~i~~~~~   69 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL-------------LKQQDFQKEVQALKRLRHKHLISLFA   69 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch-------------hhHHHHHHHHHHHhcCCCcchhheee
Confidence            34579999999999999999999977 89999999854321             12346778999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++......++||||+++++|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        70 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g  149 (261)
T cd05148          70 VCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFG  149 (261)
T ss_pred             eEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEcccc
Confidence            99999999999999999999999887666678999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        .......++..|+||
T Consensus       150 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~~P  173 (261)
T cd05148         150 LARLIKEDV--------------------------------------------------------YLSSDKKIPYKWTAP  173 (261)
T ss_pred             chhhcCCcc--------------------------------------------------------ccccCCCCceEecCH
Confidence            987653211                                                        001122356789999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |.+.+..++.++|+|||||++|+|++ |+.||.+.+..+.+..+...  .+.....+..+.++|.+||+.||.+|||+.+
T Consensus       174 E~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~  253 (261)
T cd05148         174 EAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKA  253 (261)
T ss_pred             HHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            99998889999999999999999998 89999988877777766532  2334566888999999999999999999999


Q ss_pred             Hhc
Q 014344          331 IKG  333 (426)
Q Consensus       331 il~  333 (426)
                      |++
T Consensus       254 l~~  256 (261)
T cd05148         254 LRE  256 (261)
T ss_pred             HHH
Confidence            875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=7.6e-43  Score=327.83  Aligned_cols=254  Identities=26%  Similarity=0.375  Sum_probs=208.4

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++.+.||+|+||.||+|++..+++.||||.+.....          ........+..|+.+++.++||||++++++
T Consensus         1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   70 (267)
T cd08228           1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM----------MDAKARQDCVKEIDLLKQLNHPNVIKYLDS   70 (267)
T ss_pred             CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc----------CCHHHHHHHHHHHHHHHhCCCcceeeeeee
Confidence            3679999999999999999999999999999998743211          112234567889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +.+.+..++||||+++++|.+++...  ....+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+||
T Consensus        71 ~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~  150 (267)
T cd08228          71 FIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDL  150 (267)
T ss_pred             EEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECcc
Confidence            99999999999999999999887542  2345899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                        .......|++.|+|
T Consensus       151 g~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~a  174 (267)
T cd08228         151 GLGRFFSSKT--------------------------------------------------------TAAHSLVGTPYYMS  174 (267)
T ss_pred             ccceeccchh--------------------------------------------------------HHHhcCCCCccccC
Confidence            9987653211                                                        01123358889999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhc--CCCCC-CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR--KETFYRILC--RPPDL-VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~--~~~~~-~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||.+.+..++.++|+||+||++|+|++|+.||.....  ......+..  .++.. ...+..+.++|.+||..+|++||+
T Consensus       175 PE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~  254 (267)
T cd08228         175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPD  254 (267)
T ss_pred             hhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcC
Confidence            9999988899999999999999999999999975532  233333322  11111 235678999999999999999999


Q ss_pred             hHHHhcC
Q 014344          328 VEEIKGH  334 (426)
Q Consensus       328 ~~eil~h  334 (426)
                      +.++++.
T Consensus       255 ~~~vl~~  261 (267)
T cd08228         255 IGYVHQI  261 (267)
T ss_pred             HHHHHHH
Confidence            9999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.7e-43  Score=342.82  Aligned_cols=255  Identities=27%  Similarity=0.428  Sum_probs=206.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++++.||+|+||+||+|++..+++.||||.+.....           .......+..|+.+++.++||||+++++++
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~   73 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-----------NRIDAKRTLREIKLLRHLDHENVIAIKDIM   73 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-----------ccchhHHHHHHHHHHHhcCCCCccchHHhe
Confidence            469999999999999999999999999999998853211           112234567799999999999999999988


Q ss_pred             ecC-----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           96 STD-----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        96 ~~~-----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ...     ..+|+||||+. ++|.+++...  ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+
T Consensus        74 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~  150 (337)
T cd07858          74 PPPHREAFNDVYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC  150 (337)
T ss_pred             ecccccccCcEEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEC
Confidence            644     35899999995 7888877643  459999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++.......                                                        .......||..|
T Consensus       151 Dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y  174 (337)
T cd07858         151 DFGLARTTSEKG--------------------------------------------------------DFMTEYVVTRWY  174 (337)
T ss_pred             cCccccccCCCc--------------------------------------------------------ccccccccccCc
Confidence            999987653210                                                        112234578899


Q ss_pred             ccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cC-----------------------C---
Q 014344          251 VAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CR-----------------------P---  300 (426)
Q Consensus       251 ~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~-----------------------~---  300 (426)
                      +|||.+.+ ..++.++|+|||||++|+|++|++||.+.+....+..+.   ..                       .   
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (337)
T cd07858         175 RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQ  254 (337)
T ss_pred             cChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCccccc
Confidence            99998865 468899999999999999999999998765433222111   00                       0   


Q ss_pred             ---CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          301 ---PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       301 ---~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                         ......+..+.+||++||+.+|++|||++++++||||+.+
T Consensus       255 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         255 SFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             CHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence               0112456788999999999999999999999999999764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.3e-44  Score=325.41  Aligned_cols=261  Identities=26%  Similarity=0.418  Sum_probs=206.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCc----eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSE----SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+..|+++..||+|.||.||+|..+.++.    .||||.+..+.           +........-+|+.+++.+.||||+
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~k-----------d~tGiS~SAcREiaL~REl~h~nvi   90 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEK-----------DGTGISMSACREIALLRELKHPNVI   90 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccC-----------CCCCcCHHHHHHHHHHHHhcCCcch
Confidence            45679999999999999999996654432    68999873321           1223345677799999999999999


Q ss_pred             eeeeeeec-CCeEEEEEeccCCCChHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-
Q 014344           90 RLRGVLST-DKFVGYAIDYCPGRDLHSLRKQQ---SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-  164 (426)
Q Consensus        90 ~l~~~~~~-~~~~~lV~Ey~~gg~L~~l~~~~---~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-  164 (426)
                      .+..+|.. +..+++++||++ -||..+++.+   ..+.++...++.++.||+.|+.|||++=|+||||||.|||+..+ 
T Consensus        91 ~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg  169 (438)
T KOG0666|consen   91 SLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG  169 (438)
T ss_pred             hHHHHHhccCceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC
Confidence            99999977 899999999997 7888877643   23469999999999999999999999999999999999999987 


Q ss_pred             ---CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          165 ---GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       165 ---g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                         |.|||+|||+++.+......                                                     -...
T Consensus       170 perG~VKIaDlGlaR~~~~plkp-----------------------------------------------------l~s~  196 (438)
T KOG0666|consen  170 PERGRVKIADLGLARLFNNPLKP-----------------------------------------------------LASL  196 (438)
T ss_pred             CccCeeEeecccHHHHhhccccc-----------------------------------------------------cccC
Confidence               89999999999987532110                                                     0122


Q ss_pred             cccccCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHh---cCCC-----CC
Q 014344          242 NSFVGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---------ETFYRIL---CRPP-----DL  303 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---------~~~~~i~---~~~~-----~~  303 (426)
                      ...|-|..|+|||++.|. .|+.++||||+|||..||++-.+.|.+...+         .++.+|+   ..|.     .+
T Consensus       197 d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~l  276 (438)
T KOG0666|consen  197 DPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDL  276 (438)
T ss_pred             CceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhh
Confidence            345789999999999884 5899999999999999999999999765322         2333332   1111     00


Q ss_pred             C------------------------------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          304 V------------------------------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       304 ~------------------------------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      .                              ..++...+|+.+||++||-+|+|++++|+|+||..
T Consensus       277 kk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~  342 (438)
T KOG0666|consen  277 KKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTE  342 (438)
T ss_pred             hhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccccc
Confidence            0                              01233679999999999999999999999999975

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-45  Score=337.89  Aligned_cols=251  Identities=30%  Similarity=0.434  Sum_probs=208.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC--C----Cc
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH--P----LL   88 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--p----~i   88 (426)
                      .++|+|++.||+|.||.|-.+.|..++..||||++..-.              .......-|+++|.++.+  |    -+
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~--------------kYreAa~iEi~vLqki~~~DP~g~~rc  153 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD--------------KYREAALIEIEVLQKINESDPNGKFRC  153 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH--------------HHhhHHHHHHHHHHHHHhcCCCCceEE
Confidence            456999999999999999999999999999999983211              123345669999999942  2    46


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-----
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-----  163 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-----  163 (426)
                      +.+.++|.-.+..|+|+|.+ |.++++++..+...+|+...++.+++|++.++++||+.+++|-||||||||+.+     
T Consensus       154 v~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~  232 (415)
T KOG0671|consen  154 VQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFK  232 (415)
T ss_pred             EeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEE
Confidence            78888999999999999998 679999999988889999999999999999999999999999999999999842     


Q ss_pred             ---------------CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCC
Q 014344          164 ---------------NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPD  228 (426)
Q Consensus       164 ---------------~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (426)
                                     +-.|+|+|||.|+....                                                
T Consensus       233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e------------------------------------------------  264 (415)
T KOG0671|consen  233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE------------------------------------------------  264 (415)
T ss_pred             EeccCCccceeccCCCcceEEEecCCcceecc------------------------------------------------
Confidence                           23589999998876532                                                


Q ss_pred             CCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhcCCCCCC-
Q 014344          229 PPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE---TFYRILCRPPDLV-  304 (426)
Q Consensus       229 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~-  304 (426)
                                 .-.+.|.|..|+|||++.+.++++.+||||+||||+|+.+|...|+..+..+   +..+|+...|... 
T Consensus       265 -----------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi  333 (415)
T KOG0671|consen  265 -----------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMI  333 (415)
T ss_pred             -----------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHh
Confidence                       2245678999999999999999999999999999999999999999877655   4445543221100 


Q ss_pred             --------------C----------------C-------------CHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          305 --------------G----------------E-------------PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       305 --------------~----------------~-------------~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                    +                +             -.++.|||++||.+||.+|+|+.|+|.||||+.
T Consensus       334 ~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~  411 (415)
T KOG0671|consen  334 KKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFAR  411 (415)
T ss_pred             hhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhc
Confidence                          0                0             123789999999999999999999999999975

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=6.4e-43  Score=340.81  Aligned_cols=255  Identities=25%  Similarity=0.390  Sum_probs=204.5

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++.+.||.|+||.||+|.+..+++.||+|++....             ....+.+..|+.+++.++||||+++++++
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~-------------~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~   71 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD-------------PQSVKHALREIKIIRRLDHDNIVKVYEVL   71 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC-------------CchHHHHHHHHHHHHhcCCCcchhhHhhh
Confidence            67999999999999999999999999999999884321             12345677899999999999999999876


Q ss_pred             ecC--------------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee
Q 014344           96 STD--------------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI  161 (426)
Q Consensus        96 ~~~--------------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl  161 (426)
                      ...              ...|+||||+. ++|.+++..   ..+++..++.++.||+.||.|||+.||+||||||+||++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili  147 (342)
T cd07854          72 GPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI  147 (342)
T ss_pred             cccccccccccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            543              36899999997 688877653   348999999999999999999999999999999999999


Q ss_pred             cc-CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          162 QE-NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       162 ~~-~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                      +. ++.++|+|||++..+......                                                     ...
T Consensus       148 ~~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------------------~~~  174 (342)
T cd07854         148 NTEDLVLKIGDFGLARIVDPHYSH-----------------------------------------------------KGY  174 (342)
T ss_pred             cCCCceEEECCcccceecCCcccc-----------------------------------------------------ccc
Confidence            84 567899999998765321100                                                     000


Q ss_pred             ccccccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC------------------
Q 014344          241 SNSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP------------------  301 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~------------------  301 (426)
                      ....+|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....++...+                  
T Consensus       175 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (342)
T cd07854         175 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFV  254 (342)
T ss_pred             cccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhh
Confidence            112257889999998754 5678899999999999999999999988776555444322110                  


Q ss_pred             -------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 -------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 -------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                                   .....+..+.+||.+||+.||.+|||+.+++.||||+.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         255 RNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             hhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence                         012345678899999999999999999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.9e-43  Score=342.46  Aligned_cols=258  Identities=22%  Similarity=0.342  Sum_probs=206.8

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-C
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-E   84 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~   84 (426)
                      |.+..++|++++.||+|+||.||+|++.     .+++.||+|++....            .....+.+..|+.+++++ +
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~------------~~~~~~~~~~E~~~~~~l~~   69 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA------------TASEYKALMTELKILIHIGH   69 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC------------CHHHHHHHHHHHHHHHhhcc
Confidence            4556678999999999999999999754     345789999884321            112345677899999999 7


Q ss_pred             CCCcceeeeeeec-CCeEEEEEeccCCCChHHHHHHhcc-----------------------------------------
Q 014344           85 HPLLPRLRGVLST-DKFVGYAIDYCPGRDLHSLRKQQSE-----------------------------------------  122 (426)
Q Consensus        85 hp~iv~l~~~~~~-~~~~~lV~Ey~~gg~L~~l~~~~~~-----------------------------------------  122 (426)
                      ||||+++++++.. +..++++|||+++++|.+++.....                                         
T Consensus        70 h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (337)
T cd05054          70 HLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIE  149 (337)
T ss_pred             CcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCcccccccccccc
Confidence            9999999998754 5678999999999999998764321                                         


Q ss_pred             ------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCC
Q 014344          123 ------------------QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ  184 (426)
Q Consensus       123 ------------------~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~  184 (426)
                                        ..++...+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++..+..... 
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-  228 (337)
T cd05054         150 DKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-  228 (337)
T ss_pred             CcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-
Confidence                              2578999999999999999999999999999999999999999999999999986532110 


Q ss_pred             CCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChh
Q 014344          185 ASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFA  264 (426)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  264 (426)
                                                                           ........++..|+|||++.+..++.+
T Consensus       229 -----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~  255 (337)
T cd05054         229 -----------------------------------------------------YVRKGDARLPLKWMAPESIFDKVYTTQ  255 (337)
T ss_pred             -----------------------------------------------------hhhccCCCCCccccCcHHhcCCCCCcc
Confidence                                                                 001123346778999999999999999


Q ss_pred             hHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          265 VDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       265 ~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +|||||||++|+|++ |..||.+....+.+...+..   .......+..+.+++.+||+.+|++||+++||++|
T Consensus       256 ~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         256 SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             ccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999997 99999876544444333322   12223457789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.8e-42  Score=324.41  Aligned_cols=256  Identities=32%  Similarity=0.521  Sum_probs=212.3

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|+||.||++.+..+++.||+|++......           ....+.+..|+.+++.++|+||+++++.+.
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~   69 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-----------PKTIKEIADEMKVLELLKHPNLVKYYGVEV   69 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-----------hHHHHHHHHHHHHHHhCCCCChhheeeeEe
Confidence            589999999999999999999999999999998544221           235678899999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ....+++|+||+++++|.+++...  ..+++..++.++.|++.||.|||+.||+||||+|+||+++.++.+||+|||++.
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~  147 (264)
T cd06626          70 HREKVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAV  147 (264)
T ss_pred             cCCEEEEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccccccc
Confidence            999999999999999999987653  348899999999999999999999999999999999999999999999999988


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .........                                                    ........+++.|+|||++
T Consensus       148 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~PE~~  175 (264)
T cd06626         148 KLKNNTTTM----------------------------------------------------GEEVQSLAGTPAYMAPEVI  175 (264)
T ss_pred             ccCCCCCcc----------------------------------------------------cccccCCcCCcCccChhhc
Confidence            764321100                                                    0001224578899999999


Q ss_pred             cCCC---CChhhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcC-CCCC---CCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          257 EGKG---HDFAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCR-PPDL---VGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       257 ~~~~---~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~-~~~~---~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      .+..   ++.++|||||||++|+|++|+.||..... ......+... .+..   ...+..+.+||++||+.+|.+|||+
T Consensus       176 ~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  255 (264)
T cd06626         176 TGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTA  255 (264)
T ss_pred             cCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCH
Confidence            8766   88999999999999999999999976533 3333333322 1111   2236788999999999999999999


Q ss_pred             HHHhcCCCc
Q 014344          329 EEIKGHEFF  337 (426)
Q Consensus       329 ~eil~hp~f  337 (426)
                      .+++.|||+
T Consensus       256 ~~i~~~~~~  264 (264)
T cd06626         256 SELLQHPFV  264 (264)
T ss_pred             HHHhcCCCC
Confidence            999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.9e-43  Score=330.49  Aligned_cols=253  Identities=29%  Similarity=0.502  Sum_probs=212.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC---CCCcceeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE---HPLLPRLRG   93 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~l~~   93 (426)
                      .|++++.||+|+||.||+|.+..+++.||+|++....            .......+..|+.+++.+.   |||++++++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~------------~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~   69 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT------------PDDDVSDIQREVALLSQLRQSQPPNITKYYG   69 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC------------CchhHHHHHHHHHHHHHhccCCCCCeeeEee
Confidence            5889999999999999999999999999999984321            1223456778999999996   999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++..+...|+||||++|++|.++++..   .+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||
T Consensus        70 ~~~~~~~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg  146 (277)
T cd06917          70 SYLKGPRLWIIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFG  146 (277)
T ss_pred             eeeeCCEEEEEEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCC
Confidence            999999999999999999999987542   58999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++..+....                                                        .......|++.|+||
T Consensus       147 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aP  170 (277)
T cd06917         147 VAALLNQNS--------------------------------------------------------SKRSTFVGTPYWMAP  170 (277)
T ss_pred             ceeecCCCc--------------------------------------------------------cccccccCCcceeCH
Confidence            987654211                                                        112234588999999


Q ss_pred             hhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCC--CCCHHHHHHHHHHhccCCCCCCChH
Q 014344          254 EIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDLV--GEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       254 E~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~--~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      |.+.+ ..++.++|+|||||++|+|++|..||.+.........+... ++...  ..+..+.++|.+||..||++||++.
T Consensus       171 E~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~  250 (277)
T cd06917         171 EVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAE  250 (277)
T ss_pred             HHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHH
Confidence            99875 45688999999999999999999999887765544433222 22222  2567899999999999999999999


Q ss_pred             HHhcCCCcCCC
Q 014344          330 EIKGHEFFKGV  340 (426)
Q Consensus       330 eil~hp~f~~~  340 (426)
                      +++.||||+..
T Consensus       251 ~il~~~~~~~~  261 (277)
T cd06917         251 ELLKSKWIKAH  261 (277)
T ss_pred             HHhhChHhhcc
Confidence            99999999754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-44  Score=315.07  Aligned_cols=262  Identities=24%  Similarity=0.320  Sum_probs=204.4

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ++-++|+|.+.||.|||+.||+++...+++.||+|.+....             .+..+..++|++..++++|||+++++
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-------------~~~~e~~~rEid~~rkf~s~~vl~l~   84 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-------------QEDIEEALREIDNHRKFNSPNVLRLV   84 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-------------hHHHHHHHHHHHHHHhhCCcchHHHH
Confidence            55678999999999999999999999999999999984432             23567889999999999999999998


Q ss_pred             eeeecC-----CeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeeecc
Q 014344           93 GVLSTD-----KFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQE  163 (426)
Q Consensus        93 ~~~~~~-----~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiLl~~  163 (426)
                      +....+     ...|+++.|...|+|.+.++..  .+..+++.++..|+.+|+.||++||+..  ++||||||.|||+.+
T Consensus        85 dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~  164 (302)
T KOG2345|consen   85 DHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD  164 (302)
T ss_pred             HHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC
Confidence            876433     3599999999999999987644  2336999999999999999999999998  999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++.++|.|||.++...-....           +........|..                                    
T Consensus       165 ~~~~vl~D~GS~~~a~i~i~~-----------~~~a~~lQe~a~------------------------------------  197 (302)
T KOG2345|consen  165 SGLPVLMDLGSATQAPIQIEG-----------SRQALRLQEWAE------------------------------------  197 (302)
T ss_pred             CCceEEEeccCccccceEeec-----------hHHHHHHHHHHH------------------------------------
Confidence            999999999998865321100           000000011111                                    


Q ss_pred             cccCCCCccchhhcCCCC---ChhhHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHh---cCCCCCCCCCHHHHHHHH
Q 014344          244 FVGTEEYVAPEIIEGKGH---DFAVDWWSLGVVLHEMLYGATPFRGSSRK--ETFYRIL---CRPPDLVGEPTPLRNLIR  315 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~~~---~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~~~~i~---~~~~~~~~~~~~~~~li~  315 (426)
                      -..|..|+|||++..+.+   +.++|||||||++|+|++|..||...-..  .....+.   ...|.....+..+.+||.
T Consensus       198 e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik  277 (302)
T KOG2345|consen  198 ERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIK  277 (302)
T ss_pred             HhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHH
Confidence            125788999999987654   78999999999999999999999643210  0000011   112222336888999999


Q ss_pred             HHhccCCCCCCChHHHhcC
Q 014344          316 RLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       316 ~~L~~dP~~R~s~~eil~h  334 (426)
                      .||+.||.+||++.+++.+
T Consensus       278 ~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  278 SMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             HHhcCCcccCCCHHHHHHH
Confidence            9999999999999999865

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.5e-42  Score=326.27  Aligned_cols=255  Identities=25%  Similarity=0.439  Sum_probs=205.6

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +..+.+.....||+|+||.||+|.+..++..||+|.+....             ....+.+.+|+.+++.++|+||++++
T Consensus         5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~iv~~~   71 (268)
T cd06624           5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-------------SRYVQPLHEEIALHSYLKHRNIVQYL   71 (268)
T ss_pred             cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC-------------HHHHHHHHHHHHHHHhcCCCCeeeee
Confidence            34455556678999999999999999999999999874321             12345788899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCC--CHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-CCcEEE
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF--SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-NGHIML  169 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l--~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-~g~ikL  169 (426)
                      +++..+...++|+||+++++|.+++.... ..+  ++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|
T Consensus        72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l  150 (268)
T cd06624          72 GSDSENGFFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKI  150 (268)
T ss_pred             eeeccCCEEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEE
Confidence            99999999999999999999999887543 235  78889999999999999999999999999999999986 679999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                        .......|++.
T Consensus       151 ~dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~  174 (268)
T cd06624         151 SDFGTSKRLAGIN--------------------------------------------------------PCTETFTGTLQ  174 (268)
T ss_pred             ecchhheecccCC--------------------------------------------------------CccccCCCCcc
Confidence            9999987543111                                                        01112347889


Q ss_pred             CccchhhcCCC--CChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH-h-cC-CCCCCCCCHHHHHHHHHHhccCCC
Q 014344          250 YVAPEIIEGKG--HDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRI-L-CR-PPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       250 y~aPE~~~~~~--~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i-~-~~-~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      |+|||++.+..  ++.++|+||+||++|+|++|+.||...... ...... . .. +......+..+.+||.+||..+|.
T Consensus       175 ~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  254 (268)
T cd06624         175 YMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPD  254 (268)
T ss_pred             ccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCch
Confidence            99999987643  788999999999999999999999764322 111111 1 11 122234577899999999999999


Q ss_pred             CCCChHHHhcCCCc
Q 014344          324 KRIGVEEIKGHEFF  337 (426)
Q Consensus       324 ~R~s~~eil~hp~f  337 (426)
                      +|||+.+++.||||
T Consensus       255 ~Rpt~~~ll~~~~~  268 (268)
T cd06624         255 KRASAHDLLQDPFL  268 (268)
T ss_pred             hCCCHHHHHhCCCC
Confidence            99999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.4e-42  Score=323.16  Aligned_cols=254  Identities=30%  Similarity=0.483  Sum_probs=218.1

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|+||.||+|.+..+++.||+|++.....           .......+..|+++++.++|||++++++.+.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~   69 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-----------SEKEREDALNEVKILKKLNHPNIIKYYESFE   69 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-----------ChHHHHHHHHHHHHHHhcCCCChhheEEEEe
Confidence            58999999999999999999999999999999854321           1234556788999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      .....++|+||+++++|.+++....  ...+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||+
T Consensus        70 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~  149 (258)
T cd08215          70 EKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGI  149 (258)
T ss_pred             cCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccc
Confidence            9999999999999999999887653  35699999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        .......|++.|+|||
T Consensus       150 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~pe  173 (258)
T cd08215         150 SKVLSSTV--------------------------------------------------------DLAKTVVGTPYYLSPE  173 (258)
T ss_pred             eeecccCc--------------------------------------------------------ceecceeeeecccChh
Confidence            87653211                                                        1122346889999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      .+.+..++.++|+||+|+++|+|++|..||...+..+..........  .....+..+.++|.+||..+|++|||+.++|
T Consensus       174 ~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll  253 (258)
T cd08215         174 LCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQIL  253 (258)
T ss_pred             HhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            99988899999999999999999999999988877666665544321  2224578899999999999999999999999


Q ss_pred             cCCCc
Q 014344          333 GHEFF  337 (426)
Q Consensus       333 ~hp~f  337 (426)
                      .||||
T Consensus       254 ~~~~~  258 (258)
T cd08215         254 QSPFI  258 (258)
T ss_pred             cCCCC
Confidence            99997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-42  Score=328.56  Aligned_cols=256  Identities=23%  Similarity=0.266  Sum_probs=211.4

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCC-----CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVES-----SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      .+..++|++++.||+|+||.||+|.+...     +..||+|.+....            .......+..|+.+|+.++||
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~------------~~~~~~~~~~e~~~l~~~~~~   69 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA------------SMRERIEFLNEASVMKEFNCH   69 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc------------CHHHHHHHHHHHHHHHhCCCC
Confidence            56778999999999999999999998644     3789999974321            112345677899999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCC
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPEN  158 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~N  158 (426)
                      ||+++++++......|+||||+++++|.+++....        ...+++..+..++.||+.||.|||+.||+||||||+|
T Consensus        70 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~n  149 (277)
T cd05032          70 HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARN  149 (277)
T ss_pred             ceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChhe
Confidence            99999999999999999999999999999876532        1236788999999999999999999999999999999


Q ss_pred             eeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          159 IMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS  238 (426)
Q Consensus       159 iLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (426)
                      ||++.++.+||+|||+++.+.....                                                      .
T Consensus       150 ill~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------------~  175 (277)
T cd05032         150 CMVAEDLTVKIGDFGMTRDIYETDY------------------------------------------------------Y  175 (277)
T ss_pred             EEEcCCCCEEECCcccchhhccCcc------------------------------------------------------c
Confidence            9999999999999999876532110                                                      0


Q ss_pred             CCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHH
Q 014344          239 EKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIR  315 (426)
Q Consensus       239 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~  315 (426)
                      .......+|..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+....+....  ......+..+.++|.
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  255 (277)
T cd05032         176 RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMR  255 (277)
T ss_pred             ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            01122346788999999988889999999999999999998 999999888777666555321  223345788999999


Q ss_pred             HHhccCCCCCCChHHHhc
Q 014344          316 RLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       316 ~~L~~dP~~R~s~~eil~  333 (426)
                      +||+.+|++|||+.+|++
T Consensus       256 ~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         256 MCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HHcCCChhhCCCHHHHHH
Confidence            999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.2e-42  Score=328.73  Aligned_cols=256  Identities=19%  Similarity=0.280  Sum_probs=209.8

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      +..++|++.+.||+|+||.||+|.+..     ++..||+|.+....            .......+..|+.+++.++|+|
T Consensus         3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~------------~~~~~~~~~~e~~~l~~l~~~~   70 (277)
T cd05036           3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC------------SEQDESDFLMEALIMSKFNHQN   70 (277)
T ss_pred             CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC------------CHHHHHHHHHHHHHHHhCCCCC
Confidence            445779999999999999999999977     77889999874321            1112346788999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE-----QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ  162 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~-----~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~  162 (426)
                      |+++++++......++||||+.|++|.+++.....     ..+++..+..++.||+.||+|||++|++||||||+|||++
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~  150 (277)
T cd05036          71 IVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLT  150 (277)
T ss_pred             EeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEe
Confidence            99999999999999999999999999999876532     2488999999999999999999999999999999999998


Q ss_pred             cCC---cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          163 ENG---HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE  239 (426)
Q Consensus       163 ~~g---~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (426)
                      .++   .+||+|||++..+.....                                                      ..
T Consensus       151 ~~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------------~~  176 (277)
T cd05036         151 CKGPGRVAKIADFGMARDIYRASY------------------------------------------------------YR  176 (277)
T ss_pred             ccCCCcceEeccCccccccCCccc------------------------------------------------------ee
Confidence            765   699999999886532110                                                      00


Q ss_pred             CccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHH
Q 014344          240 KSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRR  316 (426)
Q Consensus       240 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~  316 (426)
                      ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...  .......+..+.++|.+
T Consensus       177 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  256 (277)
T cd05036         177 KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTD  256 (277)
T ss_pred             cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHH
Confidence            0111224567999999998889999999999999999996 99999988776665554432  22234567889999999


Q ss_pred             HhccCCCCCCChHHHhcC
Q 014344          317 LLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~h  334 (426)
                      ||+.+|++||++.++++|
T Consensus       257 cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         257 CWQHTPEDRPNFATILER  274 (277)
T ss_pred             HcCCCcccCcCHHHHHHH
Confidence            999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=6.6e-43  Score=330.50  Aligned_cols=252  Identities=26%  Similarity=0.427  Sum_probs=213.7

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      -|++++.||+|+||.||+|.+..+++.||||++.....            ......+.+|+.+++.++||||+++++++.
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   72 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA------------EDEIEDIQQEITVLSQCDSPYVTKYYGSYL   72 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc------------hHHHHHHHHHHHHHHhcCCCCEeEEEEEEE
Confidence            48899999999999999999999999999998743211            123467888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+...|+||||+.+++|..++..   ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.
T Consensus        73 ~~~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~  149 (277)
T cd06641          73 KDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAG  149 (277)
T ss_pred             eCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccce
Confidence            99999999999999999988763   348999999999999999999999999999999999999999999999999986


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+....                                                        .......|+..|+|||.+
T Consensus       150 ~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~PE~~  173 (277)
T cd06641         150 QLTDTQ--------------------------------------------------------IKRNTFVGTPFWMAPEVI  173 (277)
T ss_pred             ecccch--------------------------------------------------------hhhccccCCccccChhhh
Confidence            553210                                                        011233578899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-C-CCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-D-LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+..++.++|+||+||++|+|++|..||...........+..... . ....+..+.++|.+||..+|.+||++.++++|
T Consensus       174 ~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         174 KQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            888889999999999999999999999988776655555433222 1 22457889999999999999999999999999


Q ss_pred             CCcCC
Q 014344          335 EFFKG  339 (426)
Q Consensus       335 p~f~~  339 (426)
                      |||..
T Consensus       254 ~~~~~  258 (277)
T cd06641         254 KFIVR  258 (277)
T ss_pred             HHHhh
Confidence            99965

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-42  Score=325.15  Aligned_cols=252  Identities=20%  Similarity=0.296  Sum_probs=211.1

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ++..++|++.+.||+|++|.||+|.+. +++.||+|.+.....              ..+.+..|+.++++++||||+++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~   66 (261)
T cd05068           2 EIDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM--------------DPKDFLAEAQIMKKLRHPKLIQL   66 (261)
T ss_pred             ccchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc--------------cHHHHHHHHHHHHHCCCCCccce
Confidence            466778999999999999999999975 457899999843211              13457789999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++...+.+|+||||+.|++|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++.++|+|
T Consensus        67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d  146 (261)
T cd05068          67 YAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVAD  146 (261)
T ss_pred             eEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECC
Confidence            99999999999999999999999998765545689999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++........                                                       .......++..|+
T Consensus       147 fg~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~  171 (261)
T cd05068         147 FGLARVIKEDIY-------------------------------------------------------EAREGAKFPIKWT  171 (261)
T ss_pred             cceEEEccCCcc-------------------------------------------------------cccCCCcCceecc
Confidence            999887641100                                                       0000112345799


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||++.+..++.++|+|||||++|+|++ |+.||.+.+....+..+....  +.....+..+.+++.+||..+|.+||++
T Consensus       172 aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  251 (261)
T cd05068         172 APEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTF  251 (261)
T ss_pred             CccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCH
Confidence            9999999899999999999999999998 999999888777666664332  2334567889999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      ++|+.
T Consensus       252 ~~l~~  256 (261)
T cd05068         252 ETLQW  256 (261)
T ss_pred             HHHHH
Confidence            99874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=8.9e-43  Score=326.33  Aligned_cols=251  Identities=20%  Similarity=0.319  Sum_probs=208.3

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+..++|+++++||+|+||.||+|.+. .+..+|+|.+.....              ....+.+|+.++++++||+++++
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~--------------~~~~~~~E~~~l~~l~~~~i~~~   66 (260)
T cd05070           2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM--------------SPESFLEEAQIMKKLRHDKLVQL   66 (260)
T ss_pred             CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC--------------CHHHHHHHHHHHHhcCCCceEEE
Confidence            456678999999999999999999875 566799999854211              12457889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++. ....|++|||+.+++|.+++.......+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|
T Consensus        67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~d  145 (260)
T cd05070          67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIAD  145 (260)
T ss_pred             EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCC
Confidence            99885 45689999999999999998765555689999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+.....                                                       .......++..|+
T Consensus       146 fg~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~  170 (260)
T cd05070         146 FGLARLIEDNEY-------------------------------------------------------TARQGAKFPIKWT  170 (260)
T ss_pred             ceeeeeccCccc-------------------------------------------------------ccccCCCCCcccc
Confidence            999876532110                                                       0011223566799


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||.+.+..++.++|+|||||++|+|++ |.+||.+.+..+....+...  .+.....+..+.+||.+||..+|.+|||+
T Consensus       171 aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  250 (260)
T cd05070         171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTF  250 (260)
T ss_pred             ChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCH
Confidence            9999988889999999999999999999 99999988877776666533  22334567889999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      .+++.
T Consensus       251 ~~l~~  255 (260)
T cd05070         251 EYLQS  255 (260)
T ss_pred             HHHHH
Confidence            98864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-42  Score=325.41  Aligned_cols=254  Identities=23%  Similarity=0.319  Sum_probs=211.5

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCC---CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVES---SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      +.++|++.+.||+|+||+||+|....+   ...||+|++....            .......+..|+.+++.++||||++
T Consensus         2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~i~~   69 (266)
T cd05033           2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS------------SDKQRLDFLTEASIMGQFDHPNIIR   69 (266)
T ss_pred             ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC------------ChHHHHHHHHHHHHHHhCCCCCcce
Confidence            457899999999999999999998654   4579999874321            1123456778999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++......++||||+++++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+
T Consensus        70 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~  148 (266)
T cd05033          70 LEGVVTKSRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVS  148 (266)
T ss_pred             EeEEEecCCceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEEC
Confidence            9999999999999999999999999987644 358999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++..+.....                                                      ........+++.|
T Consensus       149 dfg~~~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y  174 (266)
T cd05033         149 DFGLSRRLEDSEA------------------------------------------------------TYTTKGGKIPIRW  174 (266)
T ss_pred             ccchhhccccccc------------------------------------------------------ceeccCCCCCccc
Confidence            9999987641110                                                      0001112356789


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      +|||.+.+..++.++|||||||++|+|++ |..||......+....+..  ..+.....+..+.+|+.+||+.+|++||+
T Consensus       175 ~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~  254 (266)
T cd05033         175 TAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPT  254 (266)
T ss_pred             cChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence            99999999899999999999999999997 9999988777666665543  22334466889999999999999999999


Q ss_pred             hHHHhcC
Q 014344          328 VEEIKGH  334 (426)
Q Consensus       328 ~~eil~h  334 (426)
                      +.+|+++
T Consensus       255 ~~ei~~~  261 (266)
T cd05033         255 FSQIVST  261 (266)
T ss_pred             HHHHHHH
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=4.7e-43  Score=332.30  Aligned_cols=256  Identities=20%  Similarity=0.329  Sum_probs=212.4

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCC-----CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVES-----SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      +++.+|++++.||+|+||+||+|.+..+     ++.||||++....            .......+..|+.+++.++|||
T Consensus         2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~e~~~~~~l~h~~   69 (283)
T cd05091           2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA------------EGPLREEFKHEAMMRSRLQHPN   69 (283)
T ss_pred             CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC------------CHHHHHHHHHHHHHHhcCCCCC
Confidence            5678899999999999999999987543     5789999985321            1123456788999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRD  153 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrD  153 (426)
                      |+++++++......++++||+.+++|.+++....              ...++...+..++.|++.||.|||++||+|||
T Consensus        70 iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~d  149 (283)
T cd05091          70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKD  149 (283)
T ss_pred             cCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            9999999999999999999999999999875321              23478889999999999999999999999999


Q ss_pred             CCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 014344          154 LKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS  233 (426)
Q Consensus       154 lKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (426)
                      |||+|||++.++.+||+|||+++.......                                                  
T Consensus       150 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------------  179 (283)
T cd05091         150 LATRNVLVFDKLNVKISDLGLFREVYAADY--------------------------------------------------  179 (283)
T ss_pred             cchhheEecCCCceEecccccccccccchh--------------------------------------------------
Confidence            999999999999999999999876532110                                                  


Q ss_pred             CCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHH
Q 014344          234 DSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPP--DLVGEPTPL  310 (426)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~  310 (426)
                          ........+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+.....  ...+.+..+
T Consensus       180 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  255 (283)
T cd05091         180 ----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWV  255 (283)
T ss_pred             ----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHH
Confidence                001122346788999999988889999999999999999997 9999998888777776654432  234568889


Q ss_pred             HHHHHHHhccCCCCCCChHHHhcC
Q 014344          311 RNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       311 ~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+|+.+||+.+|.+||++++|+..
T Consensus       256 ~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         256 YTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HHHHHHHhCCCcccCCCHHHHHHH
Confidence            999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.5e-42  Score=324.09  Aligned_cols=247  Identities=21%  Similarity=0.346  Sum_probs=207.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      +.++..+|++.+.||+|+||.||++..  .+..+|+|.+...               ...+.+..|+.+++.++|+++++
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~---------------~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd05082           1 WALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND---------------ATAQAFLAEASVMTQLRHSNLVQ   63 (256)
T ss_pred             CCccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC---------------chHHHHHHHHHHHHhCCCCCeee
Confidence            356788999999999999999999975  4788999987322               12346778999999999999999


Q ss_pred             eeeee-ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           91 LRGVL-STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        91 l~~~~-~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +++++ ..+...|+||||+++++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++.+||
T Consensus        64 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl  143 (256)
T cd05082          64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKV  143 (256)
T ss_pred             EEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEe
Confidence            99875 55678999999999999999987765556899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                           ....++..
T Consensus       144 ~dfg~~~~~~~~~-----------------------------------------------------------~~~~~~~~  164 (256)
T cd05082         144 SDFGLTKEASSTQ-----------------------------------------------------------DTGKLPVK  164 (256)
T ss_pred             cCCccceeccccC-----------------------------------------------------------CCCcccee
Confidence            9999887542110                                                           11124567


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+....  ......+..+.++|.+||..+|++||
T Consensus       165 y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  244 (256)
T cd05082         165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRP  244 (256)
T ss_pred             ecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCc
Confidence            999999999889999999999999999997 999999887766665554322  22335678899999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      |+.++++
T Consensus       245 t~~~l~~  251 (256)
T cd05082         245 SFLQLRE  251 (256)
T ss_pred             CHHHHHH
Confidence            9999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.6e-43  Score=326.13  Aligned_cols=250  Identities=22%  Similarity=0.309  Sum_probs=207.6

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      +..+|++.+.||+|+||.||+|.+. ++..+|+|++.+...              ....+..|+.+++.++||||+++++
T Consensus         2 ~~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~   66 (256)
T cd05059           2 DPSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM--------------SEDDFIEEAKVMMKLSHPNLVQLYG   66 (256)
T ss_pred             ChHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC--------------CHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            4567999999999999999999875 467899999843211              1235677999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++......|+||||++|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||
T Consensus        67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg  145 (256)
T cd05059          67 VCTKQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFG  145 (256)
T ss_pred             EEcCCCceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcc
Confidence            9999999999999999999999887544 358999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++........                                                       .......++..|+||
T Consensus       146 ~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~P  170 (256)
T cd05059         146 LARYVLDDQY-------------------------------------------------------TSSQGTKFPVKWAPP  170 (256)
T ss_pred             cceecccccc-------------------------------------------------------cccCCCCCCccccCH
Confidence            9875431100                                                       000011234579999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |.+.+..++.++|+|||||++|+|++ |..||...+..+....+...  .......+..+.+++.+||..+|++|||+.+
T Consensus       171 e~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  250 (256)
T cd05059         171 EVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKK  250 (256)
T ss_pred             HHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence            99999999999999999999999998 89999888777666665433  2233456889999999999999999999999


Q ss_pred             HhcC
Q 014344          331 IKGH  334 (426)
Q Consensus       331 il~h  334 (426)
                      +++.
T Consensus       251 ~l~~  254 (256)
T cd05059         251 LLSQ  254 (256)
T ss_pred             HHHH
Confidence            9863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=9.8e-43  Score=334.37  Aligned_cols=252  Identities=27%  Similarity=0.434  Sum_probs=210.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ..|++++.||+|+||+||+|.+..+++.||+|++.....          ........+..|+.+++.++||||+++++++
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~----------~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~   84 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK----------QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCY   84 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc----------CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            459999999999999999999999999999999843211          1123446788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+...|+||||+. |+|.+++.... +.+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++
T Consensus        85 ~~~~~~~lv~e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~  162 (307)
T cd06607          85 LREHTAWLVMEYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSA  162 (307)
T ss_pred             EeCCeEEEEHHhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcc
Confidence            99999999999997 66766665433 45899999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .....                                                            .....|++.|+|||+
T Consensus       163 ~~~~~------------------------------------------------------------~~~~~~~~~y~aPE~  182 (307)
T cd06607         163 SLVSP------------------------------------------------------------ANSFVGTPYWMAPEV  182 (307)
T ss_pred             eecCC------------------------------------------------------------CCCccCCccccCcee
Confidence            64321                                                            112357888999998


Q ss_pred             hc---CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCC--CCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          256 IE---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PDL--VGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       256 ~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~--~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      +.   ...++.++|||||||++|+|++|..||.+.+.......+.... +..  ...+..+.++|.+||..+|++||++.
T Consensus       183 ~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  262 (307)
T cd06607         183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSE  262 (307)
T ss_pred             eeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHH
Confidence            74   3557889999999999999999999999887766655554332 221  23467899999999999999999999


Q ss_pred             HHhcCCCcCC
Q 014344          330 EIKGHEFFKG  339 (426)
Q Consensus       330 eil~hp~f~~  339 (426)
                      +|+.||||..
T Consensus       263 ~il~~~~~~~  272 (307)
T cd06607         263 ELLKHRFVLR  272 (307)
T ss_pred             HHhcChhhcc
Confidence            9999999964

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.2e-42  Score=324.85  Aligned_cols=251  Identities=18%  Similarity=0.251  Sum_probs=207.8

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ++.++|++++.||+|+||+||++.... +..+|+|.+.....              ....+..|+.+++.++||||++++
T Consensus         1 ~~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~   65 (256)
T cd05113           1 IDPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM--------------SEDEFIEEAKVMMKLSHEKLVQLY   65 (256)
T ss_pred             CChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc--------------cHHHHHHHHHHHhcCCCCCeeeEE
Confidence            356789999999999999999998643 45699998743211              124577899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++.....+|+||||+.+++|.+++..... .+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+||
T Consensus        66 ~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~  144 (256)
T cd05113          66 GVCTKQRPIYIVTEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDF  144 (256)
T ss_pred             EEEccCCCcEEEEEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCC
Confidence            999999999999999999999998875433 5899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++........                                                       .......++..|+|
T Consensus       145 g~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~  169 (256)
T cd05113         145 GLSRYVLDDEY-------------------------------------------------------TSSVGSKFPVRWSP  169 (256)
T ss_pred             ccceecCCCce-------------------------------------------------------eecCCCccChhhCC
Confidence            98875421100                                                       00011235677999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||.+.+..++.++|+|||||++|+|++ |..||...+..+....+.....  .....+..+.+++.+||..+|.+||++.
T Consensus       170 pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~  249 (256)
T cd05113         170 PEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQ  249 (256)
T ss_pred             HHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence            999998889999999999999999998 9999988877666666654322  2234578899999999999999999999


Q ss_pred             HHhcC
Q 014344          330 EIKGH  334 (426)
Q Consensus       330 eil~h  334 (426)
                      +|+.+
T Consensus       250 ~ll~~  254 (256)
T cd05113         250 QLLSS  254 (256)
T ss_pred             HHHHh
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1e-44  Score=348.25  Aligned_cols=244  Identities=27%  Similarity=0.443  Sum_probs=210.5

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .|++.++...-++-||+|+.|.||+++.  .++.||||.+..                    .-..+++-|++|+||||+
T Consensus       118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e--------------------lkETdIKHLRkLkH~NII  175 (904)
T KOG4721|consen  118 LWEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE--------------------LKETDIKHLRKLKHPNII  175 (904)
T ss_pred             hccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhh--------------------hhhhhHHHHHhccCccee
Confidence            6778888888899999999999999985  468999998721                    112378889999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      .+.+++...-++|||||||..|-|+..++..  ..++......|..+|+.|+.|||.+.|||||||.-||||+.+..|||
T Consensus       176 ~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKI  253 (904)
T KOG4721|consen  176 TFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKI  253 (904)
T ss_pred             eEeeeecCCceeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEe
Confidence            9999999999999999999999999998754  45899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||-++.....                                                         ....+|+||..
T Consensus       254 sDFGTS~e~~~~---------------------------------------------------------STkMSFaGTVa  276 (904)
T KOG4721|consen  254 SDFGTSKELSDK---------------------------------------------------------STKMSFAGTVA  276 (904)
T ss_pred             ccccchHhhhhh---------------------------------------------------------hhhhhhhhhHh
Confidence            999988765321                                                         23567899999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||||+|+..+.+.++|||||||+|||||||..||..-+...+..-+-   -..+.+..+|..++=||+.||.-.|.+||
T Consensus       277 WMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRP  356 (904)
T KOG4721|consen  277 WMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRP  356 (904)
T ss_pred             hhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCc
Confidence            999999999999999999999999999999999998776654433221   12233345678899999999999999999


Q ss_pred             ChHHHhcC
Q 014344          327 GVEEIKGH  334 (426)
Q Consensus       327 s~~eil~h  334 (426)
                      ++.+||.|
T Consensus       357 SFrqil~H  364 (904)
T KOG4721|consen  357 SFRQILLH  364 (904)
T ss_pred             cHHHHHHH
Confidence            99999998

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1.6e-42  Score=322.93  Aligned_cols=245  Identities=22%  Similarity=0.309  Sum_probs=201.7

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      +.||+|+||.||+|.+..+++.||+|.+....            ..+....+.+|+.+++.++||||+++++++......
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   68 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL------------PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI   68 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC------------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCe
Confidence            46899999999999999999999999874321            122346788899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK  181 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~  181 (426)
                      |+||||+.+++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        69 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  147 (252)
T cd05084          69 YIVMELVQGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG  147 (252)
T ss_pred             EEEEeeccCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccc
Confidence            99999999999999886543 35899999999999999999999999999999999999999999999999998754311


Q ss_pred             CCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCC
Q 014344          182 TPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH  261 (426)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  261 (426)
                      ...                                                      .......++..|+|||.+.+..+
T Consensus       148 ~~~------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~  173 (252)
T cd05084         148 VYA------------------------------------------------------STGGMKQIPVKWTAPEALNYGRY  173 (252)
T ss_pred             ccc------------------------------------------------------ccCCCCCCceeecCchhhcCCCC
Confidence            000                                                      00001123457999999999889


Q ss_pred             ChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          262 DFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       262 ~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.++|+|||||++|+|++ |..||...+.......+...  .+.....+..+.+|+.+||+.+|++|||+.++++
T Consensus       174 ~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         174 SSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999997 99999877766555544432  2223345788999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=9.8e-43  Score=345.28  Aligned_cols=258  Identities=19%  Similarity=0.265  Sum_probs=208.4

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCC-----CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVES-----SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      -++.+.++|++++.||+|+||+||+|.+...     +..||||++....            .......+.+|+.+|+++.
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~------------~~~~~~~~~~Ei~~l~~l~   98 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA------------RSSEKQALMSELKIMTHLG   98 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC------------ChHHHHHHHHHHHHHHhcC
Confidence            4567788899999999999999999987433     3469999984321            1123457888999999996


Q ss_pred             -CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc------------------------------------------
Q 014344           85 -HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS------------------------------------------  121 (426)
Q Consensus        85 -hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~------------------------------------------  121 (426)
                       ||||+++++++.....+|+|||||++|+|.+++....                                          
T Consensus        99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (400)
T cd05105          99 PHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYM  178 (400)
T ss_pred             CCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccc
Confidence             9999999999999999999999999999998876431                                          


Q ss_pred             ----------------------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014344          122 ----------------------------------------------------EQMFSDDTIRFYAAELVLALEYLHNMGI  149 (426)
Q Consensus       122 ----------------------------------------------------~~~l~~~~~~~~~~qil~aL~~LH~~gi  149 (426)
                                                                          ...+++..+..++.||+.||+|||+.||
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i  258 (400)
T cd05105         179 DMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNC  258 (400)
T ss_pred             ccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence                                                                1247788889999999999999999999


Q ss_pred             cccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCC
Q 014344          150 VYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDP  229 (426)
Q Consensus       150 iHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (426)
                      +||||||+|||++.++.+||+|||++..+.....                                              
T Consensus       259 vH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~----------------------------------------------  292 (400)
T cd05105         259 VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN----------------------------------------------  292 (400)
T ss_pred             eCCCCChHhEEEeCCCEEEEEeCCcceecccccc----------------------------------------------
Confidence            9999999999999999999999999876532110                                              


Q ss_pred             CCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---CCCCCC
Q 014344          230 PSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---PPDLVG  305 (426)
Q Consensus       230 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---~~~~~~  305 (426)
                              ........+++.|+|||++.+..++.++|||||||++|+|++ |..||........+...+..   .+....
T Consensus       293 --------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~  364 (400)
T cd05105         293 --------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDH  364 (400)
T ss_pred             --------ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCcc
Confidence                    001123357788999999999999999999999999999997 99999876554444333222   223345


Q ss_pred             CCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          306 EPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       306 ~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .+..+.++|.+||+.||++||++.+|.+
T Consensus       365 ~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         365 ATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            6788999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.9e-43  Score=341.21  Aligned_cols=251  Identities=30%  Similarity=0.462  Sum_probs=209.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|++|.||+|++..+++.||+|++.....           .......+.+|+.+++.++||||++++++
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   82 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-----------SAIHAKRTYRELRLLKHMDHENVIGLLDV   82 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-----------hhhHHHHHHHHHHHHHhccCCCHHHHHHH
Confidence            4579999999999999999999999999999998853211           11234567789999999999999999998


Q ss_pred             eecCCe------EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTDKF------VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~~~------~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +.....      +|+|+||+ |++|.+++..   ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~k  158 (343)
T cd07851          83 FTPASSLEDFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK  158 (343)
T ss_pred             hhccccccccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEE
Confidence            876654      89999999 6799988764   3499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++......                                                           .....+|+
T Consensus       159 L~dfg~~~~~~~~-----------------------------------------------------------~~~~~~~~  179 (343)
T cd07851         159 ILDFGLARHTDDE-----------------------------------------------------------MTGYVATR  179 (343)
T ss_pred             Ecccccccccccc-----------------------------------------------------------ccCCcccc
Confidence            9999998754211                                                           12235788


Q ss_pred             CCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------------------------
Q 014344          249 EYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--------------------------  301 (426)
Q Consensus       249 ~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--------------------------  301 (426)
                      .|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+.....                          
T Consensus       180 ~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (343)
T cd07851         180 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMP  259 (343)
T ss_pred             cccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccC
Confidence            9999999865 4678999999999999999999999988776665554432110                          


Q ss_pred             ------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          302 ------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       302 ------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                            .....+..+.+||.+||..||.+|||+.+|+.||||+.
T Consensus       260 ~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~  303 (343)
T cd07851         260 KKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE  303 (343)
T ss_pred             CCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence                  01234778999999999999999999999999999985

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-42  Score=323.53  Aligned_cols=258  Identities=25%  Similarity=0.430  Sum_probs=213.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++.+.||+|+||.||+|.+..+++.||+|++......        .........+.+|+.++++++||||+++++.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--------~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~   73 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS--------QETSKEVNALECEIQLLKNLRHDRIVQYYGCL   73 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc--------chhhHHHHHHHHHHHHHHHcCCCCcceEEEEE
Confidence            5799999999999999999999999999999987432110        01123456788899999999999999999998


Q ss_pred             ecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           96 STD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        96 ~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      .+.  ..++++|||++|++|.+++....  .+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||
T Consensus        74 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg  151 (264)
T cd06653          74 RDPEEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG  151 (264)
T ss_pred             EcCCCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccc
Confidence            664  56899999999999999876543  48899999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++........                                                     .........|+..|+||
T Consensus       152 ~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~y~aP  178 (264)
T cd06653         152 ASKRIQTICM-----------------------------------------------------SGTGIKSVTGTPYWMSP  178 (264)
T ss_pred             cccccccccc-----------------------------------------------------cCccccccCCcccccCH
Confidence            9876532100                                                     00011234588999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |.+.+..++.++|+|||||++|+|++|+.||..........++...+.   .....+..+.++|.+||. +|.+||++.+
T Consensus       179 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~  257 (264)
T cd06653         179 EVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEF  257 (264)
T ss_pred             hhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHH
Confidence            999998899999999999999999999999988777666666553322   233457889999999999 5799999999


Q ss_pred             HhcCCCc
Q 014344          331 IKGHEFF  337 (426)
Q Consensus       331 il~hp~f  337 (426)
                      ++.|||.
T Consensus       258 ~~~~~~~  264 (264)
T cd06653         258 LLRHPFV  264 (264)
T ss_pred             HhcCCCC
Confidence            9999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-42  Score=323.72  Aligned_cols=252  Identities=21%  Similarity=0.303  Sum_probs=212.9

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ++..++|++.+.||+|+||+||+|.+. +++.+|||.+....              .....+..|+.+++.++||||+++
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~--------------~~~~~~~~e~~~l~~l~h~~i~~~   66 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT--------------MSPEAFLQEAQIMKKLRHDKLVQL   66 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc--------------cCHHHHHHHHHHHhhCCCCCEeee
Confidence            567789999999999999999999975 45789999884321              123467889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++......++||||+++++|.+++.......++...+..++.||+.||.|||++||+||||||+||+++.++.++|+|
T Consensus        67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d  146 (261)
T cd05034          67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIAD  146 (261)
T ss_pred             eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECc
Confidence            99999989999999999999999998776555699999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+.....                                                       .......++..|+
T Consensus       147 ~g~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~  171 (261)
T cd05034         147 FGLARLIEDDEY-------------------------------------------------------TAREGAKFPIKWT  171 (261)
T ss_pred             cccceeccchhh-------------------------------------------------------hhhhccCCCcccc
Confidence            999876532100                                                       0001112456799


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||.+.+..++.++|+||+||++|+|++ |+.||.+.+.......+...  .+.....+..+.+++.+||..+|.+||++
T Consensus       172 ~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  251 (261)
T cd05034         172 APEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTF  251 (261)
T ss_pred             CHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            9999999889999999999999999998 99999988877777776543  23334557889999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      ++++.
T Consensus       252 ~~l~~  256 (261)
T cd05034         252 EYLQS  256 (261)
T ss_pred             HHHHH
Confidence            99874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.3e-42  Score=330.86  Aligned_cols=259  Identities=20%  Similarity=0.317  Sum_probs=213.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCC-----ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESS-----ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-   83 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-   83 (426)
                      ...+..++|++.+.||+|+||.||++.....+     ..+|+|++....            .......+..|+.+++++ 
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~------------~~~~~~~~~~E~~~l~~l~   73 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA------------TEKDLSDLVSEMEMMKMIG   73 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC------------CHHHHHHHHHHHHHHHhhc
Confidence            45677789999999999999999999986443     689999884321            112345678899999999 


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHh--------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ--------------SEQMFSDDTIRFYAAELVLALEYLHNMGI  149 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~--------------~~~~l~~~~~~~~~~qil~aL~~LH~~gi  149 (426)
                      +||||+++++++..+..++++|||+++++|..++...              ....+++..+..++.||+.||+|||++||
T Consensus        74 ~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i  153 (293)
T cd05053          74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC  153 (293)
T ss_pred             CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            7999999999999999999999999999999998642              23468999999999999999999999999


Q ss_pred             cccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCC
Q 014344          150 VYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDP  229 (426)
Q Consensus       150 iHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (426)
                      +||||||+|||++.++.+||+|||++..+.....                                              
T Consensus       154 vH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------------  187 (293)
T cd05053         154 IHRDLAARNVLVTEDHVMKIADFGLARDIHHIDY----------------------------------------------  187 (293)
T ss_pred             cccccceeeEEEcCCCeEEeCccccccccccccc----------------------------------------------
Confidence            9999999999999999999999999886542110                                              


Q ss_pred             CCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCC
Q 014344          230 PSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGE  306 (426)
Q Consensus       230 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~  306 (426)
                              ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+..+....  ......
T Consensus       188 --------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  259 (293)
T cd05053         188 --------YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNC  259 (293)
T ss_pred             --------eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCC
Confidence                    000111124667999999999999999999999999999997 999999887776666554332  223355


Q ss_pred             CHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          307 PTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       307 ~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +..+.+|+.+||..||.+|||+.+++++
T Consensus       260 ~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         260 TQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            7889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.5e-42  Score=327.13  Aligned_cols=254  Identities=20%  Similarity=0.288  Sum_probs=210.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ++..+|++.++||+|+||.||+|...     .++..+|+|.+....             ......+..|+++++.++|||
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~   68 (280)
T cd05092           2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-------------ESARQDFQREAELLTVLQHQH   68 (280)
T ss_pred             CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-------------HHHHHHHHHHHHHHhcCCCCC
Confidence            46678999999999999999999753     356689999874321             123457888999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE-------------QMFSDDTIRFYAAELVLALEYLHNMGIVYRDL  154 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~-------------~~l~~~~~~~~~~qil~aL~~LH~~giiHrDl  154 (426)
                      |+++++++......+++|||+++++|.+++.....             ..+++..+..++.||+.||+|||++||+||||
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dl  148 (280)
T cd05092          69 IVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDL  148 (280)
T ss_pred             CceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence            99999999999999999999999999998875432             24889999999999999999999999999999


Q ss_pred             CCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          155 KPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSD  234 (426)
Q Consensus       155 Kp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (426)
                      ||+|||+++++.+||+|||++........                                                   
T Consensus       149 kp~nil~~~~~~~kL~dfg~~~~~~~~~~---------------------------------------------------  177 (280)
T cd05092         149 ATRNCLVGQGLVVKIGDFGMSRDIYSTDY---------------------------------------------------  177 (280)
T ss_pred             cHhhEEEcCCCCEEECCCCceeEcCCCce---------------------------------------------------
Confidence            99999999999999999999875532110                                                   


Q ss_pred             CCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHH
Q 014344          235 SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLR  311 (426)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~  311 (426)
                         ........+++.|+|||.+.+..++.++|||||||++|+|++ |.+||......+....+....  ......+..+.
T Consensus       178 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (280)
T cd05092         178 ---YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVY  254 (280)
T ss_pred             ---eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHH
Confidence               001122336788999999999999999999999999999998 999998877776666554432  22335678899


Q ss_pred             HHHHHHhccCCCCCCChHHHhc
Q 014344          312 NLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       312 ~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +||.+||+.||.+||++++|+.
T Consensus       255 ~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         255 AIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HHHHHHccCChhhCCCHHHHHH
Confidence            9999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2.2e-42  Score=323.65  Aligned_cols=251  Identities=21%  Similarity=0.323  Sum_probs=207.6

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+..++|+++++||+|+||.||+|... +++.||+|.+.....              ....+.+|+.+++.++||||+++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~--------------~~~~~~~E~~~l~~l~h~~i~~~   66 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM--------------SPEAFLAEANLMKQLQHPRLVRL   66 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC--------------cHHHHHHHHHHHHhcCCcCeeeE
Confidence            345567999999999999999999864 567899998843211              23467789999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++ ..+.+|++|||+.+++|.+++.......++...+..++.|++.||+|||+.|++||||||+||+++.++.++|+|
T Consensus        67 ~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~d  145 (260)
T cd05067          67 YAVV-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIAD  145 (260)
T ss_pred             EEEE-ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEcc
Confidence            9987 456789999999999999988766556689999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++........                                                       .......++..|+
T Consensus       146 fg~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~  170 (260)
T cd05067         146 FGLARLIEDNEY-------------------------------------------------------TAREGAKFPIKWT  170 (260)
T ss_pred             CcceeecCCCCc-------------------------------------------------------ccccCCccccccc
Confidence            999876531100                                                       0011223567899


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||++.+..++.++|+|||||++|+|++ |++||.+.+..+....+...  .+.....+..+.++|.+||..+|++||++
T Consensus       171 ~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05067         171 APEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTF  250 (260)
T ss_pred             CHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            9999998889999999999999999998 99999988776665554332  22333457889999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      ++++.
T Consensus       251 ~~l~~  255 (260)
T cd05067         251 EYLRS  255 (260)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=2.7e-42  Score=331.19  Aligned_cols=266  Identities=25%  Similarity=0.389  Sum_probs=207.3

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|++++.||.|+||.||+|.+..+++.+|||++......           ......+.+|+.+++.++||||+++++
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~   74 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK-----------DGFPITALREIKILKKLKHPNVVPLID   74 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC-----------CCcchhHHHHHHHHHhcCCCCccchhh
Confidence            368899999999999999999999999999999998543211           111234567999999999999999999


Q ss_pred             eeec--------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           94 VLST--------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        94 ~~~~--------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      ++..        ...+|+||||+. ++|...+... ...+++..++.++.||+.||+|||++||+||||||+|||+++++
T Consensus        75 ~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~  152 (311)
T cd07866          75 MAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQG  152 (311)
T ss_pred             heecccccccccCceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            8743        335799999996 5676665443 34599999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .++|+|||++............                                             ............+
T Consensus       153 ~~~l~dfg~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~  187 (311)
T cd07866         153 ILKIADFGLARPYDGPPPNPKG---------------------------------------------GGGGGTRKYTNLV  187 (311)
T ss_pred             CEEECcCccchhccCCCccccc---------------------------------------------CCcccccccccce
Confidence            9999999999765422110000                                             0000112234457


Q ss_pred             cCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CC-----------C--------
Q 014344          246 GTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PP-----------D--------  302 (426)
Q Consensus       246 gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~-----------~--------  302 (426)
                      |++.|+|||.+.+. .++.++|||||||++|+|++|++||.+.+.......+...   +.           .        
T Consensus       188 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (311)
T cd07866         188 VTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFT  267 (311)
T ss_pred             eccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCC
Confidence            89999999988764 5789999999999999999999999988776554443210   00           0        


Q ss_pred             ---------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          303 ---------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       303 ---------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                               .......+.+||.+||+.||.+|||+.+++.||||
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         268 NYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             CCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                     01223568899999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.5e-42  Score=338.22  Aligned_cols=252  Identities=27%  Similarity=0.431  Sum_probs=205.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|.+.+.||+|+||.||+|.+..+++.||+|++.+...           .......+..|+.+++.++||||+++++++
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   83 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-----------SEIFAKRAYRELTLLKHMQHENVIGLLDVF   83 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-----------cccchhHHHHHHHHHHhcCCCCccchhhee
Confidence            579999999999999999999999999999999854211           112334677899999999999999999998


Q ss_pred             ecCC------eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           96 STDK------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        96 ~~~~------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ....      .+|+|+||+. .+|..++    ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL  158 (342)
T cd07879          84 TSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKI  158 (342)
T ss_pred             cccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence            6543      4699999996 5666553    234899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.....                                                           ......||+.
T Consensus       159 ~dfg~~~~~~~-----------------------------------------------------------~~~~~~~~~~  179 (342)
T cd07879         159 LDFGLARHADA-----------------------------------------------------------EMTGYVVTRW  179 (342)
T ss_pred             eeCCCCcCCCC-----------------------------------------------------------CCCCceeeec
Confidence            99999864321                                                           1122357889


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----------------------CCC---
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----------------------PPD---  302 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-----------------------~~~---  302 (426)
                      |+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...                       .+.   
T Consensus       180 y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (342)
T cd07879         180 YRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPR  259 (342)
T ss_pred             ccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCccc
Confidence            999999876 45889999999999999999999999987755544333210                       000   


Q ss_pred             ------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          303 ------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       303 ------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                            ....+..+.+||.+||+.||.+||++++++.||||+.+.+
T Consensus       260 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         260 KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence                  1234567899999999999999999999999999987654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.3e-42  Score=334.31  Aligned_cols=258  Identities=19%  Similarity=0.308  Sum_probs=202.3

Q ss_pred             eeccc--CceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCe
Q 014344           23 ALGRG--AKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        23 ~LG~G--~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~  100 (426)
                      +||+|  ++|.||++++..+++.||||++.....           .......+..|+.+++.++||||++++++|..+..
T Consensus         5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~-----------~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~   73 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSC-----------SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSE   73 (314)
T ss_pred             hhhHhhcCCceEEEEEecCCCCEEEEEEEecccc-----------chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCe
Confidence            34443  556677777778999999999854311           12345678999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      .|++|||+++++|.+++.......+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||.+..+..
T Consensus        74 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~  153 (314)
T cd08216          74 LYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIK  153 (314)
T ss_pred             EEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecc
Confidence            99999999999999998876555699999999999999999999999999999999999999999999999998876532


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC--
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG--  258 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--  258 (426)
                      ......                                                 ..........++..|+|||++.+  
T Consensus       154 ~~~~~~-------------------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~  184 (314)
T cd08216         154 HGKRQR-------------------------------------------------VVHDFPKSSVKNLPWLSPEVLQQNL  184 (314)
T ss_pred             cccccc-------------------------------------------------ccccccccccccccccCHHHhcCCC
Confidence            110000                                                 00011223457888999999876  


Q ss_pred             CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-CCCCC----------------------------------
Q 014344          259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-RPPDL----------------------------------  303 (426)
Q Consensus       259 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-~~~~~----------------------------------  303 (426)
                      ..++.++|+||+||++|+|++|..||.............. ..+..                                  
T Consensus       185 ~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (314)
T cd08216         185 QGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYT  264 (314)
T ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchh
Confidence            4588899999999999999999999987655433222111 10000                                  


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ...+..+.+||++||++||++|||++++|+||||+.+
T Consensus       265 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         265 RTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             hHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence            0012457899999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=2.5e-42  Score=324.72  Aligned_cols=255  Identities=24%  Similarity=0.352  Sum_probs=209.9

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCc---eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSE---SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ++..+|++.+.||+|+||.||+|.+..++.   .+|+|.+.....            ......+..|+.+++.++||||+
T Consensus         1 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~   68 (267)
T cd05066           1 IDASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT------------EKQRRDFLSEASIMGQFDHPNII   68 (267)
T ss_pred             CCHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC------------HHHHHHHHHHHHHHHhCCCCCcc
Confidence            345789999999999999999999875544   799998743211            12345778899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++..++.+|+||||++|++|.+++.... ..++...+..++.|++.||.|||++|++||||||+|||++.++.++|
T Consensus        69 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l  147 (267)
T cd05066          69 HLEGVVTKSKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKV  147 (267)
T ss_pred             eEEEEEecCCccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEe
Confidence            99999999999999999999999999987653 45899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+......                                                     ........++..
T Consensus       148 ~dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  174 (267)
T cd05066         148 SDFGLSRVLEDDPEA-----------------------------------------------------AYTTRGGKIPIR  174 (267)
T ss_pred             CCCCcccccccccce-----------------------------------------------------eeecCCCcccee
Confidence            999998765321100                                                     000111224567


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||.+.+..++.++|+|||||++|++++ |..||...+..+....+...  .+.....+..+.+++.+||+.+|.+||
T Consensus       175 y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (267)
T cd05066         175 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERP  254 (267)
T ss_pred             ecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCC
Confidence            999999999889999999999999999886 99999887766665555432  233445678899999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      ++.++++
T Consensus       255 ~~~~i~~  261 (267)
T cd05066         255 KFEQIVS  261 (267)
T ss_pred             CHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.1e-42  Score=337.53  Aligned_cols=250  Identities=28%  Similarity=0.448  Sum_probs=204.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|.+..+++.||+|++.+....           ......+.+|+.++++++||||+++++++
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~   85 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-----------IIHAKRTYRELRLLKHMKHENVIGLLDVF   85 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-----------hHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence            6799999999999999999999999999999998543211           11234577899999999999999999988


Q ss_pred             ecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           96 STD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        96 ~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ...      ...|++++++ |++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||
T Consensus        86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl  161 (345)
T cd07877          86 TPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI  161 (345)
T ss_pred             eecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEE
Confidence            543      3578888887 7899887653   34899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.....                                                           ......||+.
T Consensus       162 ~dfg~~~~~~~-----------------------------------------------------------~~~~~~~~~~  182 (345)
T cd07877         162 LDFGLARHTDD-----------------------------------------------------------EMTGYVATRW  182 (345)
T ss_pred             ecccccccccc-----------------------------------------------------------cccccccCCC
Confidence            99999865321                                                           1122357889


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--------------------------CCC-
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--------------------------RPP-  301 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~--------------------------~~~-  301 (426)
                      |+|||++.+ ..++.++|||||||++|+|++|++||...+....+..+..                          ..+ 
T Consensus       183 y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (345)
T cd07877         183 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK  262 (345)
T ss_pred             ccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCC
Confidence            999999876 5678899999999999999999999987665443332211                          000 


Q ss_pred             -----CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          302 -----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       302 -----~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                           .....+..+.+||.+||+.||.+|+++.+++.||||+.
T Consensus       263 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         263 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             cchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence                 01134677899999999999999999999999999985

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-44  Score=348.32  Aligned_cols=245  Identities=29%  Similarity=0.412  Sum_probs=207.6

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      ..+.|++...+|.|+|++|-.+.+..+++.+|+|++.+..                 .....|+.++... +||||++++
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-----------------~~~~~e~~~~~~~~~h~niv~~~  382 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-----------------DDNQDEIPISLLVRDHPNIVKSH  382 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc-----------------cccccccchhhhhcCCCcceeec
Confidence            3667999999999999999999999999999999995541                 1122366566555 699999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee-ccCCcEEEec
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVD  171 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl-~~~g~ikL~D  171 (426)
                      +++.+...+|+|||++.|+.|.+-+....   .....+..|++||+.|+.|||++|+|||||||+|||+ ++.|+++|+|
T Consensus       383 ~v~~~~~~~~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrlty  459 (612)
T KOG0603|consen  383 DVYEDGKEIYLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTY  459 (612)
T ss_pred             ceecCCceeeeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEE
Confidence            99999999999999999998877655433   3337888899999999999999999999999999999 6999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||.++.....                                                           ..+.+-|..|.
T Consensus       460 FG~a~~~~~~-----------------------------------------------------------~~tp~~t~~y~  480 (612)
T KOG0603|consen  460 FGFWSELERS-----------------------------------------------------------CDTPALTLQYV  480 (612)
T ss_pred             echhhhCchh-----------------------------------------------------------hcccchhhccc
Confidence            9999876431                                                           22234678899


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      |||++...+|+.++||||||++||+||+|+.||...........-+..++.....+..+++||++||+.||.+|+++.++
T Consensus       481 APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i  560 (612)
T KOG0603|consen  481 APEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEI  560 (612)
T ss_pred             ChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChhhh
Confidence            99999999999999999999999999999999987666544444444444446678999999999999999999999999


Q ss_pred             hcCCCc
Q 014344          332 KGHEFF  337 (426)
Q Consensus       332 l~hp~f  337 (426)
                      +.||||
T Consensus       561 ~~h~w~  566 (612)
T KOG0603|consen  561 GAHPWF  566 (612)
T ss_pred             ccCcch
Confidence            999999

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.8e-44  Score=348.02  Aligned_cols=251  Identities=23%  Similarity=0.410  Sum_probs=211.5

Q ss_pred             EEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecC
Q 014344           19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTD   98 (426)
Q Consensus        19 ~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~   98 (426)
                      +...+||+|+|-+||+|.|..+|-.||---+....+.         ..+....++..|+.+|+.|+||||++++++|.+.
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~---------q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~  113 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT---------QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT  113 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhh---------cChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence            5668899999999999999999988886555333322         2345678999999999999999999999999765


Q ss_pred             C--eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--CCcccCCCCCCeeecc-CCcEEEeccc
Q 014344           99 K--FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM--GIVYRDLKPENIMIQE-NGHIMLVDFD  173 (426)
Q Consensus        99 ~--~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~--giiHrDlKp~NiLl~~-~g~ikL~DFg  173 (426)
                      .  ++.+|+|++..|+|..|+++.+.  ++...++.|++||+.||.|||++  -|||||||.+||+|+. .|.|||+|+|
T Consensus       114 ~n~~in~iTEL~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLG  191 (632)
T KOG0584|consen  114 DNKTINFITELFTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLG  191 (632)
T ss_pred             CCceeeeeeecccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchh
Confidence            5  48999999999999999887754  89999999999999999999998  5999999999999985 5899999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ||+.....                                                          ...+.+|||.||||
T Consensus       192 LAtl~r~s----------------------------------------------------------~aksvIGTPEFMAP  213 (632)
T KOG0584|consen  192 LATLLRKS----------------------------------------------------------HAKSVIGTPEFMAP  213 (632)
T ss_pred             HHHHhhcc----------------------------------------------------------ccceeccCccccCh
Confidence            99876422                                                          23456899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCC-CC-CCC-CCHHHHHHHHHHhccCCCCCCChH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS-RKETFYRILCRP-PD-LVG-EPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~-~~-~~~-~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      |++. ..|+..+||||||+.+.||+|+.+||.... ..++|.++.... |. +-. ..+++++||.+||.. .+.|+|+.
T Consensus       214 EmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~  291 (632)
T KOG0584|consen  214 EMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAK  291 (632)
T ss_pred             HHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHH
Confidence            9998 789999999999999999999999998755 455555655332 11 111 257799999999999 99999999


Q ss_pred             HHhcCCCcCCC
Q 014344          330 EIKGHEFFKGV  340 (426)
Q Consensus       330 eil~hp~f~~~  340 (426)
                      |+|.||||..-
T Consensus       292 eLL~d~Ff~~d  302 (632)
T KOG0584|consen  292 ELLKDPFFDED  302 (632)
T ss_pred             HHhhChhhccc
Confidence            99999999863

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-42  Score=318.46  Aligned_cols=252  Identities=29%  Similarity=0.504  Sum_probs=215.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|++|.||++.+..+++.||+|.+......           ......+..|++++++++|||++++++++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-----------EEALKSIMQEIDLLKNLKHPNIVKYIGSIE   69 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-----------HHHHHHHHHHHHHHHhCCCCCccEEEEEEE
Confidence            589999999999999999999999999999998554321           134567889999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ++...+++|||+.+++|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.
T Consensus        70 ~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~  147 (254)
T cd06627          70 TSDSLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVAT  147 (254)
T ss_pred             eCCEEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccce
Confidence            999999999999999999988765  459999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .......                                                        ......|+..|+|||.+
T Consensus       148 ~~~~~~~--------------------------------------------------------~~~~~~~~~~y~~pe~~  171 (254)
T cd06627         148 KLNDVSK--------------------------------------------------------DDASVVGTPYWMAPEVI  171 (254)
T ss_pred             ecCCCcc--------------------------------------------------------cccccccchhhcCHhhh
Confidence            7642210                                                        01233578899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+..++.++|+||+|+++|+|++|+.||...+............  ......+..+.++|.+||..+|++|||+.+++.|
T Consensus       172 ~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         172 EMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             cCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            88888999999999999999999999998777655554443222  2223456889999999999999999999999999


Q ss_pred             CCc
Q 014344          335 EFF  337 (426)
Q Consensus       335 p~f  337 (426)
                      |||
T Consensus       252 ~~~  254 (254)
T cd06627         252 PWI  254 (254)
T ss_pred             CCC
Confidence            997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=4.9e-42  Score=324.76  Aligned_cols=255  Identities=22%  Similarity=0.301  Sum_probs=207.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCc----eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSE----SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      +.+...+|++++.||+|+||+||+|....+++    .||+|++....            .......+..|+.+++.+.||
T Consensus         2 ~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~------------~~~~~~~~~~e~~~l~~~~~~   69 (279)
T cd05109           2 RILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT------------SPKANKEILDEAYVMAGVGSP   69 (279)
T ss_pred             cccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC------------CHHHHHHHHHHHHHHHhcCCC
Confidence            35677889999999999999999999877776    48999874321            122345678899999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++.. ...++++||+++|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.
T Consensus        70 ~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~  147 (279)
T cd05109          70 YVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNH  147 (279)
T ss_pred             CCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCc
Confidence            99999999865 45789999999999999876543 45899999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||+++.+......                                                      .......+
T Consensus       148 ~kL~dfG~~~~~~~~~~~------------------------------------------------------~~~~~~~~  173 (279)
T cd05109         148 VKITDFGLARLLDIDETE------------------------------------------------------YHADGGKV  173 (279)
T ss_pred             EEECCCCceeecccccce------------------------------------------------------eecCCCcc
Confidence            999999998765321100                                                      00111125


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      ++.|+|||.+.+..++.++|||||||++|||++ |..||...........+..  ..+.....+..+.++|.+||..||+
T Consensus       174 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  253 (279)
T cd05109         174 PIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSE  253 (279)
T ss_pred             chhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChh
Confidence            678999999999999999999999999999998 9999987766554443332  2233345678899999999999999


Q ss_pred             CCCChHHHhc
Q 014344          324 KRIGVEEIKG  333 (426)
Q Consensus       324 ~R~s~~eil~  333 (426)
                      +||++.+++.
T Consensus       254 ~Rp~~~~l~~  263 (279)
T cd05109         254 CRPRFRELVD  263 (279)
T ss_pred             hCcCHHHHHH
Confidence            9999999985

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-42  Score=327.00  Aligned_cols=251  Identities=26%  Similarity=0.399  Sum_probs=206.1

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc---CCCCcceeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV---EHPLLPRLRGV   94 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l~~~   94 (426)
                      |++.+.||+|+||.||+|++..+++.||+|++.....           .......+..|+.+++++   +||||++++++
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~   69 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-----------EEGIPLSTLREIALLKQLESFEHPNIVRLLDV   69 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-----------cchhhhhHHHHHHHHHHhhccCCCCcceEEEE
Confidence            7899999999999999999998999999999853321           111223455677777666   59999999999


Q ss_pred             eecCCe-----EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           95 LSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        95 ~~~~~~-----~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +.....     ++++|||+. ++|.+++.......+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|
T Consensus        70 ~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l  148 (287)
T cd07838          70 CHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKI  148 (287)
T ss_pred             EeeccCCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEE
Confidence            988776     999999997 58888877654446899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+....                                                         ......+++.
T Consensus       149 ~dfg~~~~~~~~~---------------------------------------------------------~~~~~~~~~~  171 (287)
T cd07838         149 ADFGLARIYSFEM---------------------------------------------------------ALTSVVVTLW  171 (287)
T ss_pred             eccCcceeccCCc---------------------------------------------------------cccccccccc
Confidence            9999987653110                                                         1112347889


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---------C------------------
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---------D------------------  302 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---------~------------------  302 (426)
                      |+|||++.+..++.++|+|||||++|+|++|.+||.+.+..+.+.++.....         .                  
T Consensus       172 ~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (287)
T cd07838         172 YRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKS  251 (287)
T ss_pred             ccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhh
Confidence            9999999999999999999999999999999999999887776665542100         0                  


Q ss_pred             -CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          303 -LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       303 -~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                       ....+..+.++|.+||+.||.+||++++++.||||
T Consensus       252 ~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         252 FVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             hhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence             01124567899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=4e-42  Score=328.57  Aligned_cols=251  Identities=21%  Similarity=0.294  Sum_probs=206.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCc--eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCccee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSE--SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRL   91 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~--~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l   91 (426)
                      .++|++.+.||+|+||.||+|.+..++.  .+|+|.+....            .....+.+..|+.++.++ +||||+++
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~------------~~~~~~~~~~E~~~l~~l~~hp~iv~~   68 (297)
T cd05089           1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA------------SENDHRDFAGELEVLCKLGHHPNIINL   68 (297)
T ss_pred             CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC------------CHHHHHHHHHHHHHHHhhcCCCchhhe
Confidence            3679999999999999999999877765  46888763211            112345678899999999 69999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCC
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPE  157 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~  157 (426)
                      ++++.....+|+||||+++++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+
T Consensus        69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~  148 (297)
T cd05089          69 LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAAR  148 (297)
T ss_pred             EEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcc
Confidence            999999999999999999999999886532              124888999999999999999999999999999999


Q ss_pred             CeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          158 NIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDS  237 (426)
Q Consensus       158 NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (426)
                      |||++.++.+||+|||++.......                                                       
T Consensus       149 Nill~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------------  173 (297)
T cd05089         149 NVLVGENLASKIADFGLSRGEEVYV-------------------------------------------------------  173 (297)
T ss_pred             eEEECCCCeEEECCcCCCcccccee-------------------------------------------------------
Confidence            9999999999999999875321100                                                       


Q ss_pred             CCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHH
Q 014344          238 SEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLI  314 (426)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li  314 (426)
                        .......+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+....  +.....+..+.+||
T Consensus       174 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  251 (297)
T cd05089         174 --KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELM  251 (297)
T ss_pred             --ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence              0001123456999999999899999999999999999997 999999988877776665432  22334678899999


Q ss_pred             HHHhccCCCCCCChHHHhcC
Q 014344          315 RRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+||..+|.+|||++++++.
T Consensus       252 ~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         252 RQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999765

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=3.1e-42  Score=330.18  Aligned_cols=258  Identities=19%  Similarity=0.332  Sum_probs=212.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-   83 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-   83 (426)
                      .+++..++|++.+.||+|+||.||+|.+.     .++..+|+|++.+..            .......+..|+.+++++ 
T Consensus        29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~   96 (302)
T cd05055          29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA------------HSSEREALMSELKIMSHLG   96 (302)
T ss_pred             cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC------------ChHHHHHHHHHHHHHHhcc
Confidence            34567778999999999999999999863     345689999874321            112345788899999999 


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      +||||+++++++...+.+|+||||+.+++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus        97 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~  176 (302)
T cd05055          97 NHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH  176 (302)
T ss_pred             CCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC
Confidence            79999999999999999999999999999999987655445899999999999999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++.++|+|||++..+......                                                      .....
T Consensus       177 ~~~~~l~dfg~~~~~~~~~~~------------------------------------------------------~~~~~  202 (302)
T cd05055         177 GKIVKICDFGLARDIMNDSNY------------------------------------------------------VVKGN  202 (302)
T ss_pred             CCeEEECCCcccccccCCCce------------------------------------------------------eecCC
Confidence            999999999998765321100                                                      00112


Q ss_pred             cccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHhc
Q 014344          244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP---PDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~li~~~L~  319 (426)
                      ..+++.|+|||.+.+..++.++||||+||++|+|++ |..||......+.+.+.....   ......+..+.+||.+||.
T Consensus       203 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  282 (302)
T cd05055         203 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWD  282 (302)
T ss_pred             CCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcC
Confidence            246788999999999999999999999999999998 999998877666555544322   2223457889999999999


Q ss_pred             cCCCCCCChHHHhc
Q 014344          320 KDPTKRIGVEEIKG  333 (426)
Q Consensus       320 ~dP~~R~s~~eil~  333 (426)
                      ++|++|||+.+++.
T Consensus       283 ~~p~~Rpt~~ell~  296 (302)
T cd05055         283 ADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCchhCcCHHHHHH
Confidence            99999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=2.8e-42  Score=328.99  Aligned_cols=255  Identities=22%  Similarity=0.288  Sum_probs=208.6

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCC----------------ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHH
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESS----------------ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE   76 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~----------------~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   76 (426)
                      +...+|++++.||+|+||.||+|.+..++                ..||+|++.....            ......+..|
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~------------~~~~~~~~~e   69 (296)
T cd05051           2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS------------DNAREDFLKE   69 (296)
T ss_pred             CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC------------HHHHHHHHHH
Confidence            45678999999999999999999876543                4589998854321            1245678889


Q ss_pred             HHHHHhcCCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           77 QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---------EQMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        77 ~~il~~l~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~---------~~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      +++++.++||||+++++++..+...+++|||+.+++|..++....         ...+++..++.++.|++.||.|||++
T Consensus        70 ~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~  149 (296)
T cd05051          70 VKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL  149 (296)
T ss_pred             HHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999887543         12589999999999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      ||+||||||+||+++.++.++|+|||++........                                            
T Consensus       150 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------  185 (296)
T cd05051         150 NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY--------------------------------------------  185 (296)
T ss_pred             CccccccchhceeecCCCceEEccccceeecccCcc--------------------------------------------
Confidence            999999999999999999999999999875432110                                            


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhcC------
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY--GATPFRGSSRKETFYRILCR------  299 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~~~~i~~~------  299 (426)
                                ........+|+.|+|||.+.+..++.++|||||||++|+|++  |..||...+....+..+...      
T Consensus       186 ----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  255 (296)
T cd05051         186 ----------YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGR  255 (296)
T ss_pred             ----------eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccc
Confidence                      001123346788999999998889999999999999999998  78899887766655544321      


Q ss_pred             ---CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          300 ---PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       300 ---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                         .+.....+.++.+||.+||+.||++|||+.+|++
T Consensus       256 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         256 QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence               1122344678999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1.6e-42  Score=325.55  Aligned_cols=253  Identities=27%  Similarity=0.392  Sum_probs=208.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++.+.||+|++|.||+|++..+++.+|||.+.+.....          ......+.+|+.+++.++||||++++++
T Consensus         1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~h~~i~~~~~~   70 (267)
T cd08229           1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMD----------AKARADCIKEIDLLKQLNHPNVIKYYAS   70 (267)
T ss_pred             CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhh----------HHHHHHHHHHHHHHHHccCCchhhhhhe
Confidence            367999999999999999999999999999999885432111          1234577889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +..++..+++|||++|++|.+++...  ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+||
T Consensus        71 ~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df  150 (267)
T cd08229          71 FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDL  150 (267)
T ss_pred             eEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcc
Confidence            99999999999999999999987642  2345899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+....                                                        .......|++.|+|
T Consensus       151 g~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~a  174 (267)
T cd08229         151 GLGRFFSSKT--------------------------------------------------------TAAHSLVGTPYYMS  174 (267)
T ss_pred             hhhhccccCC--------------------------------------------------------cccccccCCcCccC
Confidence            9887653211                                                        01123358889999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcC--CC-CCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR--KETFYRILCR--PP-DLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~--~~-~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||.+.+..++.++|+|||||++|+|++|..||.+...  ......+...  ++ .....+..+.++|.+||..||++|||
T Consensus       175 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  254 (267)
T cd08229         175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPD  254 (267)
T ss_pred             HHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCC
Confidence            9999999999999999999999999999999976543  2333333221  11 11235678999999999999999999


Q ss_pred             hHHHhc
Q 014344          328 VEEIKG  333 (426)
Q Consensus       328 ~~eil~  333 (426)
                      +.+|+.
T Consensus       255 ~~~i~~  260 (267)
T cd08229         255 ITYVYD  260 (267)
T ss_pred             HHHHHH
Confidence            998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=4.3e-42  Score=329.91  Aligned_cols=261  Identities=19%  Similarity=0.297  Sum_probs=211.8

Q ss_pred             CCCCCCCCCCcEEEeeecccCceEEEEEEEcC-------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHH
Q 014344            8 RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVE-------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL   80 (426)
Q Consensus         8 ~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il   80 (426)
                      .+.+++..++|.+++.||+|+||.||+|++..       +...+|+|++....            .......+..|+.++
T Consensus        10 ~~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~------------~~~~~~~~~~e~~~l   77 (307)
T cd05098          10 DPRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA------------TEKDLSDLISEMEMM   77 (307)
T ss_pred             CCcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC------------ChHHHHHHHHHHHHH
Confidence            44566777899999999999999999998753       23469999985431            112345677899999


Q ss_pred             Hhc-CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHH
Q 014344           81 RNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--------------QMFSDDTIRFYAAELVLALEYLH  145 (426)
Q Consensus        81 ~~l-~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~--------------~~l~~~~~~~~~~qil~aL~~LH  145 (426)
                      +.+ +||||+++++++......|+||||+.+++|.+++.....              ..++...+..++.||+.||+|||
T Consensus        78 ~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH  157 (307)
T cd05098          78 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA  157 (307)
T ss_pred             HHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            999 799999999999999999999999999999999876421              24888999999999999999999


Q ss_pred             HCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCC
Q 014344          146 NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRI  225 (426)
Q Consensus       146 ~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (426)
                      ++|++||||||+|||++.++.+||+|||++........                                          
T Consensus       158 ~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~------------------------------------------  195 (307)
T cd05098         158 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------------------------------------  195 (307)
T ss_pred             HCCcccccccHHheEEcCCCcEEECCCcccccccccch------------------------------------------
Confidence            99999999999999999999999999999875531100                                          


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CC
Q 014344          226 GPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PD  302 (426)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~  302 (426)
                                  ........+++.|+|||++.+..++.++|+|||||++|+|++ |..||.+....+.+..+....  ..
T Consensus       196 ------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  263 (307)
T cd05098         196 ------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK  263 (307)
T ss_pred             ------------hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCC
Confidence                        000111124568999999999889999999999999999998 899998877766655554332  22


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ....+..+.+||.+||..+|.+||++.+++++
T Consensus       264 ~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         264 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             CCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            33457889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=1.8e-42  Score=336.66  Aligned_cols=280  Identities=24%  Similarity=0.332  Sum_probs=212.1

Q ss_pred             CCcEE-EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcc-cCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           16 SCLRI-VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELT-NNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        16 ~~y~i-~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~-~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ++|.. .+.||.|+||+||+|.+..+++.||||++............. ..........+.+|+.+++.++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            34764 577999999999999999999999999986543221100000 0001111235778999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++..+...|+||||+. ++|.+++...  ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg  164 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG  164 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence            9999999999999997 6898887653  348999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.............                                  ..        .............+++.|+||
T Consensus       165 ~~~~~~~~~~~~~~~----------------------------------~~--------~~~~~~~~~~~~~~~~~y~aP  202 (335)
T PTZ00024        165 LARRYGYPPYSDTLS----------------------------------KD--------ETMQRREEMTSKVVTLWYRAP  202 (335)
T ss_pred             ceeeccccccccccc----------------------------------cc--------ccccccccccccccccCCCCC
Confidence            987654211000000                                  00        000001112233578899999


Q ss_pred             hhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC--------------------------C
Q 014344          254 EIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD--------------------------L  303 (426)
Q Consensus       254 E~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~--------------------------~  303 (426)
                      |.+.+. .++.++|+|||||++|+|++|.+||.+.+..+.+..+..   .+..                          .
T Consensus       203 E~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (335)
T PTZ00024        203 ELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIF  282 (335)
T ss_pred             hhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhC
Confidence            998764 468999999999999999999999998887666554431   1100                          1


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ...+..+.++|.+||..+|++|||++++|.||||+..
T Consensus       283 ~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        283 PNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             cCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence            1235678999999999999999999999999999853

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1e-42  Score=337.56  Aligned_cols=257  Identities=26%  Similarity=0.419  Sum_probs=213.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||.|++|.||+|++..+++.||||++.+...           .....+.+..|+.+++.++||||+++++++.
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-----------DLIDAKRILREIKLLRHLRHENIIGLLDILR   69 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-----------cchhhhhHHHHHHHHHhcCCcchhhhhhhhc
Confidence            59999999999999999999999999999999854211           1234467888999999999999999999997


Q ss_pred             cCC-----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           97 TDK-----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        97 ~~~-----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ...     .+|+||||+. ++|..++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|
T Consensus        70 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~d  146 (330)
T cd07834          70 PPSPEDFNDVYIVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICD  146 (330)
T ss_pred             ccCcccccceEEEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcc
Confidence            775     8999999997 58888776433  599999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.........                                                     ........+|+.|+
T Consensus       147 fg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~  173 (330)
T cd07834         147 FGLARGVDPDEDE-----------------------------------------------------KGFLTEYVVTRWYR  173 (330)
T ss_pred             cCceEeecccccc-----------------------------------------------------cccccccccccCcC
Confidence            9998865422100                                                     01122345889999


Q ss_pred             cchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---C--------------------------
Q 014344          252 APEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---P--------------------------  301 (426)
Q Consensus       252 aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~---~--------------------------  301 (426)
                      |||++.+. .++.++|+|||||++|+|++|++||.+.+..+.+..+....   +                          
T Consensus       174 aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (330)
T cd07834         174 APELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKP  253 (330)
T ss_pred             CceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcch
Confidence            99999887 78999999999999999999999999888766555443210   0                          


Q ss_pred             ---CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 ---DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 ---~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                         .....+..+.+||.+||+++|.+||++++++.||||+++
T Consensus       254 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         254 LSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             hHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence               012246778999999999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-45  Score=378.91  Aligned_cols=257  Identities=32%  Similarity=0.484  Sum_probs=217.4

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +++-...||.|.||.||-|....+|+..|+|-+......           ....+.+..|..+|..++|||+|+++++-.
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-----------~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv 1304 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-----------HKTFKLIAEEMKVLEGLNHPNLVRYYGVEV 1304 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-----------cccCcchHHHHHHHHhccCccccccCceee
Confidence            467788999999999999999999999999987443322           123456788999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ..+.++|.||||.||+|.++.+..+  -.++...+.|..|++.||.|||++|||||||||+||+|+.+|.||++|||.|.
T Consensus      1305 HRekv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1305 HREKVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAV 1382 (1509)
T ss_pred             cHHHHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeeccccee
Confidence            9999999999999999999977543  37889999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .+.......                                                    ....+.++|||.|||||++
T Consensus      1383 ki~~~~~~~----------------------------------------------------~~el~~~~GT~~YMAPEvi 1410 (1509)
T KOG4645|consen 1383 KIKNNAQTM----------------------------------------------------PGELQSMMGTPMYMAPEVI 1410 (1509)
T ss_pred             EecCchhcC----------------------------------------------------CHHHHhhcCCchhcCchhh
Confidence            876432111                                                    1234577899999999999


Q ss_pred             cC---CCCChhhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHh--cCCCCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          257 EG---KGHDFAVDWWSLGVVLHEMLYGATPFRGSS-RKETFYRIL--CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       257 ~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      .+   .++.-+.|||||||++.||+||+.||...+ .....+++-  ..|..+...+++.+|||.+||+.||.+|.++.|
T Consensus      1411 t~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~q 1490 (1509)
T KOG4645|consen 1411 TGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQ 1490 (1509)
T ss_pred             cccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHH
Confidence            76   457889999999999999999999998754 445555543  233334456888999999999999999999999


Q ss_pred             HhcCCCcC
Q 014344          331 IKGHEFFK  338 (426)
Q Consensus       331 il~hp~f~  338 (426)
                      ||.|.|=+
T Consensus      1491 lle~~f~~ 1498 (1509)
T KOG4645|consen 1491 LLEHAFGK 1498 (1509)
T ss_pred             HHHhhccc
Confidence            99998864

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=4e-42  Score=323.83  Aligned_cols=252  Identities=21%  Similarity=0.282  Sum_probs=203.2

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCc--eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSE--SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~--~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      |.+.+.||+|+||.||+|+...++.  .+|+|.+.....           .......+..|+.+++.++||||+++++.+
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   69 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-----------TRSEMEDFLSEAVCMKEFDHPNVMRLIGVC   69 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-----------CHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            4578899999999999999887775  699998854321           122456788899999999999999999876


Q ss_pred             ec------CCeEEEEEeccCCCChHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           96 ST------DKFVGYAIDYCPGRDLHSLRKQQ----SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        96 ~~------~~~~~lV~Ey~~gg~L~~l~~~~----~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      ..      ....+++|||+.+|+|..++...    ....+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus        70 ~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  149 (272)
T cd05075          70 LQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM  149 (272)
T ss_pred             ccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC
Confidence            32      23578999999999999876422    223488999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .++|+|||++..+......                                                      .......
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~------------------------------------------------------~~~~~~~  175 (272)
T cd05075         150 NVCVADFGLSKKIYNGDYY------------------------------------------------------RQGRIAK  175 (272)
T ss_pred             CEEECCCCcccccCcccce------------------------------------------------------ecCCccc
Confidence            9999999998865321100                                                      0011223


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      +++.|+|||.+.+..++.++|||||||++|+|++ |+.||.+....+.+..+....  +.....+..+.++|.+||+.||
T Consensus       176 ~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  255 (272)
T cd05075         176 MPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNP  255 (272)
T ss_pred             CCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            6778999999999999999999999999999998 899998887776666555332  2334567889999999999999


Q ss_pred             CCCCChHHHhcC
Q 014344          323 TKRIGVEEIKGH  334 (426)
Q Consensus       323 ~~R~s~~eil~h  334 (426)
                      .+|||+.+|+++
T Consensus       256 ~~Rps~~~l~~~  267 (272)
T cd05075         256 KDRPSFETLRCE  267 (272)
T ss_pred             ccCcCHHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=6.5e-42  Score=319.00  Aligned_cols=252  Identities=26%  Similarity=0.414  Sum_probs=214.7

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||.|+||.||++.+..+++.+|+|++.+.....           .....+..|+.+++.++||||+++++++.
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-----------KEREDAVNEIRILASVNHPNIISYKEAFL   69 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-----------HHHHHHHHHHHHHHhCCCCCchhhhhhhc
Confidence            5899999999999999999999999999999986543221           23456677999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      .....|+||||+++++|.+++...  ....+++..+..++.|++.||.|||+.|++||||+|+||+++.++.+||+|||+
T Consensus        70 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~  149 (256)
T cd08530          70 DGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGI  149 (256)
T ss_pred             cCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccc
Confidence            999999999999999999987652  234589999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +......                                                          ......|++.|+|||
T Consensus       150 ~~~~~~~----------------------------------------------------------~~~~~~~~~~~~~Pe  171 (256)
T cd08530         150 SKVLKKN----------------------------------------------------------MAKTQIGTPHYMAPE  171 (256)
T ss_pred             hhhhccC----------------------------------------------------------CcccccCCccccCHH
Confidence            8765321                                                          011124788999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      .+.+..++.++|+||||+++|+|++|+.||...+..+....+....  +.....+..++++|.+||..+|.+||++.+++
T Consensus       172 ~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l  251 (256)
T cd08530         172 VWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKIL  251 (256)
T ss_pred             HHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            9999999999999999999999999999999888766555544322  22234578899999999999999999999999


Q ss_pred             cCCCc
Q 014344          333 GHEFF  337 (426)
Q Consensus       333 ~hp~f  337 (426)
                      +||++
T Consensus       252 ~~p~~  256 (256)
T cd08530         252 ASPAV  256 (256)
T ss_pred             cCCCC
Confidence            99974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-42  Score=324.42  Aligned_cols=252  Identities=21%  Similarity=0.295  Sum_probs=204.5

Q ss_pred             cEEEeeecccCceEEEEEEEcCC---CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVES---SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      |++++.||+|+||.||+|....+   +..||+|.+.....           .......+..|+.+++.++||||++++++
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   69 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-----------TYSEIEEFLSEAACMKDFDHPNVMKLIGV   69 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-----------CHHHHHHHHHHHHHHHhCCCCCeeeEEee
Confidence            67899999999999999997653   47899999843211           12234578889999999999999999998


Q ss_pred             eecCCe------EEEEEeccCCCChHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           95 LSTDKF------VGYAIDYCPGRDLHSLRKQQS----EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        95 ~~~~~~------~~lV~Ey~~gg~L~~l~~~~~----~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      +.....      .+++|||+++++|..++....    ...+++..+..++.|++.||.|||+.||+||||||+||+++++
T Consensus        70 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~  149 (273)
T cd05035          70 CFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED  149 (273)
T ss_pred             eccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC
Confidence            755443      899999999999998875432    2358999999999999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||+++.+.....                                                      .......
T Consensus       150 ~~~kl~dfg~~~~~~~~~~------------------------------------------------------~~~~~~~  175 (273)
T cd05035         150 MTVCVADFGLSKKIYSGDY------------------------------------------------------YRQGRIA  175 (273)
T ss_pred             CeEEECCccceeecccccc------------------------------------------------------ccccccc
Confidence            9999999999876532110                                                      0001112


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccC
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~d  321 (426)
                      .++..|+|||.+.+..++.++|||||||++|||++ |.+||.+....+.+..+....  ......+..+.++|.+||+.|
T Consensus       176 ~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  255 (273)
T cd05035         176 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRAD  255 (273)
T ss_pred             cCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            24678999999998889999999999999999998 999999888777666555322  223355788999999999999


Q ss_pred             CCCCCChHHHhcC
Q 014344          322 PTKRIGVEEIKGH  334 (426)
Q Consensus       322 P~~R~s~~eil~h  334 (426)
                      |.+|||+.|++++
T Consensus       256 p~~Rp~~~e~~~~  268 (273)
T cd05035         256 PKDRPTFTKLREV  268 (273)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=5.9e-42  Score=320.87  Aligned_cols=251  Identities=22%  Similarity=0.312  Sum_probs=207.1

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ++..++|++...||+|++|.||+|.+..+ ..+|+|.+....              .....+.+|+.+++.++|||++++
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~--------------~~~~~~~~E~~~l~~l~h~~i~~~   66 (260)
T cd05069           2 EIPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT--------------MMPEAFLQEAQIMKKLRHDKLVPL   66 (260)
T ss_pred             cCChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC--------------ccHHHHHHHHHHHHhCCCCCeeeE
Confidence            34567799999999999999999988655 469999874321              122457789999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++. ....|+||||+.+++|.+++.......++...+..++.|++.||.|||+.||+||||||+||+++.++.++|+|
T Consensus        67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~d  145 (260)
T cd05069          67 YAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIAD  145 (260)
T ss_pred             EEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECC
Confidence            99875 45689999999999999998765555689999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++........                                                       .......++..|+
T Consensus       146 fg~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~  170 (260)
T cd05069         146 FGLARLIEDNEY-------------------------------------------------------TARQGAKFPIKWT  170 (260)
T ss_pred             CccceEccCCcc-------------------------------------------------------cccCCCccchhhC
Confidence            999876532110                                                       0011123567899


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||.+.+..++.++|+|||||++|+|++ |..||.+....+....+....  +.....+..+.++|.+||.+||.+||++
T Consensus       171 ~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05069         171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTF  250 (260)
T ss_pred             CHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCH
Confidence            9999998889999999999999999999 999999888777666665432  2233567889999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      +++++
T Consensus       251 ~~i~~  255 (260)
T cd05069         251 EYIQS  255 (260)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=5.1e-42  Score=326.84  Aligned_cols=254  Identities=20%  Similarity=0.289  Sum_probs=209.5

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ++..+|.+.+.||+|+||.||+|.+.     .++..+|+|.+.....             ...+.+.+|+.+++.++|||
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~   68 (291)
T cd05094           2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-------------AARKDFQREAELLTNLQHEH   68 (291)
T ss_pred             CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-------------HHHHHHHHHHHHHhcCCCCC
Confidence            45678999999999999999999864     3455689998743221             22356788999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRD  153 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrD  153 (426)
                      |+++++++......++||||+++++|.+++....              ...+++..++.++.||+.||+|||++||+|||
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d  148 (291)
T cd05094          69 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRD  148 (291)
T ss_pred             cceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            9999999999999999999999999999987542              23488999999999999999999999999999


Q ss_pred             CCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 014344          154 LKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS  233 (426)
Q Consensus       154 lKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (426)
                      |||+|||++.++.++|+|||++........                                                  
T Consensus       149 lkp~Nil~~~~~~~~l~dfg~a~~~~~~~~--------------------------------------------------  178 (291)
T cd05094         149 LATRNCLVGANLLVKIGDFGMSRDVYSTDY--------------------------------------------------  178 (291)
T ss_pred             cCcceEEEccCCcEEECCCCcccccCCCce--------------------------------------------------
Confidence            999999999999999999999875432110                                                  


Q ss_pred             CCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHH
Q 014344          234 DSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPP--DLVGEPTPL  310 (426)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~  310 (426)
                          ........|++.|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+.....  .....+..+
T Consensus       179 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (291)
T cd05094         179 ----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEV  254 (291)
T ss_pred             ----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHH
Confidence                011123347888999999999999999999999999999998 9999988877766655543222  223457889


Q ss_pred             HHHHHHHhccCCCCCCChHHHhc
Q 014344          311 RNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       311 ~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .+++.+||+.+|.+||+++++++
T Consensus       255 ~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         255 YDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             HHHHHHHcccChhhCcCHHHHHH
Confidence            99999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=6.4e-42  Score=332.40  Aligned_cols=257  Identities=26%  Similarity=0.401  Sum_probs=204.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCC--CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVES--SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRG   93 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~   93 (426)
                      +|++.+.||+|+||.||+|++..+  +..||+|++....           ......+.+..|+.+++++ +||||+++++
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   69 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-----------SKKILAKRALRELKLLRHFRGHKNITCLYD   69 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-----------ccchhHHHHHHHHHHHHHhcCCCChheeee
Confidence            489999999999999999999888  8999999984321           1112345677899999999 5999999998


Q ss_pred             eeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           94 VLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        94 ~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      .+..    ...+|++++|+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|
T Consensus        70 ~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl  146 (332)
T cd07857          70 MDIVFPGNFNELYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKI  146 (332)
T ss_pred             eeeeccccCCcEEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEe
Confidence            7532    356889999985 7888887543  45999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+......                                                    ........+||+.
T Consensus       147 ~Dfg~a~~~~~~~~~----------------------------------------------------~~~~~~~~~g~~~  174 (332)
T cd07857         147 CDFGLARGFSENPGE----------------------------------------------------NAGFMTEYVATRW  174 (332)
T ss_pred             CcCCCceeccccccc----------------------------------------------------ccccccCcccCcc
Confidence            999999865421100                                                    0011234578999


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--------------------------CC--
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--------------------------RP--  300 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~--------------------------~~--  300 (426)
                      |+|||++.+ ..++.++|+||+||++|+|++|.+||...+....+..++.                          ..  
T Consensus       175 y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (332)
T cd07857         175 YRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPK  254 (332)
T ss_pred             ccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCC
Confidence            999998766 5689999999999999999999999987664433322211                          00  


Q ss_pred             ----CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          301 ----PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       301 ----~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                          ......+..+.+||.+||+.||++|||+.+++.||||+.
T Consensus       255 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~  297 (332)
T cd07857         255 KPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI  297 (332)
T ss_pred             cchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence                011234678999999999999999999999999999964

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=8.7e-42  Score=320.33  Aligned_cols=252  Identities=27%  Similarity=0.404  Sum_probs=207.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.+......          .......+.+|++++++++|++|+++++++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~   71 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM----------DAKARQDCLKEIDLLKQLDHPNVIKYLASF   71 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeeccccc----------chhhHHHHHHHHHHHHhCCCCCeeeeeeee
Confidence            5799999999999999999999999999999988542211          112356788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ..+...++||||++|++|..++...  ....+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||
T Consensus        72 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~  151 (267)
T cd08224          72 IENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLG  151 (267)
T ss_pred             ecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccc
Confidence            9999999999999999999987643  23458999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++..+....                                                        .......|++.|+||
T Consensus       152 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~ap  175 (267)
T cd08224         152 LGRFFSSKT--------------------------------------------------------TAAHSLVGTPYYMSP  175 (267)
T ss_pred             eeeeccCCC--------------------------------------------------------cccceecCCccccCH
Confidence            987553211                                                        011233588899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcC--CCCCC-CCCHHHHHHHHHHhccCCCCCCCh
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR--KETFYRILCR--PPDLV-GEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~--~~~~~-~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |.+.+..++.++|+|||||++|+|++|+.||.....  .+....+...  ++... ..+..+.++|.+||..+|++|||+
T Consensus       176 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~  255 (267)
T cd08224         176 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDI  255 (267)
T ss_pred             HHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCH
Confidence            999999999999999999999999999999965532  2233333221  11111 456789999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      .+|+.
T Consensus       256 ~~il~  260 (267)
T cd08224         256 SYVLQ  260 (267)
T ss_pred             HHHHH
Confidence            99874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2.7e-42  Score=329.07  Aligned_cols=250  Identities=24%  Similarity=0.405  Sum_probs=209.6

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |....+||+|+||.||++....+++.||||++....             ......+..|+.+++.++||||+++++.+..
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   88 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-------------QQRRELLFNEVVIMRDYQHENVVEMYNSYLV   88 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-------------hhHHHHHHHHHHHHHhcCCcchhheeeEEEe
Confidence            444578999999999999999999999999873211             1234567889999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      .+..|+||||+++++|.+++..   ..+++..++.++.|++.||+|||+.|++||||+|+||+++.++.++|+|||++..
T Consensus        89 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~  165 (292)
T cd06657          89 GDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ  165 (292)
T ss_pred             CCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEccccccee
Confidence            9999999999999999987653   3489999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      .....                                                        .......|++.|+|||.+.
T Consensus       166 ~~~~~--------------------------------------------------------~~~~~~~~~~~y~~pE~~~  189 (292)
T cd06657         166 VSKEV--------------------------------------------------------PRRKSLVGTPYWMAPELIS  189 (292)
T ss_pred             ccccc--------------------------------------------------------ccccccccCccccCHHHhc
Confidence            43110                                                        0112345889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----CCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       258 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +..++.++|+||+||++|+|++|..||.+....+....+....+    .....+..+.++|.+||..+|.+||++.+++.
T Consensus       190 ~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         190 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            88889999999999999999999999988776554443322111    22345788999999999999999999999999


Q ss_pred             CCCcCC
Q 014344          334 HEFFKG  339 (426)
Q Consensus       334 hp~f~~  339 (426)
                      ||||..
T Consensus       270 ~~~~~~  275 (292)
T cd06657         270 HPFLAK  275 (292)
T ss_pred             ChHHhc
Confidence            999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-42  Score=318.25  Aligned_cols=246  Identities=46%  Similarity=0.803  Sum_probs=211.7

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEE
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGY  103 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l  103 (426)
                      ||.|+||.||++.+..+++.||+|++.+......          .....+..|+.+++.++||||+.+++.+..+..+|+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   70 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR----------KEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYL   70 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch----------HHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEE
Confidence            6999999999999998999999999866543221          245678889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCC
Q 014344          104 AIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP  183 (426)
Q Consensus       104 V~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~  183 (426)
                      ||||+.+++|.+++....  .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++....... 
T Consensus        71 v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-  147 (250)
T cd05123          71 VLEYAPGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-  147 (250)
T ss_pred             EEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-
Confidence            999999999999887653  48999999999999999999999999999999999999999999999999987653211 


Q ss_pred             CCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCCh
Q 014344          184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF  263 (426)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  263 (426)
                                                                             .......|+..|+|||.+.+...+.
T Consensus       148 -------------------------------------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~  172 (250)
T cd05123         148 -------------------------------------------------------SRTNTFCGTPEYLAPEVLLGKGYGK  172 (250)
T ss_pred             -------------------------------------------------------CcccCCcCCccccChHHhCCCCCCc
Confidence                                                                   1123345788999999999888899


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCCh---HHHhcCCCc
Q 014344          264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGV---EEIKGHEFF  337 (426)
Q Consensus       264 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~---~eil~hp~f  337 (426)
                      ++|+|||||++|+|++|..||...+.......+........ ..+..+.++|++||..||++||++   +++++||||
T Consensus       173 ~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         173 AVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            99999999999999999999988877666666654333332 337889999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=3.3e-42  Score=329.50  Aligned_cols=258  Identities=26%  Similarity=0.381  Sum_probs=207.4

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      +...++|++.+.||+|+||.||+|.+..+++.||+|++.....           .......+..|+.+++.++||||+++
T Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----------~~~~~~~~~~e~~~~~~l~h~~i~~~   71 (302)
T cd07864           3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-----------KEGFPITAIREIKILRQLNHRNIVNL   71 (302)
T ss_pred             hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-----------ccCchHHHHHHHHHHHhCCCCCeeee
Confidence            3456789999999999999999999999999999999854321           11123456679999999999999999


Q ss_pred             eeeeecCC----------eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee
Q 014344           92 RGVLSTDK----------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI  161 (426)
Q Consensus        92 ~~~~~~~~----------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl  161 (426)
                      ++++.+..          .+|+|+||+++ +|..++... ...+++..++.++.||+.||.|||+.||+||||||+||++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili  149 (302)
T cd07864          72 KEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL  149 (302)
T ss_pred             eheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            99987654          89999999985 676665543 3358999999999999999999999999999999999999


Q ss_pred             ccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          162 QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       162 ~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                      ++++.+||+|||++..+.....                                                       ...
T Consensus       150 ~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------------------~~~  174 (302)
T cd07864         150 NNKGQIKLADFGLARLYNSEES-------------------------------------------------------RPY  174 (302)
T ss_pred             CCCCcEEeCcccccccccCCcc-------------------------------------------------------ccc
Confidence            9999999999999876542210                                                       001


Q ss_pred             cccccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC----------------
Q 014344          242 NSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP----------------  301 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~----------------  301 (426)
                      ....+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...+..+.+..+..   .+.                
T Consensus       175 ~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (302)
T cd07864         175 TNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTM  254 (302)
T ss_pred             ccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccc
Confidence            11246778999998865 4578899999999999999999999987766554433321   110                


Q ss_pred             ------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          302 ------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       302 ------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                                  .....+..+.++|.+||..||++||++.+++.||||
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         255 KPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                        111346789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=4.9e-42  Score=325.93  Aligned_cols=259  Identities=25%  Similarity=0.419  Sum_probs=219.1

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ....|++...||+|++|.||+|.+..+++.||+|++.....              ....+..|+.+++.++|+||+++++
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~   82 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--------------NKELIINEILIMKDCKHPNIVDYYD   82 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--------------hHHHHHHHHHHHHHCCCCCeeEEEE
Confidence            34569999999999999999999998999999999853321              2456778999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      .+......|+|+||++|++|.+++.... ..++...+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~  161 (286)
T cd06614          83 SYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFG  161 (286)
T ss_pred             EEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccc
Confidence            9999999999999999999999987654 359999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        .......+++.|+||
T Consensus       162 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~~P  185 (286)
T cd06614         162 FAAQLTKEK--------------------------------------------------------SKRNSVVGTPYWMAP  185 (286)
T ss_pred             hhhhhccch--------------------------------------------------------hhhccccCCcccCCH
Confidence            876543110                                                        011223478899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-C---CCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-D---LVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~---~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      |.+.+..++.++|+|||||++|+|++|..||...+.......+..... .   ....+..+.+||.+||+.+|.+||++.
T Consensus       186 E~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  265 (286)
T cd06614         186 EVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAE  265 (286)
T ss_pred             hHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHH
Confidence            999988899999999999999999999999998776655555433221 1   112567899999999999999999999


Q ss_pred             HHhcCCCcCCCChh
Q 014344          330 EIKGHEFFKGVNWE  343 (426)
Q Consensus       330 eil~hp~f~~~~~~  343 (426)
                      +++.||||+...|.
T Consensus       266 ~il~~~~~~~~~~~  279 (286)
T cd06614         266 ELLQHPFLKKACPK  279 (286)
T ss_pred             HHhhChHhhccCch
Confidence            99999999875443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1.4e-41  Score=327.27  Aligned_cols=252  Identities=25%  Similarity=0.410  Sum_probs=209.5

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |..+++||+|+||+||+|++..+++.||+|++.....          ........+..|+.+++.++|||++++++++.+
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   92 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK----------QTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK   92 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc----------CchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe
Confidence            7778899999999999999999999999999854321          112234567889999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ....|+||||+. ++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++..
T Consensus        93 ~~~~~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~  170 (313)
T cd06633          93 EHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASK  170 (313)
T ss_pred             CCEEEEEEecCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcc
Confidence            999999999996 57777765433 4589999999999999999999999999999999999999999999999998753


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      ..                                                            ..+...|+..|+|||++.
T Consensus       171 ~~------------------------------------------------------------~~~~~~~~~~y~aPE~~~  190 (313)
T cd06633         171 SS------------------------------------------------------------PANSFVGTPYWMAPEVIL  190 (313)
T ss_pred             cC------------------------------------------------------------CCCCccccccccChhhcc
Confidence            21                                                            112345888999999984


Q ss_pred             ---CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CC--CCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          258 ---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PD--LVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       258 ---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~--~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                         ...++.++|+|||||++|+|++|..||...+.......+.... +.  ....+..+.+||.+||+++|.+||++.++
T Consensus       191 ~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~  270 (313)
T cd06633         191 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAEL  270 (313)
T ss_pred             ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence               3557889999999999999999999998877666555554322 21  12346779999999999999999999999


Q ss_pred             hcCCCcCCCC
Q 014344          332 KGHEFFKGVN  341 (426)
Q Consensus       332 l~hp~f~~~~  341 (426)
                      +.||||...+
T Consensus       271 l~~~~~~~~~  280 (313)
T cd06633         271 LRHDFVRRDR  280 (313)
T ss_pred             hcCcccCCCc
Confidence            9999997543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=7.9e-42  Score=327.54  Aligned_cols=260  Identities=18%  Similarity=0.308  Sum_probs=213.4

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEc-------CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHH
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDV-------ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR   81 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-------~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~   81 (426)
                      +...+...+|++.+.||+|+||.||+|+..       ..+..||+|++....            .....+.+..|+.+++
T Consensus         8 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~------------~~~~~~~~~~E~~~l~   75 (304)
T cd05101           8 PRWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA------------TEKDLSDLVSEMEMMK   75 (304)
T ss_pred             CcccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc------------chHHHHHHHHHHHHHH
Confidence            456788889999999999999999999853       234579999884321            1123467888999999


Q ss_pred             hc-CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHH
Q 014344           82 NV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHN  146 (426)
Q Consensus        82 ~l-~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~  146 (426)
                      .+ +||||+++++++.....+|+||||+.+++|.+++....              ...++...+..++.||+.||.|||+
T Consensus        76 ~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~  155 (304)
T cd05101          76 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS  155 (304)
T ss_pred             hhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence            99 79999999999999999999999999999999987542              1347788899999999999999999


Q ss_pred             CCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCC
Q 014344          147 MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIG  226 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (426)
                      +||+||||||+|||++.++.+||+|||++..+.....                                           
T Consensus       156 ~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-------------------------------------------  192 (304)
T cd05101         156 QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY-------------------------------------------  192 (304)
T ss_pred             CCeeecccccceEEEcCCCcEEECCCccceecccccc-------------------------------------------
Confidence            9999999999999999999999999999876532110                                           


Q ss_pred             CCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCC
Q 014344          227 PDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDL  303 (426)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~  303 (426)
                                 ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+....  ...
T Consensus       193 -----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  261 (304)
T cd05101         193 -----------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP  261 (304)
T ss_pred             -----------cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCC
Confidence                       001112236678999999999889999999999999999998 899999888777766664332  222


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ...+..+.+||.+||..+|.+||++.++++.
T Consensus       262 ~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         262 ANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             CCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            3457889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=7.6e-42  Score=326.43  Aligned_cols=264  Identities=26%  Similarity=0.406  Sum_probs=212.4

Q ss_pred             CCCCCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344            5 VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus         5 ~~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      .-+.....+++++|++.+.||+|+||.||+|.+..+++.||||.+.+...            ......+..|+.++.++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~------------~~~~~~~~~e~~~~~~~~   71 (296)
T cd06618           4 TIDGQKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN------------KEENKRILMDLDVVLKSH   71 (296)
T ss_pred             eecceeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC------------hHHHHHHHHHHHHHHhcc
Confidence            33445678899999999999999999999999999999999999854321            122345566777666664


Q ss_pred             -CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeec
Q 014344           85 -HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQ  162 (426)
Q Consensus        85 -hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~  162 (426)
                       ||||+++++++.++..+|++|||+. ++|.+++.... ..+++..+..++.||+.||.|||+ .||+||||+|+||+++
T Consensus        72 ~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~  149 (296)
T cd06618          72 DCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD  149 (296)
T ss_pred             CCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc
Confidence             9999999999999999999999985 67887766543 368999999999999999999997 6999999999999999


Q ss_pred             cCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          163 ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       163 ~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                      .++.+||+|||++..+....                                                         ...
T Consensus       150 ~~~~~kL~dfg~~~~~~~~~---------------------------------------------------------~~~  172 (296)
T cd06618         150 ASGNVKLCDFGISGRLVDSK---------------------------------------------------------AKT  172 (296)
T ss_pred             CCCCEEECccccchhccCCC---------------------------------------------------------ccc
Confidence            99999999999987553211                                                         011


Q ss_pred             ccccCCCCccchhhcCCC----CChhhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCCC----CCCCCCHHHHHH
Q 014344          243 SFVGTEEYVAPEIIEGKG----HDFAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCRPP----DLVGEPTPLRNL  313 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~----~~~~~~~~~~~l  313 (426)
                      ...+++.|+|||.+.+..    ++.++|+|||||++|+|++|+.||..... .+.+..++....    .....+..+.+|
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  252 (296)
T cd06618         173 RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSF  252 (296)
T ss_pred             CCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence            224788899999987654    78899999999999999999999976433 344444443221    112357789999


Q ss_pred             HHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          314 IRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      |.+||..||.+||++++++.||||..
T Consensus       253 i~~~l~~~p~~Rp~~~~il~~~~~~~  278 (296)
T cd06618         253 VDLCLTKDHRKRPKYRELLQHPFIRR  278 (296)
T ss_pred             HHHHccCChhhCCCHHHHhcChhhhc
Confidence            99999999999999999999999964

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-41  Score=317.31  Aligned_cols=247  Identities=22%  Similarity=0.328  Sum_probs=209.7

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+..++|++.+.||.|+||.||+|..  .++.||+|.+.....              ..+++..|+.+++.++|+||+++
T Consensus         2 ~~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~   65 (256)
T cd05039           2 AINSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST--------------AAQAFLAEASVMTTLRHPNLVQL   65 (256)
T ss_pred             ccChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh--------------HHHHHHHHHHHHHhcCCcceeee
Confidence            35677899999999999999999986  478999999843321              34578889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++.+....|+||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|
T Consensus        66 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d  145 (256)
T cd05039          66 LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSD  145 (256)
T ss_pred             EEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcc
Confidence            99999999999999999999999998776555699999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||.+.......                                                           ....++..|+
T Consensus       146 ~g~~~~~~~~~-----------------------------------------------------------~~~~~~~~~~  166 (256)
T cd05039         146 FGLAKEASQGQ-----------------------------------------------------------DSGKLPVKWT  166 (256)
T ss_pred             ccccccccccc-----------------------------------------------------------ccCCCccccc
Confidence            99987652110                                                           0112455799


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||.+.+..++.++|+|||||++|+|++ |+.||...+.......+...  .......+..+.++|.+||..+|++||++
T Consensus       167 ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  246 (256)
T cd05039         167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTF  246 (256)
T ss_pred             CchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCH
Confidence            9999988889999999999999999997 99999888776665554432  12233457889999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      .++++
T Consensus       247 ~~l~~  251 (256)
T cd05039         247 KQLRE  251 (256)
T ss_pred             HHHHH
Confidence            99985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.4e-41  Score=316.42  Aligned_cols=254  Identities=30%  Similarity=0.476  Sum_probs=214.3

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|++|.||+|.+..+++.|++|++......           ....+.+..|+.++++++||||+++++.+.
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   69 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-----------EEELEALEREIRILSSLQHPNIVRYYGSER   69 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-----------hHHHHHHHHHHHHHHHcCCCCEeeEEEEEe
Confidence            488999999999999999999999999999998544221           234567888999999999999999999998


Q ss_pred             cC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           97 TD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        97 ~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      ..  ..+++|+||+++++|.+++....  .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||.
T Consensus        70 ~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~  147 (260)
T cd06606          70 DEEKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGC  147 (260)
T ss_pred             cCCCCeEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccccc
Confidence            88  89999999999999999987654  599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.........                                                      .......++..|+|||
T Consensus       148 ~~~~~~~~~~------------------------------------------------------~~~~~~~~~~~y~~pE  173 (260)
T cd06606         148 AKRLGDIETG------------------------------------------------------EGTGSVRGTPYWMAPE  173 (260)
T ss_pred             EEeccccccc------------------------------------------------------ccccCCCCCccccCHh
Confidence            8876432110                                                      0112335888999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhc---CCCCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS-RKETFYRILC---RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      .+.+..++.++|+|||||++|+|++|..||.... .......+..   .+......+..+.+||.+||+.+|.+||++.+
T Consensus       174 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~  253 (260)
T cd06606         174 VIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADE  253 (260)
T ss_pred             hhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHH
Confidence            9998889999999999999999999999998776 2333333321   11222344788999999999999999999999


Q ss_pred             HhcCCCc
Q 014344          331 IKGHEFF  337 (426)
Q Consensus       331 il~hp~f  337 (426)
                      ++.||||
T Consensus       254 ll~~~~~  260 (260)
T cd06606         254 LLQHPFL  260 (260)
T ss_pred             HhhCCCC
Confidence            9999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=7.2e-42  Score=331.46  Aligned_cols=251  Identities=28%  Similarity=0.463  Sum_probs=205.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      -++|++++.||.|+||.||+|.+..+++.||+|++.+...           .....+.+..|+.+++.++||||++++++
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~hpniv~~~~~   77 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-----------TPVLAKRTYRELKLLKHLRHENIISLSDI   77 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-----------ccchhHHHHHHHHHHHhcCCCCeeeEeee
Confidence            3579999999999999999999999999999998744211           11234567789999999999999999999


Q ss_pred             eec-CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           95 LST-DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        95 ~~~-~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      |.. ...+|+||||+ +++|..++..   ..+++..+..++.||+.||.|||++||+||||+|.|||++.++.++|+|||
T Consensus        78 ~~~~~~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg  153 (328)
T cd07856          78 FISPLEDIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFG  153 (328)
T ss_pred             EecCCCcEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccc
Confidence            865 56889999999 5788887653   348899999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.....                                                           .....++++.|+||
T Consensus       154 ~~~~~~~-----------------------------------------------------------~~~~~~~~~~y~aP  174 (328)
T cd07856         154 LARIQDP-----------------------------------------------------------QMTGYVSTRYYRAP  174 (328)
T ss_pred             cccccCC-----------------------------------------------------------CcCCCcccccccCc
Confidence            8864321                                                           11223578889999


Q ss_pred             hhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cC------------------------CC----
Q 014344          254 EIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CR------------------------PP----  301 (426)
Q Consensus       254 E~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~------------------------~~----  301 (426)
                      |.+.+ ..++.++|+|||||++|+|++|++||........+..+.   ..                        .+    
T Consensus       175 E~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (328)
T cd07856         175 EIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFS  254 (328)
T ss_pred             eeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHH
Confidence            99866 568999999999999999999999998766533221110   00                        00    


Q ss_pred             -CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          302 -DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       302 -~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                       .....+..+.++|++||+.+|++|||+++++.||||..
T Consensus       255 ~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~  293 (328)
T cd07856         255 EKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP  293 (328)
T ss_pred             HHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence             11234678999999999999999999999999999964

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=7.4e-42  Score=319.63  Aligned_cols=244  Identities=19%  Similarity=0.272  Sum_probs=199.7

Q ss_pred             eecccCceEEEEEEE--cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCe
Q 014344           23 ALGRGAKGVVFLVKD--VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        23 ~LG~G~~g~V~~a~~--~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~  100 (426)
                      +||+|+||.||+|..  ..+++.+|+|++....           ......+.+..|+.+++.++||||+++++++. ...
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~   69 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-----------NDPALKDELLREANVMQQLDNPYIVRMIGICE-AES   69 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-----------CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCC
Confidence            689999999999964  4667899999984321           11234567888999999999999999999875 456


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      .++||||+++++|.+++...  ..+++..+..++.|++.||+|||++||+||||||.|||++.++.+||+|||++..+..
T Consensus        70 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~  147 (257)
T cd05116          70 WMLVMELAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGA  147 (257)
T ss_pred             cEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCC
Confidence            78999999999999988654  3489999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      ....                                                     ........+++.|+|||.+.+..
T Consensus       148 ~~~~-----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~  174 (257)
T cd05116         148 DENY-----------------------------------------------------YKAKTHGKWPVKWYAPECMNYYK  174 (257)
T ss_pred             CCCe-----------------------------------------------------eeecCCCCCCccccCHhHhccCC
Confidence            1100                                                     00011123567899999998888


Q ss_pred             CChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          261 HDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ++.++|+|||||++|||++ |..||...+..+....+...  ++.....+..+.+||.+||+.||++||++++|..
T Consensus       175 ~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         175 FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            9999999999999999997 99999988777666655432  2333456889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.1e-41  Score=328.26  Aligned_cols=258  Identities=19%  Similarity=0.289  Sum_probs=210.5

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcC-------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVE-------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN   82 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~   82 (426)
                      .+.+..++|.+++.||+|+||.||+|++..       ....+|+|++....            .......+..|+.+++.
T Consensus         6 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~------------~~~~~~~~~~E~~~l~~   73 (314)
T cd05099           6 KWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA------------TDKDLADLISEMELMKL   73 (314)
T ss_pred             cccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC------------ChHHHHHHHHHHHHHHh
Confidence            345667889999999999999999998642       34579999874321            12235567889999999


Q ss_pred             c-CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           83 V-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        83 l-~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      + +||||+++++++.....+|+||||+++|+|.+++....              ...++...+..++.||+.||.|||++
T Consensus        74 l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~  153 (314)
T cd05099          74 IGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR  153 (314)
T ss_pred             ccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            9 59999999999999999999999999999999986532              23488899999999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      ||+||||||+|||++.++.+||+|||+++........                                           
T Consensus       154 gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------------------  190 (314)
T cd05099         154 RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY-------------------------------------------  190 (314)
T ss_pred             CeeeccccceeEEEcCCCcEEEccccccccccccccc-------------------------------------------
Confidence            9999999999999999999999999999765321100                                           


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCC
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLV  304 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~  304 (426)
                                 .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+....  ....
T Consensus       191 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  259 (314)
T cd05099         191 -----------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPS  259 (314)
T ss_pred             -----------cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence                       00111124567999999999889999999999999999998 999999888777666655432  2233


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ..+.++.+||.+||..+|++|||+.++++
T Consensus       260 ~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         260 NCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            45778999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.1e-41  Score=320.54  Aligned_cols=256  Identities=25%  Similarity=0.340  Sum_probs=209.8

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCc---eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSE---SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ...+|++.+.||+|+||.||+|.+..+++   .||||++.+..            .......+..|+.+++.++||||++
T Consensus         2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~e~~~l~~l~h~ni~~   69 (269)
T cd05065           2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY------------TEKQRRDFLSEASIMGQFDHPNIIH   69 (269)
T ss_pred             ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC------------CHHHHHHHHHHHHHHHhCCCcCcce
Confidence            46789999999999999999999887665   59999985321            1223467888999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++.++...++||||+++++|.+++.... +.++...++.++.|++.||.|||++|++||||||+||+++.++.++|+
T Consensus        70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~  148 (269)
T cd05065          70 LEGVVTKSRPVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVS  148 (269)
T ss_pred             EEEEECCCCceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEEC
Confidence            9999999999999999999999999886543 458999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++...........                                                   ........++..|
T Consensus       149 dfg~~~~~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~y  177 (269)
T cd05065         149 DFGLSRFLEDDTSDPT---------------------------------------------------YTSSLGGKIPIRW  177 (269)
T ss_pred             CCccccccccCccccc---------------------------------------------------cccccCCCcceee
Confidence            9999875532110000                                                   0000001124579


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      +|||.+.+..++.++|||||||++|||++ |..||...+..+....+..  ..+...+.+..+.+++.+||..+|++||+
T Consensus       178 ~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  257 (269)
T cd05065         178 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPK  257 (269)
T ss_pred             cCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcC
Confidence            99999999999999999999999999886 9999988777666555543  22334466788999999999999999999


Q ss_pred             hHHHhc
Q 014344          328 VEEIKG  333 (426)
Q Consensus       328 ~~eil~  333 (426)
                      +++|+.
T Consensus       258 ~~~i~~  263 (269)
T cd05065         258 FGQIVS  263 (269)
T ss_pred             HHHHHH
Confidence            999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=9.6e-42  Score=329.04  Aligned_cols=251  Identities=27%  Similarity=0.422  Sum_probs=210.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ..|+..+.||+|+||.||+|++..++..+|+|++.....          ........+..|+.+++.++|||++++++++
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   94 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK----------QSNEKWQDIIKEVKFLQRIKHPNSIEYKGCY   94 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC----------CchHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            348899999999999999999999999999999854311          1123456788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+...|+||||+. |+|.+++... ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++
T Consensus        95 ~~~~~~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~  172 (317)
T cd06635          95 LREHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSA  172 (317)
T ss_pred             eeCCeEEEEEeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCc
Confidence            99999999999997 5777766543 345899999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .....                                                            .....|++.|+|||.
T Consensus       173 ~~~~~------------------------------------------------------------~~~~~~~~~y~aPE~  192 (317)
T cd06635         173 SIASP------------------------------------------------------------ANSFVGTPYWMAPEV  192 (317)
T ss_pred             cccCC------------------------------------------------------------cccccCCccccChhh
Confidence            64321                                                            112358889999999


Q ss_pred             hc---CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          256 IE---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       256 ~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      +.   ...++.++|+|||||++|+|++|.+||...........+.....   .....+..+.+||.+||+.+|.+||++.
T Consensus       193 ~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  272 (317)
T cd06635         193 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSE  272 (317)
T ss_pred             hhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHH
Confidence            74   35678899999999999999999999988877666666554322   2224567899999999999999999999


Q ss_pred             HHhcCCCcC
Q 014344          330 EIKGHEFFK  338 (426)
Q Consensus       330 eil~hp~f~  338 (426)
                      ++++|+|+.
T Consensus       273 ~il~~~~~~  281 (317)
T cd06635         273 ELLKHMFVL  281 (317)
T ss_pred             HHHhChhhh
Confidence            999999984

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.8e-41  Score=318.86  Aligned_cols=255  Identities=22%  Similarity=0.296  Sum_probs=210.0

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCc---eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSE---SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      +..++|+..+.||+|+||.||+|.+..+++   .+|+|.+....            .......+..|+++++.++||||+
T Consensus         2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~i~   69 (268)
T cd05063           2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY------------TEKQRQDFLSEASIMGQFSHHNII   69 (268)
T ss_pred             CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC------------CHHHHHHHHHHHHHHhcCCCCCee
Confidence            345679999999999999999999876665   69999874321            112345678899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++...+..|+||||+++++|.+++.... ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||
T Consensus        70 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl  148 (268)
T cd05063          70 RLEGVVTKFKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKV  148 (268)
T ss_pred             EEEEEEccCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEE
Confidence            99999999999999999999999999886543 45899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.........                                                     .........++.
T Consensus       149 ~dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  175 (268)
T cd05063         149 SDFGLSRVLEDDPEG-----------------------------------------------------TYTTSGGKIPIR  175 (268)
T ss_pred             CCCccceeccccccc-----------------------------------------------------ceeccCCCcCce
Confidence            999998765321100                                                     000111123567


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|+|++ |..||...+..+....+..  ..+.....+..+.+++.+||..+|++||
T Consensus       176 y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp  255 (268)
T cd05063         176 WTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRP  255 (268)
T ss_pred             ecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCc
Confidence            999999998889999999999999999997 9999988877766666543  2333445688899999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      ++.+|++
T Consensus       256 ~~~~i~~  262 (268)
T cd05063         256 RFVDIVN  262 (268)
T ss_pred             CHHHHHH
Confidence            9999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=6.8e-42  Score=324.32  Aligned_cols=252  Identities=29%  Similarity=0.490  Sum_probs=207.2

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |++++.||.|+||.||+|.+..+++.+|+|++....           ........+..|+.+++.++|||++++++++..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-----------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   69 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-----------EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTS   69 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-----------ccccchHHHHHHHHHHHhccCCCeeeheeeEec
Confidence            789999999999999999999999999999996542           111234567789999999999999999999988


Q ss_pred             C--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           98 D--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        98 ~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .  ...++||||++ ++|.+++.... ..+++..++.++.||+.||+|||+.|++|+||||+||++++++.++|+|||++
T Consensus        70 ~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~  147 (287)
T cd07840          70 KGKGSIYMVFEYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLA  147 (287)
T ss_pred             CCCCcEEEEecccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccce
Confidence            8  89999999997 58888776542 45999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ........                                                       .......++..|+|||.
T Consensus       148 ~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~~PE~  172 (287)
T cd07840         148 RPYTKRNS-------------------------------------------------------ADYTNRVITLWYRPPEL  172 (287)
T ss_pred             eeccCCCc-------------------------------------------------------ccccccccccccCCcee
Confidence            76642210                                                       01112246788999998


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C-----C-----------------------CC
Q 014344          256 IEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P-----P-----------------------DL  303 (426)
Q Consensus       256 ~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~-----~-----------------------~~  303 (426)
                      +.+ ..++.++|||||||++|+|++|+.||...+.......+...   +     +                       ..
T Consensus       173 ~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T cd07840         173 LLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFF  252 (287)
T ss_pred             eEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHh
Confidence            765 45789999999999999999999999887765554443211   0     0                       00


Q ss_pred             CC-CCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          304 VG-EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       304 ~~-~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      .. .+..+.++|++||..+|.+||++.+++.||||
T Consensus       253 ~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         253 KHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            11 26778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=5.4e-42  Score=320.90  Aligned_cols=256  Identities=27%  Similarity=0.457  Sum_probs=210.8

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|.+.+.||+|+||.||+|.+..++..+++|++........        .......+..|+.+++.++||||+++++++.
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGEL--------NPNETVQANQEAQLLSKLDHPAIVKFHASFL   72 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEecccccccc--------CcchHHHHHHHHHHHHhCCCCcHHHHHHHHh
Confidence            58999999999999999999988888888888743221110        1112335667899999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~--~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +....++||||+++++|.+++..  .....+++..++.++.|++.||.|||++|++||||||+||+++. +.++|+|||+
T Consensus        73 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~  151 (260)
T cd08222          73 ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGV  151 (260)
T ss_pred             cCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCc
Confidence            99999999999999999988764  23346899999999999999999999999999999999999975 6799999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        .......|++.|+|||
T Consensus       152 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~~pe  175 (260)
T cd08222         152 SRLLMGSC--------------------------------------------------------DLATTFTGTPYYMSPE  175 (260)
T ss_pred             eeecCCCc--------------------------------------------------------ccccCCCCCcCccCHH
Confidence            87653211                                                        0112334788999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      .+.+..++.++|+||||+++|+|++|..||...........+.....  .....+..+.++|.+||..+|++||++.+++
T Consensus       176 ~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il  255 (260)
T cd08222         176 ALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEIL  255 (260)
T ss_pred             HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHh
Confidence            99888899999999999999999999999988777666666543322  1234578899999999999999999999999


Q ss_pred             cCCCc
Q 014344          333 GHEFF  337 (426)
Q Consensus       333 ~hp~f  337 (426)
                      .||||
T Consensus       256 ~~~~~  260 (260)
T cd08222         256 RNPFI  260 (260)
T ss_pred             hCCCC
Confidence            99997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1.4e-41  Score=321.92  Aligned_cols=255  Identities=20%  Similarity=0.252  Sum_probs=204.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCce----EEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSES----FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~----vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      +.+...+|++++.||+|+||+||+|....+++.    +|+|.+...            .......++..|+.+++.++||
T Consensus         2 ~~~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~------------~~~~~~~~~~~~~~~l~~l~h~   69 (279)
T cd05111           2 RILKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR------------SGRQTFQEITDHMLAMGSLDHA   69 (279)
T ss_pred             CcCCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc------------cchHHHHHHHHHHHHHhcCCCC
Confidence            346678899999999999999999999888775    555554211            1112345677788899999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++. ....++++||+++|+|.+++.... +.+++..+..++.||+.||.|||++|++||||||+|||++.++.
T Consensus        70 ~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~  147 (279)
T cd05111          70 YIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSI  147 (279)
T ss_pred             CcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc
Confidence            9999999875 456789999999999999987543 45899999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||+++.+.....                                                      ........+
T Consensus       148 ~kl~Dfg~~~~~~~~~~------------------------------------------------------~~~~~~~~~  173 (279)
T cd05111         148 VQIADFGVADLLYPDDK------------------------------------------------------KYFYSEHKT  173 (279)
T ss_pred             EEEcCCccceeccCCCc------------------------------------------------------ccccCCCCC
Confidence            99999999876532110                                                      001122346


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      +..|+|||.+.+..++.++|||||||++|||++ |..||.+.........+...  ++.....+..+.+++.+||..||+
T Consensus       174 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~  253 (279)
T cd05111         174 PIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDEN  253 (279)
T ss_pred             cccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence            778999999998889999999999999999998 99999887765543333221  222234567889999999999999


Q ss_pred             CCCChHHHhc
Q 014344          324 KRIGVEEIKG  333 (426)
Q Consensus       324 ~R~s~~eil~  333 (426)
                      +|||+.|+++
T Consensus       254 ~Rps~~el~~  263 (279)
T cd05111         254 VRPTFKELAN  263 (279)
T ss_pred             cCcCHHHHHH
Confidence            9999999976

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.3e-41  Score=323.30  Aligned_cols=255  Identities=24%  Similarity=0.315  Sum_probs=209.0

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ++.++|++++.||+|+||.||+|.+..     ++..||+|++....            .......+..|+.+++.++|||
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~------------~~~~~~~~~~ei~~l~~l~h~~   69 (288)
T cd05050           2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA------------SADMQADFQREAALMAEFDHPN   69 (288)
T ss_pred             CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc------------CHHHHHHHHHHHHHHHhcCCCc
Confidence            456789999999999999999999753     67889999984321            1123456888999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc--------------------CCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--------------------QMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~--------------------~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      |+++++++..+...|+||||+++++|.+++.....                    ..+++..+..++.||+.||.|||++
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~  149 (288)
T cd05050          70 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER  149 (288)
T ss_pred             hheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999998864321                    2377888999999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      |++||||||+|||++.++.++|+|||++..+......                                           
T Consensus       150 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------  186 (288)
T cd05050         150 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------------------------------------  186 (288)
T ss_pred             CeecccccHhheEecCCCceEECccccceecccCccc-------------------------------------------
Confidence            9999999999999999999999999998755321100                                           


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC--CCC
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPP--DLV  304 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~--~~~  304 (426)
                                 .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+....+.....  ...
T Consensus       187 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  255 (288)
T cd05050         187 -----------KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPD  255 (288)
T ss_pred             -----------cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence                       00111234567999999999999999999999999999997 8899988887776666543321  223


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ..+..+.+||.+||+.+|++|||+.|+++
T Consensus       256 ~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         256 NCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            45788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=9.3e-42  Score=338.22  Aligned_cols=259  Identities=20%  Similarity=0.277  Sum_probs=210.2

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      .+.+..++|.++++||+|+||.||+|++.     .+++.||+|++....            .......+..|+.+|.++.
T Consensus        31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~------------~~~~~~~~~~E~~~l~~l~   98 (401)
T cd05107          31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA------------RSSEKQALMSELKIMSHLG   98 (401)
T ss_pred             cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC------------ChhHHHHHHHHHHHHHhcC
Confidence            46778889999999999999999999864     345689999985321            1122356888999999998


Q ss_pred             -CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc-----------------------------------------
Q 014344           85 -HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE-----------------------------------------  122 (426)
Q Consensus        85 -hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~-----------------------------------------  122 (426)
                       ||||+++++++.....+++|||||.+|+|.+++.....                                         
T Consensus        99 ~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (401)
T cd05107          99 PHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGY  178 (401)
T ss_pred             CCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccc
Confidence             99999999999999999999999999999998865321                                         


Q ss_pred             -------------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344          123 -------------------------------------------------------QMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus       123 -------------------------------------------------------~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                                                                             ..++...+..++.||+.||+|||+.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  258 (401)
T cd05107         179 MDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK  258 (401)
T ss_pred             cccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence                                                                   1366777889999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      ||+||||||+|||++.++.+||+|||+++.......                                            
T Consensus       259 ~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~--------------------------------------------  294 (401)
T cd05107         259 NCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN--------------------------------------------  294 (401)
T ss_pred             CcCcccCCcceEEEeCCCEEEEEecCcceecccccc--------------------------------------------
Confidence            999999999999999999999999999875432110                                            


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---CCCC
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---PPDL  303 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---~~~~  303 (426)
                                .......++++.|+|||.+.+..++.++|||||||++|||++ |..||......+.....+..   ++..
T Consensus       295 ----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p  364 (401)
T cd05107         295 ----------YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKP  364 (401)
T ss_pred             ----------cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCC
Confidence                      001122357889999999999889999999999999999998 89999876655554443322   2223


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ...+..+.+||.+||..+|.+||++++|+..
T Consensus       365 ~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         365 AHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3457889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=6.8e-42  Score=323.81  Aligned_cols=251  Identities=28%  Similarity=0.478  Sum_probs=207.8

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |++.+.||.|++|.||+|.+..+++.+|+|.+......           ......+..|+.+|+.++||||+++++++..
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   69 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-----------EGIPKTALREIKLLKELNHPNIIKLLDVFRH   69 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-----------chhHHHHHHHHHHHHHhcCCCcchHHHhhcc
Confidence            67889999999999999999999999999988543211           1234577789999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ...+|+|+||+.+ +|..++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+..
T Consensus        70 ~~~~~~v~e~~~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~  147 (283)
T cd05118          70 KGDLYLVFEFMDT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARS  147 (283)
T ss_pred             CCCEEEEEeccCC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEe
Confidence            9999999999974 8877766543 4589999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      .....                                                        .......++..|+|||.+.
T Consensus       148 ~~~~~--------------------------------------------------------~~~~~~~~~~~~~~PE~~~  171 (283)
T cd05118         148 FGSPV--------------------------------------------------------RPYTHYVVTRWYRAPELLL  171 (283)
T ss_pred             cCCCc--------------------------------------------------------ccccCccCcccccCcHHHh
Confidence            64221                                                        0011234788899999998


Q ss_pred             CC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C----------------------------CCCCC
Q 014344          258 GK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P----------------------------PDLVG  305 (426)
Q Consensus       258 ~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~----------------------------~~~~~  305 (426)
                      +. .++.++|+|||||++|+|++|+.||...+..+.+..+...   +                            .....
T Consensus       172 ~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (283)
T cd05118         172 GDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPN  251 (283)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhh
Confidence            76 7899999999999999999999999887765554443211   0                            00112


Q ss_pred             CCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       306 ~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      .+..+.+||.+||.+||.+||++.+++.||||
T Consensus       252 ~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         252 ASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            35678999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=6.1e-42  Score=334.08  Aligned_cols=258  Identities=21%  Similarity=0.338  Sum_probs=204.2

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEE-----cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-C
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKD-----VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-E   84 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~   84 (426)
                      +.+..++|++++.||+|+||+||+|.+     ..+++.||||++....            .......+.+|+.+|..+ .
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~~   69 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA------------THSEHRALMSELKILIHIGH   69 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC------------ChHHHHHHHHHHHHHHhccC
Confidence            456677899999999999999999985     3567899999984321            112345688899999999 5


Q ss_pred             CCCcceeeeeeec-CCeEEEEEeccCCCChHHHHHHhc------------------------------------------
Q 014344           85 HPLLPRLRGVLST-DKFVGYAIDYCPGRDLHSLRKQQS------------------------------------------  121 (426)
Q Consensus        85 hp~iv~l~~~~~~-~~~~~lV~Ey~~gg~L~~l~~~~~------------------------------------------  121 (426)
                      ||||+++++++.. +..+++|||||++|+|.+++....                                          
T Consensus        70 h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (343)
T cd05103          70 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSAS  149 (343)
T ss_pred             CccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccccccc
Confidence            8999999998754 457899999999999999876432                                          


Q ss_pred             -----------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          122 -----------------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       122 -----------------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                                             ...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~  229 (343)
T cd05103         150 SGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI  229 (343)
T ss_pred             ccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence                                   123678888999999999999999999999999999999999999999999998765


Q ss_pred             CCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC
Q 014344          179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG  258 (426)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  258 (426)
                      .....                                                      ........+++.|+|||++.+
T Consensus       230 ~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~  255 (343)
T cd05103         230 YKDPD------------------------------------------------------YVRKGDARLPLKWMAPETIFD  255 (343)
T ss_pred             ccCcc------------------------------------------------------hhhcCCCCCCcceECcHHhcC
Confidence            32110                                                      001112235678999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          259 KGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       259 ~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ..++.++|||||||++|+|++ |..||........+...+..   .+.....++.+.+++.+||+.||.+|||+.+|++|
T Consensus       256 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         256 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999996 99999876543333332211   11122346789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=5.7e-42  Score=333.43  Aligned_cols=260  Identities=30%  Similarity=0.482  Sum_probs=208.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~   93 (426)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++.+...           .......+..|+.+++++ +||||+++++
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~~h~ni~~~~~   74 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-----------NATDAQRTFREIMFLQELGDHPNIVKLLN   74 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-----------cchhhhhhhHHHHHHHHhcCCCCccceee
Confidence            4579999999999999999999999999999998843211           112234566799999999 9999999999


Q ss_pred             eeecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           94 VLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        94 ~~~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++...  ...|+||||+. ++|..++...   .+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|
T Consensus        75 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d  150 (337)
T cd07852          75 VIKAENDKDIYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLAD  150 (337)
T ss_pred             eeccCCCceEEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEee
Confidence            98643  46899999997 5888877643   588999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+.......                                                   .......++||+.|+
T Consensus       151 ~g~~~~~~~~~~~~---------------------------------------------------~~~~~~~~~~~~~y~  179 (337)
T cd07852         151 FGLARSLSELEENP---------------------------------------------------ENPVLTDYVATRWYR  179 (337)
T ss_pred             ccchhccccccccc---------------------------------------------------cCcchhccccccccc
Confidence            99988664221000                                                   001223456899999


Q ss_pred             cchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------------------------------
Q 014344          252 APEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP------------------------------  300 (426)
Q Consensus       252 aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~------------------------------  300 (426)
                      |||++.+ ..++.++|+|||||++|+|++|+.||.+........++....                              
T Consensus       180 aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (337)
T cd07852         180 APEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKP  259 (337)
T ss_pred             CceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccc
Confidence            9998765 457889999999999999999999998776554433321110                              


Q ss_pred             --CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          301 --PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       301 --~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                        ......+..+.+||.+||+.||++|||+.+++.||||+.+
T Consensus       260 ~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         260 LDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             hhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence              0112346789999999999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=3.1e-41  Score=312.77  Aligned_cols=249  Identities=31%  Similarity=0.586  Sum_probs=212.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++.+.||+|++|.||++.+..+++.+++|++.....             .....+..|+.+++.++||+++.+++++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   67 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-------------EKKEKIINEIQILKKCKHPNIVKYYGSYL   67 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-------------hHHHHHHHHHHHHHhCCCCCEeEEEEEEe
Confidence            58999999999999999999998999999999854321             24567888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+...++++||++|++|.+++.... ..+++..+..++.|++.||.+||++|++||||+|+||+++.++.++|+|||.+.
T Consensus        68 ~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~  146 (253)
T cd05122          68 KKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSA  146 (253)
T ss_pred             cCCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccc
Confidence            9999999999999999999877643 458999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .......                                                         .....|+..|+|||.+
T Consensus       147 ~~~~~~~---------------------------------------------------------~~~~~~~~~~~~PE~~  169 (253)
T cd05122         147 QLSDTKA---------------------------------------------------------RNTMVGTPYWMAPEVI  169 (253)
T ss_pred             ccccccc---------------------------------------------------------ccceecCCcccCHHHH
Confidence            6532110                                                         1234588899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCC-C--CCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDLV-G--EPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~-~--~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      .+..++.++|+|||||++|+|++|+.||...+........... .+... .  .+..+.++|.+||+.||++|||+.+++
T Consensus       170 ~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l  249 (253)
T cd05122         170 NGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLL  249 (253)
T ss_pred             cCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            9888899999999999999999999999887555444333221 11111 2  267899999999999999999999999


Q ss_pred             cCCC
Q 014344          333 GHEF  336 (426)
Q Consensus       333 ~hp~  336 (426)
                      .|||
T Consensus       250 ~~~~  253 (253)
T cd05122         250 KHPF  253 (253)
T ss_pred             cCCC
Confidence            9998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1.6e-41  Score=323.15  Aligned_cols=251  Identities=23%  Similarity=0.338  Sum_probs=205.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      +|++.+.||+|+||.||+|.+..     ....+|+|++....            .......+.+|+.+++.+.||||+++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~iv~~   68 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA------------SSSELRDLLSEFNLLKQVNHPHVIKL   68 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC------------CHHHHHHHHHHHHHHhhCCCCCEeeE
Confidence            48899999999999999998753     23568999874322            11234678889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhc----------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQS----------------------EQMFSDDTIRFYAAELVLALEYLHNMGI  149 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~----------------------~~~l~~~~~~~~~~qil~aL~~LH~~gi  149 (426)
                      ++.+..+...+++|||+.+++|.+++....                      ...++...+..++.|++.||.|||++||
T Consensus        69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i  148 (290)
T cd05045          69 YGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKL  148 (290)
T ss_pred             EEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999999999999999876421                      1347889999999999999999999999


Q ss_pred             cccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCC
Q 014344          150 VYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDP  229 (426)
Q Consensus       150 iHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (426)
                      +||||||+|||+++++.+||+|||++.........                                             
T Consensus       149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------  183 (290)
T cd05045         149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY---------------------------------------------  183 (290)
T ss_pred             ehhhhhhheEEEcCCCcEEeccccccccccCccch---------------------------------------------
Confidence            99999999999999999999999998765321100                                             


Q ss_pred             CCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCC
Q 014344          230 PSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGE  306 (426)
Q Consensus       230 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~  306 (426)
                               .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+.+..+..  ..+.....
T Consensus       184 ---------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  254 (290)
T cd05045         184 ---------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENC  254 (290)
T ss_pred             ---------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCC
Confidence                     00112235678999999998889999999999999999998 9999998877665554432  22233456


Q ss_pred             CHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          307 PTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       307 ~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +..+.+||.+||+.+|.+||++.++++
T Consensus       255 ~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         255 SEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1.5e-41  Score=330.00  Aligned_cols=261  Identities=20%  Similarity=0.312  Sum_probs=213.2

Q ss_pred             CCCCCCCCCCcEEEeeecccCceEEEEEEEcCC-------CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHH
Q 014344            8 RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVES-------SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL   80 (426)
Q Consensus         8 ~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il   80 (426)
                      .+.+++...+|++++.||+|+||.||+|++...       +..||+|++....            .......+..|+.++
T Consensus         4 ~~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l   71 (334)
T cd05100           4 DPKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA------------TDKDLSDLVSEMEMM   71 (334)
T ss_pred             CcccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc------------CHHHHHHHHHHHHHH
Confidence            356778888999999999999999999987532       2368999874321            112356788899999


Q ss_pred             Hhc-CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHH
Q 014344           81 RNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLH  145 (426)
Q Consensus        81 ~~l-~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH  145 (426)
                      +++ +||||+++++++..+..+|++|||+.+|+|.+++....              ...++...+..++.||+.||.|||
T Consensus        72 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH  151 (334)
T cd05100          72 KMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA  151 (334)
T ss_pred             HhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            999 79999999999999999999999999999999887532              224777888999999999999999


Q ss_pred             HCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCC
Q 014344          146 NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRI  225 (426)
Q Consensus       146 ~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (426)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       152 ~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------  189 (334)
T cd05100         152 SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY------------------------------------------  189 (334)
T ss_pred             HCCeeccccccceEEEcCCCcEEECCcccceecccccc------------------------------------------
Confidence            99999999999999999999999999999876532110                                          


Q ss_pred             CCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CC
Q 014344          226 GPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PD  302 (426)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~  302 (426)
                                  ........++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+.+..+....  ..
T Consensus       190 ------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  257 (334)
T cd05100         190 ------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK  257 (334)
T ss_pred             ------------cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence                        000111234567999999999999999999999999999998 899999888777766654332  22


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ....+..+.+||.+||..+|.+||++.+++.+
T Consensus       258 ~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         258 PANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             CCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            33557889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-42  Score=339.85  Aligned_cols=259  Identities=26%  Similarity=0.363  Sum_probs=218.3

Q ss_pred             CCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCc---e-EEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc
Q 014344            8 RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSE---S-FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV   83 (426)
Q Consensus         8 ~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~-vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l   83 (426)
                      ++.|.|.-++..+.++||+|+||.||+++-+..+.   . ||+|....+.          ........++.+|+++|+++
T Consensus       149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~----------~~~~~~~~e~m~EArvMr~l  218 (474)
T KOG0194|consen  149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS----------ELTKEQIKEFMKEARVMRQL  218 (474)
T ss_pred             ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc----------cccHHHHHHHHHHHHHHHhC
Confidence            34678888999999999999999999999865422   3 8999874311          12235678999999999999


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      +|||||+++|+...+..+|+|||+|.||+|.++++.... .++..+...++.+.+.||+|||++++|||||-.+|+|++.
T Consensus       219 ~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~  297 (474)
T KOG0194|consen  219 NHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK  297 (474)
T ss_pred             CCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC
Confidence            999999999999999999999999999999999987654 5999999999999999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++.+||+||||++.-..-.                                                        .....
T Consensus       298 ~~~vKISDFGLs~~~~~~~--------------------------------------------------------~~~~~  321 (474)
T KOG0194|consen  298 KGVVKISDFGLSRAGSQYV--------------------------------------------------------MKKFL  321 (474)
T ss_pred             CCeEEeCccccccCCccee--------------------------------------------------------ecccc
Confidence            9999999999987542000                                                        00000


Q ss_pred             cccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHhc
Q 014344          244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC---RPPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~li~~~L~  319 (426)
                      .--...|+|||.+...-|++++|||||||++||+.+ |..||.+....+...+|..   +.+.....|..+..++.+|+.
T Consensus       322 ~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~  401 (474)
T KOG0194|consen  322 KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWK  401 (474)
T ss_pred             ccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhcc
Confidence            114567999999999999999999999999999997 8999999999998888843   233344667888999999999


Q ss_pred             cCCCCCCChHHHhc
Q 014344          320 KDPTKRIGVEEIKG  333 (426)
Q Consensus       320 ~dP~~R~s~~eil~  333 (426)
                      .+|++||++.++.+
T Consensus       402 ~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  402 KDPEDRPTMSTIKK  415 (474)
T ss_pred             CChhhccCHHHHHH
Confidence            99999999998875

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-41  Score=324.68  Aligned_cols=255  Identities=23%  Similarity=0.286  Sum_probs=204.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCC--------------ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHH
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESS--------------ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR   78 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~--------------~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   78 (426)
                      ++.++|++.+.||+|+||.||+|++..++              ..||+|++....            .......+.+|++
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~ei~   69 (295)
T cd05097           2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV------------TKTARNDFLKEIK   69 (295)
T ss_pred             CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC------------CHHHHHHHHHHHH
Confidence            45568999999999999999999875432              358999984321            1123456888999


Q ss_pred             HHHhcCCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc----------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014344           79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS----------EQMFSDDTIRFYAAELVLALEYLHNMG  148 (426)
Q Consensus        79 il~~l~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~----------~~~l~~~~~~~~~~qil~aL~~LH~~g  148 (426)
                      ++++++||||+++++++......++||||+.+++|.+++....          ...++...+..++.|++.||.|||++|
T Consensus        70 ~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  149 (295)
T cd05097          70 IMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN  149 (295)
T ss_pred             HHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999875432          113678889999999999999999999


Q ss_pred             CcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCC
Q 014344          149 IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPD  228 (426)
Q Consensus       149 iiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (426)
                      ++||||||+|||++.++.+||+|||++..+.....                                             
T Consensus       150 i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------  184 (295)
T cd05097         150 FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY---------------------------------------------  184 (295)
T ss_pred             eeccccChhhEEEcCCCcEEecccccccccccCcc---------------------------------------------
Confidence            99999999999999999999999999876532110                                             


Q ss_pred             CCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhc------C-
Q 014344          229 PPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY--GATPFRGSSRKETFYRILC------R-  299 (426)
Q Consensus       229 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~~~~i~~------~-  299 (426)
                               ........+++.|+|||++.+..++.++|+|||||++|+|++  |..||...+..+....+..      . 
T Consensus       185 ---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  255 (295)
T cd05097         185 ---------YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQ  255 (295)
T ss_pred             ---------eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhcccc
Confidence                     001122345778999999998889999999999999999987  7789988776554443321      0 


Q ss_pred             --CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          300 --PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       300 --~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                        .......+..+.+||.+||+.||++||++++|++
T Consensus       256 ~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         256 IYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             ccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence              1122235788999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.8e-41  Score=320.05  Aligned_cols=255  Identities=23%  Similarity=0.334  Sum_probs=210.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      +..++|++++.||+|+||.||+|+.+.     +.+.+|+|.+....            .......+..|++++++++|||
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~   69 (275)
T cd05046           2 FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK------------DENLQSEFRRELDMFRKLSHKN   69 (275)
T ss_pred             CChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc------------chHHHHHHHHHHHHHHhcCCcc
Confidence            445789999999999999999999754     34679999873321            1124567888999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCee
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE-------QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIM  160 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~-------~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiL  160 (426)
                      |+++++++......|+||||+++++|.+++.....       ..+++..+..++.||+.||+|||+.||+||||||+|||
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nil  149 (275)
T cd05046          70 VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCL  149 (275)
T ss_pred             eeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEE
Confidence            99999999999999999999999999999876542       15899999999999999999999999999999999999


Q ss_pred             eccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          161 IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       161 l~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                      ++.++.++|+|||++.......                                                       ...
T Consensus       150 i~~~~~~~l~~~~~~~~~~~~~-------------------------------------------------------~~~  174 (275)
T cd05046         150 VSSQREVKVSLLSLSKDVYNSE-------------------------------------------------------YYK  174 (275)
T ss_pred             EeCCCcEEEcccccccccCccc-------------------------------------------------------ccc
Confidence            9999999999999886432110                                                       011


Q ss_pred             ccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC---CCCCCCCHHHHHHHHH
Q 014344          241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP---PDLVGEPTPLRNLIRR  316 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~li~~  316 (426)
                      .....+++.|+|||.+.+..++.++|||||||++|+|++ |..||........+..+....   +.....+..+.++|.+
T Consensus       175 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  254 (275)
T cd05046         175 LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTR  254 (275)
T ss_pred             cCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHH
Confidence            123346788999999988888999999999999999998 889998777666665554222   1223557889999999


Q ss_pred             HhccCCCCCCChHHHhcC
Q 014344          317 LLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~h  334 (426)
                      ||..+|++||++.+++++
T Consensus       255 ~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         255 CWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HcCCCcccCCCHHHHHHH
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-43  Score=341.11  Aligned_cols=255  Identities=21%  Similarity=0.312  Sum_probs=211.8

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      ..|.+..+...++..||+|+||+||++++.   ..||||++....           ..+++.+.|.+|+.++++-+|.||
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~-----------pt~~qlqaFKnEVa~lkkTRH~NI  450 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDD-----------PTPEQLQAFKNEVAVLKKTRHENI  450 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccc---cceEEEEEecCC-----------CCHHHHHHHHHHHHHHhhcchhhh
Confidence            467888899999999999999999999874   379999995543           234578899999999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +-+.|++..+.. .||+.+|+|.+|+.+++... ..|.....+.|++||+.|+.|||.++|||||||..||++.+++.||
T Consensus       451 lLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVk  528 (678)
T KOG0193|consen  451 LLFMGACMNPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVK  528 (678)
T ss_pred             eeeehhhcCCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEE
Confidence            999999988887 99999999999999988665 3489999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++..-..-.                           +                           ........|..
T Consensus       529 IgDFGLatvk~~w~---------------------------g---------------------------~~q~~qp~gsi  554 (678)
T KOG0193|consen  529 IGDFGLATVKTRWS---------------------------G---------------------------EQQLEQPHGSL  554 (678)
T ss_pred             Eecccceeeeeeec---------------------------c---------------------------ccccCCCccch
Confidence            99999987532110                           0                           01112224788


Q ss_pred             CCccchhhcC---CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CC----CCCCCHHHHHHHHHHhc
Q 014344          249 EYVAPEIIEG---KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PD----LVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       249 ~y~aPE~~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~----~~~~~~~~~~li~~~L~  319 (426)
                      .|||||+++.   .+|++.+|||||||++|||++|..||...+....+..+-...  ++    ...++.++++|+..||.
T Consensus       555 lwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~  634 (678)
T KOG0193|consen  555 LWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWK  634 (678)
T ss_pred             hhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHh
Confidence            9999999974   568999999999999999999999999766665544332221  11    12456689999999999


Q ss_pred             cCCCCCCChHHHhc
Q 014344          320 KDPTKRIGVEEIKG  333 (426)
Q Consensus       320 ~dP~~R~s~~eil~  333 (426)
                      +++++||.+.+||.
T Consensus       635 ~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  635 FDREERPLFPQLLS  648 (678)
T ss_pred             cCcccCccHHHHHH
Confidence            99999999999986

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=2.6e-41  Score=315.48  Aligned_cols=247  Identities=26%  Similarity=0.358  Sum_probs=209.0

Q ss_pred             eeecccCceEEEEEEEcCC---CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecC
Q 014344           22 SALGRGAKGVVFLVKDVES---SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTD   98 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~   98 (426)
                      +.||+|+||.||+|.+...   +..||+|++.....            ....+.+..|+.+++.++|+||+++++++.+.
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   68 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS------------EEERKDFLKEARVMKKLGHPNVVRLLGVCTEE   68 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccc------------hhHHHHHHHHHHHHhhcCCCChheeeeeecCC
Confidence            4699999999999999866   88999999854321            11356788899999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           99 KFVGYAIDYCPGRDLHSLRKQQS-------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L~~l~~~~~-------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ..+++||||+++++|.+++....       ...+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~d  148 (262)
T cd00192          69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISD  148 (262)
T ss_pred             CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcc
Confidence            99999999999999999987641       24599999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||.+........                                                      ........+++.|+
T Consensus       149 fg~~~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~  174 (262)
T cd00192         149 FGLSRDVYDDDY------------------------------------------------------YRKKTGGKLPIRWM  174 (262)
T ss_pred             cccccccccccc------------------------------------------------------cccccCCCcCcccc
Confidence            999876642210                                                      01122345788999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||.+....++.++|+|||||++|+|++ |..||......+....+...  .......+..+.++|.+||..+|++|||+
T Consensus       175 aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  254 (262)
T cd00192         175 APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTF  254 (262)
T ss_pred             CHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCH
Confidence            9999998889999999999999999998 69999998877776666532  22234557889999999999999999999


Q ss_pred             HHHhcC
Q 014344          329 EEIKGH  334 (426)
Q Consensus       329 ~eil~h  334 (426)
                      .+++++
T Consensus       255 ~~l~~~  260 (262)
T cd00192         255 SELVER  260 (262)
T ss_pred             HHHHHh
Confidence            999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=2.9e-41  Score=315.11  Aligned_cols=250  Identities=21%  Similarity=0.292  Sum_probs=206.7

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      +..+|++.+.||+|+||.||+|.+. ++..+|+|++.....              ....+..|+++++.++||+++++++
T Consensus         2 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~   66 (256)
T cd05112           2 HPSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM--------------SEEDFIEEAQVMMKLSHPKLVQLYG   66 (256)
T ss_pred             ChhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC--------------CHHHHHHHHHHHHhCCCCCeeeEEE
Confidence            4568999999999999999999875 467899998743211              1235677999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++......|+||||+.+++|.+++.... ..++++.++.++.|++.||+|||+.|++||||||+||+++.++.++|+|||
T Consensus        67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g  145 (256)
T cd05112          67 VCTERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFG  145 (256)
T ss_pred             EEccCCceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCc
Confidence            9999999999999999999999876543 358899999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++........                                                       .......++..|+||
T Consensus       146 ~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~~aP  170 (256)
T cd05112         146 MTRFVLDDQY-------------------------------------------------------TSSTGTKFPVKWSSP  170 (256)
T ss_pred             ceeecccCcc-------------------------------------------------------cccCCCccchhhcCH
Confidence            9875421100                                                       001112356789999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |.+.+..++.++|+|||||++|+|++ |+.||...........+...  .......+..+.+|+.+||..+|.+|||+.+
T Consensus       171 e~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~  250 (256)
T cd05112         171 EVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSL  250 (256)
T ss_pred             hHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHH
Confidence            99998889999999999999999998 99999887776666555422  1222335788999999999999999999999


Q ss_pred             HhcC
Q 014344          331 IKGH  334 (426)
Q Consensus       331 il~h  334 (426)
                      ++++
T Consensus       251 ~l~~  254 (256)
T cd05112         251 LLHQ  254 (256)
T ss_pred             HHHh
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2.2e-41  Score=323.21  Aligned_cols=254  Identities=22%  Similarity=0.287  Sum_probs=203.5

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcC----------------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHH
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVE----------------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ   77 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~----------------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   77 (426)
                      ..++|++.+.||+|+||.||+|.+..                ++..+|+|++....            .......+..|+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~------------~~~~~~~~~~E~   70 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA------------NKNARNDFLKEI   70 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC------------CHHHHHHHHHHH
Confidence            34679999999999999999996532                34469999884321            112345788899


Q ss_pred             HHHHhcCCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014344           78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE---------QMFSDDTIRFYAAELVLALEYLHNMG  148 (426)
Q Consensus        78 ~il~~l~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~---------~~l~~~~~~~~~~qil~aL~~LH~~g  148 (426)
                      .+|+.++||||+++++++..+...|+||||+.+++|.+++.....         ..++...+..++.||+.||+|||+.|
T Consensus        71 ~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  150 (296)
T cd05095          71 KIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN  150 (296)
T ss_pred             HHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999999999999999999999999999999998865421         23677889999999999999999999


Q ss_pred             CcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCC
Q 014344          149 IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPD  228 (426)
Q Consensus       149 iiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (426)
                      |+||||||+|||++.++.++|+|||++..+.....                                             
T Consensus       151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------  185 (296)
T cd05095         151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY---------------------------------------------  185 (296)
T ss_pred             eecccCChheEEEcCCCCEEeccCcccccccCCcc---------------------------------------------
Confidence            99999999999999999999999999876532110                                             


Q ss_pred             CCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHh---------
Q 014344          229 PPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY--GATPFRGSSRKETFYRIL---------  297 (426)
Q Consensus       229 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~--g~~pf~~~~~~~~~~~i~---------  297 (426)
                               ........+++.|+|||+..+..++.++|+|||||++|||++  |..||...+..+......         
T Consensus       186 ---------~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  256 (296)
T cd05095         186 ---------YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQ  256 (296)
T ss_pred             ---------eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhcccc
Confidence                     001112235678999999888889999999999999999998  789998776655443221         


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          298 CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       298 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ...+.....+..+.+||.+||+.||.+||++.+|++
T Consensus       257 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         257 VYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             ccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            011223345788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-42  Score=346.38  Aligned_cols=258  Identities=26%  Similarity=0.464  Sum_probs=228.4

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      ..-..|+|..+||.|.+|.||+++.+.+++..|+|++....              +.-.++..|++||+.+. |||++.+
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~--------------d~deEiE~eynil~~~~~hpnv~~f   81 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE--------------DEEEEIELEYNMLKKYSHHPNVATF   81 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc--------------cccHHHHHHHHHHHhccCCCCcceE
Confidence            34467999999999999999999999999999999985432              23456777999999885 9999999


Q ss_pred             eeeee-----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           92 RGVLS-----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        92 ~~~~~-----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      +++|.     .++.+|||||||.||+..++++...+..+.+..+..|++.++.||.+||.+.++|||||-.|||++.+|.
T Consensus        82 yg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~  161 (953)
T KOG0587|consen   82 YGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAE  161 (953)
T ss_pred             EEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCc
Confidence            99984     4678999999999999999999887888999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      |||+|||++..+..+                                                        ..+.++++|
T Consensus       162 VKLvDFGvSaQldsT--------------------------------------------------------~grRnT~iG  185 (953)
T KOG0587|consen  162 VKLVDFGVSAQLDST--------------------------------------------------------VGRRNTFIG  185 (953)
T ss_pred             EEEeeeeeeeeeecc--------------------------------------------------------cccccCcCC
Confidence            999999999887422                                                        246788999


Q ss_pred             CCCCccchhhcCC-----CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCHHHHHHHHHH
Q 014344          247 TEEYVAPEIIEGK-----GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV----GEPTPLRNLIRRL  317 (426)
Q Consensus       247 t~~y~aPE~~~~~-----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~li~~~  317 (426)
                      ||.|||||++.+.     .|+..+|+||||++..||.-|.+|+.+..+...+..|-..||..+    .++..+.+||..|
T Consensus       186 tP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~c  265 (953)
T KOG0587|consen  186 TPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTC  265 (953)
T ss_pred             CcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHH
Confidence            9999999999874     367899999999999999999999999999988888877665543    3467789999999


Q ss_pred             hccCCCCCCChHHHhcCCCcCCC
Q 014344          318 LEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       318 L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      |.+|..+||+..++|.|||++..
T Consensus       266 L~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  266 LVKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             HhhccccCcchhhhccCCccccc
Confidence            99999999999999999999854

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=2.2e-41  Score=315.82  Aligned_cols=244  Identities=24%  Similarity=0.326  Sum_probs=204.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +.+.+|++.+.||+|+||.||++.  .+++.||+|++....               ....+.+|+.+++.++||||++++
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~---------------~~~~~~~e~~~l~~~~~~~i~~~~   65 (254)
T cd05083           3 LNLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV---------------TAQAFLEETAVMTKLHHKNLVRLL   65 (254)
T ss_pred             ccHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc---------------hHHHHHHHHHHHHhCCCCCcCeEE
Confidence            456789999999999999999986  578899999874321               234677899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++..+ ..|+||||+.+++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+||
T Consensus        66 ~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Df  144 (254)
T cd05083          66 GVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDF  144 (254)
T ss_pred             EEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCC
Confidence            998654 4799999999999999987665556899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                           .....+..|+|
T Consensus       145 g~~~~~~~~~-----------------------------------------------------------~~~~~~~~y~~  165 (254)
T cd05083         145 GLARVGSMGV-----------------------------------------------------------DNSKLPVKWTA  165 (254)
T ss_pred             ccceeccccC-----------------------------------------------------------CCCCCCceecC
Confidence            9886532110                                                           01123567999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||.+.+..++.++|+|||||++|+|++ |++||...+..+....+...  .......+..+.++|++||..+|.+||+++
T Consensus       166 pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  245 (254)
T cd05083         166 PEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFH  245 (254)
T ss_pred             HHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHH
Confidence            999998889999999999999999997 99999988876665555432  222335578899999999999999999999


Q ss_pred             HHhc
Q 014344          330 EIKG  333 (426)
Q Consensus       330 eil~  333 (426)
                      +++.
T Consensus       246 ~l~~  249 (254)
T cd05083         246 KLRE  249 (254)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-41  Score=321.52  Aligned_cols=250  Identities=27%  Similarity=0.465  Sum_probs=205.7

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLS   96 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~   96 (426)
                      |++.+.||+|++|+||+|....+++.||||.+......            .......+|+..++++. ||||+++++++.
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~------------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   68 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS------------WEECMNLREVKSLRKLNEHPNIVKLKEVFR   68 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc------------hhHHHHHHHHHHHHhccCCCCchhHHHHhh
Confidence            78999999999999999999989999999988543210            11123345888999999 999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+...|+||||+ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        69 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~  147 (283)
T cd07830          69 ENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAR  147 (283)
T ss_pred             cCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccce
Confidence            999999999999 7899888776554568999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                         ......|+..|+|||++
T Consensus       148 ~~~~~~---------------------------------------------------------~~~~~~~~~~~~aPE~~  170 (283)
T cd07830         148 EIRSRP---------------------------------------------------------PYTDYVSTRWYRAPEIL  170 (283)
T ss_pred             eccCCC---------------------------------------------------------CcCCCCCcccccCceee
Confidence            543211                                                         11223578899999988


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC----------------------------CCC
Q 014344          257 EG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP----------------------------DLV  304 (426)
Q Consensus       257 ~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~----------------------------~~~  304 (426)
                      .+ ..++.++|+||||+++|+|++|++||...+..+.+..+..   .+.                            ...
T Consensus       171 ~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (283)
T cd07830         171 LRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIP  250 (283)
T ss_pred             ecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcc
Confidence            54 4578999999999999999999999988776555443321   100                            011


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ..+..+.+||++||+.+|++|||++|++.||||
T Consensus       251 ~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         251 NASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            225678999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=4.4e-41  Score=314.92  Aligned_cols=251  Identities=20%  Similarity=0.296  Sum_probs=207.2

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ++..++|++.+.||+|+||.||+|.+. .+..+|+|.+....              .....+..|+.+++.++|+||+++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~--------------~~~~~~~~e~~~l~~l~~~~i~~~   66 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS--------------MSVEAFLAEANVMKTLQHDKLVKL   66 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh--------------hHHHHHHHHHHHHHhcCCCCcceE
Confidence            456778999999999999999999864 45679999874321              123467789999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++.+.. ...|++|||+++++|.+++.......++...+..++.||+.||.|||+.|++||||||+||+++.++.+||+|
T Consensus        67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d  145 (260)
T cd05073          67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD  145 (260)
T ss_pred             EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECC
Confidence            999877 7889999999999999998775555688899999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+.....                                                       .......++..|+
T Consensus       146 ~~~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y~  170 (260)
T cd05073         146 FGLARVIEDNEY-------------------------------------------------------TAREGAKFPIKWT  170 (260)
T ss_pred             CcceeeccCCCc-------------------------------------------------------ccccCCccccccc
Confidence            999876532110                                                       0001123567799


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||++.+..++.++|+|||||++|++++ |..||.+.+.......+....  +.....+..+.+++.+||..+|++||++
T Consensus       171 ~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  250 (260)
T cd05073         171 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTF  250 (260)
T ss_pred             CHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCH
Confidence            9999998889999999999999999998 999999887766655554332  2233557889999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      .+++.
T Consensus       251 ~~l~~  255 (260)
T cd05073         251 EYIQS  255 (260)
T ss_pred             HHHHH
Confidence            98864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-42  Score=322.73  Aligned_cols=251  Identities=30%  Similarity=0.464  Sum_probs=208.4

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |++.+.||+|++|.||+|....+++.||+|++.....           .......+..|+.+++.++||||+++++++..
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-----------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   69 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-----------EEGIPSTALREISLLKELKHPNIVKLLDVIHT   69 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-----------cccccHHHHHHHHHHHhcCCCCHHHHHhhhhc
Confidence            6788999999999999999999999999999855421           12234567789999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ....++||||+. ++|.+++.... ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++..
T Consensus        70 ~~~~~~v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~  147 (282)
T cd07829          70 ERKLYLVFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARA  147 (282)
T ss_pred             CCceEEEecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccc
Confidence            999999999997 58999887653 3599999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      ......                                                        ......++..|+|||.+.
T Consensus       148 ~~~~~~--------------------------------------------------------~~~~~~~~~~~~aPE~~~  171 (282)
T cd07829         148 FGIPLR--------------------------------------------------------TYTHEVVTLWYRAPEILL  171 (282)
T ss_pred             cCCCcc--------------------------------------------------------ccCccccCcCcCChHHhc
Confidence            532110                                                        111223577899999987


Q ss_pred             CC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C---------------------------CCCCCC
Q 014344          258 GK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P---------------------------PDLVGE  306 (426)
Q Consensus       258 ~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~---------------------------~~~~~~  306 (426)
                      +. .++.++|+|||||++|+|++|++||.+.+....+.++...   +                           ......
T Consensus       172 ~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (282)
T cd07829         172 GSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRL  251 (282)
T ss_pred             CCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccc
Confidence            76 7889999999999999999999999887765554433210   0                           001123


Q ss_pred             CHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       307 ~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      +..+.++|.+||..||++||++.+++.||||
T Consensus       252 ~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         252 DPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            5679999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.6e-41  Score=326.25  Aligned_cols=252  Identities=27%  Similarity=0.419  Sum_probs=208.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ..|...+.||+|+||.||+|++..+++.+|+|.+.....          .......++..|+.+++.++|+|++++++++
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   84 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK----------QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY   84 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc----------cChHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            448889999999999999999999999999998853211          1112345677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ......|+||||+. |+|.+++.... ..+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++
T Consensus        85 ~~~~~~~lv~e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~  162 (308)
T cd06634          85 LREHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA  162 (308)
T ss_pred             EcCCeeEEEEEccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccc
Confidence            99999999999996 67777665433 45899999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .....                                                            .....|++.|+|||.
T Consensus       163 ~~~~~------------------------------------------------------------~~~~~~~~~y~aPE~  182 (308)
T cd06634         163 SIMAP------------------------------------------------------------ANXFVGTPYWMAPEV  182 (308)
T ss_pred             eeecC------------------------------------------------------------cccccCCccccCHHH
Confidence            65421                                                            112358889999999


Q ss_pred             hcC---CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CC--CCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          256 IEG---KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-PD--LVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       256 ~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~--~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      +.+   ..++.++|||||||++|+|++|..||...+..+....+.... +.  ....+..+.+||.+||..+|.+||+++
T Consensus       183 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~  262 (308)
T cd06634         183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE  262 (308)
T ss_pred             HhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHH
Confidence            853   457889999999999999999999998776655544443322 11  224577899999999999999999999


Q ss_pred             HHhcCCCcCC
Q 014344          330 EIKGHEFFKG  339 (426)
Q Consensus       330 eil~hp~f~~  339 (426)
                      +++.|||+..
T Consensus       263 ~ll~~~~~~~  272 (308)
T cd06634         263 VLLKHRFVLR  272 (308)
T ss_pred             HHhhCccccc
Confidence            9999999964

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.6e-42  Score=349.90  Aligned_cols=257  Identities=25%  Similarity=0.352  Sum_probs=219.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      ..++..++.++.++||+|+||+||+|+...     ....||||.++..            ...+...+|++|+++|..|+
T Consensus       480 ~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~------------a~~~~~~dF~REaeLla~l~  547 (774)
T KOG1026|consen  480 VLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK------------AENQARQDFRREAELLAELQ  547 (774)
T ss_pred             eeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc------------ccHHHHHHHHHHHHHHHhcc
Confidence            556788899999999999999999998642     3457999988433            23346789999999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE------------QMFSDDTIRFYAAELVLALEYLHNMGIVYR  152 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~------------~~l~~~~~~~~~~qil~aL~~LH~~giiHr  152 (426)
                      |||||+|+|++..++.+|+|+|||..|||..+++....            .+++..+...++.||+.|++||-++.+|||
T Consensus       548 H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHR  627 (774)
T KOG1026|consen  548 HPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHR  627 (774)
T ss_pred             CCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCccccc
Confidence            99999999999999999999999999999999875421            128889999999999999999999999999


Q ss_pred             CCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 014344          153 DLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSR  232 (426)
Q Consensus       153 DlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (426)
                      ||..+|+||.++..|||+||||++......-                                                 
T Consensus       628 DLATRNCLVge~l~VKIsDfGLsRdiYssDY-------------------------------------------------  658 (774)
T KOG1026|consen  628 DLATRNCLVGENLVVKISDFGLSRDIYSSDY-------------------------------------------------  658 (774)
T ss_pred             chhhhhceeccceEEEecccccchhhhhhhh-------------------------------------------------
Confidence            9999999999999999999999997753220                                                 


Q ss_pred             CCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHH
Q 014344          233 SDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTP  309 (426)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~  309 (426)
                           .+....-.-..+||+||.|.-..|+.+|||||+||+|||+.+ |..||.+.+..+....|....  +-+.++|..
T Consensus       659 -----Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~  733 (774)
T KOG1026|consen  659 -----YKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTE  733 (774)
T ss_pred             -----hcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHH
Confidence                 001101124678999999999999999999999999999985 999999999999988886443  344567999


Q ss_pred             HHHHHHHHhccCCCCCCChHHHh
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      +.+||..||+.+|.+||++.||-
T Consensus       734 vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  734 VYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             HHHHHHHHhhcCcccCCCHHHHH
Confidence            99999999999999999999984

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=5.2e-42  Score=317.09  Aligned_cols=229  Identities=30%  Similarity=0.428  Sum_probs=187.8

Q ss_pred             cCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEEEEe
Q 014344           27 GAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAID  106 (426)
Q Consensus        27 G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~E  106 (426)
                      |.+|.||+|+++.+++.||+|++.+..                  ....|...+....||||+++++++......|+|||
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   65 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS------------------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQ   65 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh------------------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEe
Confidence            899999999999999999999985432                  11224455556679999999999999999999999


Q ss_pred             ccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCC
Q 014344          107 YCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS  186 (426)
Q Consensus       107 y~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~  186 (426)
                      |++|++|.+++....  .+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++..+...     
T Consensus        66 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----  138 (237)
T cd05576          66 HAEGGKLWSHISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----  138 (237)
T ss_pred             cCCCCCHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----
Confidence            999999999876543  4899999999999999999999999999999999999999999999999987654311     


Q ss_pred             cchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhH
Q 014344          187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVD  266 (426)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  266 (426)
                                                                            .....++..|+|||.+.+..++.++|
T Consensus       139 ------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~D  164 (237)
T cd05576         139 ------------------------------------------------------CDGEAVENMYCAPEVGGISEETEACD  164 (237)
T ss_pred             ------------------------------------------------------cccCCcCccccCCcccCCCCCCchhh
Confidence                                                                  11123567799999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCCh-----HHHhcCCCc
Q 014344          267 WWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFF  337 (426)
Q Consensus       267 iwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~-----~eil~hp~f  337 (426)
                      +||+||++|+|++|+.||.........   ..........+..+++||.+||+.||++|+++     +++++||||
T Consensus       165 vwslG~il~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         165 WWSLGAILFELLTGKTLVECHPSGINT---HTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHHHHHHHHHHCcchhhcCchhccc---ccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            999999999999999988643321100   00111112347789999999999999999986     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.7e-41  Score=317.05  Aligned_cols=239  Identities=22%  Similarity=0.238  Sum_probs=189.9

Q ss_pred             eeecccCceEEEEEEEcC------------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           22 SALGRGAKGVVFLVKDVE------------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~------------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      +.||+|+||.||++....            ....+|+|++....             ......+..|+.+++.++||||+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-------------~~~~~~~~~~~~~l~~l~hp~iv   67 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-------------RDISLAFFETASMMRQVSHKHIV   67 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-------------hhHHHHHHHHHHHHHhCCCCCEe
Confidence            368999999999998432            22358888874321             12334677789999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc---
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH---  166 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~---  166 (426)
                      ++++++..+...++||||+++++|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.   
T Consensus        68 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~  146 (262)
T cd05077          68 LLYGVCVRDVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGE  146 (262)
T ss_pred             eEEEEEecCCCCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCC
Confidence            99999999999999999999999988876543 45899999999999999999999999999999999999987664   


Q ss_pred             ----EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          167 ----IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       167 ----ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                          ++++|||++.....                                                            ..
T Consensus       147 ~~~~~~l~d~g~~~~~~~------------------------------------------------------------~~  166 (262)
T cd05077         147 CGPFIKLSDPGIPITVLS------------------------------------------------------------RQ  166 (262)
T ss_pred             CCceeEeCCCCCCccccC------------------------------------------------------------cc
Confidence                89999998765421                                                            11


Q ss_pred             ccccCCCCccchhhc-CCCCChhhHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhcc
Q 014344          243 SFVGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~  320 (426)
                      ..+|+..|+|||++. +..++.++|||||||++|+|+ .|..||......+...............+..+.+||.+||+.
T Consensus       167 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  246 (262)
T cd05077         167 ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNY  246 (262)
T ss_pred             cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCC
Confidence            235788899999987 567899999999999999998 589999876554432211111122223357789999999999


Q ss_pred             CCCCCCChHHHhcC
Q 014344          321 DPTKRIGVEEIKGH  334 (426)
Q Consensus       321 dP~~R~s~~eil~h  334 (426)
                      ||.+||++.+|+.+
T Consensus       247 dp~~Rp~~~~il~~  260 (262)
T cd05077         247 DPNQRPFFRAIMRD  260 (262)
T ss_pred             ChhhCcCHHHHHHh
Confidence            99999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=7.2e-42  Score=320.00  Aligned_cols=239  Identities=21%  Similarity=0.260  Sum_probs=191.2

Q ss_pred             eeecccCceEEEEEEEcCCCc-------eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           22 SALGRGAKGVVFLVKDVESSE-------SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~-------~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +.||+|+||+||+|.+...+.       .+|+|++....             ....+.+..|+.+++.++||||++++++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-------------~~~~~~~~~e~~~l~~~~h~~iv~~~~~   67 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-------------RNYSESFFEAASMMSQLSHKHLVLNYGV   67 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh-------------HHHHHHHHHHHHHHHhCCCCChhheeeE
Confidence            368999999999999865543       37777763321             1234567789999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc--------
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH--------  166 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~--------  166 (426)
                      +..+...++||||+.+|+|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.++.        
T Consensus        68 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~  146 (258)
T cd05078          68 CVCGDESIMVQEYVKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPF  146 (258)
T ss_pred             EEeCCCcEEEEecCCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCce
Confidence            9999999999999999999999875443 5899999999999999999999999999999999999987765        


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      ++++|||++.....                                                            .....+
T Consensus       147 ~~l~d~g~~~~~~~------------------------------------------------------------~~~~~~  166 (258)
T cd05078         147 IKLSDPGISITVLP------------------------------------------------------------KEILLE  166 (258)
T ss_pred             EEecccccccccCC------------------------------------------------------------chhccc
Confidence            68999998754321                                                            112357


Q ss_pred             CCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          247 TEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYG-ATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       247 t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      ++.|+|||++.+ ..++.++|||||||++|+|++| .+||...+..................+..+.+||.+||+.||++
T Consensus       167 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  246 (258)
T cd05078         167 RIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDF  246 (258)
T ss_pred             cCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhh
Confidence            888999999987 4578999999999999999998 57776665544332222222222234578999999999999999


Q ss_pred             CCChHHHhcC
Q 014344          325 RIGVEEIKGH  334 (426)
Q Consensus       325 R~s~~eil~h  334 (426)
                      |||+++|++.
T Consensus       247 Rps~~~il~~  256 (258)
T cd05078         247 RPSFRAIIRD  256 (258)
T ss_pred             CCCHHHHHHh
Confidence            9999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=5e-41  Score=320.65  Aligned_cols=274  Identities=16%  Similarity=0.182  Sum_probs=198.3

Q ss_pred             CCCCCCCCCCCCcEEEeeecccCceEEEEEEEcCC---CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh
Q 014344            6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVES---SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN   82 (426)
Q Consensus         6 ~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~   82 (426)
                      ++.+...+.-.+|++.+.||+|+||+||+|.+..+   +..+|+|+..............  ...........+...+..
T Consensus         2 ~~~~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~   79 (294)
T PHA02882          2 EGIPLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLV--YNNIYDIDKIALWKNIHN   79 (294)
T ss_pred             CCeeeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHH--HHhhhhHHHHHHHHHhcc
Confidence            34445556667899999999999999999998877   6778888643211000000000  000001112234445667


Q ss_pred             cCCCCcceeeeeeecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCC
Q 014344           83 VEHPLLPRLRGVLSTDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPEN  158 (426)
Q Consensus        83 l~hp~iv~l~~~~~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~N  158 (426)
                      ++|++++.++++.....    ..+++++++. .++.+++...  ..+++..++.++.|++.||+|||++||+||||||+|
T Consensus        80 ~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~N  156 (294)
T PHA02882         80 IDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPEN  156 (294)
T ss_pred             CCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            78999999998765443    4578888874 5666665543  236788899999999999999999999999999999


Q ss_pred             eeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          159 IMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS  238 (426)
Q Consensus       159 iLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (426)
                      ||++.++.++|+|||+|+.+........                                                 ...
T Consensus       157 ill~~~~~~~l~DFGla~~~~~~~~~~~-------------------------------------------------~~~  187 (294)
T PHA02882        157 IMVDGNNRGYIIDYGIASHFIIHGKHIE-------------------------------------------------YSK  187 (294)
T ss_pred             EEEcCCCcEEEEEcCCceeeccCCcccc-------------------------------------------------ccc
Confidence            9999999999999999987642211000                                                 000


Q ss_pred             CCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHHhcCCCCCCCCCHH
Q 014344          239 EKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE---------TFYRILCRPPDLVGEPTP  309 (426)
Q Consensus       239 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---------~~~~i~~~~~~~~~~~~~  309 (426)
                      .......||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+...         ...++..........+..
T Consensus       188 ~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (294)
T PHA02882        188 EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKF  267 (294)
T ss_pred             ccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHH
Confidence            11233469999999999999999999999999999999999999998773221         122233233334556788


Q ss_pred             HHHHHHHHhccCCCCCCChHHHhc
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+++..|+..+|++||++++|++
T Consensus       268 ~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        268 IYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHHHHhCCCCCCCCHHHHHH
Confidence            999999999999999999999875

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=6e-41  Score=313.12  Aligned_cols=246  Identities=22%  Similarity=0.321  Sum_probs=204.0

Q ss_pred             eeecccCceEEEEEEEcC-CCc--eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecC
Q 014344           22 SALGRGAKGVVFLVKDVE-SSE--SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTD   98 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~-~~~--~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~   98 (426)
                      +.||+|++|.||+|.+.. +++  .||||++......            ...+.+..|+.++++++||||+++++.+.. 
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-   67 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------------DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-   67 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------------HHHHHHHHHHHHHhhcCCCCccceeEEEcC-
Confidence            468999999999999865 333  6999998554321            345788899999999999999999999988 


Q ss_pred             CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344           99 KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      ...++||||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++..+
T Consensus        68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~  147 (257)
T cd05040          68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRAL  147 (257)
T ss_pred             CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccc
Confidence            89999999999999999987654356899999999999999999999999999999999999999999999999998876


Q ss_pred             CCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC
Q 014344          179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG  258 (426)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  258 (426)
                      ......                                                     ........++..|+|||.+.+
T Consensus       148 ~~~~~~-----------------------------------------------------~~~~~~~~~~~~y~~pE~~~~  174 (257)
T cd05040         148 PQNEDH-----------------------------------------------------YVMEEHLKVPFAWCAPESLRT  174 (257)
T ss_pred             cccccc-----------------------------------------------------eecccCCCCCceecCHHHhcc
Confidence            321100                                                     000112346788999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          259 KGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       259 ~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ..++.++|||||||++|+|++ |..||...+..+....+....   ......+..+.+++.+||..+|++||++.+++.
T Consensus       175 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         175 RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            899999999999999999998 999998888777666554322   222345788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=5.5e-41  Score=316.13  Aligned_cols=243  Identities=23%  Similarity=0.321  Sum_probs=198.4

Q ss_pred             eeecccCceEEEEEEEcCCCc--eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecC
Q 014344           22 SALGRGAKGVVFLVKDVESSE--SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTD   98 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~--~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~   98 (426)
                      +.||+|+||.||+|++..++.  .+|+|.+....            .......+..|+.++.++ +||||+++++++...
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   68 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA------------SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR   68 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC------------CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC
Confidence            368999999999999988776  46888774211            112345678899999999 799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           99 KFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      ..+|+||||+++++|.+++....              ...+++..++.++.|++.||+|||+.|++||||||+|||++.+
T Consensus        69 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~  148 (270)
T cd05047          69 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN  148 (270)
T ss_pred             CCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC
Confidence            99999999999999999986532              1247899999999999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||++.......                                                         .....
T Consensus       149 ~~~kl~dfgl~~~~~~~~---------------------------------------------------------~~~~~  171 (270)
T cd05047         149 YVAKIADFGLSRGQEVYV---------------------------------------------------------KKTMG  171 (270)
T ss_pred             CeEEECCCCCccccchhh---------------------------------------------------------hccCC
Confidence            999999999875321000                                                         00111


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccC
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~d  321 (426)
                      ..+..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+..+.+..+....  ......+.++.+|+.+||..+
T Consensus       172 ~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  251 (270)
T cd05047         172 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK  251 (270)
T ss_pred             CCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccC
Confidence            24567999999998889999999999999999996 999998887776666554321  222345678999999999999


Q ss_pred             CCCCCChHHHhc
Q 014344          322 PTKRIGVEEIKG  333 (426)
Q Consensus       322 P~~R~s~~eil~  333 (426)
                      |.+|||+.+++.
T Consensus       252 p~~Rps~~~il~  263 (270)
T cd05047         252 PYERPSFAQILV  263 (270)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999975

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.1e-41  Score=313.32  Aligned_cols=244  Identities=21%  Similarity=0.295  Sum_probs=199.5

Q ss_pred             eeecccCceEEEEEEEcCCC---ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecC
Q 014344           22 SALGRGAKGVVFLVKDVESS---ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTD   98 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~---~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~   98 (426)
                      ++||+|+||.||+|....++   ..+|+|.+......            ...+.+..|+.+++.++||||+++++++. .
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~   67 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA------------AGKKEFLREASVMAQLDHPCIVRLIGVCK-G   67 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch------------HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-C
Confidence            47999999999999876544   78999998543221            23456788999999999999999999876 4


Q ss_pred             CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344           99 KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      ...++||||+.+++|.+++....  .+++..+..++.|++.||+|||+.|++||||||+|||++.++.+||+|||++..+
T Consensus        68 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~  145 (257)
T cd05060          68 EPLMLVMELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRAL  145 (257)
T ss_pred             CceEEEEEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEecccccccee
Confidence            56799999999999999987654  5899999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC
Q 014344          179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG  258 (426)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  258 (426)
                      .......                                                     .......++..|+|||.+.+
T Consensus       146 ~~~~~~~-----------------------------------------------------~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05060         146 GAGSDYY-----------------------------------------------------RATTAGRWPLKWYAPECINY  172 (257)
T ss_pred             ecCCccc-----------------------------------------------------ccccCccccccccCHHHhcC
Confidence            3221000                                                     00011124567999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          259 KGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       259 ~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ..++.++|||||||++|+|++ |.+||...+..+....+....  +.....+..++++|.+||..+|++||++.++++
T Consensus       173 ~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         173 GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999999999999999999997 999998887766655554332  233355788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2e-42  Score=357.73  Aligned_cols=270  Identities=27%  Similarity=0.412  Sum_probs=205.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|+.+..||+||||.||+|+.+-+|+.||||.+.... .           ...+..+.+|+.+|.+|+|||||+++..
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s-----------~~~~skI~rEVk~LArLnHpNVVRYysA  545 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-S-----------DKLYSKILREVKLLARLNHPNVVRYYSA  545 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-H-----------HHHHHHHHHHHHHHhhcCCcceeeeehh
Confidence            357899999999999999999999999999999985443 1           2356789999999999999999999964


Q ss_pred             eec-----------------------------------------------------------------------------
Q 014344           95 LST-----------------------------------------------------------------------------   97 (426)
Q Consensus        95 ~~~-----------------------------------------------------------------------------   97 (426)
                      |..                                                                             
T Consensus       546 WVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~de  625 (1351)
T KOG1035|consen  546 WVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDE  625 (1351)
T ss_pred             hhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccc
Confidence            411                                                                             


Q ss_pred             ----------------------------------C--------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHH
Q 014344           98 ----------------------------------D--------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA  135 (426)
Q Consensus        98 ----------------------------------~--------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~  135 (426)
                                                        +        ..+||-||||+..+|.++++++.... ....++.+++
T Consensus       626 dg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFr  704 (1351)
T KOG1035|consen  626 DGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFR  704 (1351)
T ss_pred             cccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHH
Confidence                                              0        24799999999888888887654211 4788999999


Q ss_pred             HHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCC
Q 014344          136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGIS  215 (426)
Q Consensus       136 qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (426)
                      ||+.||.|+|++|||||||||.||++++++.|||+|||+++........     ...               .       
T Consensus       705 eIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~-----~d~---------------~-------  757 (1351)
T KOG1035|consen  705 EILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLES-----IDQ---------------D-------  757 (1351)
T ss_pred             HHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhh-----Hhh---------------c-------
Confidence            9999999999999999999999999999999999999999874310000     000               0       


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC---CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 014344          216 LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG---HDFAVDWWSLGVVLHEMLYGATPFRGSSRKET  292 (426)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  292 (426)
                                 ..+-.+.........++.+||--|+|||++.+..   |+.++|+||||+|++||+   .||...-....
T Consensus       758 -----------~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~  823 (1351)
T KOG1035|consen  758 -----------LSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERAS  823 (1351)
T ss_pred             -----------cCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHH
Confidence                       0000000112223567789999999999998765   999999999999999999   56765444333


Q ss_pred             HHHHhcCCC---C---CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          293 FYRILCRPP---D---LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       293 ~~~i~~~~~---~---~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                      .-..+....   .   +.+.-+.-..+|++||+.||++||||.|+|++.||-
T Consensus       824 iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  824 ILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             HHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            222232211   1   111223456899999999999999999999999997

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=8.6e-41  Score=314.63  Aligned_cols=253  Identities=24%  Similarity=0.343  Sum_probs=207.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCC---CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVES---SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      +...+|.+.+.||+|+||.||+|.+...   ...||||.+.....            ....+.+..|+.+++.++||||+
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~------------~~~~~~~~~e~~~l~~~~h~~i~   70 (270)
T cd05056           3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS------------PSVREKFLQEAYIMRQFDHPHIV   70 (270)
T ss_pred             echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC------------HHHHHHHHHHHHHHHhCCCCchh
Confidence            4556799999999999999999987644   34699998743321            12345788899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.+ ...|+||||+++++|.+++.... ..++...+..++.||+.||+|||+.|++||||||+|||++.++.++|
T Consensus        71 ~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l  148 (270)
T cd05056          71 KLIGVITE-NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKL  148 (270)
T ss_pred             ceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEE
Confidence            99998875 45789999999999999987643 34899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++........                                                       .......+++.
T Consensus       149 ~d~g~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~  173 (270)
T cd05056         149 GDFGLSRYLEDESY-------------------------------------------------------YKASKGKLPIK  173 (270)
T ss_pred             ccCceeeecccccc-------------------------------------------------------eecCCCCcccc
Confidence            99999876532100                                                       00111124567


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+....+...  .+.....+..+.++|.+||..+|.+||
T Consensus       174 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  253 (270)
T cd05056         174 WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRP  253 (270)
T ss_pred             ccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            999999998889999999999999999986 99999988877666655432  233445678999999999999999999


Q ss_pred             ChHHHhcC
Q 014344          327 GVEEIKGH  334 (426)
Q Consensus       327 s~~eil~h  334 (426)
                      |+.+++..
T Consensus       254 t~~~~~~~  261 (270)
T cd05056         254 RFTELKAQ  261 (270)
T ss_pred             CHHHHHHH
Confidence            99999863

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-40  Score=315.37  Aligned_cols=255  Identities=22%  Similarity=0.280  Sum_probs=209.4

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCc----eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSE----SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      +.++..+|++++.||+|+||+||+|.++.+++    .+|+|++.+...            ......+.+|+.+++.++||
T Consensus         2 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~------------~~~~~~~~~e~~~l~~l~h~   69 (279)
T cd05057           2 RILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS------------PKANKEILDEAYVMASVDHP   69 (279)
T ss_pred             cccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC------------HHHHHHHHHHHHHHHhCCCC
Confidence            34567789999999999999999999877665    589998744321            22446788899999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++.. ...++||||+.+|+|.+++.... ..+++..+..++.||+.||+|||+.||+||||||+|||++.++.
T Consensus        70 ~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~  147 (279)
T cd05057          70 HVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQH  147 (279)
T ss_pred             CcceEEEEEec-CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCe
Confidence            99999999877 78899999999999999887653 34899999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++..+.......                                                      ......+
T Consensus       148 ~kL~dfg~~~~~~~~~~~~------------------------------------------------------~~~~~~~  173 (279)
T cd05057         148 VKITDFGLAKLLDVDEKEY------------------------------------------------------HAEGGKV  173 (279)
T ss_pred             EEECCCcccccccCcccce------------------------------------------------------ecCCCcc
Confidence            9999999998654211000                                                      0001124


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      +..|+|||.+....++.++|+|||||++||+++ |+.||.+....+....+....  +.....+..+.+++.+||..+|.
T Consensus       174 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~  253 (279)
T cd05057         174 PIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAE  253 (279)
T ss_pred             cccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence            567999999988889999999999999999998 999999888776665554322  22334567899999999999999


Q ss_pred             CCCChHHHhc
Q 014344          324 KRIGVEEIKG  333 (426)
Q Consensus       324 ~R~s~~eil~  333 (426)
                      .||++.++++
T Consensus       254 ~Rp~~~~l~~  263 (279)
T cd05057         254 SRPTFKELIN  263 (279)
T ss_pred             hCCCHHHHHH
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=8e-41  Score=312.89  Aligned_cols=244  Identities=18%  Similarity=0.250  Sum_probs=196.8

Q ss_pred             eecccCceEEEEEEEc--CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCe
Q 014344           23 ALGRGAKGVVFLVKDV--ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        23 ~LG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~  100 (426)
                      .||+|+||.||+|...  ..+..||+|++....            .....+.+.+|+.++++++||||++++++++ ...
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~   68 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN------------EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEA   68 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc------------ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCC
Confidence            4899999999999775  345579999884321            1123456888999999999999999999885 457


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      .++||||+++++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++..+..
T Consensus        69 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~  147 (257)
T cd05115          69 LMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGA  147 (257)
T ss_pred             eEEEEEeCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccC
Confidence            899999999999999876543 4589999999999999999999999999999999999999999999999999875432


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .....                                                     .......+++.|+|||.+.+..
T Consensus       148 ~~~~~-----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~  174 (257)
T cd05115         148 DDSYY-----------------------------------------------------KARSAGKWPLKWYAPECINFRK  174 (257)
T ss_pred             Cccce-----------------------------------------------------eccCCCCCCcccCCHHHHccCC
Confidence            11000                                                     0001112467899999999888


Q ss_pred             CChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          261 HDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ++.++|||||||++|+|++ |..||......+....+....  ......+.++.++|.+||..+|++||++.+|++
T Consensus       175 ~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         175 FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999996 999999887776655554322  223345789999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=7.9e-41  Score=317.23  Aligned_cols=251  Identities=22%  Similarity=0.367  Sum_probs=198.1

Q ss_pred             CCcEEEeeecccCceEEEEEE----EcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           16 SCLRIVSALGRGAKGVVFLVK----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~----~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+|++++.||+|+||+||+|.    +..+++.||+|++....             ....+.+..|+.+++.++||||+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~iv~~   70 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-------------AEHLRDFEREIEILKSLQHDNIVKY   70 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-------------HHHHHHHHHHHHHHHhCCCCCeeEE
Confidence            579999999999999999997    44678899999974321             2235678889999999999999999


Q ss_pred             eeeee--cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           92 RGVLS--TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        92 ~~~~~--~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++.  ....+++||||+++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l  149 (284)
T cd05081          71 KGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKI  149 (284)
T ss_pred             EEEEccCCCCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEE
Confidence            99764  3457899999999999999986543 34899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+.......                                                     .......++..
T Consensus       150 ~dfg~~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~  176 (284)
T cd05081         150 GDFGLTKVLPQDKEYY-----------------------------------------------------KVREPGESPIF  176 (284)
T ss_pred             CCCcccccccCCCcce-----------------------------------------------------eecCCCCCceE
Confidence            9999988653211000                                                     00011123456


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH---------------HHHHHhc---CCCCCCCCCHHHH
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE---------------TFYRILC---RPPDLVGEPTPLR  311 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---------------~~~~i~~---~~~~~~~~~~~~~  311 (426)
                      |+|||++.+..++.++|||||||++|||++|..|+.......               ....++.   ..+.....+..+.
T Consensus       177 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05081         177 WYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIY  256 (284)
T ss_pred             eeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHH
Confidence            999999999889999999999999999999887764432210               0111111   1122334578899


Q ss_pred             HHHHHHhccCCCCCCChHHHhc
Q 014344          312 NLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       312 ~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +||.+||..+|++|||+.+|++
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         257 AIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHHHccCChhhCCCHHHHHH
Confidence            9999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=7.3e-41  Score=317.40  Aligned_cols=248  Identities=20%  Similarity=0.282  Sum_probs=195.3

Q ss_pred             cEEEeeecccCceEEEEEEE----cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           18 LRIVSALGRGAKGVVFLVKD----VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      |++++.||+|+||+||++..    ..+++.||+|++.....            ......+.+|+++|+.++||||+++++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~E~~~l~~l~h~~i~~~~~   73 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG------------QQNTSGWKKEINILKTLYHENIVKYKG   73 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC------------hHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            49999999999999988753    35678999999843311            123456778999999999999999999


Q ss_pred             eeec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           94 VLST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        94 ~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++..  ...+|+||||+++++|.+++...   .+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|
T Consensus        74 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~d  150 (283)
T cd05080          74 CCSEQGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGD  150 (283)
T ss_pred             EEecCCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEee
Confidence            8764  44689999999999999988653   399999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.........                                                     ........++..|+
T Consensus       151 fg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~~  177 (283)
T cd05080         151 FGLAKAVPEGHEY-----------------------------------------------------YRVREDGDSPVFWY  177 (283)
T ss_pred             cccccccCCcchh-----------------------------------------------------hccCCCCCCCceee
Confidence            9998765321100                                                     00011123566799


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH--------------HHHHHh---cCCCCCCCCCHHHHHHH
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE--------------TFYRIL---CRPPDLVGEPTPLRNLI  314 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--------------~~~~i~---~~~~~~~~~~~~~~~li  314 (426)
                      |||.+.+..++.++|||||||++|+|++|..||.......              ......   ...+.....+..+.+++
T Consensus       178 ~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  257 (283)
T cd05080         178 AVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILM  257 (283)
T ss_pred             CHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHH
Confidence            9999998889999999999999999999999986543210              001111   11111234578899999


Q ss_pred             HHHhccCCCCCCChHHHhc
Q 014344          315 RRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~  333 (426)
                      .+||..+|++|||+++++.
T Consensus       258 ~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         258 KNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHhccChhhCCCHHHHHH
Confidence            9999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.2e-40  Score=310.74  Aligned_cols=249  Identities=25%  Similarity=0.373  Sum_probs=208.8

Q ss_pred             cEEEeeecccCceEEEEEEEcCCC----ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESS----ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~----~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      +++.+.||.|+||.||++.+..++    ..||+|++....            .....+.+..|+.+++.++|+||+++++
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~   68 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA------------DEQQIEEFLREARIMRKLDHPNIVKLLG   68 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC------------ChHHHHHHHHHHHHHHhcCCCchheEEE
Confidence            467899999999999999998766    889999984321            1114567888999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.+.+..|++|||+++++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||
T Consensus        69 ~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg  148 (258)
T smart00219       69 VCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFG  148 (258)
T ss_pred             EEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccC
Confidence            99999999999999999999999876544338999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.........                                                       ......+++.|+||
T Consensus       149 ~~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~y~~P  173 (258)
T smart00219      149 LSRDLYDDDYY-------------------------------------------------------KKKGGKLPIRWMAP  173 (258)
T ss_pred             Cceeccccccc-------------------------------------------------------ccccCCCcccccCh
Confidence            98765421100                                                       00011267889999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |.+.+..++.++|+|||||++|+|++ |++||...+....+..+....  ......+..+.+++.+||..+|++|||+.+
T Consensus       174 e~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~  253 (258)
T smart00219      174 ESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSE  253 (258)
T ss_pred             HHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHH
Confidence            99988889999999999999999998 899998877777666665332  223345788999999999999999999999


Q ss_pred             Hhc
Q 014344          331 IKG  333 (426)
Q Consensus       331 il~  333 (426)
                      +++
T Consensus       254 ll~  256 (258)
T smart00219      254 LVE  256 (258)
T ss_pred             HHh
Confidence            985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.9e-40  Score=308.44  Aligned_cols=243  Identities=21%  Similarity=0.327  Sum_probs=200.3

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      +.||+|+||.||+|.. .+++.+|+|++.....            ......+..|+.+++.++||||+++++++......
T Consensus         1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   67 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLP------------QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPI   67 (250)
T ss_pred             CccCCCCCceEEEEEe-cCCcEEEEEecCCcCC------------HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCcc
Confidence            3689999999999986 4688999998743221            12234678899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK  181 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~  181 (426)
                      ++||||+++++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus        68 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  146 (250)
T cd05085          68 YIVMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG  146 (250)
T ss_pred             EEEEECCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccc
Confidence            99999999999999876543 35889999999999999999999999999999999999999999999999998654211


Q ss_pred             CCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCC
Q 014344          182 TPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH  261 (426)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  261 (426)
                      ..                                                       .......+++.|+|||++.+..+
T Consensus       147 ~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~  171 (250)
T cd05085         147 IY-------------------------------------------------------SSSGLKQIPIKWTAPEALNYGRY  171 (250)
T ss_pred             cc-------------------------------------------------------ccCCCCCCcccccCHHHhccCCC
Confidence            10                                                       00011124567999999998889


Q ss_pred             ChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          262 DFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       262 ~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.++|+|||||++|+|++ |..||.+.........+....  ......+..+.+++.+||..+|++||++.++++
T Consensus       172 ~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         172 SSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             CchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            999999999999999998 999999887766655554332  223346789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=3.4e-41  Score=315.86  Aligned_cols=249  Identities=26%  Similarity=0.437  Sum_probs=201.1

Q ss_pred             EEEeeecccCceEEEEEEEc----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           19 RIVSALGRGAKGVVFLVKDV----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        19 ~i~~~LG~G~~g~V~~a~~~----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .+.+.||.|+||.||+|...    ..+..|+||++...            ........+..|++++++++||||++++++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~------------~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~   69 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS------------SSEEEEEEFLNEIQILRKLRHPNIVKLYGF   69 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT------------SSHHHHHHHHHHHHHHHTHSBTTBE-EEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc------------cccccceeeeeccccccccccccccccccc
Confidence            57899999999999999987    34567999998321            122235788889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +...+.+++|||||++|+|.+++.......++...+..++.||+.||.|||+++|+||||+++|||++.++.+||+|||+
T Consensus        70 ~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~  149 (259)
T PF07714_consen   70 CIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGL  149 (259)
T ss_dssp             EESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99888899999999999999999887455699999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +........                                                      ........+...|+|||
T Consensus       150 ~~~~~~~~~------------------------------------------------------~~~~~~~~~~~~~~aPE  175 (259)
T PF07714_consen  150 SRPISEKSK------------------------------------------------------YKNDSSQQLPLRYLAPE  175 (259)
T ss_dssp             GEETTTSSS------------------------------------------------------EEESTTSESGGGGS-HH
T ss_pred             ccccccccc------------------------------------------------------ccccccccccccccccc
Confidence            876521110                                                      00111223667899999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      .+.+..++.++||||||+++|||++ |+.||...+..+....+...  .+.....+..+.++|.+||..||.+|||+.+|
T Consensus       176 ~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i  255 (259)
T PF07714_consen  176 VLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEI  255 (259)
T ss_dssp             HHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHH
Confidence            9999889999999999999999999 78999998887766666432  22334568889999999999999999999999


Q ss_pred             hc
Q 014344          332 KG  333 (426)
Q Consensus       332 l~  333 (426)
                      ++
T Consensus       256 ~~  257 (259)
T PF07714_consen  256 LQ  257 (259)
T ss_dssp             HH
T ss_pred             Hh
Confidence            74

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=5.3e-41  Score=317.18  Aligned_cols=238  Identities=21%  Similarity=0.208  Sum_probs=188.6

Q ss_pred             eecccCceEEEEEEEcCC------------------------CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHH
Q 014344           23 ALGRGAKGVVFLVKDVES------------------------SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR   78 (426)
Q Consensus        23 ~LG~G~~g~V~~a~~~~~------------------------~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   78 (426)
                      .||+|+||.||++....+                        ...||+|++.....             .....+..|+.
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-------------~~~~~~~~~~~   68 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-------------DIALAFFETAS   68 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-------------HHHHHHHHHHH
Confidence            699999999999974321                        13488888743321             22346777899


Q ss_pred             HHHhcCCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCC
Q 014344           79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPEN  158 (426)
Q Consensus        79 il~~l~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~N  158 (426)
                      +++.++||||+++++++..+...|+|||||++|+|..++.... +.+++..+..++.||+.||+|||++||+||||||+|
T Consensus        69 ~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~N  147 (274)
T cd05076          69 LMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKN  147 (274)
T ss_pred             HHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCccc
Confidence            9999999999999999999999999999999999998876533 458999999999999999999999999999999999


Q ss_pred             eeeccCC-------cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCC
Q 014344          159 IMIQENG-------HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPS  231 (426)
Q Consensus       159 iLl~~~g-------~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (426)
                      ||++..+       .+|++|||++......                                                  
T Consensus       148 ill~~~~~~~~~~~~~kl~d~g~~~~~~~~--------------------------------------------------  177 (274)
T cd05076         148 ILLARLGLAEGTSPFIKLSDPGVSFTALSR--------------------------------------------------  177 (274)
T ss_pred             EEEeccCcccCccceeeecCCccccccccc--------------------------------------------------
Confidence            9998644       4899999987543210                                                  


Q ss_pred             CCCCCCCCCccccccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCCCCCCCCCHH
Q 014344          232 RSDSDSSEKSNSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCRPPDLVGEPTP  309 (426)
Q Consensus       232 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  309 (426)
                                ....+++.|+|||.+.+ ..++.++|||||||++|||+ +|..||......+...............+..
T Consensus       178 ----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (274)
T cd05076         178 ----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHRLPEPSCKE  247 (274)
T ss_pred             ----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccCCCCCCChH
Confidence                      11246788999998876 56899999999999999995 6999998776554322222222222233567


Q ss_pred             HHHHHHHHhccCCCCCCChHHHhcC
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +.++|.+||+.+|++|||+.+|+++
T Consensus       248 ~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         248 LATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHHHcccChhhCcCHHHHHHh
Confidence            9999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.6e-40  Score=314.53  Aligned_cols=255  Identities=19%  Similarity=0.227  Sum_probs=208.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcC----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVE----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      ++.++|++.+.||+|+||.||+|.+..    ++..||+|++...            ........+.+|+.+++.++||||
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~------------~~~~~~~~~~~e~~~l~~l~h~ni   70 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH------------ASEIQVTLLLQESCLLYGLSHQNI   70 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC------------CCHHHHHHHHHHHHHHHhCCCCCC
Confidence            456789999999999999999999876    3578999987421            122345678889999999999999


Q ss_pred             ceeeeeeec-CCeEEEEEeccCCCChHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee
Q 014344           89 PRLRGVLST-DKFVGYAIDYCPGRDLHSLRKQQSE------QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI  161 (426)
Q Consensus        89 v~l~~~~~~-~~~~~lV~Ey~~gg~L~~l~~~~~~------~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl  161 (426)
                      +++++++.. ....+++++|+.+++|.+++.....      ..+++..+..++.||+.||+|||++|++||||||+||++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~  150 (280)
T cd05043          71 LPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI  150 (280)
T ss_pred             CeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE
Confidence            999998654 5788999999999999998865432      458999999999999999999999999999999999999


Q ss_pred             ccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          162 QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       162 ~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                      +.++.+||+|||+++.+.......                                                      ..
T Consensus       151 ~~~~~~kl~d~g~~~~~~~~~~~~------------------------------------------------------~~  176 (280)
T cd05043         151 DEELQVKITDNALSRDLFPMDYHC------------------------------------------------------LG  176 (280)
T ss_pred             cCCCcEEECCCCCcccccCCceEE------------------------------------------------------eC
Confidence            999999999999997653221000                                                      00


Q ss_pred             cccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHh
Q 014344          242 NSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLL  318 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L  318 (426)
                      ....++..|+|||++.+..++.++|||||||++|++++ |+.||...+..+....+...  .......+..+.+++.+||
T Consensus       177 ~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  256 (280)
T cd05043         177 DNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCW  256 (280)
T ss_pred             CCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHc
Confidence            11125667999999999889999999999999999998 99999988776655544332  2233345788999999999


Q ss_pred             ccCCCCCCChHHHhc
Q 014344          319 EKDPTKRIGVEEIKG  333 (426)
Q Consensus       319 ~~dP~~R~s~~eil~  333 (426)
                      ..||++|||+.+++.
T Consensus       257 ~~~p~~Rps~~~~~~  271 (280)
T cd05043         257 ALDPEERPSFSQLVQ  271 (280)
T ss_pred             CCChhhCCCHHHHHH
Confidence            999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-43  Score=310.13  Aligned_cols=261  Identities=25%  Similarity=0.367  Sum_probs=211.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ...+.|+-+.+||+|.||.||+|+.+.+++.||+|++..+.           .....-....+|+++|..|+|+|++.++
T Consensus        14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-----------eKeGfpitalreikiL~~lkHenv~nli   82 (376)
T KOG0669|consen   14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-----------EKEGFPITALREIKILQLLKHENVVNLI   82 (376)
T ss_pred             ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-----------cccCCcHHHHHHHHHHHHhcchhHHHHH
Confidence            45577999999999999999999999999999999763321           1122334567799999999999999998


Q ss_pred             eeeec--------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           93 GVLST--------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        93 ~~~~~--------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      +++.+        ...+|+|+.+|+ -||.-++... ...|+..+++.++.+++.||.|+|...|+|||+||+|+||+.+
T Consensus        83 Eic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d  160 (376)
T KOG0669|consen   83 EICRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD  160 (376)
T ss_pred             HHHhhccCCcccccceeeeeHHHhh-hhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC
Confidence            87643        235899999997 7888876543 3459999999999999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      |.+||+|||+++.+.......                                                    ..+-+..
T Consensus       161 gilklADFGlar~fs~~~n~~----------------------------------------------------kprytnr  188 (376)
T KOG0669|consen  161 GILKLADFGLARAFSTSKNVV----------------------------------------------------KPRYTNR  188 (376)
T ss_pred             ceEEeeccccccceecccccC----------------------------------------------------CCCcccc
Confidence            999999999998775322111                                                    1123455


Q ss_pred             ccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--C---------------------C
Q 014344          245 VGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--R---------------------P  300 (426)
Q Consensus       245 ~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~--~---------------------~  300 (426)
                      +-|..|++||.+.| ..|+.+.|||+.|||+.||++|.+.|.+.+...++..|..  .                     +
T Consensus       189 vvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~e  268 (376)
T KOG0669|consen  189 VVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELE  268 (376)
T ss_pred             eeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCC
Confidence            78999999999987 5689999999999999999999999999998877665520  0                     0


Q ss_pred             CCCC-------------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          301 PDLV-------------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       301 ~~~~-------------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                      |-..             ...+.+.||+.+||..||.+|+.++++++|.||.
T Consensus       269 Pl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  269 PLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             CCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence            0000             0123577999999999999999999999999994

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=6.1e-41  Score=318.19  Aligned_cols=253  Identities=22%  Similarity=0.338  Sum_probs=200.3

Q ss_pred             CCcEEEeeecccCceEEEEEEE----cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKD----VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .-|++++.||+|+||.||+|..    ..++..||+|.+....            .......+.+|+.+++.+.||||+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES------------GGNHIADLKKEIEILRNLYHENIVKY   71 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc------------cHHHHHHHHHHHHHHHhCCCCCeeee
Confidence            3489999999999999999984    4678899999974321            12234578889999999999999999


Q ss_pred             eeeeecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           92 RGVLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        92 ~~~~~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++...  ...++||||++|++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|
T Consensus        72 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l  150 (284)
T cd05079          72 KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI  150 (284)
T ss_pred             eeEEecCCCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEE
Confidence            9998765  67899999999999999886543 34899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+......                                                     ........|+..
T Consensus       151 ~dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  177 (284)
T cd05079         151 GDFGLTKAIETDKEY-----------------------------------------------------YTVKDDLDSPVF  177 (284)
T ss_pred             CCCccccccccCccc-----------------------------------------------------eeecCCCCCCcc
Confidence            999998865321100                                                     001122346778


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH--------------HHHHHHHh---cCCCCCCCCCHHHHH
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR--------------KETFYRIL---CRPPDLVGEPTPLRN  312 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--------------~~~~~~i~---~~~~~~~~~~~~~~~  312 (426)
                      |+|||++.+..++.++|||||||++|+|++++.|+.....              .......+   ...+.....+..+.+
T Consensus       178 y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (284)
T cd05079         178 WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQ  257 (284)
T ss_pred             ccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHH
Confidence            9999999988899999999999999999998776532211              01111111   112223456788999


Q ss_pred             HHHHHhccCCCCCCChHHHhcC
Q 014344          313 LIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       313 li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ||.+||+.+|.+||++++++.+
T Consensus       258 li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         258 LMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHHccCCcccCcCHHHHHHH
Confidence            9999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=2.3e-40  Score=317.35  Aligned_cols=256  Identities=21%  Similarity=0.291  Sum_probs=205.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCc----eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSE----SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      +.+..++|++++.||+|+||.||+|.+..+++    .+|+|++....            .......+..|+.+++.++||
T Consensus         2 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~e~~~~~~l~h~   69 (303)
T cd05110           2 RILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT------------GPKANVEFMDEALIMASMDHP   69 (303)
T ss_pred             cccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC------------CHHHHHHHHHHHHHHHhCCCC
Confidence            35677889999999999999999999987776    46888764321            112234678899999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++... ..++++||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus        70 niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~  147 (303)
T cd05110          70 HLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH  147 (303)
T ss_pred             CcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCc
Confidence            999999998654 4679999999999999876543 34889999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++..+.....                                                      ........+
T Consensus       148 ~kL~Dfg~~~~~~~~~~------------------------------------------------------~~~~~~~~~  173 (303)
T cd05110         148 VKITDFGLARLLEGDEK------------------------------------------------------EYNADGGKM  173 (303)
T ss_pred             eEEccccccccccCccc------------------------------------------------------ccccCCCcc
Confidence            99999999976532110                                                      001112235


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      +..|+|||.+.+..++.++|||||||++|||++ |..||.+.........+..  ..+.....+..+.++|.+||..+|+
T Consensus       174 ~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~  253 (303)
T cd05110         174 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDAD  253 (303)
T ss_pred             ccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence            778999999999999999999999999999997 9999988765544333322  2222334577899999999999999


Q ss_pred             CCCChHHHhcC
Q 014344          324 KRIGVEEIKGH  334 (426)
Q Consensus       324 ~R~s~~eil~h  334 (426)
                      +||++++++..
T Consensus       254 ~Rp~~~~l~~~  264 (303)
T cd05110         254 SRPKFKELAAE  264 (303)
T ss_pred             hCcCHHHHHHH
Confidence            99999999874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=2.7e-40  Score=311.21  Aligned_cols=245  Identities=19%  Similarity=0.253  Sum_probs=191.5

Q ss_pred             eeecccCceEEEEEEEc--CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCC
Q 014344           22 SALGRGAKGVVFLVKDV--ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      +.||+|+||.||+|...  .++..+|+|.+....            .......+..|+.+++.++||||+++++++.+..
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   68 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA------------SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT   68 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCC------------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            46899999999999864  455679999874321            1122346778999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~---~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+++||||+++|+|.+++....   ...++...++.++.|++.||+|||+.|++||||||+||+++.++.++|+|||++.
T Consensus        69 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~  148 (269)
T cd05087          69 PYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSH  148 (269)
T ss_pred             CcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccc
Confidence            9999999999999999886532   1235677888999999999999999999999999999999999999999999986


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .......                                                      ........|++.|+|||++
T Consensus       149 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~  174 (269)
T cd05087         149 NKYKEDY------------------------------------------------------YVTPDQLWVPLRWIAPELV  174 (269)
T ss_pred             cccCcce------------------------------------------------------eecCCCcCCcccccCHhHh
Confidence            4321100                                                      0011223578889999998


Q ss_pred             cCC-------CCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-------CCCCCCCCHHHHHHHHHHhccC
Q 014344          257 EGK-------GHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR-------PPDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       257 ~~~-------~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~li~~~L~~d  321 (426)
                      .+.       .++.++|+|||||++|+|++ |+.||......+........       +......+..+.++|.+|+ .+
T Consensus       175 ~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~  253 (269)
T cd05087         175 DEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQ  253 (269)
T ss_pred             ccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cC
Confidence            643       35789999999999999996 99999877665544332211       1112234677899999998 68


Q ss_pred             CCCCCChHHHhc
Q 014344          322 PTKRIGVEEIKG  333 (426)
Q Consensus       322 P~~R~s~~eil~  333 (426)
                      |++|||+++|+.
T Consensus       254 P~~Rpt~~~l~~  265 (269)
T cd05087         254 PEQRPSAEEVHL  265 (269)
T ss_pred             cccCCCHHHHHH
Confidence            999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=2.9e-40  Score=310.84  Aligned_cols=245  Identities=20%  Similarity=0.288  Sum_probs=191.1

Q ss_pred             eeecccCceEEEEEEEcC--CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCC
Q 014344           22 SALGRGAKGVVFLVKDVE--SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      ++||+|+||+||+|....  ....+|+|.+....            .......+.+|+.+++.++||||+++++.+....
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~   68 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA------------TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI   68 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC------------ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC
Confidence            468999999999997533  34568888763221            1123456788999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSE---QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~---~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+|+||||+++|+|.+++.....   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        69 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~  148 (269)
T cd05042          69 PYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLAL  148 (269)
T ss_pred             ceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEecccccc
Confidence            99999999999999998876432   235678889999999999999999999999999999999999999999999986


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .......                                                      ........+++.|+|||++
T Consensus       149 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~aPE~~  174 (269)
T cd05042         149 EQYPEDY------------------------------------------------------YITKDCHAVPLRWLAPELV  174 (269)
T ss_pred             ccccchh------------------------------------------------------eeccCCCCCcccccCHHHH
Confidence            5321100                                                      0001122467789999997


Q ss_pred             cC-------CCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-------CCCCCCCHHHHHHHHHHhccC
Q 014344          257 EG-------KGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP-------PDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       257 ~~-------~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~li~~~L~~d  321 (426)
                      ..       ..++.++|||||||++|+|++ |..||......+....+....       ......+..+.+++..|+ .|
T Consensus       175 ~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d  253 (269)
T cd05042         175 EIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LD  253 (269)
T ss_pred             hhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cC
Confidence            53       346789999999999999998 889998887766655543221       112244677889999998 59


Q ss_pred             CCCCCChHHHhc
Q 014344          322 PTKRIGVEEIKG  333 (426)
Q Consensus       322 P~~R~s~~eil~  333 (426)
                      |++|||+++|+.
T Consensus       254 p~~Rpt~~~v~~  265 (269)
T cd05042         254 PETRPTAEEVHE  265 (269)
T ss_pred             cccccCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-40  Score=307.44  Aligned_cols=244  Identities=23%  Similarity=0.321  Sum_probs=201.9

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      ++||.|+||.||+|.+.. ++.||+|++......            .....+..|+.++++++||||+++++++......
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   67 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP------------DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPI   67 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH------------HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCe
Confidence            479999999999999877 999999988543211            2345788899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK  181 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~  181 (426)
                      |+||||+.|++|.+++.... ..++...+..++.|++.||+|||++|++||||||+|||++.++.++|+|||++......
T Consensus        68 ~~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~  146 (251)
T cd05041          68 YIVMELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGG  146 (251)
T ss_pred             EEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence            99999999999999886543 35889999999999999999999999999999999999999999999999998754311


Q ss_pred             CCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCC
Q 014344          182 TPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH  261 (426)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  261 (426)
                      ...                                                      .......++..|+|||.+.+..+
T Consensus       147 ~~~------------------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~  172 (251)
T cd05041         147 IYT------------------------------------------------------VSDGLKQIPIKWTAPEALNYGRY  172 (251)
T ss_pred             cce------------------------------------------------------eccccCcceeccCChHhhccCCC
Confidence            100                                                      00011124567999999998889


Q ss_pred             ChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          262 DFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       262 ~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.++|+|||||++|+|++ |..||...........+...  .+.....+..+.++|.+||..+|.+|||+.|+++
T Consensus       173 ~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         173 TSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             CcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            999999999999999998 89999887766655555432  2223355788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.2e-40  Score=309.37  Aligned_cols=236  Identities=24%  Similarity=0.224  Sum_probs=191.1

Q ss_pred             eeecccCceEEEEEEEcCCC----------ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           22 SALGRGAKGVVFLVKDVESS----------ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~----------~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      +.||+|+||.||+|.+..++          ..+++|++....              .....+.+|+.+|+.++||||+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--------------~~~~~~~~e~~~l~~l~h~~i~~~   66 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH--------------RDSLAFFETASLMSQLSHKHLVKL   66 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch--------------hhHHHHHHHHHHHHcCCCcchhhe
Confidence            46899999999999998776          347777763221              114577889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC------
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG------  165 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g------  165 (426)
                      ++++.. ...++||||+++++|.+++..... .++...+..++.||+.||+|||++||+||||||+|||++.++      
T Consensus        67 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~  144 (259)
T cd05037          67 YGVCVR-DENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYV  144 (259)
T ss_pred             eeEEec-CCcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCc
Confidence            999887 778999999999999998876543 589999999999999999999999999999999999999888      


Q ss_pred             -cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          166 -HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       166 -~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                       .+||+|||++.....                                                            ....
T Consensus       145 ~~~kl~Dfg~a~~~~~------------------------------------------------------------~~~~  164 (259)
T cd05037         145 PFIKLSDPGIPITVLS------------------------------------------------------------REER  164 (259)
T ss_pred             eeEEeCCCCccccccc------------------------------------------------------------cccc
Confidence             899999999876431                                                            1122


Q ss_pred             ccCCCCccchhhcCC--CCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccC
Q 014344          245 VGTEEYVAPEIIEGK--GHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~d  321 (426)
                      .++..|+|||++.+.  .++.++|+|||||++|+|++ |..||...+..+..................+.++|.+||..+
T Consensus       165 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  244 (259)
T cd05037         165 VERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPDCAELANLINQCWTYD  244 (259)
T ss_pred             ccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccC
Confidence            466789999999877  78999999999999999998 688887765433322222221112222478899999999999


Q ss_pred             CCCCCChHHHhc
Q 014344          322 PTKRIGVEEIKG  333 (426)
Q Consensus       322 P~~R~s~~eil~  333 (426)
                      |.+|||+.++++
T Consensus       245 p~~Rpt~~~il~  256 (259)
T cd05037         245 PTKRPSFRAILR  256 (259)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.7e-40  Score=312.27  Aligned_cols=246  Identities=21%  Similarity=0.323  Sum_probs=200.0

Q ss_pred             eeecccCceEEEEEEEcCCC------ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           22 SALGRGAKGVVFLVKDVESS------ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~------~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.||+|+||.||+|++....      +.+|+|.+.+..            .......+.+|+.+++.++||||+++++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA------------TDQEKKEFLKEAHLMSNFNHPNIVKLLGVC   68 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhccc------------chhhHHHHHHHHHHHHhcCCCCeeeEeeee
Confidence            36899999999999986543      679999874321            112345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-----
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQS-----EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-----  165 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~-----~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-----  165 (426)
                      ......++||||++|++|.+++....     ...++...+..++.||+.||.|||+.+++||||||+||+++.++     
T Consensus        69 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~  148 (269)
T cd05044          69 LLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADR  148 (269)
T ss_pred             cCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCc
Confidence            99999999999999999999886532     23478899999999999999999999999999999999999887     


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .++|+|||++..+......                                                      .......
T Consensus       149 ~~~l~dfg~~~~~~~~~~~------------------------------------------------------~~~~~~~  174 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYY------------------------------------------------------RKEGEGL  174 (269)
T ss_pred             ceEECCccccccccccccc------------------------------------------------------ccCcccC
Confidence            8999999998765321100                                                      0011223


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      ++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+...  .......+..+.+||.+||..+|
T Consensus       175 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  254 (269)
T cd05044         175 LPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDP  254 (269)
T ss_pred             CCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCc
Confidence            5678999999999889999999999999999997 99999887776665554322  22233457889999999999999


Q ss_pred             CCCCChHHHhc
Q 014344          323 TKRIGVEEIKG  333 (426)
Q Consensus       323 ~~R~s~~eil~  333 (426)
                      .+||+++++++
T Consensus       255 ~~Rp~~~~i~~  265 (269)
T cd05044         255 SERPTFDRIQE  265 (269)
T ss_pred             ccCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=4.9e-40  Score=307.84  Aligned_cols=248  Identities=20%  Similarity=0.280  Sum_probs=195.5

Q ss_pred             eeecccCceEEEEEEEcC---CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee-c
Q 014344           22 SALGRGAKGVVFLVKDVE---SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS-T   97 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~-~   97 (426)
                      +.||+|+||.||+|.+..   .+..+|||.+....            .......+..|+.+++.++||||+++++++. .
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   68 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT------------DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS   68 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC------------CHHHHHHHHHHHHHHccCCCCCcceEEEEeecC
Confidence            468999999999998753   34579999873211            1123457778999999999999999999764 5


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      +...++||||+.+++|.+++.... ..++...+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..
T Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~  147 (262)
T cd05058          69 EGSPLVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARD  147 (262)
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCcccccc
Confidence            667899999999999999987543 3367788888999999999999999999999999999999999999999999875


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      +......                                                    .........+++.|+|||.+.
T Consensus       148 ~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~aPE~~~  175 (262)
T cd05058         148 IYDKEYY----------------------------------------------------SVHNHTGAKLPVKWMALESLQ  175 (262)
T ss_pred             ccCCcce----------------------------------------------------eecccccCcCCccccChhHhc
Confidence            5321100                                                    000011223577899999999


Q ss_pred             CCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          258 GKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       258 ~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +..++.++|||||||++|||++ |.+||...+..+....+....  +.....+..+.+++.+||..+|++||++.+++..
T Consensus       176 ~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         176 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             cCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            8889999999999999999999 577888777666555554322  2222347889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-41  Score=317.52  Aligned_cols=131  Identities=24%  Similarity=0.330  Sum_probs=115.7

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-----C---CCc
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-----H---PLL   88 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-----h---p~i   88 (426)
                      +|.+.++||+|-|++||||.|..+.++||+||.+...              ...+....|+++|+++.     |   .+|
T Consensus        79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--------------hYtEaAlDEIklL~~v~~~Dp~~~~~~~V  144 (590)
T KOG1290|consen   79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--------------HYTEAALDEIKLLQQVREGDPNDPGKKCV  144 (590)
T ss_pred             eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh--------------HHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence            4999999999999999999999999999999985432              23345677999999983     2   479


Q ss_pred             ceeeeeee----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeec
Q 014344           89 PRLRGVLS----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQ  162 (426)
Q Consensus        89 v~l~~~~~----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~  162 (426)
                      |+|++.|.    ...++|+|+|++ |..|..+|.....+.++...++.|++||+.||+|||. .||||-||||+|||+.
T Consensus       145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            99999995    456899999999 7899999998888889999999999999999999996 6999999999999994

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=347.32  Aligned_cols=257  Identities=23%  Similarity=0.319  Sum_probs=216.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCC-C----ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVES-S----ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~-~----~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      +.++....++++.||+|+||.||.+.-... +    ..||||.+.+.            ...+....|.+|..+|+.++|
T Consensus       687 p~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~------------~~~~~~~~Fl~Ea~~m~~f~H  754 (1025)
T KOG1095|consen  687 PEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL------------SSEQEVSDFLKEALLMSKFDH  754 (1025)
T ss_pred             ccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc------------CCHHHHHHHHHHHHHHhcCCC
Confidence            456678899999999999999999987533 2    24999988443            233456789999999999999


Q ss_pred             CCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCee
Q 014344           86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-----EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIM  160 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~-----~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiL  160 (426)
                      ||||+++|+..+....++++|||+||||.++++..+     ...++......++.||+.|++||+++++|||||..+|+|
T Consensus       755 pNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCL  834 (1025)
T KOG1095|consen  755 PNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCL  834 (1025)
T ss_pred             cceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhhee
Confidence            999999999999999999999999999999998652     234888999999999999999999999999999999999


Q ss_pred             eccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          161 IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       161 l~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                      |+....+||+|||||+.+....-                                                      .++
T Consensus       835 L~~~r~VKIaDFGlArDiy~~~y------------------------------------------------------yr~  860 (1025)
T KOG1095|consen  835 LDERRVVKIADFGLARDIYDKDY------------------------------------------------------YRK  860 (1025)
T ss_pred             ecccCcEEEcccchhHhhhhchh------------------------------------------------------eec
Confidence            99999999999999995543210                                                      001


Q ss_pred             ccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHH
Q 014344          241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRL  317 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~  317 (426)
                      ...-.-...|||||.+....++.++|||||||+|||+++ |..||.+.+..+.+...+.  +.+.+..+|..+.++|..|
T Consensus       861 ~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~C  940 (1025)
T KOG1095|consen  861 HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQC  940 (1025)
T ss_pred             cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHH
Confidence            111123457999999999999999999999999999997 9999999998888765543  3455567789999999999


Q ss_pred             hccCCCCCCChHHHhc
Q 014344          318 LEKDPTKRIGVEEIKG  333 (426)
Q Consensus       318 L~~dP~~R~s~~eil~  333 (426)
                      |..+|++||++..|++
T Consensus       941 W~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  941 WKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ccCChhhCccHHHHHh
Confidence            9999999999999987

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=5.2e-40  Score=309.03  Aligned_cols=258  Identities=25%  Similarity=0.351  Sum_probs=208.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcC-CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh-cCCCCcceeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVE-SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN-VEHPLLPRLRGV   94 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~l~~~   94 (426)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+.........   ..........++..|+.++.+ ++||||++++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~   77 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGK---DKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKT   77 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeecccccccc---ccccchHHHHHHHHHHHHHhhcCCCCCeeeEEee
Confidence            48899999999999999999987 7889999998544322110   001122345567778888875 789999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +..+...++||||++|++|.+++...  ....+++..+..++.|++.||.|||+ .|++||||||+|||++.++.++|+|
T Consensus        78 ~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          78 FLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             EccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEec
Confidence            99999999999999999999887542  33468999999999999999999996 7899999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                         ......|+..|+
T Consensus       158 fg~~~~~~~~~---------------------------------------------------------~~~~~~~~~~~~  180 (269)
T cd08528         158 FGLAKQKQPES---------------------------------------------------------KLTSVVGTILYS  180 (269)
T ss_pred             ccceeeccccc---------------------------------------------------------ccccccCcccCc
Confidence            99987543210                                                         112345888999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||.+.+..++.++|+|||||++|+|++|++||...........+.....   .....+..+.++|.+||+.||++||++
T Consensus       181 ~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~  260 (269)
T cd08528         181 CPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDI  260 (269)
T ss_pred             ChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCH
Confidence            99999998899999999999999999999999988776655555443221   112357889999999999999999999


Q ss_pred             HHHhcC
Q 014344          329 EEIKGH  334 (426)
Q Consensus       329 ~eil~h  334 (426)
                      .|+..+
T Consensus       261 ~e~~~~  266 (269)
T cd08528         261 IQVSAM  266 (269)
T ss_pred             HHHHHH
Confidence            998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=6.8e-40  Score=308.76  Aligned_cols=252  Identities=19%  Similarity=0.300  Sum_probs=202.2

Q ss_pred             cEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      |++.+.||+|+||.||+|...   .+++.||||++.....           .....+.+.+|+.+++.++||||++++++
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   69 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-----------SSSDIEEFLREAACMKEFDHPNVIKLIGV   69 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-----------ChHHHHHHHHHHHHHhcCCCCCcceEEEE
Confidence            678899999999999999865   3578999999844321           12235668889999999999999999998


Q ss_pred             eecCC------eEEEEEeccCCCChHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           95 LSTDK------FVGYAIDYCPGRDLHSLRKQQS----EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        95 ~~~~~------~~~lV~Ey~~gg~L~~l~~~~~----~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      +...+      ..+++++|+.+|+|..++....    ...++...+..++.||+.||+|||+.||+||||||+||+++.+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~  149 (273)
T cd05074          70 SLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN  149 (273)
T ss_pred             EccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC
Confidence            85432      3578999999999988764321    1247899999999999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||++........                                                      .......
T Consensus       150 ~~~kl~dfg~~~~~~~~~~------------------------------------------------------~~~~~~~  175 (273)
T cd05074         150 MTVCVADFGLSKKIYSGDY------------------------------------------------------YRQGCAS  175 (273)
T ss_pred             CCEEECcccccccccCCcc------------------------------------------------------eecCCCc
Confidence            9999999999876532110                                                      0011122


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccC
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~d  321 (426)
                      .+++.|++||.+.+..++.++|||||||++|+|++ |.+||.+.+..+.+..+....  ......+..+.+++.+||..+
T Consensus       176 ~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~  255 (273)
T cd05074         176 KLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPE  255 (273)
T ss_pred             cCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence            35678999999999889999999999999999998 999998887766665554322  223355788999999999999


Q ss_pred             CCCCCChHHHhcC
Q 014344          322 PTKRIGVEEIKGH  334 (426)
Q Consensus       322 P~~R~s~~eil~h  334 (426)
                      |++|||+.+++.+
T Consensus       256 p~~Rps~~~~~~~  268 (273)
T cd05074         256 PKCRPSFQHLRDQ  268 (273)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.7e-39  Score=305.68  Aligned_cols=245  Identities=17%  Similarity=0.231  Sum_probs=190.9

Q ss_pred             eeecccCceEEEEEEEcCC--CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCC
Q 014344           22 SALGRGAKGVVFLVKDVES--SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      +.||+|+||.||++.....  ...+++|.+....            .......+.+|+.+++.++||||+++++.+....
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~------------~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~   68 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA------------SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI   68 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC------------ChHHHHHHHHHHHHHhccCCcchhheEEEecCCC
Confidence            3699999999999976433  2346666653321            1123467888999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ..|+|||||++|+|.+++....  ...++...++.++.||+.||+|||+++|+||||||+|||++.++.++|+|||++..
T Consensus        69 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086          69 PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccc
Confidence            9999999999999999887542  23467778889999999999999999999999999999999999999999998754


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      .....                                                      ........+|++.|+|||++.
T Consensus       149 ~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aPE~~~  174 (268)
T cd05086         149 RYKED------------------------------------------------------YIETEDDKCVPLRWLAPELVG  174 (268)
T ss_pred             cCcch------------------------------------------------------hhhcccCCcCcccccCchhcc
Confidence            32100                                                      001112345888999999985


Q ss_pred             C-------CCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-------CCCCCCCHHHHHHHHHHhccCC
Q 014344          258 G-------KGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP-------PDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       258 ~-------~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      .       ..++.++|||||||++|||++ |..||...+..+.+..++...       ......+..+.+++..|| .+|
T Consensus       175 ~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P  253 (268)
T cd05086         175 EFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSP  253 (268)
T ss_pred             cccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCc
Confidence            3       235779999999999999996 678998877776666554321       122245677899999999 679


Q ss_pred             CCCCChHHHhc
Q 014344          323 TKRIGVEEIKG  333 (426)
Q Consensus       323 ~~R~s~~eil~  333 (426)
                      .+||++++|++
T Consensus       254 ~~Rp~~~~i~~  264 (268)
T cd05086         254 EKRATAEEVHR  264 (268)
T ss_pred             ccCCCHHHHHH
Confidence            99999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-41  Score=334.28  Aligned_cols=242  Identities=31%  Similarity=0.448  Sum_probs=196.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ..|..-+.||+||||.||+++++.+|+.||||.+.+..            .....++..+|+++|++|+|||||+++++=
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~------------~~r~~e~~~~EieilkKLnh~NIVk~f~ie   80 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES------------SLRPRERWCREIEILKKLNHPNIVKLFDIE   80 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhc------------ccchHHHHHHHHHHHHHcCchhhhhhcccC
Confidence            34678899999999999999999999999999986543            112356778899999999999999999986


Q ss_pred             ecCC------eEEEEEeccCCCChHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc--CC-
Q 014344           96 STDK------FVGYAIDYCPGRDLHSLRKQQ-SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE--NG-  165 (426)
Q Consensus        96 ~~~~------~~~lV~Ey~~gg~L~~l~~~~-~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~--~g-  165 (426)
                      ++..      ...+|||||.||||...++.- ....+++.+++.++..+..||.|||++|||||||||+||++..  +| 
T Consensus        81 e~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq  160 (732)
T KOG4250|consen   81 ETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQ  160 (732)
T ss_pred             CccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCc
Confidence            5544      467999999999999987642 1234999999999999999999999999999999999999863  34 


Q ss_pred             -cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          166 -HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       166 -~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                       .-||+|||.|+.+..                                                         +...+++
T Consensus       161 ~IyKLtDfG~Arel~d---------------------------------------------------------~s~~~S~  183 (732)
T KOG4250|consen  161 SIYKLTDFGAARELDD---------------------------------------------------------NSLFTSL  183 (732)
T ss_pred             eEEeeecccccccCCC---------------------------------------------------------CCeeeee
Confidence             359999999997743                                                         2357789


Q ss_pred             ccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCCCCC---------------
Q 014344          245 VGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSS----RKETFYRILCRPPDLV---------------  304 (426)
Q Consensus       245 ~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~~~~i~~~~~~~~---------------  304 (426)
                      +||+.|.+||++.. ..|+..+|.|||||++|+++||..||....    ..+...++..+.+...               
T Consensus       184 vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s  263 (732)
T KOG4250|consen  184 VGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWS  263 (732)
T ss_pred             cCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeee
Confidence            99999999999984 889999999999999999999999996432    3345555554433321               


Q ss_pred             -------CCC----HHHHHHHHHHhccCCCCCC
Q 014344          305 -------GEP----TPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       305 -------~~~----~~~~~li~~~L~~dP~~R~  326 (426)
                             ..+    ..+...+..+|..+|.+|.
T Consensus       264 ~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  264 STLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             ccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                   111    1245788999999999999

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=4.3e-40  Score=338.23  Aligned_cols=260  Identities=21%  Similarity=0.216  Sum_probs=181.8

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCC----CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVES----SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      .+.+..++|++.+.||+|+||.||+|++..+    +..||+|.+.....               ......|  .++...+
T Consensus       126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---------------~e~~~~e--~l~~~~~  188 (566)
T PLN03225        126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---------------VEIWMNE--RVRRACP  188 (566)
T ss_pred             CCCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---------------hHHHHHH--HHHhhch
Confidence            3456788999999999999999999999988    89999998743110               0001111  1111122


Q ss_pred             CCcceeeee------eecCCeEEEEEeccCCCChHHHHHHhccC------------------CCCHHHHHHHHHHHHHHH
Q 014344           86 PLLPRLRGV------LSTDKFVGYAIDYCPGRDLHSLRKQQSEQ------------------MFSDDTIRFYAAELVLAL  141 (426)
Q Consensus        86 p~iv~l~~~------~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~------------------~l~~~~~~~~~~qil~aL  141 (426)
                      .++..+...      ...+..+++||||+.+++|.+++......                  ......++.++.||+.||
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL  268 (566)
T PLN03225        189 NSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFAL  268 (566)
T ss_pred             hhHHHHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHH
Confidence            222222221      24567899999999999999987643210                  112345778999999999


Q ss_pred             HHHHHCCCcccCCCCCCeeecc-CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCC
Q 014344          142 EYLHNMGIVYRDLKPENIMIQE-NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPV  220 (426)
Q Consensus       142 ~~LH~~giiHrDlKp~NiLl~~-~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (426)
                      .|||++||+||||||+|||++. ++.+||+|||+|+.+....                                      
T Consensus       269 ~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------------------------------  310 (566)
T PLN03225        269 DGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------------------------------  310 (566)
T ss_pred             HHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--------------------------------------
Confidence            9999999999999999999986 5899999999997653211                                      


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC----------------------CChhhHHHHHHHHHHHHH
Q 014344          221 HSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG----------------------HDFAVDWWSLGVVLHEML  278 (426)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----------------------~~~~~DiwSlG~il~ell  278 (426)
                                       ......++||+.|||||.+....                      ++.++|||||||++|||+
T Consensus       311 -----------------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~  373 (566)
T PLN03225        311 -----------------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMA  373 (566)
T ss_pred             -----------------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHH
Confidence                             11223467899999999764322                      344679999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHhcCC------------CCC-----------CCCCHHHHHHHHHHhccCCCCCCChHHHhcCC
Q 014344          279 YGATPFRGSSRKETFYRILCRP------------PDL-----------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHE  335 (426)
Q Consensus       279 ~g~~pf~~~~~~~~~~~i~~~~------------~~~-----------~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp  335 (426)
                      ++..|+.  +....+.+++...            +..           ........+||.+||++||++|||++++|+||
T Consensus       374 ~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hp  451 (566)
T PLN03225        374 FPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHP  451 (566)
T ss_pred             hCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCc
Confidence            8766543  2222222221110            000           00123356899999999999999999999999


Q ss_pred             CcCCCChh
Q 014344          336 FFKGVNWE  343 (426)
Q Consensus       336 ~f~~~~~~  343 (426)
                      ||++..+.
T Consensus       452 ff~~~~~~  459 (566)
T PLN03225        452 YFDREGLL  459 (566)
T ss_pred             CcCCCCcc
Confidence            99987765

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.6e-39  Score=307.71  Aligned_cols=253  Identities=20%  Similarity=0.322  Sum_probs=202.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEc----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDV----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ..+|++++.||+|+||.||+|...    .+++.||+|++......            .....+..|+.+++.+.||||++
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~------------~~~~~~~~ei~~l~~l~~~~i~~   70 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE------------QHRSDFEREIEILRTLDHENIVK   70 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch------------HHHHHHHHHHHHHHhCCCCChhe
Confidence            457899999999999999999864    34789999998543211            24567888999999999999999


Q ss_pred             eeeeeec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           91 LRGVLST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        91 l~~~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +++++..  ....++||||+++++|.+++..... .++...+..++.||+.||+|||++||+||||||+||+++.++.++
T Consensus        71 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~  149 (284)
T cd05038          71 YKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVK  149 (284)
T ss_pred             EEeeeecCCCCceEEEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEE
Confidence            9999877  6689999999999999999876543 489999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++.........                                                     ........++.
T Consensus       150 l~dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~  176 (284)
T cd05038         150 ISDFGLAKVLPEDKDY-----------------------------------------------------YYVKEPGESPI  176 (284)
T ss_pred             EcccccccccccCCcc-----------------------------------------------------eeccCCCCCcc
Confidence            9999998876421100                                                     00011112456


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH--------------HHHHHhcC---CCCCCCCCHHHH
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE--------------TFYRILCR---PPDLVGEPTPLR  311 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--------------~~~~i~~~---~~~~~~~~~~~~  311 (426)
                      .|+|||.+.+..++.++|+|||||++|+|++|..||.......              .....+..   .+.....+..+.
T Consensus       177 ~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05038         177 FWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVY  256 (284)
T ss_pred             cccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHH
Confidence            6999999998889999999999999999999999987643221              11222211   122234567899


Q ss_pred             HHHHHHhccCCCCCCChHHHhc
Q 014344          312 NLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       312 ~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +|+.+||..+|.+|||+.||+.
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         257 DLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=6.6e-41  Score=289.88  Aligned_cols=248  Identities=28%  Similarity=0.492  Sum_probs=204.3

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~   92 (426)
                      +.++|++.+++|+|.|+.||.+....+.+.++||+++.                ...+.+.+|+.||+.|. ||||++++
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP----------------VkkkKIkREikIL~nL~gg~NIi~L~   99 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP----------------VKKKKIKREIKILQNLRGGPNIIKLL   99 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech----------------HHHHHHHHHHHHHHhccCCCCeeehh
Confidence            56789999999999999999999999999999999843                24567888999999997 99999999


Q ss_pred             eeeecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-CcEEE
Q 014344           93 GVLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-GHIML  169 (426)
Q Consensus        93 ~~~~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-g~ikL  169 (426)
                      ++..++  +...+|+||+++.|...+-.     .++...++.|+.|++.||+|||++||+|||+||.|++|+.. ..++|
T Consensus       100 DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrl  174 (338)
T KOG0668|consen  100 DIVKDPESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRL  174 (338)
T ss_pred             hhhcCccccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeee
Confidence            998654  56789999999988876643     38899999999999999999999999999999999999964 57999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|+|+|...+++..                                                         -+-.+.+..
T Consensus       175 IDWGLAEFYHp~~e---------------------------------------------------------YnVRVASRy  197 (338)
T KOG0668|consen  175 IDWGLAEFYHPGKE---------------------------------------------------------YNVRVASRY  197 (338)
T ss_pred             eecchHhhcCCCce---------------------------------------------------------eeeeeehhh
Confidence            99999998876431                                                         223356677


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHh-----------------cCCCCC-------
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFR-GSSRKETFYRIL-----------------CRPPDL-------  303 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~-~~~~~~~~~~i~-----------------~~~~~~-------  303 (426)
                      |-.||++-. ..|+++-|+|||||++..|+..+-||. |.+..+++.+|.                 ..++.+       
T Consensus       198 fKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~  277 (338)
T KOG0668|consen  198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRH  277 (338)
T ss_pred             cCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcc
Confidence            889999876 568999999999999999999888874 444444433331                 001110       


Q ss_pred             --------------CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          304 --------------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       304 --------------~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                    .-.++++.|||.++|.+|-.+|+|++|++.||||..
T Consensus       278 ~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  278 SRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             ccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence                          012577899999999999999999999999999964

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-41  Score=303.49  Aligned_cols=250  Identities=25%  Similarity=0.406  Sum_probs=210.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ..+|.-++-+|.|+- .|..|.|.-.++.||+|.+...           ..+....++..+|..++..+.|+||++++.+
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-----------f~n~~~akra~rel~l~~~v~~~nii~l~n~   83 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-----------FQNQTHAKRAYRELKLMKCVNHKNIISLLNV   83 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-----------cccCccchhhhhhhhhhhhhcccceeeeeec
Confidence            457888999999999 8889999999999999987443           2234567888999999999999999999999


Q ss_pred             eecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      |...      ..+|+||||+. .+|+..+..    .+.-..++.++.|+++|++|||+.||+||||||+||++..++.+|
T Consensus        84 ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lK  158 (369)
T KOG0665|consen   84 FTPQKTLEEFQEVYLVMELMD-ANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLK  158 (369)
T ss_pred             cCccccHHHHHhHHHHHHhhh-hHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhhee
Confidence            9544      36899999996 888887762    277899999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |.|||+|+.-...                                                         -..+.++.|.
T Consensus       159 i~dfg~ar~e~~~---------------------------------------------------------~~mtpyVvtR  181 (369)
T KOG0665|consen  159 ILDFGLARTEDTD---------------------------------------------------------FMMTPYVVTR  181 (369)
T ss_pred             eccchhhcccCcc---------------------------------------------------------cccCchhhee
Confidence            9999999865321                                                         1345668899


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---------------------------
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---------------------------  301 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---------------------------  301 (426)
                      .|.|||++.+.+|...+||||+||++.||++|+..|.|.+.-+++.++.....                           
T Consensus       182 yyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~  261 (369)
T KOG0665|consen  182 YYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAI  261 (369)
T ss_pred             eccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhcc
Confidence            99999999999999999999999999999999999999887776655521100                           


Q ss_pred             ----CCC------------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          302 ----DLV------------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       302 ----~~~------------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                          .++            .....++||+.+||..||++|.+++++|.||||+
T Consensus       262 ~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  262 SFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             chhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                000            1123489999999999999999999999999998

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-42  Score=301.65  Aligned_cols=260  Identities=25%  Similarity=0.413  Sum_probs=210.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLL   88 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i   88 (426)
                      ..++..++.+=+..||.|+||+|++..++.+|+..|||.+......            ...+++..|.+...+- +.|||
T Consensus        58 ~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~------------keq~rll~e~d~~mks~~cp~I  125 (361)
T KOG1006|consen   58 LHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE------------KEQKRLLMEHDTVMKSSNCPNI  125 (361)
T ss_pred             ccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccch------------HHHHHHHHHHHHHHhhcCCcHH
Confidence            4556667788889999999999999999999999999999554332            2345677777765554 68999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHH---HhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccC
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRK---QQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~---~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~  164 (426)
                      |+++|+...++.+|+.||+|+ .+|..+-+   .-....+++..+-.++.-.+.||+||-+ ..|||||+||+|||++..
T Consensus       126 VkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~  204 (361)
T KOG1006|consen  126 VKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRH  204 (361)
T ss_pred             HHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecC
Confidence            999999999999999999995 77766432   2223459999999999999999999985 699999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      |.|||||||.+..+..+..                                                         .+.-
T Consensus       205 G~vKLCDFGIcGqLv~SiA---------------------------------------------------------kT~d  227 (361)
T KOG1006|consen  205 GDVKLCDFGICGQLVDSIA---------------------------------------------------------KTVD  227 (361)
T ss_pred             CCEeeecccchHhHHHHHH---------------------------------------------------------hhhc
Confidence            9999999999987743210                                                         1112


Q ss_pred             ccCCCCccchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCCCCC-------CCCCHHHHHHH
Q 014344          245 VGTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCRPPDL-------VGEPTPLRNLI  314 (426)
Q Consensus       245 ~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~-------~~~~~~~~~li  314 (426)
                      .|...|||||.+..  .+|+-++|+||||++|||+.||..|+++-+. .+++..+....+..       ...+..+..||
T Consensus       228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fi  307 (361)
T KOG1006|consen  228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFI  307 (361)
T ss_pred             cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHH
Confidence            48889999999864  5689999999999999999999999998654 34555554433322       23567899999


Q ss_pred             HHHhccCCCCCCChHHHhcCCCcCC
Q 014344          315 RRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ..||.+|-+.||...+++++||++.
T Consensus       308 ntCl~Kd~~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  308 NTCLIKDRSDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             HHHhhcccccCcchhhhhcCchhhh
Confidence            9999999999999999999999864

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-40  Score=321.17  Aligned_cols=251  Identities=26%  Similarity=0.387  Sum_probs=210.4

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCC--Cc--eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVES--SE--SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~--~~--~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      +..+...+.+.||.|.||.||.+.-...  |+  .||||.++.++            ..+..+.|..|..+|+.++||||
T Consensus       386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~------------t~d~tekflqEa~iMrnfdHphI  453 (974)
T KOG4257|consen  386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC------------TPDDTEKFLQEASIMRNFDHPHI  453 (974)
T ss_pred             eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC------------ChhhHHHHHHHHHHHHhCCCcch
Confidence            3444455667899999999999986432  22  49999985543            33456789999999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++|++ .+...|+|||+++-|.|..|++.+.. .++......|+.||+.||.|||+..+|||||..+|||+.+...||
T Consensus       454 ikLIGv~-~e~P~WivmEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVK  531 (974)
T KOG4257|consen  454 IKLIGVC-VEQPMWIVMELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVK  531 (974)
T ss_pred             hheeeee-eccceeEEEecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceee
Confidence            9999998 56778999999999999999987764 499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.+....-                                                       .++....-..
T Consensus       532 LaDFGLSR~~ed~~y-------------------------------------------------------YkaS~~kLPI  556 (974)
T KOG4257|consen  532 LADFGLSRYLEDDAY-------------------------------------------------------YKASRGKLPI  556 (974)
T ss_pred             ecccchhhhccccch-------------------------------------------------------hhccccccce
Confidence            999999998754321                                                       1111112356


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      .|||||.+.-..++.++|||.|||.+||++. |..||.+-...+...++..  +.|.++.+|+.+..|+.+||.++|.+|
T Consensus       557 KWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kR  636 (974)
T KOG4257|consen  557 KWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKR  636 (974)
T ss_pred             eecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccC
Confidence            7999999999999999999999999999985 9999999887777666553  456677889999999999999999999


Q ss_pred             CChHHHh
Q 014344          326 IGVEEIK  332 (426)
Q Consensus       326 ~s~~eil  332 (426)
                      |++.+|.
T Consensus       637 Prftei~  643 (974)
T KOG4257|consen  637 PRFTEIK  643 (974)
T ss_pred             CcHHHHH
Confidence            9987764

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-40  Score=311.31  Aligned_cols=267  Identities=26%  Similarity=0.398  Sum_probs=214.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|-++..||+|||+.||+|.|....++||+|+-....-=+.      .......+...+|.+|.+.|+||-||++|++|
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~Wrd------EKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf  536 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRD------EKKENYHKHACREYRIHKELDHPRIVKLYDYF  536 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhh------HhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence            569999999999999999999999999999998632111000      01123467788999999999999999999999


Q ss_pred             e-cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--CCcccCCCCCCeeec---cCCcEEE
Q 014344           96 S-TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM--GIVYRDLKPENIMIQ---ENGHIML  169 (426)
Q Consensus        96 ~-~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~--giiHrDlKp~NiLl~---~~g~ikL  169 (426)
                      . +...+|-|+|||+|.||.-|++.+.  .+++.+++.|+.||+.||.||.+.  .|||-||||.|||+-   ..|.|||
T Consensus       537 slDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKI  614 (775)
T KOG1151|consen  537 SLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKI  614 (775)
T ss_pred             eeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEe
Confidence            6 5567899999999999999988764  499999999999999999999975  699999999999995   4578999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +||||++.+......                                                 .....+.+..+.||.+
T Consensus       615 TDFGLSKIMdddSy~-------------------------------------------------~vdGmeLTSQgAGTYW  645 (775)
T KOG1151|consen  615 TDFGLSKIMDDDSYN-------------------------------------------------SVDGMELTSQGAGTYW  645 (775)
T ss_pred             eecchhhhccCCccC-------------------------------------------------cccceeeecccCceee
Confidence            999999987643211                                                 0122345566789999


Q ss_pred             CccchhhcCC----CCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHH--HHhc----CCCCCCCCCHHHHHHHHHHh
Q 014344          250 YVAPEIIEGK----GHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFY--RILC----RPPDLVGEPTPLRNLIRRLL  318 (426)
Q Consensus       250 y~aPE~~~~~----~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~--~i~~----~~~~~~~~~~~~~~li~~~L  318 (426)
                      |++||.+.-.    ..+.++||||+|||+|.+++|+.||...-.. .++.  -|+.    ..|..+-.++++++||++||
T Consensus       646 YLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCL  725 (775)
T KOG1151|consen  646 YLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCL  725 (775)
T ss_pred             ecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHH
Confidence            9999987533    3588999999999999999999999765433 2222  1221    12333455788999999999


Q ss_pred             ccCCCCCCChHHHhcCCCcCC
Q 014344          319 EKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       319 ~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ++.-++|..+.++-.||||..
T Consensus       726 aYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  726 AYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             HhhhhhhhhHHHHccCccccc
Confidence            999999999999999999964

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-40  Score=325.42  Aligned_cols=259  Identities=26%  Similarity=0.368  Sum_probs=225.2

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCc---eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSE---SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      .++++.+...|.++||.|.||.|+.++.+..|+   .||||.++...            ...+...|..|+.||-+++||
T Consensus       623 akEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy------------tekqrrdFL~EAsIMGQFdHP  690 (996)
T KOG0196|consen  623 AKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY------------TEKQRRDFLSEASIMGQFDHP  690 (996)
T ss_pred             hhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc------------cHHHHhhhhhhhhhcccCCCC
Confidence            457888899999999999999999999987664   59999985432            223567899999999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||++|.|+....+.+.||+|||++|+|..+++.+.++ |+..++.-+++.|+.|++||-++|+|||||..+|||++.+-.
T Consensus       691 NIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLv  769 (996)
T KOG0196|consen  691 NIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLV  769 (996)
T ss_pred             cEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceE
Confidence            9999999999999999999999999999999887755 999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +|++|||+++.+....+...                                                     .+.----
T Consensus       770 CKVsDFGLSRvledd~~~~y-----------------------------------------------------tt~GGKI  796 (996)
T KOG0196|consen  770 CKVSDFGLSRVLEDDPEAAY-----------------------------------------------------TTLGGKI  796 (996)
T ss_pred             EEeccccceeecccCCCccc-----------------------------------------------------cccCCcc
Confidence            99999999997754321100                                                     0000012


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHh--cCCCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      ..+|.|||.|....++.++||||+|+++||.+ +|..||-..+..+....|.  .+.|.++++|..+.+|+..||++|-.
T Consensus       797 PiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~  876 (996)
T KOG0196|consen  797 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRN  876 (996)
T ss_pred             ceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhh
Confidence            46799999999999999999999999999976 6999999999999988886  45677889999999999999999999


Q ss_pred             CCCChHHHhcC
Q 014344          324 KRIGVEEIKGH  334 (426)
Q Consensus       324 ~R~s~~eil~h  334 (426)
                      +||.+.+|+++
T Consensus       877 ~RP~F~qiV~~  887 (996)
T KOG0196|consen  877 RRPKFAQIVST  887 (996)
T ss_pred             cCCCHHHHHHH
Confidence            99999999874

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=2.4e-40  Score=315.37  Aligned_cols=254  Identities=26%  Similarity=0.382  Sum_probs=206.9

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC------CC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE------HP   86 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~------hp   86 (426)
                      +--++|.+....|+|-||+|..|.+..-|+.||||+|....              ...+.=..|++||++|.      .-
T Consensus       429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE--------------~M~KtGl~EleiLkKL~~AD~Edk~  494 (752)
T KOG0670|consen  429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE--------------VMHKTGLKELEILKKLNDADPEDKF  494 (752)
T ss_pred             hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch--------------HHhhhhhHHHHHHHHhhccCchhhh
Confidence            33455999999999999999999999999999999995432              23445566999999995      34


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-  164 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~-~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-  164 (426)
                      |+++|+-.|...+++|||+|-+. .+|.++++..+ +-.|....++.|+.|++.||..|-..||+|.||||+|||+++. 
T Consensus       495 Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k  573 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK  573 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc
Confidence            89999999999999999999884 88999887653 2348899999999999999999999999999999999999975 


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      ..+||||||.|......                                                          ..+.+
T Consensus       574 ~iLKLCDfGSA~~~~en----------------------------------------------------------eitPY  595 (752)
T KOG0670|consen  574 NILKLCDFGSASFASEN----------------------------------------------------------EITPY  595 (752)
T ss_pred             ceeeeccCccccccccc----------------------------------------------------------cccHH
Confidence            46899999998765421                                                          11223


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------------------------
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP------------------------  300 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~------------------------  300 (426)
                      .-+..|.|||++.|.+|++..|+||+||+||||.||+..|+|.+...++...+...                        
T Consensus       596 LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf  675 (752)
T KOG0670|consen  596 LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNF  675 (752)
T ss_pred             HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccce
Confidence            34566999999999999999999999999999999999999988766543221000                        


Q ss_pred             ---------------------C------------CCCCC----CHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          301 ---------------------P------------DLVGE----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       301 ---------------------~------------~~~~~----~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                           |            .+++.    -..+++||.+||..||++|+|+.++|+||||++
T Consensus       676 ~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  676 LYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             EEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                                 0            00000    123889999999999999999999999999974

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-39  Score=312.32  Aligned_cols=258  Identities=20%  Similarity=0.253  Sum_probs=214.0

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      ...++..+...+.++||+|-||.|.+|.-. .+..||+|++....            +......|..|+++|.+|+||||
T Consensus       531 al~EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a------------~~~~r~~F~kEIkiLsqLkhPNI  597 (807)
T KOG1094|consen  531 ALVEFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDA------------TKNARNDFLKEIKILSRLKHPNI  597 (807)
T ss_pred             chhhcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCccc------------chhHHHHHHHHHHHHhccCCCCe
Confidence            356677788999999999999999999863 36899999984432            22345789999999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +++++++..++.+++||||++.|+|..++..+............++.||+.|++||.+.++|||||.+.|+|++.++++|
T Consensus       598 veLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iK  677 (807)
T KOG1094|consen  598 VELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIK  677 (807)
T ss_pred             eEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEE
Confidence            99999999999999999999999999998876332234455556999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.+..+.                                                      ..+-...++-..
T Consensus       678 iadfgmsR~lysg~------------------------------------------------------yy~vqgr~vlpi  703 (807)
T KOG1094|consen  678 IADFGMSRNLYSGD------------------------------------------------------YYRVQGRAVLPI  703 (807)
T ss_pred             ecCcccccccccCC------------------------------------------------------ceeeecceeeee
Confidence            99999999775432                                                      111223446678


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHh---------cCCCCCCCCCHHHHHHHHHH
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML--YGATPFRGSSRKETFYRIL---------CRPPDLVGEPTPLRNLIRRL  317 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell--~g~~pf~~~~~~~~~~~i~---------~~~~~~~~~~~~~~~li~~~  317 (426)
                      +|||||.+.-..++.++|+|+||+++||++  +...||...+.++...+.-         .-++.+.-+|..+.++|.+|
T Consensus       704 RwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~C  783 (807)
T KOG1094|consen  704 RWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRC  783 (807)
T ss_pred             eehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHH
Confidence            899999999999999999999999999986  5889999888777655432         11233445688899999999


Q ss_pred             hccCCCCCCChHHHhc
Q 014344          318 LEKDPTKRIGVEEIKG  333 (426)
Q Consensus       318 L~~dP~~R~s~~eil~  333 (426)
                      |.+|.++||+++++-.
T Consensus       784 w~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  784 WRRESEQRPSFEQLHL  799 (807)
T ss_pred             hchhhhcCCCHHHHHH
Confidence            9999999999999854

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-38  Score=309.96  Aligned_cols=247  Identities=25%  Similarity=0.292  Sum_probs=193.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|.--..||+|+||.||++.-.. +..||||.+....            ... .++|.+|+.+|.+++|||+|+|+|++
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~------------~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNS------------GQG-EREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCC------------Ccc-hhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            356666899999999999998744 4899999773321            111 45699999999999999999999999


Q ss_pred             ecCC-eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCCCCeeeccCCcEEEec
Q 014344           96 STDK-FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM---GIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        96 ~~~~-~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~---giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      .+.+ ..+||+||+++|+|.+.+.......+++.....|+.+++.||+|||+.   .||||||||.|||||++...||+|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            9888 599999999999999988765432689999999999999999999985   399999999999999999999999


Q ss_pred             ccccccCCC-CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc-ccCCC
Q 014344          172 FDLSTKLSP-KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF-VGTEE  249 (426)
Q Consensus       172 Fgls~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~  249 (426)
                      ||+|+.... ..                                                         ...+. .||..
T Consensus       221 FGLa~~~~~~~~---------------------------------------------------------~~~~~~~gt~g  243 (361)
T KOG1187|consen  221 FGLAKLGPEGDT---------------------------------------------------------SVSTTVMGTFG  243 (361)
T ss_pred             ccCcccCCcccc---------------------------------------------------------ceeeecCCCCc
Confidence            999954421 10                                                         00111 59999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC---H---HHHHHHHhcC-------CCCC--CCCC-----HH
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS---R---KETFYRILCR-------PPDL--VGEP-----TP  309 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~---~~~~~~i~~~-------~~~~--~~~~-----~~  309 (426)
                      |+|||.+.....+.++|||||||+|.||++|+.|.+...   .   .+.....+..       .+.+  ...+     ..
T Consensus       244 Y~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~  323 (361)
T KOG1187|consen  244 YLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKK  323 (361)
T ss_pred             cCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHH
Confidence            999999998889999999999999999999998887532   1   1111111111       1111  1222     12


Q ss_pred             HHHHHHHHhccCCCCCCChHHHhc
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +..+..+|++.+|..||++.++++
T Consensus       324 ~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  324 LAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHHHHHHHcCcCCCcCcCHHHHHH
Confidence            456788999999999999999754

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-40  Score=293.04  Aligned_cols=256  Identities=27%  Similarity=0.392  Sum_probs=208.6

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +.+--+-||.|+||+||.+.|..+|+.||+|.+..-.           .+-...+++.+|+++|.-++|.|+...++..+
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-----------q~L~s~krvFre~kmLcfFkHdNVLSaLDILQ  122 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-----------QNLASCKRVFREIKMLSSFRHDNVLSLLDILQ  122 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHH-----------HHHHHHHHHHHHHHHHHhhccccHHHHHHhcC
Confidence            4556678999999999999999999999999884321           12234678999999999999999999999886


Q ss_pred             cCC-----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           97 TDK-----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        97 ~~~-----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ...     .+|.++|++. .||+.++-.  .+.++.+.++.+++||+.||+|||+.||.||||||.|+|++++-.+||||
T Consensus       123 Pph~dfFqEiYV~TELmQ-SDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICD  199 (449)
T KOG0664|consen  123 PANPSFFQELYVLTELMQ-SDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICD  199 (449)
T ss_pred             CCCchHHHHHHHHHHHHH-hhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecc
Confidence            554     4678999985 888887653  46699999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+++......                                                       ....+.-+-|-.|+
T Consensus       200 FGLARvee~d~-------------------------------------------------------~~hMTqEVVTQYYR  224 (449)
T KOG0664|consen  200 FGLARTWDQRD-------------------------------------------------------RLNMTHEVVTQYYR  224 (449)
T ss_pred             cccccccchhh-------------------------------------------------------hhhhHHHHHHHHhc
Confidence            99998754221                                                       12334456788999


Q ss_pred             cchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-----------------------cCCCCCCC--
Q 014344          252 APEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----------------------CRPPDLVG--  305 (426)
Q Consensus       252 aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~-----------------------~~~~~~~~--  305 (426)
                      |||++.|. .|+.++||||+|||+.||+..+..|...++.+++..|.                       ..+...+.  
T Consensus       225 APEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~  304 (449)
T KOG0664|consen  225 APELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQ  304 (449)
T ss_pred             cHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCcc
Confidence            99999984 58999999999999999999999999888777665442                       11111111  


Q ss_pred             ----------CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          306 ----------EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       306 ----------~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                                ...+..+++..+|..||.+|++..+++.|+|.....
T Consensus       305 vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  305 RLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR  350 (449)
T ss_pred             ceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence                      123467899999999999999999999999987643

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-38  Score=304.70  Aligned_cols=254  Identities=22%  Similarity=0.317  Sum_probs=220.5

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .|+++..+..+-++||-|.||.||.+.++...--||||.++-+              ...+.+|..|..+|+.++|||+|
T Consensus       261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED--------------tMeveEFLkEAAvMKeikHpNLV  326 (1157)
T KOG4278|consen  261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--------------TMEVEEFLKEAAVMKEIKHPNLV  326 (1157)
T ss_pred             hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc--------------chhHHHHHHHHHHHHhhcCccHH
Confidence            4677888889999999999999999999988888999987332              23567899999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +|++++..+-.+|||+|||..|+|.+|++...+..++.-....++.||..|++||..+++|||||...|+|+.++..||+
T Consensus       327 qLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKv  406 (1157)
T KOG4278|consen  327 QLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKV  406 (1157)
T ss_pred             HHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEe
Confidence            99999999999999999999999999999888778888888899999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +||||++.+...+..+.                         .|.                              --.+.
T Consensus       407 ADFGLsRlMtgDTYTAH-------------------------AGA------------------------------KFPIK  431 (1157)
T KOG4278|consen  407 ADFGLSRLMTGDTYTAH-------------------------AGA------------------------------KFPIK  431 (1157)
T ss_pred             eccchhhhhcCCceecc-------------------------cCc------------------------------cCccc
Confidence            99999998864331110                         000                              02456


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |.|||-+.-..++.++|||+|||+|||+.| |..||.+-+....|..+..  +-....++|+.+..|++.||++.|++||
T Consensus       432 WTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRP  511 (1157)
T KOG4278|consen  432 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRP  511 (1157)
T ss_pred             ccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCc
Confidence            999999999999999999999999999985 9999999988777665543  3345668899999999999999999999


Q ss_pred             ChHHHh
Q 014344          327 GVEEIK  332 (426)
Q Consensus       327 s~~eil  332 (426)
                      ++.||-
T Consensus       512 sFaeiH  517 (1157)
T KOG4278|consen  512 SFAEIH  517 (1157)
T ss_pred             cHHHHH
Confidence            998884

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=4.1e-37  Score=309.10  Aligned_cols=272  Identities=17%  Similarity=0.184  Sum_probs=188.6

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEc----------------CCCceEEEEEeehhhHHhhhhhccc-CCCchhhHHHH
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDV----------------ESSESFALKVIWRDLIEKKSKELTN-NDNGDKYRRIS   74 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~----------------~~~~~vAiK~~~~~~~~~~~~~~~~-~~~~~~~~~~~   74 (426)
                      .++.++|++.++||+|+||+||++...                ..++.||||.+.............. ...........
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~  220 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM  220 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence            367889999999999999999999752                3456799999854321111000000 00001112344


Q ss_pred             HHHHHHHhcCCCCc-----ceeeeeeec--------CCeEEEEEeccCCCChHHHHHHhcc-------------------
Q 014344           75 FEQRVLRNVEHPLL-----PRLRGVLST--------DKFVGYAIDYCPGRDLHSLRKQQSE-------------------  122 (426)
Q Consensus        75 ~E~~il~~l~hp~i-----v~l~~~~~~--------~~~~~lV~Ey~~gg~L~~l~~~~~~-------------------  122 (426)
                      .|+.++.++.|.++     ++++++|..        +...++||||+.+++|.+++.....                   
T Consensus       221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            57778888876554     566666532        4568999999999999998764211                   


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhcccccccc
Q 014344          123 ---QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI  199 (426)
Q Consensus       123 ---~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~  199 (426)
                         ..++...++.++.|++.||.|||+.+|+||||||+|||++.++.+||+|||++..+.....                
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~----------------  364 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN----------------  364 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----------------
Confidence               1245678899999999999999999999999999999999999999999999865432110                


Q ss_pred             ccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC-------------------
Q 014344          200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG-------------------  260 (426)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------------------  260 (426)
                                                             .......+|+.|+|||.+....                   
T Consensus       365 ---------------------------------------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~  405 (507)
T PLN03224        365 ---------------------------------------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAW  405 (507)
T ss_pred             ---------------------------------------cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHH
Confidence                                                   0011123588999999986432                   


Q ss_pred             -C--ChhhHHHHHHHHHHHHHhCCC-CCCCCCHH-----------HHHHHHhcC---CCCCCCCCHHHHHHHHHHhccCC
Q 014344          261 -H--DFAVDWWSLGVVLHEMLYGAT-PFRGSSRK-----------ETFYRILCR---PPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       261 -~--~~~~DiwSlG~il~ell~g~~-pf~~~~~~-----------~~~~~i~~~---~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                       |  ....|+||+||++|+|++|.. ||......           ..+..+...   .+.....+...+|||.+||..+|
T Consensus       406 ~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~  485 (507)
T PLN03224        406 LYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRD  485 (507)
T ss_pred             hcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCC
Confidence             1  124799999999999999875 77543211           111111111   12223457789999999999876


Q ss_pred             ---CCCCChHHHhcCCCcC
Q 014344          323 ---TKRIGVEEIKGHEFFK  338 (426)
Q Consensus       323 ---~~R~s~~eil~hp~f~  338 (426)
                         .+|+|++|+|+||||.
T Consensus       486 ~~~~~RlSa~eaL~Hp~f~  504 (507)
T PLN03224        486 QANRGRLSVGQALSHRFFL  504 (507)
T ss_pred             CCcccCCCHHHHhCCCCcC
Confidence               6899999999999995

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-39  Score=323.80  Aligned_cols=264  Identities=30%  Similarity=0.428  Sum_probs=205.8

Q ss_pred             eeecccCceE-EEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeeecCC
Q 014344           22 SALGRGAKGV-VFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLSTDK   99 (426)
Q Consensus        22 ~~LG~G~~g~-V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~   99 (426)
                      +.+|.|+.|+ ||++.  ..|+.||||.+-.+                ....+.+|+..|+.-+ |||||++++.-++.+
T Consensus       515 eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e----------------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q  576 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGV--YEGREVAVKRLLEE----------------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ  576 (903)
T ss_pred             HHcccCCCCcEEEEEe--eCCceehHHHHhhH----------------hHHHHHHHHHHHHhccCCCceEEEEeeccCCc
Confidence            5679999986 78777  56889999987332                3456788999999986 999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---CC--cEEEecc
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---NG--HIMLVDF  172 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~g--~ikL~DF  172 (426)
                      .+||+.|+|. .+|.++++..  ..........+..+.|++.||++||+.+||||||||.||||+.   ++  .++|+||
T Consensus       577 F~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDf  655 (903)
T KOG1027|consen  577 FLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDF  655 (903)
T ss_pred             eEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccc
Confidence            9999999996 9999999874  1111222456788999999999999999999999999999986   34  6899999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.+..+..                                                     +-.+.....||-+|+|
T Consensus       656 glsKkl~~~~s-----------------------------------------------------S~~r~s~~sGt~GW~A  682 (903)
T KOG1027|consen  656 GLSKKLAGGKS-----------------------------------------------------SFSRLSGGSGTSGWQA  682 (903)
T ss_pred             ccccccCCCcc-----------------------------------------------------hhhcccCCCCcccccC
Confidence            99999864321                                                     1122344569999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCCCCCC--CCH--HHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYG-ATPFRGSSRKETFYRILCRPPDLVG--EPT--PLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~~~~~~--~~~--~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++....-+.++||+|+||++|..++| ..||......+  .+|+........  .-.  .+.|||.+||.++|..||+
T Consensus       683 PE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPs  760 (903)
T KOG1027|consen  683 PEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPS  760 (903)
T ss_pred             HHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCC
Confidence            9999998888899999999999999885 99997654433  456544433221  112  7899999999999999999


Q ss_pred             hHHHhcCCCcCCCChhhhhhccCCCCCCCCCCCCCC
Q 014344          328 VEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN  363 (426)
Q Consensus       328 ~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (426)
                      |.++|.||||    |+...+......+..+++.++.
T Consensus       761 a~~VL~HPlF----W~~ekrL~Fl~dvSDRvE~e~r  792 (903)
T KOG1027|consen  761 ATDVLNHPLF----WDSEKRLSFLRDVSDRVEKENR  792 (903)
T ss_pred             HHHHhCCCcc----CChHHHHHHHHhhhhhhhhhhc
Confidence            9999999999    6555444444455555544433

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=1.3e-36  Score=279.75  Aligned_cols=239  Identities=43%  Similarity=0.720  Sum_probs=200.6

Q ss_pred             CceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEEEEec
Q 014344           28 AKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDY  107 (426)
Q Consensus        28 ~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~Ey  107 (426)
                      +||.||+|.+..+++.+|+|++......            ...+.+..|+.++++++|+||+++++.+......++++||
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~------------~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   68 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIK------------KKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEY   68 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccc------------cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeC
Confidence            5899999999989999999998543211            1156788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCc
Q 014344          108 CPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP  187 (426)
Q Consensus       108 ~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~  187 (426)
                      +.+++|.+++.....  ++...+..++.+++.+|.+||+.|++|+||+|.||+++.++.++|+|||.+.......     
T Consensus        69 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----  141 (244)
T smart00220       69 CDGGDLFDLLKKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----  141 (244)
T ss_pred             CCCCCHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence            999999998875433  8899999999999999999999999999999999999999999999999987764211     


Q ss_pred             chhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHH
Q 014344          188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDW  267 (426)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  267 (426)
                                                                          ......++..|+|||.+.+..++.++|+
T Consensus       142 ----------------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di  169 (244)
T smart00220      142 ----------------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDV  169 (244)
T ss_pred             ----------------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhH
Confidence                                                                1223457888999999998888999999


Q ss_pred             HHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCCCCCC-C---CCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          268 WSLGVVLHEMLYGATPFRG-SSRKETFYRILCRPPDLV-G---EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       268 wSlG~il~ell~g~~pf~~-~~~~~~~~~i~~~~~~~~-~---~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      ||||+++|+|++|..||.. .........+........ .   .+..+.+++.+||..+|++||++.++++||||
T Consensus       170 ~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      170 WSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            9999999999999999988 443333333322222211 1   67889999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-38  Score=308.32  Aligned_cols=254  Identities=20%  Similarity=0.293  Sum_probs=212.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcC-CCc--eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVE-SSE--SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~-~~~--~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .++..++++||+|+||+||.+.+.. +|+  .||||++....+            ......|.+|+.+|.+|+|||+++|
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l------------~~~mddflrEas~M~~L~H~hliRL  176 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL------------NAIMDDFLREASHMLKLQHPHLIRL  176 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc------------chhHHHHHHHHHHHHhccCcceeEE
Confidence            3457788999999999999998864 343  599999844322            1256789999999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ||+..+ ..+.+|+|+|++|+|.+.++......|.......|+.||+.|+.||.++++|||||...|+||-....|||+|
T Consensus       177 yGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~D  255 (1039)
T KOG0199|consen  177 YGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICD  255 (1039)
T ss_pred             eeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeec
Confidence            999877 7889999999999999988776666799999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      |||.+.+.......                                                     ......--...|+
T Consensus       256 FGLmRaLg~ned~Y-----------------------------------------------------vm~p~rkvPfAWC  282 (1039)
T KOG0199|consen  256 FGLMRALGENEDMY-----------------------------------------------------VMAPQRKVPFAWC  282 (1039)
T ss_pred             ccceeccCCCCcce-----------------------------------------------------EecCCCcCccccc
Confidence            99998875322100                                                     0001111344699


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||.++...++.++|+|++||++|||++ |..||.|.....++.+|-..  .+....++.++.+++..||..+|++|||+
T Consensus       283 aPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptF  362 (1039)
T KOG0199|consen  283 APESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTF  362 (1039)
T ss_pred             CHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccH
Confidence            9999999999999999999999999995 99999999998888887522  24445678999999999999999999999


Q ss_pred             HHHhcC
Q 014344          329 EEIKGH  334 (426)
Q Consensus       329 ~eil~h  334 (426)
                      ..|...
T Consensus       363 sair~~  368 (1039)
T KOG0199|consen  363 SAIRED  368 (1039)
T ss_pred             HHHHHh
Confidence            888643

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-38  Score=304.77  Aligned_cols=210  Identities=26%  Similarity=0.451  Sum_probs=185.2

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC---CCCc
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE---HPLL   88 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~i   88 (426)
                      .-++.+|..++.||.|+||.|++|.++.+...|+||.+.|+++-..+.-.     ...+-.+-.|+.||..|+   |+||
T Consensus       557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvr-----DrkLGtVp~EIqIla~l~~~sH~NI  631 (772)
T KOG1152|consen  557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVR-----DRKLGTVPSEIQILATLNKHSHENI  631 (772)
T ss_pred             ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhc-----ccccCccchhHHHHHHhhhcCccch
Confidence            35678899999999999999999999999999999999998876554332     223446777999999998   9999


Q ss_pred             ceeeeeeecCCeEEEEEecc-CCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           89 PRLRGVLSTDKFVGYAIDYC-PGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~-~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ++++++|++++++||+||-- +|.||++++....+  ++|.+++.|++||+.|+++||++||||||||-||+.++.+|.+
T Consensus       632 lKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~--m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~  709 (772)
T KOG1152|consen  632 LKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPR--MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFV  709 (772)
T ss_pred             hhhhheeecCCeeEEEecCCCCCcchhhhhhccCc--cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeE
Confidence            99999999999999999965 46799999987654  9999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||.|.....+                                                          -...|+||
T Consensus       710 klidfgsaa~~ksg----------------------------------------------------------pfd~f~gt  731 (772)
T KOG1152|consen  710 KLIDFGSAAYTKSG----------------------------------------------------------PFDVFVGT  731 (772)
T ss_pred             EEeeccchhhhcCC----------------------------------------------------------Ccceeeee
Confidence            99999998765422                                                          24578999


Q ss_pred             CCCccchhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCC
Q 014344          248 EEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRG  286 (426)
Q Consensus       248 ~~y~aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~  286 (426)
                      ..|.|||++.|..| +..-||||||++||.+++..-||..
T Consensus       732 v~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  732 VDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             ccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            99999999999888 6889999999999999999999863

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-38  Score=309.92  Aligned_cols=268  Identities=27%  Similarity=0.458  Sum_probs=226.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .-.+|+++.++|+|+||-||+|+++.+++..|+|+++..             ..+.+.-++.|+-+++-++|||||.+++
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe-------------p~dd~~~iqqei~~~~dc~h~nivay~g   79 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE-------------PGDDFSGIQQEIGMLRDCRHPNIVAYFG   79 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeecc-------------CCccccccccceeeeecCCCcChHHHHh
Confidence            456899999999999999999999999999999999442             3345677888999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      .+-....+++.||||.||+|.+.-+  ..+++++.++.+.+++.+.||+|||++|=+|||||-.|||+++.|.+||+|||
T Consensus        80 sylr~dklwicMEycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfg  157 (829)
T KOG0576|consen   80 SYLRRDKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFG  157 (829)
T ss_pred             hhhhhcCcEEEEEecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccC
Confidence            9999999999999999999998743  34569999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      .+..+...                                                        ..+..+|.|||.||||
T Consensus       158 vsaqitat--------------------------------------------------------i~KrksfiGtpywmap  181 (829)
T KOG0576|consen  158 VSAQITAT--------------------------------------------------------IAKRKSFIGTPYWMAP  181 (829)
T ss_pred             chhhhhhh--------------------------------------------------------hhhhhcccCCccccch
Confidence            99877422                                                        2456788999999999


Q ss_pred             hhh---cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCCCC---CCCHHHHHHHHHHhccCCCC
Q 014344          254 EII---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPDLV---GEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       254 E~~---~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~~~---~~~~~~~~li~~~L~~dP~~  324 (426)
                      |+-   +..+|...+|+|++|++..|+.--++|.....+.........   .++.+.   .+++.+.+|++.+|.++|.+
T Consensus       182 Evaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKk  261 (829)
T KOG0576|consen  182 EVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKK  261 (829)
T ss_pred             hHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCcc
Confidence            985   457799999999999999999998999877777665554432   233222   34677899999999999999


Q ss_pred             CCChHHHhcCCCcCCC-----ChhhhhhccCCC
Q 014344          325 RIGVEEIKGHEFFKGV-----NWELLLKISRPP  352 (426)
Q Consensus       325 R~s~~eil~hp~f~~~-----~~~~~~~~~~~~  352 (426)
                      ||+++.+|.|||...-     .-+.+.+...|+
T Consensus       262 RptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~  294 (829)
T KOG0576|consen  262 RPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPN  294 (829)
T ss_pred             CCChhhheeceeeccchhhHHHHHHHHHccCCC
Confidence            9999999999999753     223344455554

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=7.9e-37  Score=286.23  Aligned_cols=291  Identities=25%  Similarity=0.388  Sum_probs=205.5

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcC---CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcce
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVE---SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPR   90 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~   90 (426)
                      .+.|.++.+||.|+|++||++.+..   .++.||+|.+...               ....++..|+++|..+. +.||+.
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t---------------s~p~ri~~El~~L~~~gG~~ni~~   99 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT---------------SSPSRILNELEMLYRLGGSDNIIK   99 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc---------------cCchHHHHHHHHHHHhccchhhhc
Confidence            4568999999999999999999987   7889999988432               23457889999999996 899999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-CCcEEE
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-NGHIML  169 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-~g~ikL  169 (426)
                      +.+++...+.+.+||||++..+..++...     ++...++.|++.++.||.++|.+|||||||||.|+|.+. .+.-.|
T Consensus       100 ~~~~~rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~L  174 (418)
T KOG1167|consen  100 LNGCFRNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVL  174 (418)
T ss_pred             chhhhccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceE
Confidence            99999999999999999999988887653     778999999999999999999999999999999999985 578899


Q ss_pred             ecccccccCCCCCCCCCcchhhcccc---ccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANT---RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +|||+|.................-..   ........+.....++.|.....               ........-...|
T Consensus       175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~---------------~~~r~~~~anrAG  239 (418)
T KOG1167|consen  175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRC---------------NDGRPSERANRAG  239 (418)
T ss_pred             EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceecc---------------CCCccceecccCC
Confidence            99999985322111111000000000   00000000000000011100000               0111123335579


Q ss_pred             CCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH----------------------------
Q 014344          247 TEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRI----------------------------  296 (426)
Q Consensus       247 t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i----------------------------  296 (426)
                      |++|+|||++.. ...+.++||||.|||+..+++++.||...... .....+                            
T Consensus       240 T~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~  319 (418)
T KOG1167|consen  240 TPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIP  319 (418)
T ss_pred             CCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecccccc
Confidence            999999999765 55788999999999999999999998543211 100000                            


Q ss_pred             -----------h-----cCCCC-------CCC-CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          297 -----------L-----CRPPD-------LVG-EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       297 -----------~-----~~~~~-------~~~-~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                                 +     .....       ..+ .+..+.||+.+||+.||.+|+|++++|+||||...
T Consensus       320 ~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  320 TIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             ccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence                       0     00000       001 13468899999999999999999999999999854

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1.6e-35  Score=325.83  Aligned_cols=235  Identities=25%  Similarity=0.330  Sum_probs=184.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|...+.||+|+||.||+|++..++..||+|.+....                 .....|+.++++++||||+++++++.
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----------------~~~~~~~~~l~~l~HpnIv~~~~~~~  753 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN-----------------SIPSSEIADMGKLQHPNIVKLIGLCR  753 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc-----------------cccHHHHHHHhhCCCCCcceEEEEEE
Confidence            4566788999999999999999999999999874211                 01123688999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH---NMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH---~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++...|+|||||+||+|.++++.     +++..+..++.||+.||+|||   +.+|+||||||+||+++.++..++. ||
T Consensus       754 ~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~  827 (968)
T PLN00113        754 SEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LS  827 (968)
T ss_pred             cCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ec
Confidence            99999999999999999998852     788999999999999999999   6699999999999999988887775 55


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      .......                                                            .....||+.||||
T Consensus       828 ~~~~~~~------------------------------------------------------------~~~~~~t~~y~aP  847 (968)
T PLN00113        828 LPGLLCT------------------------------------------------------------DTKCFISSAYVAP  847 (968)
T ss_pred             ccccccc------------------------------------------------------------CCCccccccccCc
Confidence            4432210                                                            1122588999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcC--------CCCCC-------CCCHHHHHHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCR--------PPDLV-------GEPTPLRNLI  314 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~--------~~~~~-------~~~~~~~~li  314 (426)
                      |++.+..++.++|||||||++|||++|+.||.....    ...+.+....        .+...       .....+.+++
T Consensus       848 E~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  927 (968)
T PLN00113        848 ETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLA  927 (968)
T ss_pred             ccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHH
Confidence            999999999999999999999999999999854321    1111111000        01110       1122467899


Q ss_pred             HHHhccCCCCCCChHHHhcC
Q 014344          315 RRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+||+.||++|||+.|+++.
T Consensus       928 ~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        928 LHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HhhCcCCchhCcCHHHHHHH
Confidence            99999999999999999864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-36  Score=254.63  Aligned_cols=222  Identities=26%  Similarity=0.428  Sum_probs=181.6

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcce
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPR   90 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~   90 (426)
                      ++.-++..-+..||+|+||.|=+.++..+|...|+|.+....            +....++...|+++.... .+|++|.
T Consensus        42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv------------n~q~q~r~L~dldi~~r~~~CPf~V~  109 (282)
T KOG0984|consen   42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV------------NSQEQKRLLMDLDIIMRTVDCPFTVH  109 (282)
T ss_pred             ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc------------ChHHHHHHHHhhhhhccCCCCCeEEE
Confidence            344456677889999999999999999999999999884432            223456677788876665 6899999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeeccCCcE
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~--~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~~g~i  167 (426)
                      +++....+..+++.||.|. .+|..+-+.  ..++.++|..+-.++..++.||.|||++ .+||||+||.|||++.+|+|
T Consensus       110 FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqV  188 (282)
T KOG0984|consen  110 FYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQV  188 (282)
T ss_pred             eehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcE
Confidence            9999999999999999995 778776432  2356699999999999999999999975 99999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      |+||||.+..+..+..                                                         .+.-.|.
T Consensus       189 KiCDFGIsG~L~dSiA---------------------------------------------------------kt~daGC  211 (282)
T KOG0984|consen  189 KICDFGISGYLVDSIA---------------------------------------------------------KTMDAGC  211 (282)
T ss_pred             EEcccccceeehhhhH---------------------------------------------------------HHHhcCC
Confidence            9999999987743210                                                         0012378


Q ss_pred             CCCccchhhcC----CCCChhhHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCCCCC
Q 014344          248 EEYVAPEIIEG----KGHDFAVDWWSLGVVLHEMLYGATPFRG-SSRKETFYRILCRPPDL  303 (426)
Q Consensus       248 ~~y~aPE~~~~----~~~~~~~DiwSlG~il~ell~g~~pf~~-~~~~~~~~~i~~~~~~~  303 (426)
                      ..|||||.+..    .+|+-++||||||+++.||.+++.||.. .++-+++.+++..++..
T Consensus       212 kpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~  272 (282)
T KOG0984|consen  212 KPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQ  272 (282)
T ss_pred             CccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCC
Confidence            88999999753    4789999999999999999999999975 56778888888766543

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-34  Score=288.46  Aligned_cols=252  Identities=21%  Similarity=0.273  Sum_probs=207.1

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCc----eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSE----SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~----~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      ++-...+-.++||+|+||+||++.....|+    +||||++.....            .....++..|+-+|.+|+|||+
T Consensus       693 ~kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~------------~~~s~e~LdeAl~masldHpnl  760 (1177)
T KOG1025|consen  693 LKETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS------------PKASIELLDEALRMASLDHPNL  760 (1177)
T ss_pred             chhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC------------chhhHHHHHHHHHHhcCCCchH
Confidence            344456677899999999999999865555    588888744322            2335678889999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++..... +.||++|+++|.|.++.+.++ ..+-......|..||+.|+.|||++.++||||-.+|||+....++|
T Consensus       761 ~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvk  838 (1177)
T KOG1025|consen  761 LRLLGVCMLST-LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVK  838 (1177)
T ss_pred             HHHhhhcccch-HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEE
Confidence            99999997766 889999999999999988765 4588899999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.+.+......                                                      ....--.+
T Consensus       839 itdfgla~ll~~d~~ey~------------------------------------------------------~~~gK~pi  864 (1177)
T KOG1025|consen  839 ITDFGLAKLLAPDEKEYS------------------------------------------------------APGGKVPI  864 (1177)
T ss_pred             EEecchhhccCccccccc------------------------------------------------------ccccccCc
Confidence            999999998865432111                                                      01111356


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh--cCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      .|||-|.+....|+.++||||+||++||++| |..|+.+....++-..+.  .+.+.++.++-++..++.+||..|+..|
T Consensus       865 kwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~r  944 (1177)
T KOG1025|consen  865 KWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSR  944 (1177)
T ss_pred             HHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccC
Confidence            7999999999999999999999999999997 999999988776543332  2234455667889999999999999999


Q ss_pred             CChHHHh
Q 014344          326 IGVEEIK  332 (426)
Q Consensus       326 ~s~~eil  332 (426)
                      |+++++.
T Consensus       945 p~fkel~  951 (1177)
T KOG1025|consen  945 PTFKELA  951 (1177)
T ss_pred             ccHHHHH
Confidence            9998874

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-34  Score=271.29  Aligned_cols=245  Identities=22%  Similarity=0.355  Sum_probs=191.4

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh--cCCCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN--VEHPL   87 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~   87 (426)
                      .+-+++...+++..||+|.||.||+|.-  +++.||||++..                ...+.+..|.+|.+.  ++|+|
T Consensus       204 spl~~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~----------------~~kqs~~~Ek~Iy~lp~m~h~n  265 (534)
T KOG3653|consen  204 SPLLELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE----------------QEKQSFQNEKNIYSLPGMKHEN  265 (534)
T ss_pred             cccccCCchhhHHHhhcCccceeehhhc--cCceeEEEecCH----------------HHHHHHHhHHHHHhccCccchh
Confidence            4556777899999999999999999985  459999999833                345667778888776  57999


Q ss_pred             cceeeeeeecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---------CCcccCC
Q 014344           88 LPRLRGVLSTDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM---------GIVYRDL  154 (426)
Q Consensus        88 iv~l~~~~~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~---------giiHrDl  154 (426)
                      |++++++-+...    .++||++|.+.|+|.+|+..+.   ++.....+++..|+.||+|||+-         .|+||||
T Consensus       266 Il~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDl  342 (534)
T KOG3653|consen  266 ILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDL  342 (534)
T ss_pred             HHHhhchhccCCccccceeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccc
Confidence            999999876554    7899999999999999998754   89999999999999999999963         5999999


Q ss_pred             CCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          155 KPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSD  234 (426)
Q Consensus       155 Kp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (426)
                      |..||||.+|+..-|+|||||..+.++.+..                                                 
T Consensus       343 kSkNVLvK~DlTccIaDFGLAl~~~p~~~~~-------------------------------------------------  373 (534)
T KOG3653|consen  343 KSKNVLVKNDLTCCIADFGLALRLEPGKPQG-------------------------------------------------  373 (534)
T ss_pred             cccceEEccCCcEEeeccceeEEecCCCCCc-------------------------------------------------
Confidence            9999999999999999999999987543221                                                 


Q ss_pred             CCCCCCccccccCCCCccchhhcCC-CCC-----hhhHHHHHHHHHHHHHhCCCCCC-C----------------CCHHH
Q 014344          235 SDSSEKSNSFVGTEEYVAPEIIEGK-GHD-----FAVDWWSLGVVLHEMLYGATPFR-G----------------SSRKE  291 (426)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-----~~~DiwSlG~il~ell~g~~pf~-~----------------~~~~~  291 (426)
                           .+..-|||.+|||||++.|. .+.     .+.||||+|.+||||+++..-+. +                ++..+
T Consensus       374 -----d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~  448 (534)
T KOG3653|consen  374 -----DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEE  448 (534)
T ss_pred             -----chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHH
Confidence                 12235899999999999773 222     47899999999999997543332 1                12222


Q ss_pred             HHHHHhc--CCCCCCC------CCHHHHHHHHHHhccCCCCCCChH
Q 014344          292 TFYRILC--RPPDLVG------EPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       292 ~~~~i~~--~~~~~~~------~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      +...++.  ..|.++.      ....+++.|..||..||+.|+|+.
T Consensus       449 mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  449 MQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             HHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            2222222  2222221      134578999999999999999975

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-33  Score=292.05  Aligned_cols=257  Identities=23%  Similarity=0.333  Sum_probs=209.4

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc---C----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV---E----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN   82 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~---~----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~   82 (426)
                      .+++..++..+.+.||+|+||.|++|.-.   .    ....||+|.+....            .....+.+..|+.+|+.
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~------------~~~~~~~~~~El~~m~~  357 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA------------SSSEKKDLMSELNVLKE  357 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc------------CcHHHHHHHHHHHHHHH
Confidence            56677777788899999999999999753   1    13469999874432            22456789999999999


Q ss_pred             cC-CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc------------c--CCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           83 VE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS------------E--QMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        83 l~-hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~------------~--~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      +. ||||+.+++++.....+++|+|||..|+|.++++..+            .  ..++......++.||+.|++||++.
T Consensus       358 ~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~  437 (609)
T KOG0200|consen  358 LGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV  437 (609)
T ss_pred             hcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence            85 9999999999999999999999999999999987655            0  1388899999999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      .+|||||-.+|||++.+..+||+|||+|+.........                                          
T Consensus       438 ~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~------------------------------------------  475 (609)
T KOG0200|consen  438 PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYR------------------------------------------  475 (609)
T ss_pred             CccchhhhhhhEEecCCCEEEEccccceeccCCCCceE------------------------------------------
Confidence            99999999999999999999999999998654322110                                          


Q ss_pred             CCCCCCCCCCCCCcccccc--CCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHh--cCCC
Q 014344          228 DPPSRSDSDSSEKSNSFVG--TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSS-RKETFYRIL--CRPP  301 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~-~~~~~~~i~--~~~~  301 (426)
                                   ...-.|  ...|||||.+....|+.++||||+||+|||+.+ |..||.+.. ..+.+..+.  .+..
T Consensus       476 -------------~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~  542 (609)
T KOG0200|consen  476 -------------TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRME  542 (609)
T ss_pred             -------------ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCC
Confidence                         000012  334999999999999999999999999999986 999999855 444444333  2344


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       302 ~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .+..++.++.++++.||..+|++||++.++..
T Consensus       543 ~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  543 QPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            55566899999999999999999999998875

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-33  Score=260.06  Aligned_cols=245  Identities=22%  Similarity=0.291  Sum_probs=185.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHH--HhcCCCCcceeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL--RNVEHPLLPRLRG   93 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il--~~l~hp~iv~l~~   93 (426)
                      .+.++.+.||+|.||.||+++.  -|+.||||++....                -+...+|.+|.  ..|+|+||+.+++
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd----------------E~SWfrEtEIYqTvmLRHENILgFIa  272 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD----------------ERSWFRETEIYQTVMLRHENILGFIA  272 (513)
T ss_pred             heeEEEEEecCccccceeeccc--cCCceEEEEecccc----------------hhhhhhHHHHHHHHHhccchhhhhhh
Confidence            3578999999999999999985  57899999994321                12334455554  4579999999998


Q ss_pred             eeecC----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCCCCeee
Q 014344           94 VLSTD----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM--------GIVYRDLKPENIMI  161 (426)
Q Consensus        94 ~~~~~----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~--------giiHrDlKp~NiLl  161 (426)
                      .-..+    ..+|||++|.+.|+|++++.+.   .++.+....++..++.||++||..        .|+|||||..|||+
T Consensus       273 aD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV  349 (513)
T KOG2052|consen  273 ADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  349 (513)
T ss_pred             ccccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE
Confidence            76443    3689999999999999999874   389999999999999999999963        49999999999999


Q ss_pred             ccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          162 QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       162 ~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                      ..+|..-|+|+|||.........                                                    -....
T Consensus       350 Kkn~~C~IADLGLAv~h~~~t~~----------------------------------------------------idi~~  377 (513)
T KOG2052|consen  350 KKNGTCCIADLGLAVRHDSDTDT----------------------------------------------------IDIPP  377 (513)
T ss_pred             ccCCcEEEeeceeeEEecccCCc----------------------------------------------------ccCCC
Confidence            99999999999999876533211                                                    12245


Q ss_pred             cccccCCCCccchhhcCCC----C--ChhhHHHHHHHHHHHHHh----------CCCCCCCCC----HHHHHHHHhc---
Q 014344          242 NSFVGTEEYVAPEIIEGKG----H--DFAVDWWSLGVVLHEMLY----------GATPFRGSS----RKETFYRILC---  298 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~~----~--~~~~DiwSlG~il~ell~----------g~~pf~~~~----~~~~~~~i~~---  298 (426)
                      +..|||.+|||||++...-    +  -..+||||||.++||++-          -++||.+.-    ..+...+++.   
T Consensus       378 N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~  457 (513)
T KOG2052|consen  378 NPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQK  457 (513)
T ss_pred             CCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecc
Confidence            6779999999999986432    1  146899999999999984          257775432    2233344432   


Q ss_pred             -CCCCCCCC--C---HHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          299 -RPPDLVGE--P---TPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       299 -~~~~~~~~--~---~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                       +|.....+  .   ..+..+|+.||..+|.-|.|+--|.+
T Consensus       458 ~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  458 LRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             cCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence             12111111  1   23567999999999999999877754

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-34  Score=284.93  Aligned_cols=256  Identities=39%  Similarity=0.673  Sum_probs=215.7

Q ss_pred             eecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeeecC
Q 014344           23 ALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLSTD   98 (426)
Q Consensus        23 ~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~   98 (426)
                      ++|.|+||.|++++..   ..+..||+|+..+.....+.+.           ....|..++.... ||++++++..|+++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-----------~t~~er~il~~~~~~~f~v~lhyafqt~   69 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-----------HTKQERIILAFVHNTPFLVKLHYAFQTD   69 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-----------ccccHHHHHhhccCCCceeeeeeeeccc
Confidence            4799999999999864   4577899999977655433211           3445788888887 99999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344           99 KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      ..+++++++..||+|......  ..++.+...+++..+++.|++++|+.||+|||+|++||+++.+|++++.|||+++..
T Consensus        70 ~kl~l~ld~~rgg~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~  147 (612)
T KOG0603|consen   70 GKLYLILDFLRGGDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEA  147 (612)
T ss_pred             cchhHhhhhcccchhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHh
Confidence            999999999999999876543  456999999999999999999999999999999999999999999999999998865


Q ss_pred             CCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC
Q 014344          179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG  258 (426)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  258 (426)
                      ...                                                            ...|||..|||||++. 
T Consensus       148 v~~------------------------------------------------------------~~~cgt~eymApEI~~-  166 (612)
T KOG0603|consen  148 VKE------------------------------------------------------------KIACGTYEYRAPEIIN-  166 (612)
T ss_pred             Hhh------------------------------------------------------------hhcccchhhhhhHhhh-
Confidence            311                                                            1117999999999998 


Q ss_pred             CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHhccCCCCCCC-----hHHHh
Q 014344          259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-RPPDLVGEPTPLRNLIRRLLEKDPTKRIG-----VEEIK  332 (426)
Q Consensus       259 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~eil  332 (426)
                       ++..++|+||+|++++||++|..||.+    ++..+|+. ....+...+..++++++.++..+|.+|..     +.|++
T Consensus       167 -gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik  241 (612)
T KOG0603|consen  167 -GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIK  241 (612)
T ss_pred             -ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHh
Confidence             678899999999999999999999998    66777776 34444455778899999999999999996     57999


Q ss_pred             cCCCcCCCChhhhhhccCCCCCCCC
Q 014344          333 GHEFFKGVNWELLLKISRPPNIPAR  357 (426)
Q Consensus       333 ~hp~f~~~~~~~~~~~~~~~~~~~~  357 (426)
                      +|+||+.++|..+....+++.+.+.
T Consensus       242 ~h~f~~~i~~~~l~~r~~~~~fkp~  266 (612)
T KOG0603|consen  242 QHEFFQSIDWNELEARSRPPPFKPG  266 (612)
T ss_pred             ccchheeeeHhhHhhcCCCCCCCCc
Confidence            9999999999988776666555443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=2.1e-33  Score=301.97  Aligned_cols=233  Identities=18%  Similarity=0.233  Sum_probs=160.6

Q ss_pred             HhcCC-CCcceeeeee-------ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 014344           81 RNVEH-PLLPRLRGVL-------STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYR  152 (426)
Q Consensus        81 ~~l~h-p~iv~l~~~~-------~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHr  152 (426)
                      +.+.| +||..++++|       ..+..+++++||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHr  104 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVH  104 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            34456 5777788877       3345788889987 57999998643 3459999999999999999999999999999


Q ss_pred             CCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCC-CCCCCCC
Q 014344          153 DLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPR-IGPDPPS  231 (426)
Q Consensus       153 DlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  231 (426)
                      ||||+||||+..|.+|++|||++........                     ...+.++.|........... .......
T Consensus       105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~---------------------~~~ki~DfG~a~~~~~~~~~~~~~~~~~  163 (793)
T PLN00181        105 NVRPSCFVMSSFNHVSFIESASCSDSGSDED---------------------ATTKSREIGSSRREEILSERRIEKLEEV  163 (793)
T ss_pred             cCCchhEEEcccCcEEEeeccccCccccccc---------------------Ccccccccccccccccccccchhhhhcc
Confidence            9999999999999999999998765321100                     01122222222111000000 0000000


Q ss_pred             CCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCCCCHH
Q 014344          232 RSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEPTP  309 (426)
Q Consensus       232 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~  309 (426)
                      . ...........+||+.|||||++.+..|+.++|||||||+||||++|.+|+.....  .+..+.  ..++......+.
T Consensus       164 ~-~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  240 (793)
T PLN00181        164 K-KQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLPPQILLNWPK  240 (793)
T ss_pred             c-cCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcChhhhhcCHH
Confidence            0 00001112235799999999999999999999999999999999999998764322  111111  112222233456


Q ss_pred             HHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ..+++.+||.++|.+||++.||++||||..
T Consensus       241 ~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        241 EASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             HHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            779999999999999999999999999975

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=100.00  E-value=1.8e-31  Score=239.41  Aligned_cols=213  Identities=37%  Similarity=0.642  Sum_probs=184.7

Q ss_pred             ecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEEE
Q 014344           24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGY  103 (426)
Q Consensus        24 LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~l  103 (426)
                      ||.|++|.||++.+..+++.+++|++.......            ....+.+|+.+++.+.|++|+++++++......++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~   68 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYL   68 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEE
Confidence            689999999999998889999999985432110            24578889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-CCcEEEecccccccCCCCC
Q 014344          104 AIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-NGHIMLVDFDLSTKLSPKT  182 (426)
Q Consensus       104 V~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-~g~ikL~DFgls~~~~~~~  182 (426)
                      ++||+.|++|.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+.......
T Consensus        69 ~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~  147 (215)
T cd00180          69 VMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK  147 (215)
T ss_pred             EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence            999999999999987542 34899999999999999999999999999999999999999 8999999999987654221


Q ss_pred             CCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCC-CC
Q 014344          183 PQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK-GH  261 (426)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~  261 (426)
                      .                                                        ......+...|++||.+... .+
T Consensus       148 ~--------------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~  171 (215)
T cd00180         148 S--------------------------------------------------------LLKTIVGTPAYMAPEVLLGKGYY  171 (215)
T ss_pred             c--------------------------------------------------------hhhcccCCCCccChhHhcccCCC
Confidence            0                                                        11223477889999999887 78


Q ss_pred             ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCC
Q 014344          262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHE  335 (426)
Q Consensus       262 ~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp  335 (426)
                      +.+.|+|++|+++++|                              ..+.+++.+|+..+|++||++.++++|+
T Consensus       172 ~~~~D~~~lg~~~~~l------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         172 SEKSDIWSLGVILYEL------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             CchhhhHHHHHHHHHH------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            8999999999999999                              5678999999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.98  E-value=1e-30  Score=238.12  Aligned_cols=216  Identities=36%  Similarity=0.608  Sum_probs=181.1

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |.+.+.||.|++|.||++.+..+++.+|+|.+......            .....+..|+..++.++|+|++++++.+..
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------------~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~   68 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE------------KQREEFLREIRILKKLKHPNIVKLYGVFED   68 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch------------HHHHHHHHHHHHHHhCCCCChhhheeeeec
Confidence            67889999999999999999988999999998554321            145678889999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ....++++||+++++|.+++...... +++..+..++.|++.+|.+||+.+++|+||+|.||+++.++.++|+|||++..
T Consensus        69 ~~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~  147 (225)
T smart00221       69 PEPLYLVMEYCEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARF  147 (225)
T ss_pred             CCceEEEEeccCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence            99999999999999999998765432 78999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh-
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII-  256 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-  256 (426)
                      .....                                                       ........++..|++||.+ 
T Consensus       148 ~~~~~-------------------------------------------------------~~~~~~~~~~~~~~~pe~~~  172 (225)
T smart00221      148 IHRDL-------------------------------------------------------AALLKTVKGTPFYLAPEVLL  172 (225)
T ss_pred             ecCcc-------------------------------------------------------cccccceeccCCcCCHhHhc
Confidence            64211                                                       0012234578889999998 


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCC-CCHH-HHHHHHhcCCC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRG-SSRK-ETFYRILCRPP  301 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~-~~~~-~~~~~i~~~~~  301 (426)
                      ....++.++|+||||+++|+|++|+.||.. .+.. .....+....+
T Consensus       173 ~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  219 (225)
T smart00221      173 GGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVP  219 (225)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCc
Confidence            667788899999999999999999999987 4444 44555554443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.8e-32  Score=241.85  Aligned_cols=252  Identities=21%  Similarity=0.304  Sum_probs=190.3

Q ss_pred             CCCCCCC-CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCC
Q 014344           10 IRSLDFS-CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPL   87 (426)
Q Consensus        10 ~~~l~~~-~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~   87 (426)
                      .+.+++. .|.|.+.||.|.||.+.+|+++.+...+++|.+.+...              ..+.|.+|...--.|. |.|
T Consensus        17 l~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t--------------t~~dF~rEfhY~~~Ls~H~h   82 (378)
T KOG1345|consen   17 LKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT--------------TQADFVREFHYSFFLSPHQH   82 (378)
T ss_pred             ccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh--------------hHHHHHHHhccceeeccchh
Confidence            3344443 59999999999999999999999999999999855432              3456777776655565 899


Q ss_pred             cceeee-eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc--C
Q 014344           88 LPRLRG-VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE--N  164 (426)
Q Consensus        88 iv~l~~-~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~--~  164 (426)
                      |+.-|+ .|++.+.++++||||+.|||.+-+..   ..+-+...+.++.|+++||+|+|++++||||||.+||||-.  .
T Consensus        83 Ii~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df  159 (378)
T KOG1345|consen   83 IIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADF  159 (378)
T ss_pred             hhHHHHHHhhcCceEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCc
Confidence            998776 57889999999999999999876554   33888999999999999999999999999999999999953  3


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      -.|||||||+++.......                                                        .   .
T Consensus       160 ~rvKlcDFG~t~k~g~tV~--------------------------------------------------------~---~  180 (378)
T KOG1345|consen  160 YRVKLCDFGLTRKVGTTVK--------------------------------------------------------Y---L  180 (378)
T ss_pred             cEEEeeecccccccCceeh--------------------------------------------------------h---h
Confidence            4899999999876532110                                                        0   0


Q ss_pred             ccCCCCccchhhcCC---C--CChhhHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhc-----CCCCCCCCCHHH
Q 014344          245 VGTEEYVAPEIIEGK---G--HDFAVDWWSLGVVLHEMLYGATPFRGSSRKE----TFYRILC-----RPPDLVGEPTPL  310 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~---~--~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~~~~i~~-----~~~~~~~~~~~~  310 (426)
                      --+..|.+||+..-.   .  ....+|+|.||+++|.+++|.+||.......    .+.+.+.     .|..+...++.+
T Consensus       181 ~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a  260 (378)
T KOG1345|consen  181 EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKA  260 (378)
T ss_pred             hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHH
Confidence            023458899976432   2  3578999999999999999999998554321    1222222     233334457788


Q ss_pred             HHHHHHHhccCCCCCC---ChHHHhcCCCc
Q 014344          311 RNLIRRLLEKDPTKRI---GVEEIKGHEFF  337 (426)
Q Consensus       311 ~~li~~~L~~dP~~R~---s~~eil~hp~f  337 (426)
                      ..+.++-|..+|++|-   ++..-....|.
T Consensus       261 ~r~Fkk~lt~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  261 LRLFKKSLTPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             HHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence            8999999999999994   45444444443

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=4.6e-29  Score=231.37  Aligned_cols=255  Identities=20%  Similarity=0.219  Sum_probs=204.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCc-----eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSE-----SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      +...+++....+-+|.||.||.+..+....     .|-+|.+            .....+-+...+..|-..+..+.|||
T Consensus       281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTv------------k~~AS~iQv~~~L~es~lly~~sH~n  348 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTV------------KQHASQIQVNLLLQESMLLYGASHPN  348 (563)
T ss_pred             hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHH------------HhcccHHHHHHHHHHHHHHhcCcCCC
Confidence            444568888899999999999996653322     2333332            12234456778899999999999999


Q ss_pred             cceeeeee-ecCCeEEEEEeccCCCChHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCee
Q 014344           88 LPRLRGVL-STDKFVGYAIDYCPGRDLHSLRKQQ------SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIM  160 (426)
Q Consensus        88 iv~l~~~~-~~~~~~~lV~Ey~~gg~L~~l~~~~------~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiL  160 (426)
                      +..+.++. ++....+.++.+..-|+|..++...      ..+.++..+...++.|+.+|++|||.+|+||.||..+|.+
T Consensus       349 ll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCv  428 (563)
T KOG1024|consen  349 LLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCV  428 (563)
T ss_pred             ccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcce
Confidence            99999986 4556677888888889999987732      2334777888889999999999999999999999999999


Q ss_pred             eccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          161 IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       161 l~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                      |++.-.+||+|=.+++.+-+..-...                                                      
T Consensus       429 Idd~LqVkltDsaLSRDLFP~DYhcL------------------------------------------------------  454 (563)
T KOG1024|consen  429 IDDQLQVKLTDSALSRDLFPGDYHCL------------------------------------------------------  454 (563)
T ss_pred             ehhheeEEeccchhccccCccccccc------------------------------------------------------
Confidence            99999999999999988765431110                                                      


Q ss_pred             ccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh--cCCCCCCCCCHHHHHHHHHH
Q 014344          241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLIRRL  317 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~li~~~  317 (426)
                      ...--....|||||.+....|+.++|+|||||++|||++ |+.|+..-++.++..-+.  .+...+.++|+++..++..|
T Consensus       455 GDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacC  534 (563)
T KOG1024|consen  455 GDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACC  534 (563)
T ss_pred             CCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHH
Confidence            000013567999999999999999999999999999997 999999999888776665  34566778999999999999


Q ss_pred             hccCCCCCCChHHHhc
Q 014344          318 LEKDPTKRIGVEEIKG  333 (426)
Q Consensus       318 L~~dP~~R~s~~eil~  333 (426)
                      |...|++||+++++..
T Consensus       535 WallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  535 WALLPEERPSFSQLVI  550 (563)
T ss_pred             HhcCcccCCCHHHHHH
Confidence            9999999999998864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.96  E-value=2.7e-30  Score=265.25  Aligned_cols=243  Identities=35%  Similarity=0.599  Sum_probs=185.0

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      -.-++|..++.|..|+||.||+++|+.+.+.+|+| ++++.+.-+                    .||.....|++|   
T Consensus        80 p~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lilR--------------------nilt~a~npfvv---  135 (1205)
T KOG0606|consen   80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLILR--------------------NILTFAGNPFVV---  135 (1205)
T ss_pred             CCccccceeEeeccCCCCceeeeeccccccchhhc-ccccchhhh--------------------ccccccCCccee---
Confidence            34468999999999999999999999999999995 443322111                    144445566655   


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                                        ||-..+++..+  .++.        +++.|++|||+-||+|||+||+|++|+.-|++|++||
T Consensus       136 ------------------gDc~tllk~~g--~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDf  187 (1205)
T KOG0606|consen  136 ------------------GDCATLLKNIG--PLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDF  187 (1205)
T ss_pred             ------------------chhhhhcccCC--CCcc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccch
Confidence                              55555555432  2443        3389999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+++..........        .+..|...                                 ...-.....||||.|.|
T Consensus       188 gLsk~GLms~atnl--------~eg~I~k~---------------------------------t~Ef~dKqvcgTPeyia  226 (1205)
T KOG0606|consen  188 GLSKKGLMSLATNL--------KEGHIEKD---------------------------------THEFQDKQVCGTPEYIA  226 (1205)
T ss_pred             hhhhhhhhhccchh--------hhcchHHH---------------------------------HHHhhhccccCCccccC
Confidence            99976533221100        00001100                                 00112234589999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC----CCCCHHHHHHHHHHhccCCCCCCC-
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL----VGEPTPLRNLIRRLLEKDPTKRIG-  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~s-  327 (426)
                      ||++...+|+..+|||++|+|+||.+.|+.||.+.++++.|...+.....+    ...+++++++|.+||+.+|..|.. 
T Consensus       227 PeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt  306 (1205)
T KOG0606|consen  227 PEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGT  306 (1205)
T ss_pred             hhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhccc
Confidence            999999999999999999999999999999999999999998876543333    345788999999999999999984 


Q ss_pred             --hHHHhcCCCcCCCChhhhhhc
Q 014344          328 --VEEIKGHEFFKGVNWELLLKI  348 (426)
Q Consensus       328 --~~eil~hp~f~~~~~~~~~~~  348 (426)
                        +-++.+|+||+.+||..+++.
T Consensus       307 ~ga~evk~h~ff~~LDw~~llRq  329 (1205)
T KOG0606|consen  307 GGALEVKQHGFFQLLDWKSLLRQ  329 (1205)
T ss_pred             chhhhhhhccceeecccchhhhh
Confidence              779999999999999977653

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=1.5e-29  Score=222.67  Aligned_cols=158  Identities=20%  Similarity=0.241  Sum_probs=127.3

Q ss_pred             CChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchh
Q 014344          111 RDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV  190 (426)
Q Consensus       111 g~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~  190 (426)
                      |+|.+++.... ..+++..++.++.||+.||.|||+++      ||+|||++.++.+|+  ||++......         
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------   62 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------   62 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc---------
Confidence            68899887543 45999999999999999999999998      999999999999999  9988654210         


Q ss_pred             hccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHH
Q 014344          191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSL  270 (426)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  270 (426)
                                                                          ...||+.|||||++.+..++.++|||||
T Consensus        63 ----------------------------------------------------~~~g~~~y~aPE~~~~~~~~~~~DiwSl   90 (176)
T smart00750       63 ----------------------------------------------------QSRVDPYFMAPEVIQGQSYTEKADIYSL   90 (176)
T ss_pred             ----------------------------------------------------cCCCcccccChHHhcCCCCcchhhHHHH
Confidence                                                                1148899999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCCC--------CCCCH--HHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          271 GVVLHEMLYGATPFRGSSRK-ETFYRILCRPPDL--------VGEPT--PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       271 G~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~--------~~~~~--~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                      ||++|||++|+.||...... ..+..+.......        ...+.  .+.++|.+||..+|.+||++.+++.|+|+.
T Consensus        91 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750       91 GITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            99999999999999765443 2222322211111        01122  589999999999999999999999999874

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.1e-30  Score=268.06  Aligned_cols=261  Identities=28%  Similarity=0.446  Sum_probs=201.4

Q ss_pred             EEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecC
Q 014344           19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTD   98 (426)
Q Consensus        19 ~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~   98 (426)
                      .....+|.|++|.|+.+......+.++.|..... ..      ...........+..|..+-..|.|||++.....+...
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~------~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~  393 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK------PTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI  393 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcc-cC------CcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc
Confidence            4668899999999999988777777777755311 00      0001111223377788889999999998887777666


Q ss_pred             CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344           99 KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      ...+-+||||++ ||+.++...  ..++...+..+++|++.||+|||++||.||||||+|++++.+|.+||+|||.+..+
T Consensus       394 ~~~~~~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf  470 (601)
T KOG0590|consen  394 DGILQSMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVF  470 (601)
T ss_pred             ccchhhhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceee
Confidence            666666999998 999987764  34889999999999999999999999999999999999999999999999998876


Q ss_pred             CCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC
Q 014344          179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG  258 (426)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  258 (426)
                      ....                                                    .........++|+..|+|||++.+
T Consensus       471 ~~~~----------------------------------------------------e~~~~~~~g~~gS~pY~apE~~~~  498 (601)
T KOG0590|consen  471 RYPW----------------------------------------------------EKNIHESSGIVGSDPYLAPEVLTG  498 (601)
T ss_pred             ccCc----------------------------------------------------chhhhhhcCcccCCcCcCcccccc
Confidence            4211                                                    011123456789999999999999


Q ss_pred             CCCC-hhhHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhc--------CCCC-CCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          259 KGHD-FAVDWWSLGVVLHEMLYGATPFRGSSRKETF-YRILC--------RPPD-LVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       259 ~~~~-~~~DiwSlG~il~ell~g~~pf~~~~~~~~~-~~i~~--------~~~~-~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ..|+ ..+||||.|+++..|.+|+.||......+.. .....        .+.. ....+...+.+|.+||+.||.+|.|
T Consensus       499 ~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t  578 (601)
T KOG0590|consen  499 KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT  578 (601)
T ss_pred             cccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec
Confidence            9996 6799999999999999999999876544321 11111        1111 1123566789999999999999999


Q ss_pred             hHHHhcCCCcCCCC
Q 014344          328 VEEIKGHEFFKGVN  341 (426)
Q Consensus       328 ~~eil~hp~f~~~~  341 (426)
                      +++|++.+||+.++
T Consensus       579 i~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  579 IEQILNDEWIRSIE  592 (601)
T ss_pred             HHHHhhChHhhhcc
Confidence            99999999998765

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.96  E-value=7.2e-28  Score=232.55  Aligned_cols=254  Identities=24%  Similarity=0.326  Sum_probs=197.2

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCC-ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC----CCccee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESS-ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH----PLLPRL   91 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h----p~iv~l   91 (426)
                      +|++.+.||+|+||.||+|.+..++ ..+|+|+.......             ....+..|..++..+..    ++++.+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~-------------~~~~l~~E~~vl~~l~~~~~~~~~~~~   85 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS-------------KPSVLKIEIQVLKKLEKKNGPSHFPKL   85 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccC-------------CCccchhHHHHHHHHhhhcCCCCCCEE
Confidence            7999999999999999999998775 67999987432111             11146668889988872    699999


Q ss_pred             eeee-ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-----C
Q 014344           92 RGVL-STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-----G  165 (426)
Q Consensus        92 ~~~~-~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-----g  165 (426)
                      ++.+ ..+.+.|+||+.+ |.+|.+++.....+.|+..++..++.|++.+|++||+.|++||||||+|+++...     .
T Consensus        86 ~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~  164 (322)
T KOG1164|consen   86 LDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVR  164 (322)
T ss_pred             EEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccc
Confidence            9999 5888999999988 8999999877766779999999999999999999999999999999999999865     3


Q ss_pred             cEEEecccccccCC--CCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-cc
Q 014344          166 HIMLVDFDLSTKLS--PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK-SN  242 (426)
Q Consensus       166 ~ikL~DFgls~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  242 (426)
                      .+.|.|||+++...  ......                                                 ....+. ..
T Consensus       165 ~~~llDfGlar~~~~~~~~~~~-------------------------------------------------~~~~r~~~~  195 (322)
T KOG1164|consen  165 TLYLLDFGLARRFKYVGDSGGN-------------------------------------------------LRPPRPQKG  195 (322)
T ss_pred             eEEEEecCCCccccccCCCCcc-------------------------------------------------cccCCCCcc
Confidence            69999999999432  111100                                                 000011 23


Q ss_pred             ccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhcCCC---CCCCCCHHHHHHHHH
Q 014344          243 SFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE---TFYRILCRPP---DLVGEPTPLRNLIRR  316 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~---~~~~~~~~~~~li~~  316 (426)
                      .+.||..|+++.+..+...+.+.|+||++.++.+++.|..||.+.....   .+.+......   .....+..+..+...
T Consensus       196 ~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (322)
T KOG1164|consen  196 LFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEY  275 (322)
T ss_pred             CCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHH
Confidence            5679999999999999999999999999999999999999997765322   2222211111   122345677788888


Q ss_pred             HhccCCCCCCChHHHhc
Q 014344          317 LLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~  333 (426)
                      +-..+...+|....+..
T Consensus       276 ~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  276 IDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             hhccCCcCCCCHHHHHH
Confidence            87889999998776654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=1.6e-27  Score=208.35  Aligned_cols=272  Identities=20%  Similarity=0.301  Sum_probs=211.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC-CCc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH-PLL   88 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~i   88 (426)
                      ...+-.++|+++++||+|+||-+|++....+|+.||||+=...               .....+..|.++.+.|.+ ..|
T Consensus         9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~---------------a~hpqL~yEskvY~iL~~g~Gi   73 (341)
T KOG1163|consen    9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK---------------AKHPQLLYESKVYRILQGGVGI   73 (341)
T ss_pred             hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc---------------CCCcchhHHHHHHHHhccCCCC
Confidence            3456678899999999999999999999999999999985322               223456679999999985 799


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC---C
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN---G  165 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~---g  165 (426)
                      +.+..++.+..+-.+||+++ |.+|.++..-.. +.|+-.++..++-|++.-++|+|.+++|||||||+|+|..-+   .
T Consensus        74 P~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~  151 (341)
T KOG1163|consen   74 PHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCN  151 (341)
T ss_pred             chhhhhccccccceeeeecc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccc
Confidence            99999999999999999998 899999876544 459999999999999999999999999999999999999743   4


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+.|+|||+|+.+....+...                                                 ...+......
T Consensus       152 kl~LIDFGLaKky~d~~t~~H-------------------------------------------------Ipyre~r~lt  182 (341)
T KOG1163|consen  152 KLYLIDFGLAKKYRDIRTRQH-------------------------------------------------IPYREDRNLT  182 (341)
T ss_pred             eEEEEeccchhhhcccccccc-------------------------------------------------CccccCCccc
Confidence            689999999998754221100                                                 0122344567


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCC------CCCCCCHHHHHHHHH
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPP------DLVGEPTPLRNLIRR  316 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~------~~~~~~~~~~~li~~  316 (426)
                      ||..|.+-....|...+.+.|+=|+|.+|..+.-|..||.+...   .+.+.+|.....      -+.+.|.++.-.|.-
T Consensus       183 GTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y  262 (341)
T KOG1163|consen  183 GTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNY  262 (341)
T ss_pred             eeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHH
Confidence            99999998888888888999999999999999999999998654   333445542221      234678888888888


Q ss_pred             HhccCCCCCCChH---HH-------hcCCCcCCCChhhhhh
Q 014344          317 LLEKDPTKRIGVE---EI-------KGHEFFKGVNWELLLK  347 (426)
Q Consensus       317 ~L~~dP~~R~s~~---ei-------l~hp~f~~~~~~~~~~  347 (426)
                      |-..--++-|...   ++       |+|.+=--.||..+.+
T Consensus       263 ~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkq  303 (341)
T KOG1163|consen  263 CRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQ  303 (341)
T ss_pred             HhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHH
Confidence            8777777777633   22       2333222258988764

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.95  E-value=3.3e-26  Score=218.58  Aligned_cols=259  Identities=32%  Similarity=0.543  Sum_probs=205.9

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC-Ccceeeeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP-LLPRLRGVLS   96 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~iv~l~~~~~   96 (426)
                      |.+.+.||.|+||.||++.+.   ..+|+|++........          .....+.+|+.++..+.|+ +++++.+.+.
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~----------~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~   68 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKS----------KEVERFLREIQILASLNHPPNIVKLYDFFQ   68 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccch----------hHHHHHHHHHHHHHHccCCcceeeEEEEEe
Confidence            789999999999999999987   7899999865432211          2456788899999999988 7999999998


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-cEEEecccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSE-QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-HIMLVDFDL  174 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~-~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-~ikL~DFgl  174 (426)
                      .....+++++|+.++++..++..... ..++...+..++.|++.++.|+|+.|++||||||+||+++..+ .++++|||+
T Consensus        69 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~  148 (384)
T COG0515          69 DEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGL  148 (384)
T ss_pred             cCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCc
Confidence            88889999999999999976654331 2589999999999999999999999999999999999999988 799999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +..+.........                                                  .......+||+.|+|||
T Consensus       149 ~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~t~~~~~pe  178 (384)
T COG0515         149 AKLLPDPGSTSSI--------------------------------------------------PALPSTSVGTPGYMAPE  178 (384)
T ss_pred             ceecCCCCccccc--------------------------------------------------cccccccccccccCCHH
Confidence            8754322100000                                                  01235567999999999


Q ss_pred             hhcC---CCCChhhHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCC--C--CCCC------HHHHHHHHHH
Q 014344          255 IIEG---KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPD--L--VGEP------TPLRNLIRRL  317 (426)
Q Consensus       255 ~~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~~--~--~~~~------~~~~~li~~~  317 (426)
                      .+.+   ..+....|+||+|++++++++|..||.....    ......+......  .  ....      ..+.+++.++
T Consensus       179 ~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (384)
T COG0515         179 VLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKL  258 (384)
T ss_pred             HhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHH
Confidence            9988   5788999999999999999999999887763    3333333322211  1  1111      4688999999


Q ss_pred             hccCCCCCCChHHHhcCCCcCC
Q 014344          318 LEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       318 L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      +..+|..|.+..+...++|...
T Consensus       259 ~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         259 LAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             HhcCchhcCCHHHHhhchHhhC
Confidence            9999999999999888866643

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.95  E-value=4.3e-27  Score=227.32  Aligned_cols=147  Identities=19%  Similarity=0.130  Sum_probs=116.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcC-CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce-
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVE-SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR-   90 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~-   90 (426)
                      .-.++|++.+.||+|+||+||+|++.. +++.+|||++......        .........+.+|+++|+.++|+|++. 
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~--------~~~~~~~~~~~~E~~iL~~L~h~~iv~~   86 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPW--------WSKPLARHLAAREIRALKTVRGIGVVPQ   86 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccc--------cccHHHHHHHHHHHHHHHhccCCCCCcE
Confidence            345679999999999999999999876 6788899987422100        001123456889999999999999985 


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCCeeeccCCcEEE
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDL-KPENIMIQENGHIML  169 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDl-Kp~NiLl~~~g~ikL  169 (426)
                      +++.    ...|+|||||+|++|... .  .   ..   ...++.|++.||.|||++||+|||| ||+|||++.++.+||
T Consensus        87 l~~~----~~~~LVmE~~~G~~L~~~-~--~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikL  153 (365)
T PRK09188         87 LLAT----GKDGLVRGWTEGVPLHLA-R--P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAV  153 (365)
T ss_pred             EEEc----CCcEEEEEccCCCCHHHh-C--c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEE
Confidence            4432    457999999999999632 1  1   11   1467889999999999999999999 999999999999999


Q ss_pred             ecccccccCCC
Q 014344          170 VDFDLSTKLSP  180 (426)
Q Consensus       170 ~DFgls~~~~~  180 (426)
                      +|||+|+.+..
T Consensus       154 iDFGlA~~~~~  164 (365)
T PRK09188        154 IDFQLASVFRR  164 (365)
T ss_pred             EECccceeccc
Confidence            99999987753

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=3e-26  Score=208.92  Aligned_cols=247  Identities=24%  Similarity=0.347  Sum_probs=193.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~   93 (426)
                      .-.|+|+++||.|+||+.+++...-++++||||.=.+..               ....+.-|.+..+.|. .++|+.++.
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS---------------~APQLrdEYr~YKlL~g~~GIP~vYY   91 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS---------------EAPQLRDEYRTYKLLGGTEGIPQVYY   91 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccccC---------------CcchHHHHHHHHHHHcCCCCCCceee
Confidence            347999999999999999999999999999999742211               1234556888888886 699999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-----cEE
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-----HIM  168 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-----~ik  168 (426)
                      +.+...+-.||||++ |-+|.++..-.++ .|+..++..++.|++.-++|+|++.+|+|||||+|+||...+     .|-
T Consensus        92 FGqeG~~NiLVidLL-GPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~Ih  169 (449)
T KOG1165|consen   92 FGQEGKYNILVIDLL-GPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIH  169 (449)
T ss_pred             eccccchhhhhhhhh-CcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEE
Confidence            999999999999998 8999999877654 599999999999999999999999999999999999998654     589


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+|+.+....+...                                                 ...+...+..||.
T Consensus       170 iiDFGmAK~YrDp~TkqH-------------------------------------------------IPYrE~KSLsGTA  200 (449)
T KOG1165|consen  170 IIDFGMAKEYRDPKTKQH-------------------------------------------------IPYREHKSLSGTA  200 (449)
T ss_pred             EEeccchhhhcCcccccc-------------------------------------------------Cccccccccccce
Confidence            999999998754221100                                                 0112334566999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHhcCCC------CCCCCCHHHHHHHHHHhc
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCRPP------DLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~---~~~~~~~~i~~~~~------~~~~~~~~~~~li~~~L~  319 (426)
                      +||+-.-..|...+.+.|+=|||-++...|-|..||.+.   +.++.+.+|-....      -+.+.|.++...|+-.-.
T Consensus       201 RYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~  280 (449)
T KOG1165|consen  201 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRR  280 (449)
T ss_pred             eeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999875   55666776632211      122445555555555544


Q ss_pred             cCCCCCCC
Q 014344          320 KDPTKRIG  327 (426)
Q Consensus       320 ~dP~~R~s  327 (426)
                      .+-.+-|.
T Consensus       281 L~F~E~PD  288 (449)
T KOG1165|consen  281 LDFFETPD  288 (449)
T ss_pred             cCcccCCC
Confidence            45555554

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.92  E-value=2.5e-25  Score=200.56  Aligned_cols=146  Identities=18%  Similarity=0.178  Sum_probs=112.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||.|+||.||++.+  +++.+|||++............    ....-..+.+|++.+.++.||+|+.+.+++
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~----~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~  104 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLK----SFVKGDYYENLIVQTDRVRSEGLASLNDFY  104 (232)
T ss_pred             CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHH----hhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence            4599999999999999999765  4678999999654322110000    000012267899999999999999999886


Q ss_pred             ecC--------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           96 STD--------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        96 ~~~--------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ...        ...++||||++|.+|.++..      +++.    ...+++.+|..||+.|++|||+||+||+++.+| +
T Consensus       105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i  173 (232)
T PRK10359        105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-L  173 (232)
T ss_pred             eecccccccccCCeEEEEEEECCccHHHhhh------ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-E
Confidence            543        35889999999999987632      3332    356999999999999999999999999999999 9


Q ss_pred             EEecccccccC
Q 014344          168 MLVDFDLSTKL  178 (426)
Q Consensus       168 kL~DFgls~~~  178 (426)
                      +|+|||.+...
T Consensus       174 ~liDfg~~~~~  184 (232)
T PRK10359        174 RIIDLSGKRCT  184 (232)
T ss_pred             EEEECCCcccc
Confidence            99999987654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.92  E-value=1.5e-24  Score=201.29  Aligned_cols=236  Identities=25%  Similarity=0.349  Sum_probs=147.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC----------CC
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE----------HP   86 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~----------hp   86 (426)
                      .+.....||.|+++.||.|+|..|++.+|+|+......          .....++.+.+|.-....+.          |-
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~----------~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~   82 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPAD----------ASANEYEQLKEEQLAITLFPGVKNPKEAYRHL   82 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESST----------THTTHHHHHHHHHHGGGGSTT--SHHHHHHHH
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccc----------cchHHHHHHHHHHHHhhhhccCCCHHHHHHhc
Confidence            36788999999999999999999999999999854331          11123444444443332221          11


Q ss_pred             Ccceeeeee---------ecC---C-----eEEEEEeccCCCChHHHHHH---hccC--CCCHHHHHHHHHHHHHHHHHH
Q 014344           87 LLPRLRGVL---------STD---K-----FVGYAIDYCPGRDLHSLRKQ---QSEQ--MFSDDTIRFYAAELVLALEYL  144 (426)
Q Consensus        87 ~iv~l~~~~---------~~~---~-----~~~lV~Ey~~gg~L~~l~~~---~~~~--~l~~~~~~~~~~qil~aL~~L  144 (426)
                      .++..++..         ...   .     +.+++|+-+. +||.+++..   ....  .+.......+..|++..+++|
T Consensus        83 r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~L  161 (288)
T PF14531_consen   83 RFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANL  161 (288)
T ss_dssp             -B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence            222222221         111   1     2367788774 888887542   2111  122233344568999999999


Q ss_pred             HHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCC
Q 014344          145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPR  224 (426)
Q Consensus       145 H~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (426)
                      |..|++|+||||+|++++.+|.++|+||+.........                                          
T Consensus       162 h~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~------------------------------------------  199 (288)
T PF14531_consen  162 HSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY------------------------------------------  199 (288)
T ss_dssp             HHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE------------------------------------------
T ss_pred             hhcceEecccceeeEEEcCCCCEEEcChHHHeecCcee------------------------------------------
Confidence            99999999999999999999999999998776543110                                          


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCCccchhhcCC--------CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 014344          225 IGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK--------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI  296 (426)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i  296 (426)
                                       .....+..|.+||.....        .++++.|.|+||+++|.|++|+.||........... 
T Consensus       200 -----------------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-  261 (288)
T PF14531_consen  200 -----------------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-  261 (288)
T ss_dssp             -----------------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-
T ss_pred             -----------------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-
Confidence                             001245668999987542        468999999999999999999999986654322111 


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          297 LCRPPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       297 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                        ....+.+.|..+++||++||++||.+|
T Consensus       262 --~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 --DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             --GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             --cchhcCCcCHHHHHHHHHHccCCcccC
Confidence              122344668999999999999999988

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.92  E-value=7.6e-25  Score=194.80  Aligned_cols=152  Identities=15%  Similarity=0.228  Sum_probs=112.2

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhh-hcc----------cCCCch--hhHHHHHHHHHHHhcCCCC
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-ELT----------NNDNGD--KYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~-~~~----------~~~~~~--~~~~~~~E~~il~~l~hp~   87 (426)
                      ...||+|++|.||+|.+. +|+.||||++.......... ...          ......  .......|+.+|..+.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999986 89999999997653221110 000          000000  0123456999999998887


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH-HHCCCcccCCCCCCeeeccCCc
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYL-HNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~L-H~~giiHrDlKp~NiLl~~~g~  166 (426)
                      +........ .. .++||||++|+++......  ...++...+..++.|++.+|.+| |+.||+||||||+|||++ ++.
T Consensus        81 v~~p~~~~~-~~-~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~  155 (190)
T cd05147          81 IPCPEPILL-KS-HVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK  155 (190)
T ss_pred             CCCCcEEEe-cC-CEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence            754333222 22 3899999998877654322  24589999999999999999999 799999999999999998 588


Q ss_pred             EEEecccccccC
Q 014344          167 IMLVDFDLSTKL  178 (426)
Q Consensus       167 ikL~DFgls~~~  178 (426)
                      ++|+|||+|...
T Consensus       156 v~LiDFG~a~~~  167 (190)
T cd05147         156 LYIIDVSQSVEH  167 (190)
T ss_pred             EEEEEccccccC
Confidence            999999999764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=5.6e-25  Score=204.91  Aligned_cols=269  Identities=20%  Similarity=0.290  Sum_probs=181.2

Q ss_pred             CCCCCCCCCCCcEEEeeecccCceEEEEEEEcCCC-----------------------------------ceEEEEEeeh
Q 014344            7 DRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESS-----------------------------------ESFALKVIWR   51 (426)
Q Consensus         7 ~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~-----------------------------------~~vAiK~~~~   51 (426)
                      ++.-..+.+++|+|+.-||+|....||.|+-...|                                   -+.|||.|..
T Consensus       148 ~r~dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN  227 (598)
T KOG4158|consen  148 NRIDSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFN  227 (598)
T ss_pred             chhhcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcc
Confidence            34455678899999999999999999999754311                                   1256676632


Q ss_pred             hhHHhhhhhcccCCCchhhHHHHHH------------H-----HHHH-----hcCCCCcceeeeeeec------------
Q 014344           52 DLIEKKSKELTNNDNGDKYRRISFE------------Q-----RVLR-----NVEHPLLPRLRGVLST------------   97 (426)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~E------------~-----~il~-----~l~hp~iv~l~~~~~~------------   97 (426)
                      -.....        ....++...+|            .     +.+.     ..+|||||+++.+|.+            
T Consensus       228 ~~~~s~--------~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~Y  299 (598)
T KOG4158|consen  228 FEHDSG--------DAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERY  299 (598)
T ss_pred             cccCCc--------hHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhC
Confidence            111100        00011111111            0     0111     1369999999998844            


Q ss_pred             ---------------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec
Q 014344           98 ---------------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ  162 (426)
Q Consensus        98 ---------------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~  162 (426)
                                     ...+|+||.-+. .+|..|+-.+.   .+....+.++.|+++|+.|||++||.|||+|.+|||+.
T Consensus       300 Pdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~E  375 (598)
T KOG4158|consen  300 PDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLE  375 (598)
T ss_pred             cccccceecccccCCCceEEEehhcch-hhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEE
Confidence                           346899999885 78888876543   67788889999999999999999999999999999995


Q ss_pred             --cCC--cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          163 --ENG--HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS  238 (426)
Q Consensus       163 --~~g--~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (426)
                        .|+  .+.|+|||.|-......                  .+..+.+.                              
T Consensus       376 lddD~~P~LVvaDFGCcLAd~~hG------------------lqlpy~S~------------------------------  407 (598)
T KOG4158|consen  376 LDDDEIPQLVVADFGCCLADDNHG------------------LQLPYESD------------------------------  407 (598)
T ss_pred             ecCCCCcEEEEcccceeeeccccc------------------cccccccc------------------------------
Confidence              333  58999999875432111                  00000000                              


Q ss_pred             CCccccccCCCCccchhhcCCCC------ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHhcCCCCCCCCCHH
Q 014344          239 EKSNSFVGTEEYVAPEIIEGKGH------DFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRPPDLVGEPTP  309 (426)
Q Consensus       239 ~~~~~~~gt~~y~aPE~~~~~~~------~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~  309 (426)
                        .-..-|.-..||||+....+-      -.++|.|+.|.+.||++...-||.+......-   ++--..|+....+++.
T Consensus       408 --~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~  485 (598)
T KOG4158|consen  408 --EVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPV  485 (598)
T ss_pred             --cccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChH
Confidence              011126777899999865331      14899999999999999999999875432211   2222345555567899


Q ss_pred             HHHHHHHHhccCCCCCCCh---HHHhcCCCc
Q 014344          310 LRNLIRRLLEKDPTKRIGV---EEIKGHEFF  337 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~---~eil~hp~f  337 (426)
                      +++++..+|+.||++|+++   ..+|+--.|
T Consensus       486 ~rqlV~~lL~r~pskRvsp~iAANvl~LsLw  516 (598)
T KOG4158|consen  486 ARQLVFDLLKRDPSKRVSPNIAANVLNLSLW  516 (598)
T ss_pred             HHHHHHHHhcCCccccCCccHHHhHHHHHHh
Confidence            9999999999999999994   455544333

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.91  E-value=5.8e-25  Score=226.53  Aligned_cols=245  Identities=24%  Similarity=0.264  Sum_probs=179.1

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|...+.||++.|=+|.+|++.. | .|+|||+-+....-         .-..+.+-..|++ ...+++||++.+.-+..
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~---------sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~   91 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTI---------SLRPFKQRLEEIK-FALMKAPNCLPFQKVLV   91 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCC---------CchHHHHHHHHHH-HHhhcCCcccchHHHHH
Confidence            68899999999999999999754 3 59999996543110         1112333334555 66678999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      +++..|||-+|.. .+|++-+..+  ..+..-+.+.|+.||+.||..+|..||+|||||.|||||++-..+.|+||..-+
T Consensus        92 t~kAAylvRqyvk-hnLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFK  168 (1431)
T KOG1240|consen   92 TDKAAYLVRQYVK-HNLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFK  168 (1431)
T ss_pred             hhHHHHHHHHHHh-hhhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccC
Confidence            9999999999995 7888866543  337888899999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ...-..          .++              ++.+..                         ..+...-.+|.|||.+
T Consensus       169 PtYLPe----------DNP--------------adf~fF-------------------------FDTSrRRtCYiAPERF  199 (1431)
T KOG1240|consen  169 PTYLPE----------DNP--------------ADFTFF-------------------------FDTSRRRTCYIAPERF  199 (1431)
T ss_pred             CccCCC----------CCc--------------ccceEE-------------------------EecCCceeeecChHhh
Confidence            332110          000              000000                         0011123469999987


Q ss_pred             cCCC-----------CChhhHHHHHHHHHHHHHh-CCCCCCCC-----------CHHHHHHHHhcCCCCCCCCCHHHHHH
Q 014344          257 EGKG-----------HDFAVDWWSLGVVLHEMLY-GATPFRGS-----------SRKETFYRILCRPPDLVGEPTPLRNL  313 (426)
Q Consensus       257 ~~~~-----------~~~~~DiwSlG~il~ell~-g~~pf~~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~l  313 (426)
                      ....           .+.+.||||+||+++||++ |++||.-.           +....+.+|         ....+++|
T Consensus       200 v~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~I---------ed~~~Rnl  270 (1431)
T KOG1240|consen  200 VSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEKI---------EDVSLRNL  270 (1431)
T ss_pred             hccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHhC---------cCccHHHH
Confidence            5422           4678999999999999986 89999421           111111111         13468999


Q ss_pred             HHHHhccCCCCCCChHHHhcC
Q 014344          314 IRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~h  334 (426)
                      |..|++.||++|.+|++.|+.
T Consensus       271 il~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  271 ILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHccCchhccCHHHHHHh
Confidence            999999999999999999975

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.91  E-value=7.2e-24  Score=188.98  Aligned_cols=155  Identities=16%  Similarity=0.227  Sum_probs=114.7

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhh-hhc-c------c---CCCc--hhhHHHHHHHHHHHhcCCC
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS-KEL-T------N---NDNG--DKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~-~~~-~------~---~~~~--~~~~~~~~E~~il~~l~hp   86 (426)
                      |+..||+|++|.||+|.+. +|+.||||++......... ... .      .   ..+.  ........|...+.++.|+
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            4578999999999999987 8999999999765321100 000 0      0   0000  0122346799999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCC
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g  165 (426)
                      ++.....+....  .|+||||++|+++......  ...++...+..++.|++.+|.+||+ .||+||||||+|||++ ++
T Consensus        80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~  154 (190)
T cd05145          80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG  154 (190)
T ss_pred             CCCCceEEEecC--CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence            885544443332  4899999998865433222  2347889999999999999999999 9999999999999998 89


Q ss_pred             cEEEecccccccCCC
Q 014344          166 HIMLVDFDLSTKLSP  180 (426)
Q Consensus       166 ~ikL~DFgls~~~~~  180 (426)
                      .++|+|||++..+..
T Consensus       155 ~~~liDFG~a~~~~~  169 (190)
T cd05145         155 KPYIIDVSQAVELDH  169 (190)
T ss_pred             CEEEEEcccceecCC
Confidence            999999999987653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=1.2e-22  Score=179.46  Aligned_cols=204  Identities=18%  Similarity=0.204  Sum_probs=141.4

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLS   96 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~   96 (426)
                      ..+...|++|+||+|+++..  .+..++.+.+.....-.         .......+.+|+++|++|. |++++.++++  
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~---------~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--   70 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWL---------RGVAWWLARREALALRQLDGLPRTPRLLHW--   70 (218)
T ss_pred             cccceeecCCCcceEEEeec--CCceeeecccccchhhh---------hhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--
Confidence            34678999999999998875  67777777663221100         0012236788999999996 5889999886  


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCCeeeccCCcEEEeccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDL-KPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDl-Kp~NiLl~~~g~ikL~DFgls  175 (426)
                        ...|++|||+.|.+|.....        .. ...++.|++.+|+++|++||+|||| ||+|||++.+|.++|+|||++
T Consensus        71 --~~~~lvmeyI~G~~L~~~~~--------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A  139 (218)
T PRK12274         71 --DGRHLDRSYLAGAAMYQRPP--------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLA  139 (218)
T ss_pred             --cCEEEEEeeecCccHHhhhh--------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCc
Confidence              34699999999999864321        11 1346789999999999999999999 799999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..........   ..+.   ...+.....                                    . ....++.|++|+.
T Consensus       140 ~~~~~~~~~~---r~L~---~rDl~~llk------------------------------------~-~~~y~~~~l~~~~  176 (218)
T PRK12274        140 VRGNPRARWM---RLLA---REDLRHLLK------------------------------------H-KRMYCPAALTPVE  176 (218)
T ss_pred             eecCCcchHH---HHHH---HHHHHHHHH------------------------------------H-HHhcCCCCCCHHH
Confidence            8554221000   0000   000000000                                    0 1125778899986


Q ss_pred             hcCC-CCC-hhhHHHHHHHHHHHHHhCCCCCCCCC
Q 014344          256 IEGK-GHD-FAVDWWSLGVVLHEMLYGATPFRGSS  288 (426)
Q Consensus       256 ~~~~-~~~-~~~DiwSlG~il~ell~g~~pf~~~~  288 (426)
                      .... ..+ .+.++++.|+-+|.++|++.|+-+.+
T Consensus       177 ~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        177 RRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            5432 233 57899999999999999998875443

>PRK10345 hypothetical protein; Provisional

Probab=99.88  E-value=3e-22  Score=179.96  Aligned_cols=137  Identities=23%  Similarity=0.330  Sum_probs=107.1

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-----CCCCcceeeeee
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-----EHPLLPRLRGVL   95 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~iv~l~~~~   95 (426)
                      .+.||+|+||.||.  ++.++.. +||++.....             ...+.+.+|+.+++.+     +||||+++++++
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~-------------~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~   70 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD-------------GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTV   70 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEecccc-------------chHHHHHHHHHHHHHhhccCCCCcccceeeEEE
Confidence            46799999999995  6666665 6998844211             1235688899999999     679999999999


Q ss_pred             ecCC---eEE-EEEec--cCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHH-HHHHHCCCcccCCCCCCeeecc----C
Q 014344           96 STDK---FVG-YAIDY--CPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLAL-EYLHNMGIVYRDLKPENIMIQE----N  164 (426)
Q Consensus        96 ~~~~---~~~-lV~Ey--~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL-~~LH~~giiHrDlKp~NiLl~~----~  164 (426)
                      +++.   .++ +||||  +.+++|.+++++.   .+++.  ..++.|++.++ +|||+++|+||||||+|||++.    +
T Consensus        71 et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~  145 (210)
T PRK10345         71 ETDCGTGYVYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESE  145 (210)
T ss_pred             EeCCCCeEEEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCC
Confidence            8874   434 78999  5579999998652   26666  35678888888 9999999999999999999974    3


Q ss_pred             CcEEEecccccccC
Q 014344          165 GHIMLVDFDLSTKL  178 (426)
Q Consensus       165 g~ikL~DFgls~~~  178 (426)
                      +.++|+||+-+..+
T Consensus       146 ~~~~LiDg~G~~~~  159 (210)
T PRK10345        146 VIPVVCDNIGESTF  159 (210)
T ss_pred             CcEEEEECCCCcce
Confidence            47999994444443

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.8e-22  Score=179.67  Aligned_cols=247  Identities=20%  Similarity=0.284  Sum_probs=196.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+++++..++.+|...-.|..|+++..  |.-++.|++.-.....           ...+.|..|.--|+.+.||||+
T Consensus       184 ~~gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~-----------risrdfneefp~lrifshpnil  250 (448)
T KOG0195|consen  184 YTGIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTA-----------RISRDFNEEFPALRIFSHPNIL  250 (448)
T ss_pred             ccCcchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcch-----------hhcchhhhhCcceeeecCCchh
Confidence            44577788889999999999999999864  4456677764332211           2345677788889999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCCCCeeeccCCcE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYR-DLKPENIMIQENGHI  167 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHr-DlKp~NiLl~~~g~i  167 (426)
                      .+++.+..+..+.++..||+-|+|+.+++.+..-..+..++.+++.+|+.|+.|||+. .++-| -|....+++|++-+.
T Consensus       251 pvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlta  330 (448)
T KOG0195|consen  251 PVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTA  330 (448)
T ss_pred             hhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhh
Confidence            9999999999999999999999999999988777788899999999999999999997 34443 588889999988654


Q ss_pred             EE--ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          168 ML--VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       168 kL--~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      +|  +|--++-+..                                                               ...
T Consensus       331 rismad~kfsfqe~---------------------------------------------------------------gr~  347 (448)
T KOG0195|consen  331 RISMADTKFSFQEV---------------------------------------------------------------GRA  347 (448)
T ss_pred             heecccceeeeecc---------------------------------------------------------------ccc
Confidence            44  4433222110                                                               011


Q ss_pred             cCCCCccchhhcCCCCC---hhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHhc
Q 014344          246 GTEEYVAPEIIEGKGHD---FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~---~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~li~~~L~  319 (426)
                      =.|.||+||.++..+-+   .++|+|||++++|||.|...||...++.+.-.+|.-   +...+++.+.....|+.-|+.
T Consensus       348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmn  427 (448)
T KOG0195|consen  348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMN  427 (448)
T ss_pred             cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhc
Confidence            35789999999887654   589999999999999999999999999988777742   233456778889999999999


Q ss_pred             cCCCCCCChHHHh
Q 014344          320 KDPTKRIGVEEIK  332 (426)
Q Consensus       320 ~dP~~R~s~~eil  332 (426)
                      .||.+||.++.|+
T Consensus       428 edpgkrpkfdmiv  440 (448)
T KOG0195|consen  428 EDPGKRPKFDMIV  440 (448)
T ss_pred             CCCCcCCCcceeh
Confidence            9999999988764

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=1.1e-21  Score=205.94  Aligned_cols=198  Identities=21%  Similarity=0.364  Sum_probs=158.5

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC---CCCc
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE---HPLL   88 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~i   88 (426)
                      ++....|.|-+.||.|+||+||+|.+.. |+.||||+=....                ..++.--.+++.+|+   -+.|
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~----------------~WEfYI~~q~~~RLk~~~~~~~  756 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPN----------------PWEFYICLQVMERLKPQMLPSI  756 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCC----------------ceeeeehHHHHHhhchhhhcch
Confidence            4556789999999999999999999866 9999999853221                112222233455554   2456


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-----
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-----  163 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-----  163 (426)
                      ..+..++.-.+.-++|+||.+.|+|.+++.  ..+.+++..+.+++.|++..++.||..+|||+||||+|+||..     
T Consensus       757 ~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~  834 (974)
T KOG1166|consen  757 MHISSAHVFQNASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICAD  834 (974)
T ss_pred             HHHHHHHccCCcceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCC
Confidence            666666666777889999999999999987  4566999999999999999999999999999999999999963     


Q ss_pred             --CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          164 --NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       164 --~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                        .--++|+|||-+..+....                                                      ...+.
T Consensus       835 ~~~~~l~lIDfG~siDm~lfp------------------------------------------------------~~~~F  860 (974)
T KOG1166|consen  835 SDSKGLYLIDFGRSIDMKLFP------------------------------------------------------DGTKF  860 (974)
T ss_pred             CcccceEEEecccceeeeEcC------------------------------------------------------CCcEE
Confidence              2359999999987664221                                                      11245


Q ss_pred             cccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCC
Q 014344          242 NSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGAT  282 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~  282 (426)
                      ...++|-.+-.+|+..|.++++.+|.|.|+.+++-||.|++
T Consensus       861 ~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  861 KAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             eeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            55678888999999999999999999999999999999964

>smart00090 RIO RIO-like kinase

Probab=99.86  E-value=2.1e-21  Score=178.50  Aligned_cols=156  Identities=17%  Similarity=0.188  Sum_probs=116.0

Q ss_pred             CcEEEeeecccCceEEEEEE-EcCCCceEEEEEeehhhHHhhhhh--c--c-----cCCCc--hhhHHHHHHHHHHHhcC
Q 014344           17 CLRIVSALGRGAKGVVFLVK-DVESSESFALKVIWRDLIEKKSKE--L--T-----NNDNG--DKYRRISFEQRVLRNVE   84 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~-~~~~~~~vAiK~~~~~~~~~~~~~--~--~-----~~~~~--~~~~~~~~E~~il~~l~   84 (426)
                      -|++.+.||+|++|.||+|. +..+|+.||||++...........  .  .     .....  .....+..|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999999 678999999999975432111000  0  0     00000  01234678999999997


Q ss_pred             CC--CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCCeee
Q 014344           85 HP--LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG-IVYRDLKPENIMI  161 (426)
Q Consensus        85 hp--~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g-iiHrDlKp~NiLl  161 (426)
                      +.  .++++++.   . ..++||||+.|.+|..+...  ...+....+..++.||+.+|.+||+.| |+||||||+||++
T Consensus       109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli  182 (237)
T smart00090      109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV  182 (237)
T ss_pred             hcCCCCCeeeEe---c-CceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence            53  34455442   2 34899999999888765322  233667778899999999999999999 9999999999999


Q ss_pred             ccCCcEEEecccccccCC
Q 014344          162 QENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       162 ~~~g~ikL~DFgls~~~~  179 (426)
                      + ++.++|+|||++....
T Consensus       183 ~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      183 H-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             E-CCCEEEEEChhhhccC
Confidence            9 8899999999988654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.86  E-value=3.4e-22  Score=206.09  Aligned_cols=295  Identities=30%  Similarity=0.444  Sum_probs=222.1

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ..+.+.+.+-+-+|+++.++.+.-..+|...++|+..+......          ..++.+..+-.++-...+|.++....
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~----------~~~~s~r~~s~~~i~p~~P~v~~~~~  871 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRT----------NDYESIRSKSNILITPRSPAVVRSFP  871 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhcc----------ccccccCCccCccccCCCCceecccC
Confidence            56778899999999999999999888888888887644322111          12233333444444445677777766


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      .|......+++++|+.|++|.+.++...  ..+.+.++.++..+..+++|||...+.|||++|.|+|...+|+.+++|||
T Consensus       872 s~~~rsP~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~  949 (1205)
T KOG0606|consen  872 SFPCRSPLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFG  949 (1205)
T ss_pred             CCCCCCCcchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccc
Confidence            6667788999999999999999877654  47888999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCC-CCCCCCCCC-CCCCCCCccccccCCCCc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPR-IGPDPPSRS-DSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~gt~~y~  251 (426)
                      .......-.+.....+.                    .+-       ..++ ......... .....++....+||+.|.
T Consensus       950 t~~~vg~~~p~~~~sg~--------------------~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~l 1002 (1205)
T KOG0606|consen  950 TLSKVGLIPPTTDLSGP--------------------SSS-------GTPRRLSRSERRPQLSADEARRKHAVVGTPDYL 1002 (1205)
T ss_pred             cccccccccCcCCcccc--------------------ccc-------CccccccccccccccccchhhccccccCCCccc
Confidence            65544321111110000                    000       0000 000000000 011224456778999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCHHHHHHHHHHhccCCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV----GEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      |||...+..++..+|||++|++++|.++|.+||........+..|+.....++    ..++...+++.++|..+|.+|..
T Consensus      1003 aPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~ 1082 (1205)
T KOG0606|consen 1003 APEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLG 1082 (1205)
T ss_pred             CCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccC
Confidence            99999999999999999999999999999999999999999999886654444    33677899999999999999999


Q ss_pred             hH---HHhcCCCcCCCChhhhhh
Q 014344          328 VE---EIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       328 ~~---eil~hp~f~~~~~~~~~~  347 (426)
                      +.   ++..||||++++|+.+..
T Consensus      1083 a~~~~e~k~~~~~~~~~~~~l~~ 1105 (1205)
T KOG0606|consen 1083 AKGAAEVKGHPFFQDVDWENLAL 1105 (1205)
T ss_pred             cccccccccCCccCCCCcccccc
Confidence            87   999999999999999843

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=2.6e-22  Score=206.33  Aligned_cols=261  Identities=26%  Similarity=0.396  Sum_probs=206.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcC-CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVE-SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLR   92 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~   92 (426)
                      ...|++.+.||+|+|+.|-++.... +...+|.|.+....           ........+..|..+-+.+. |+|++.++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-----------~~~~~~~~i~~e~~~~~~~s~h~n~~~~~   87 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-----------KSEDSSEHIDTETDIQKKLSKHSNTVHMI   87 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-----------CccchhhhcCccccccccccccccccccC
Confidence            5679999999999999999887643 34457777664322           12233445566777777787 99999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCCeeeccCC-cEEEe
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH-NMGIVYRDLKPENIMIQENG-HIMLV  170 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH-~~giiHrDlKp~NiLl~~~g-~ikL~  170 (426)
                      +.....+..+++++|..|+++++-+........+...+.+++.|+..+|.|+| ..++.||||||+|.+++..+ .++++
T Consensus        88 ~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~  167 (601)
T KOG0590|consen   88 EPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIA  167 (601)
T ss_pred             CccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCC
Confidence            99999999999999999999998763222224788889999999999999999 99999999999999999999 99999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc-CCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG-TEE  249 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~  249 (426)
                      |||+|..+....                                                     .........+| ++.
T Consensus       168 df~~At~~~~~~-----------------------------------------------------g~~~~~~~~~g~s~~  194 (601)
T KOG0590|consen  168 DFGLATAYRNKN-----------------------------------------------------GAERSLKDRCGSSPP  194 (601)
T ss_pred             CchhhccccccC-----------------------------------------------------CcceeeecccCCCCC
Confidence            999998875411                                                     11223445568 999


Q ss_pred             CccchhhcCCC-CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cC-----CCCCCCCCHHHHHHHHHHhccCC
Q 014344          250 YVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CR-----PPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       250 y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~-~~-----~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      |+|||...+.. .....|+||+|+++..+++|..||.........+.-. ..     ...+...+....+++.++|..+|
T Consensus       195 y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~  274 (601)
T KOG0590|consen  195 YGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENP  274 (601)
T ss_pred             CCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCc
Confidence            99999998854 4688999999999999999999998776554322111 11     22233456778899999999999


Q ss_pred             CCCCChHHHhcCCCcCC
Q 014344          323 TKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~  339 (426)
                      ..|.+.+++..+||+..
T Consensus       275 ~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  275 SNRLSIEELKLDNWLSS  291 (601)
T ss_pred             hhccccccccccccccc
Confidence            99999999999999986

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=7.8e-20  Score=165.68  Aligned_cols=144  Identities=19%  Similarity=0.216  Sum_probs=115.0

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCe
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~  100 (426)
                      ++.||+|++|.||+|..  .+..+++|+...........     .......++.+|+.++..+.|++++....++.....
T Consensus         1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~   73 (211)
T PRK14879          1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPEL-----DERIRRERTRREARIMSRARKAGVNVPAVYFVDPEN   73 (211)
T ss_pred             CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHH-----HHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCC
Confidence            36799999999999986  67889999864321110000     000123467789999999999998877777777788


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      .+++|||++|++|.+++....     . ....++.+++.+|.+||+.|++|||++|.|||++ ++.++|+|||++...
T Consensus        74 ~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879         74 FIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             CEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence            899999999999999875421     2 7788899999999999999999999999999999 889999999998764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.83  E-value=2.3e-21  Score=187.74  Aligned_cols=186  Identities=25%  Similarity=0.401  Sum_probs=139.0

Q ss_pred             CCeEEEEEeccCCCChHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQ-SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~-~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ..++||.|++|.-.+|.+++.+. .....+......++.|+..|++|   +|.+|||+||.||++..+..+||.|||+..
T Consensus       328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~t  404 (516)
T KOG1033|consen  328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT  404 (516)
T ss_pred             ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhhee
Confidence            34689999999999999998743 33346778888999999999999   999999999999999999999999999988


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......+..                                                  ....+.+..+||..||+||.+
T Consensus       405 s~~~~~~~~--------------------------------------------------~~~a~~t~~~gt~~YmsPEQi  434 (516)
T KOG1033|consen  405 SQDKDETVA--------------------------------------------------PAAASHTQQVGTLLYMSPEQI  434 (516)
T ss_pred             ecccCCccc--------------------------------------------------chhhhhhhcccccccCCHHHH
Confidence            764322110                                                  011234455799999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCC
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHE  335 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp  335 (426)
                      .+..|+.++||||||+||+|++. -..+|........+.. -.-|+.+....+.-.+|+..||...|.+||++.+.--|+
T Consensus       435 ~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~-g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~  513 (516)
T KOG1033|consen  435 RGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRD-GIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHE  513 (516)
T ss_pred             hhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhc-CCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhh
Confidence            99999999999999999999996 3333322111111111 111222333334456999999999999999887777777


Q ss_pred             Cc
Q 014344          336 FF  337 (426)
Q Consensus       336 ~f  337 (426)
                      |.
T Consensus       514 ~~  515 (516)
T KOG1033|consen  514 FL  515 (516)
T ss_pred             hc
Confidence            64

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.82  E-value=1.2e-19  Score=163.01  Aligned_cols=139  Identities=19%  Similarity=0.236  Sum_probs=107.0

Q ss_pred             eecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeEE
Q 014344           23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVG  102 (426)
Q Consensus        23 ~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~  102 (426)
                      .||+|++|+||++.  .++..+++|+..........     ........++.+|+++++.+.|+++....-++......+
T Consensus         1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~-----~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPE-----LDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKT   73 (199)
T ss_pred             CCCCCceEEEEEee--cCCccEEEEEecCCcCcCch-----HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
Confidence            38999999999998  46788999986432110000     000112356788999999999887655554555666779


Q ss_pred             EEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          103 YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       103 lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      +||||++|++|.+++.....         .++.|++.+|.+||+.|++|||++|+||+++ ++.++++|||++...
T Consensus        74 lv~e~~~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGND---------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             EEEEEECCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            99999999999987653210         6788999999999999999999999999999 899999999988653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.81  E-value=1.4e-19  Score=162.54  Aligned_cols=150  Identities=17%  Similarity=0.169  Sum_probs=111.2

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhh-----hcccCCC----chhhHHHHHHHHHHHhcCCC--
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-----ELTNNDN----GDKYRRISFEQRVLRNVEHP--   86 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~-----~~~~~~~----~~~~~~~~~E~~il~~l~hp--   86 (426)
                      |.+.+.||.|+||.||++... +|+.||||++..........     .......    .........|..++..+.|+  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            888999999999999999874 79999999976532100000     0000000    01122467789999999877  


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      .++..++    ....++||||++|++|..+..        ...+..++.+++.++.++|+.||+||||||+||+++.++.
T Consensus        96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~  163 (198)
T cd05144          96 PVPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEK  163 (198)
T ss_pred             CCCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCc
Confidence            4445443    245589999999999876532        1345678889999999999999999999999999999999


Q ss_pred             EEEecccccccCCC
Q 014344          167 IMLVDFDLSTKLSP  180 (426)
Q Consensus       167 ikL~DFgls~~~~~  180 (426)
                      ++|+|||++..+..
T Consensus       164 ~~liDfg~~~~~~~  177 (198)
T cd05144         164 IYIIDWPQMVSTDH  177 (198)
T ss_pred             EEEEECCccccCCC
Confidence            99999999977643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.79  E-value=6.5e-19  Score=181.44  Aligned_cols=143  Identities=18%  Similarity=0.184  Sum_probs=111.9

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |...+.||+|+||+||++...  +..+++|+..........     ........++.+|+++++.++|++++....+...
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~-----~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~  407 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPE-----LDERLRTERTRAEARLLSEARRAGVPTPVIYDVD  407 (535)
T ss_pred             cCccceeccCCcEEEEEEeec--CccceeEEEecccccchh-----HHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence            456789999999999998864  344555543221111100     0011234578889999999999999888777777


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ....++||||++|++|.+++.          ....++.|++.+|.+||+.||+||||||+|||+ .++.++|+|||+++.
T Consensus       408 ~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        408 PEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             CCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            778899999999999998765          245688999999999999999999999999999 678999999999987


Q ss_pred             C
Q 014344          178 L  178 (426)
Q Consensus       178 ~  178 (426)
                      .
T Consensus       477 ~  477 (535)
T PRK09605        477 S  477 (535)
T ss_pred             C
Confidence            5

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.78  E-value=1.5e-18  Score=154.25  Aligned_cols=151  Identities=16%  Similarity=0.217  Sum_probs=103.6

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhc-------ccCCC----chhhHHHHHHHHHHHhcCCC--
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL-------TNNDN----GDKYRRISFEQRVLRNVEHP--   86 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~E~~il~~l~hp--   86 (426)
                      +++.||+|+||+||+|.+. +++.||||++............       .....    .........|...+..+.+.  
T Consensus         1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~   79 (187)
T cd05119           1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV   79 (187)
T ss_pred             CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence            3578999999999999986 8999999998653221110000       00000    00011224567777777544  


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHH-HHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccC
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~-l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~  164 (426)
                      .+++++++    ...++||||++|+++.. .+....   . ...++.++.+++.++.++|. .||+||||||+||+++ +
T Consensus        80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~  150 (187)
T cd05119          80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D  150 (187)
T ss_pred             CCCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C
Confidence            35555543    23589999999855431 111111   1 16678899999999999999 9999999999999999 9


Q ss_pred             CcEEEecccccccCCC
Q 014344          165 GHIMLVDFDLSTKLSP  180 (426)
Q Consensus       165 g~ikL~DFgls~~~~~  180 (426)
                      +.++|+|||++.....
T Consensus       151 ~~~~liDfg~a~~~~~  166 (187)
T cd05119         151 GKVYIIDVPQAVEIDH  166 (187)
T ss_pred             CcEEEEECcccccccC
Confidence            9999999999987643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.77  E-value=4.5e-18  Score=156.72  Aligned_cols=148  Identities=22%  Similarity=0.298  Sum_probs=108.1

Q ss_pred             eeec-ccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc--ceeeeeeecC
Q 014344           22 SALG-RGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL--PRLRGVLSTD   98 (426)
Q Consensus        22 ~~LG-~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i--v~l~~~~~~~   98 (426)
                      ..|| .|+.|+||.+..  .+..++||.+.+..+..+..............++.+|+.++..|.|++|  +..+++....
T Consensus        37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            5677 888899998876  3788999988653321111000000111234678889999999998775  6677664332


Q ss_pred             -CeE---EEEEeccCC-CChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           99 -KFV---GYAIDYCPG-RDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        99 -~~~---~lV~Ey~~g-g~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                       ...   ++|||+++| .+|.+++..   ..+++..    +.||+.+|.+||++||+||||||+|||++.++.++|+|||
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg  187 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQE---APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD  187 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhc---CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence             222   599999997 689887653   2355543    5689999999999999999999999999999999999999


Q ss_pred             ccccC
Q 014344          174 LSTKL  178 (426)
Q Consensus       174 ls~~~  178 (426)
                      .+...
T Consensus       188 ~~~~~  192 (239)
T PRK01723        188 RGELR  192 (239)
T ss_pred             CcccC
Confidence            98765

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.76  E-value=5.5e-18  Score=167.21  Aligned_cols=199  Identities=24%  Similarity=0.360  Sum_probs=152.4

Q ss_pred             HHhcCCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC-cccCCCCCC
Q 014344           80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGI-VYRDLKPEN  158 (426)
Q Consensus        80 l~~l~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~gi-iHrDlKp~N  158 (426)
                      |+.+.|.|+.++++...++...+.|.+||..|+|.+.+... ...++.--...++++|+.||.|||...| .|+.++..|
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n   79 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN   79 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence            45688999999999999999999999999999999998763 3447777888899999999999998755 999999999


Q ss_pred             eeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          159 IMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS  238 (426)
Q Consensus       159 iLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (426)
                      .+++....+||+|||+...........                                                     
T Consensus        80 Clvd~~w~lklt~~Gl~~~~~~~~~~~-----------------------------------------------------  106 (484)
T KOG1023|consen   80 CLVDSRWVLKLTDFGLNSLLEETAEPE-----------------------------------------------------  106 (484)
T ss_pred             ceeeeeEEEEechhhhccccccccccc-----------------------------------------------------
Confidence            999999999999999987653200000                                                     


Q ss_pred             CCccccccCCCCccchhhcCCC-------CChhhHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhc-CC----CC
Q 014344          239 EKSNSFVGTEEYVAPEIIEGKG-------HDFAVDWWSLGVVLHEMLYGATPFRGSS----RKETFYRILC-RP----PD  302 (426)
Q Consensus       239 ~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~~~~i~~-~~----~~  302 (426)
                       ......-...|.|||.+.+..       .+.+.|+||+|++++|+++...||....    ..+...++.. ..    |.
T Consensus       107 -~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~  185 (484)
T KOG1023|consen  107 -AHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPS  185 (484)
T ss_pred             -ccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcc
Confidence             000001233589999998742       3567999999999999999999997632    2344444433 11    11


Q ss_pred             CC---CCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          303 LV---GEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       303 ~~---~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ..   ..++.+..+++.||..+|..||+++.+..
T Consensus       186 i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  186 IELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             hhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence            11   23456889999999999999999988753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.70  E-value=1.1e-16  Score=136.02  Aligned_cols=134  Identities=19%  Similarity=0.273  Sum_probs=112.0

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC--CCcceeeeeeec
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH--PLLPRLRGVLST   97 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~iv~l~~~~~~   97 (426)
                      +++.||.|.++.||++....  ..+++|+......               ...+..|+.+++.+.|  +++++++.++..
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~---------------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~   64 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK---------------GADREREVAILQLLARKGLPVPKVLASGES   64 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc---------------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC
Confidence            56889999999999999744  7899998733210               2457779999999976  599999999888


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCCCCeeeccCCcEEEecccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM---GIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~---giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      .+..+++|||+.|+.+..+         +......++.+++.+|.+||..   +++|||++|+|||++..+.++++|||.
T Consensus        65 ~~~~~~v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~  135 (155)
T cd05120          65 DGWSYLLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEY  135 (155)
T ss_pred             CCccEEEEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccc
Confidence            8899999999998877654         4455667788999999999985   799999999999999989999999999


Q ss_pred             cccCC
Q 014344          175 STKLS  179 (426)
Q Consensus       175 s~~~~  179 (426)
                      +....
T Consensus       136 ~~~~~  140 (155)
T cd05120         136 AGYGP  140 (155)
T ss_pred             ccCCC
Confidence            87643

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.70  E-value=2.3e-17  Score=162.98  Aligned_cols=266  Identities=24%  Similarity=0.278  Sum_probs=200.3

Q ss_pred             CCCCCCCCCcEEEeeecc--cCceEEEEEEE--cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344            9 PIRSLDFSCLRIVSALGR--GAKGVVFLVKD--VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~--G~~g~V~~a~~--~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      +.-.+.-..+.+.+.+|.  |.+|.||.+..  ..++..+|+|.-..-.           ..+..-.+-.+|....++++
T Consensus       107 ~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-----------s~p~~~~~k~~~~~s~~~i~  175 (524)
T KOG0601|consen  107 PFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-----------SPPLDSKRKLREFLSHHKID  175 (524)
T ss_pred             CccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-----------CCccccccccchhhcccccC
Confidence            334455556889999999  99999999999  8899999999732111           00111122333555566665


Q ss_pred             -CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHH----HHHHHHHCCCcccCCCCCCe
Q 014344           85 -HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL----ALEYLHNMGIVYRDLKPENI  159 (426)
Q Consensus        85 -hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~----aL~~LH~~giiHrDlKp~Ni  159 (426)
                       |++.++.+..++..+.+|+-+|+| |.+|.++.... ...+++..++.++.+...    ||.++|+.+++|-|+||+||
T Consensus       176 ~~~~~v~~~~~~e~~~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i  253 (524)
T KOG0601|consen  176 SHENPVRDSPAWEGSGILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANI  253 (524)
T ss_pred             ccccccccCcccccCCcceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhhe
Confidence             899999999999999999999999 48888776543 344889999999999999    99999999999999999999


Q ss_pred             eeccC-CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          160 MIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS  238 (426)
Q Consensus       160 Ll~~~-g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (426)
                      ++..+ ...+++|||+...+....-...                                                   .
T Consensus       254 ~~~~~~~s~~~~df~~v~~i~~~~~~~~---------------------------------------------------~  282 (524)
T KOG0601|consen  254 FTTSDWTSCKLTDFGLVSKISDGNFSSV---------------------------------------------------F  282 (524)
T ss_pred             ecccccceeecCCcceeEEccCCccccc---------------------------------------------------e
Confidence            99999 7899999999988764321000                                                   0


Q ss_pred             CCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 014344          239 EKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS--SRKETFYRILCRPPDLVGEPTPLRNLIRR  316 (426)
Q Consensus       239 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~li~~  316 (426)
                      .....--|...|++||+..+. +++..|++|+|.+..+..++..+....  +....+.+.......+.+.+..+...+..
T Consensus       283 ~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~  361 (524)
T KOG0601|consen  283 KVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQ  361 (524)
T ss_pred             eeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHH
Confidence            001111366779999998765 688999999999999999887766544  33333333332222333456667779999


Q ss_pred             HhccCCCCCCChHHHhcCCCcCC
Q 014344          317 LLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      |+..+|..|++++.+++|++...
T Consensus       362 ~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  362 MLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hcCcchhhhhHHHHHhccccccc
Confidence            99999999999999999999874

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.59  E-value=1.2e-15  Score=154.28  Aligned_cols=158  Identities=11%  Similarity=0.177  Sum_probs=100.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhh-----------------hhcccCCCc----hhhHH-
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS-----------------KELTNNDNG----DKYRR-   72 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~-----------------~~~~~~~~~----~~~~~-   72 (426)
                      +.+|.. +.||+|++|.||.|+.+.+|+.||||+..+.....-.                 .........    +..+. 
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            345666 7899999999999999888999999999754321100                 000000000    11222 


Q ss_pred             -----HHHHHHHHHhcC----CCCcceeeeeee-cCCeEEEEEeccCCCChHHHHHHhccC----CCCHHHHHHHHHHHH
Q 014344           73 -----ISFEQRVLRNVE----HPLLPRLRGVLS-TDKFVGYAIDYCPGRDLHSLRKQQSEQ----MFSDDTIRFYAAELV  138 (426)
Q Consensus        73 -----~~~E~~il~~l~----hp~iv~l~~~~~-~~~~~~lV~Ey~~gg~L~~l~~~~~~~----~l~~~~~~~~~~qil  138 (426)
                           +..|...+.++.    +...+.+-.++. -....++||||++|+.+.++..-...+    .+.+..+..++.|++
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif  277 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF  277 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence                 333444444432    332233333332 244567999999999998753211111    244555555665554


Q ss_pred             HHHHHHHHCCCcccCCCCCCeeeccCC----cEEEecccccccCCC
Q 014344          139 LALEYLHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSP  180 (426)
Q Consensus       139 ~aL~~LH~~giiHrDlKp~NiLl~~~g----~ikL~DFgls~~~~~  180 (426)
                             ..|++|+|+||.||+++.+|    .++++|||++..+..
T Consensus       278 -------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 -------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                   58999999999999999888    999999999988754

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.59  E-value=1e-14  Score=145.77  Aligned_cols=152  Identities=16%  Similarity=0.237  Sum_probs=100.4

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhc-------------cc----CCCchh----hH------HHH
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL-------------TN----NDNGDK----YR------RIS   74 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~-------------~~----~~~~~~----~~------~~~   74 (426)
                      +.||+|++|.||+|+. .+|+.||||+........-...+             ..    ......    ..      .+.
T Consensus       123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            5699999999999987 47899999998654211110000             00    000000    01      255


Q ss_pred             HHHHHHHhcC-----CCCc--ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHH-HHHHHHH
Q 014344           75 FEQRVLRNVE-----HPLL--PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL-ALEYLHN  146 (426)
Q Consensus        75 ~E~~il~~l~-----hp~i--v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~-aL~~LH~  146 (426)
                      .|...+.++.     ++++  ++++.  ...+..++||||++|++|.++......+ ..   ...++.+++. .+..+|.
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~---~~~ia~~~~~~~l~ql~~  275 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAG-LD---RKALAENLARSFLNQVLR  275 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcC-CC---HHHHHHHHHHHHHHHHHh
Confidence            5666666652     3332  33332  2234568999999999998875532211 22   2334555555 4788999


Q ss_pred             CCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          147 MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      .|++|+|+||.||+++.+|.++|+|||++..+.+
T Consensus       276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            9999999999999999999999999999988753

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.54  E-value=6.9e-14  Score=123.67  Aligned_cols=151  Identities=15%  Similarity=0.214  Sum_probs=105.6

Q ss_pred             EeeecccCceEEEEEEEcC------CCceEEEEEeehhhHH--hhhhhcccCC-------CchhhHH----HHHHHHHHH
Q 014344           21 VSALGRGAKGVVFLVKDVE------SSESFALKVIWRDLIE--KKSKELTNND-------NGDKYRR----ISFEQRVLR   81 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~------~~~~vAiK~~~~~~~~--~~~~~~~~~~-------~~~~~~~----~~~E~~il~   81 (426)
                      ...||.|--+.||.|....      .+..+|||+..-....  ..........       .....+.    ...|.+.|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3578999999999998653      3579999998643221  1111110000       0111223    337999999


Q ss_pred             hcCC--CCcceeeeeeecCCeEEEEEeccCCCChHH-HHHHhccCCCCHHHHHHHHHHHHHHHHHH-HHCCCcccCCCCC
Q 014344           82 NVEH--PLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLALEYL-HNMGIVYRDLKPE  157 (426)
Q Consensus        82 ~l~h--p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~-l~~~~~~~~l~~~~~~~~~~qil~aL~~L-H~~giiHrDlKp~  157 (426)
                      ++..  -.++.++++    ..-++||||+.+..+.. .++.   ..+++..+..+..|++.+|..| |+.|||||||++.
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~  154 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY  154 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence            9963  567777764    45679999997654432 2221   2356667778889999999999 8999999999999


Q ss_pred             CeeeccCCcEEEecccccccCC
Q 014344          158 NIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       158 NiLl~~~g~ikL~DFgls~~~~  179 (426)
                      |||++ ++.+.|+|||.+....
T Consensus       155 NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         155 NMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             HEEEE-CCcEEEEECCCceeCC
Confidence            99997 5789999999887663

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.51  E-value=1.1e-14  Score=144.10  Aligned_cols=253  Identities=23%  Similarity=0.234  Sum_probs=187.2

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc-CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV-ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPL   87 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~   87 (426)
                      ...-...+|..+..||.|.|+.|+.+... .++..|++|...+.......           ...-..|+.+...+. |.+
T Consensus       259 ~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~-----------di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  259 WTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFAS-----------DIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             cceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHh-----------hhcchhhhhHhhHhhcccc
Confidence            35566788999999999999999998865 67888999987554332221           112233666666664 899


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-Cc
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-GH  166 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-g~  166 (426)
                      ++.++..|......|+-.|||.++++..-+  ....++.+...+.+..|++.++.++|++.++|+|+||.||++..+ +.
T Consensus       328 ~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~  405 (524)
T KOG0601|consen  328 SVGKNSSWSQLRQGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFF  405 (524)
T ss_pred             cCCCCCCccccccccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhh
Confidence            999999888888888999999999887544  233568899999999999999999999999999999999999986 78


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      .++.|||..+.+.-..                                                           ..+..
T Consensus       406 ~~~~~~~~~t~~~~~~-----------------------------------------------------------~~~~~  426 (524)
T KOG0601|consen  406 SKLGDFGCWTRLAFSS-----------------------------------------------------------GVFHH  426 (524)
T ss_pred             hhccccccccccceec-----------------------------------------------------------ccccc
Confidence            8999999886532111                                                           11112


Q ss_pred             CCCCc--cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYV--APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~--aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      +-.+.  +|+......+..+.|++|||..+++.++|.+.-......   ..+. ...+...+....+..+...++..++.
T Consensus       427 ~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~  503 (524)
T KOG0601|consen  427 IDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LTIRSGDTPNLPGLKLQLQVLLKVMINPDRK  503 (524)
T ss_pred             cccccccchhhccccccccccccccccccccccccCcccCcccccc---eeeecccccCCCchHHhhhhhhhhhcCCccc
Confidence            22333  555566677889999999999999999986543222211   1222 12334444457788899999999999


Q ss_pred             CCCChHHHhcCCCc
Q 014344          324 KRIGVEEIKGHEFF  337 (426)
Q Consensus       324 ~R~s~~eil~hp~f  337 (426)
                      .|+.+.++..|+=|
T Consensus       504 ~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  504 RRPSAVELSLHSEF  517 (524)
T ss_pred             cchhhhhhcccchh
Confidence            99999999888644

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=3.4e-14  Score=130.45  Aligned_cols=209  Identities=19%  Similarity=0.230  Sum_probs=147.8

Q ss_pred             HHHHhcCCCCcceeeeeeecCC-----eEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC--C
Q 014344           78 RVLRNVEHPLLPRLRGVLSTDK-----FVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNM--G  148 (426)
Q Consensus        78 ~il~~l~hp~iv~l~~~~~~~~-----~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~--g  148 (426)
                      .-|-++.|.||++++.++.+.+     ...+++||+..|+|..++++..  ...+.....++|+-||+.||.|||+.  -
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp  198 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP  198 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence            3456677999999999986654     4789999999999999876432  33588889999999999999999987  5


Q ss_pred             CcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCC
Q 014344          149 IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPD  228 (426)
Q Consensus       149 iiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (426)
                      |+|+++..+-|++..+|-||+.--....... .           .                 .++               
T Consensus       199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~-s-----------~-----------------~~~---------------  234 (458)
T KOG1266|consen  199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP-S-----------V-----------------NST---------------  234 (458)
T ss_pred             cccCCcchhheeecCCceEEecccCccccch-h-----------h-----------------hhh---------------
Confidence            9999999999999999999885422111100 0           0                 000               


Q ss_pred             CCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCC-CCCCH---HHHHHHHhcCCCCCC
Q 014344          229 PPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF-RGSSR---KETFYRILCRPPDLV  304 (426)
Q Consensus       229 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf-~~~~~---~~~~~~i~~~~~~~~  304 (426)
                             . ......-.|-+.|.|||.=.....+-++|||++|....+|..+..-- .+.+.   .+...+......   
T Consensus       235 -------~-~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~le---  303 (458)
T KOG1266|consen  235 -------R-EAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLE---  303 (458)
T ss_pred             -------h-HhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeecc---
Confidence                   0 00001112567799999877677788999999999999999876542 22221   122222221111   


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                        ...-+++|++||+-.|..||++.+++.||-+=++.-.
T Consensus       304 --n~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVhsl  340 (458)
T KOG1266|consen  304 --NGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVHSL  340 (458)
T ss_pred             --CccccCcCcccccCCCCCCcchhhhhcCceeeecchH
Confidence              1223689999999999999999999999987655443

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.50  E-value=3.6e-13  Score=134.76  Aligned_cols=141  Identities=13%  Similarity=0.158  Sum_probs=109.9

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |.+ ....-++.+..-.+..+.++.+|.+.+++...-             .....+.+-++-|+.++||+|+++++.++.
T Consensus        15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~-------------~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~   80 (690)
T KOG1243|consen   15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG-------------EVTELAKRAVKRLKTLRHPNILSYLDTTEE   80 (690)
T ss_pred             ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc-------------hhhHHHHHHHHHhhhccCchhhhhhhhhcc
Confidence            444 333333333332456678889999998844321             233445556788999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH-NMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH-~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ++.+|+|+|-+  ..|..+++..     ....+..-+.||+.||.+|| +.+++|++|.-.-|+++..|..||++|.++.
T Consensus        81 ~~~~ylvTErV--~Pl~~~lk~l-----~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~  153 (690)
T KOG1243|consen   81 EGTLYLVTERV--RPLETVLKEL-----GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVS  153 (690)
T ss_pred             cCceEEEeecc--ccHHHHHHHh-----HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEe
Confidence            99999999998  5777777754     36777788899999999998 6799999999999999999999999999886


Q ss_pred             cCC
Q 014344          177 KLS  179 (426)
Q Consensus       177 ~~~  179 (426)
                      ...
T Consensus       154 ~~~  156 (690)
T KOG1243|consen  154 KAS  156 (690)
T ss_pred             ccc
Confidence            543

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.49  E-value=1.7e-13  Score=119.42  Aligned_cols=128  Identities=16%  Similarity=0.204  Sum_probs=96.2

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC-cceeeeeeecCC
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-LPRLRGVLSTDK   99 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~~~~~~   99 (426)
                      ++.|+.|.++.||+++..  ++.|++|+......              .......|+.+++.+.+.+ +++++....  .
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~--------------~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~   64 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE--------------LLINRENEAENSKLAAEAGIGPKLYYFDP--E   64 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc--------------cccCHHHHHHHHHHHHHhCCCCceEEEeC--C
Confidence            467899999999999864  78899998733210              1123466889999886544 456666543  3


Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC-----cccCCCCCCeeeccCCcEEEecccc
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGI-----VYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~gi-----iHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      ..++||||++|.++...      . ..   ...++.+++.+|..||+.++     +|||++|.||+++ ++.++++|||.
T Consensus        65 ~~~lv~e~i~G~~l~~~------~-~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~  133 (170)
T cd05151          65 TGVLITEFIEGSELLTE------D-FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEY  133 (170)
T ss_pred             CCeEEEEecCCCccccc------c-cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccc
Confidence            35799999999887643      0 11   13456789999999999985     9999999999999 67899999999


Q ss_pred             ccc
Q 014344          175 STK  177 (426)
Q Consensus       175 s~~  177 (426)
                      +..
T Consensus       134 a~~  136 (170)
T cd05151         134 AGM  136 (170)
T ss_pred             ccC
Confidence            875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.27  E-value=5.7e-11  Score=101.44  Aligned_cols=152  Identities=20%  Similarity=0.220  Sum_probs=110.0

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCC
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      .+..|-+|+-+.|+.+.  ..|+.+.||.=..........     +..-..++..+|+++|.++.--.|.-..=+|.+..
T Consensus        11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~L-----D~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~   83 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPAL-----DQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY   83 (229)
T ss_pred             cceeeeccceeeEeeec--cCCceeEEeecccccccchHH-----HHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence            67788899999999887  578888888532221111100     01112467788999999987555554444556666


Q ss_pred             eEEEEEeccCC-CChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC---cEEEeccccc
Q 014344          100 FVGYAIDYCPG-RDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG---HIMLVDFDLS  175 (426)
Q Consensus       100 ~~~lV~Ey~~g-g~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g---~ikL~DFgls  175 (426)
                      .-.|+|||++| .++.+++.........+.....++.+|=..+.-||..+|||+||..+||++..+|   .+.|+|||++
T Consensus        84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls  163 (229)
T KOG3087|consen   84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLS  163 (229)
T ss_pred             CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecch
Confidence            77899999987 4677777655444344445477888999999999999999999999999998766   3589999998


Q ss_pred             ccC
Q 014344          176 TKL  178 (426)
Q Consensus       176 ~~~  178 (426)
                      ..-
T Consensus       164 ~~s  166 (229)
T KOG3087|consen  164 SVS  166 (229)
T ss_pred             hcc
Confidence            653

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.26  E-value=1.9e-10  Score=112.21  Aligned_cols=214  Identities=18%  Similarity=0.228  Sum_probs=154.1

Q ss_pred             CceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec----CCeEEE
Q 014344           28 AKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST----DKFVGY  103 (426)
Q Consensus        28 ~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~----~~~~~l  103 (426)
                      -..+.|+|....+|..|++|.+.-.....             ......-+++++++.|+|||.+.++|.+    +..+++
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~-------------~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~Slvl  354 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQS-------------TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVL  354 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccC-------------cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEE
Confidence            45689999999999999999983322111             1123345788999999999999999973    557999


Q ss_pred             EEeccCC-CChHHHHHHh-------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344          104 AIDYCPG-RDLHSLRKQQ-------------SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus       104 V~Ey~~g-g~L~~l~~~~-------------~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      |++|.++ ++|.++--..             .+...++..++.|+.|+..||.++|+.|+.-+-|.|.+||++.+.+|+|
T Consensus       355 vYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIri  434 (655)
T KOG3741|consen  355 VYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRI  434 (655)
T ss_pred             EEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEE
Confidence            9999986 5666642111             1224788999999999999999999999999999999999999889999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      ...|....+....                                                               +   
T Consensus       435 S~C~i~Dvl~~d~---------------------------------------------------------------~---  448 (655)
T KOG3741|consen  435 SGCGIMDVLQEDP---------------------------------------------------------------T---  448 (655)
T ss_pred             ecccceeeecCCC---------------------------------------------------------------C---
Confidence            8887665442210                                                               0   


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCC-CCCCCHHHH-HHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKET-FYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~p-f~~~~~~~~-~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                          +-+.+   -.+-|.=.||.++..|.+|+.- +......+. ...|.      ...+.+++++|.-+...++.. -+
T Consensus       449 ----~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~------~~yS~D~rn~v~yl~s~~~~~-ks  514 (655)
T KOG3741|consen  449 ----EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT------TTYSTDLRNVVEYLESLNFRE-KS  514 (655)
T ss_pred             ----cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh------hhhhHHHHHHHHHHHhcCccc-cc
Confidence                11111   1356888999999999999643 222222222 22221      234678899999999888886 67


Q ss_pred             hHHHhcC
Q 014344          328 VEEIKGH  334 (426)
Q Consensus       328 ~~eil~h  334 (426)
                      +.+++.|
T Consensus       515 I~~llp~  521 (655)
T KOG3741|consen  515 IQDLLPM  521 (655)
T ss_pred             HHHHHHH
Confidence            7777755

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=6.4e-11  Score=101.55  Aligned_cols=140  Identities=19%  Similarity=0.188  Sum_probs=97.0

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCCeE
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~  101 (426)
                      ..+++|+-+.++.+..  -|..+.+|.=.+.......     .+..-...+..+|.+++.++.--.|+...=++.+...-
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~-----LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~   74 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPE-----LDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNG   74 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCcccCChH-----HHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC
Confidence            3578999999998854  3445666643222111110     00011245677899999998755554444344566677


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      .|+|||++|-.|.+++...     .    ..++..+=.-+.-||..||||+||.+.||++..++ +.++||||+..-
T Consensus        75 ~I~me~I~G~~lkd~l~~~-----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s  141 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA-----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS  141 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc-----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence            7999999998888887654     1    23456666777889999999999999999997654 999999998753

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.24  E-value=5.9e-11  Score=107.96  Aligned_cols=141  Identities=20%  Similarity=0.252  Sum_probs=104.1

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC--CCcceeeeeeecC-
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH--PLLPRLRGVLSTD-   98 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~iv~l~~~~~~~-   98 (426)
                      +.||.|..+.||++... +|+.+++|+......            ......+..|..+++.+.+  ..+++++.+.... 
T Consensus         4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~------------~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~   70 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGAL------------LPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS   70 (223)
T ss_pred             eecCCCccceEEEEEec-CCcceEEEeCCCccc------------CcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC
Confidence            67899999999999874 368999998743211            0123467789999999975  4467777776553 


Q ss_pred             --CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH------------------------------
Q 014344           99 --KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN------------------------------  146 (426)
Q Consensus        99 --~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~------------------------------  146 (426)
                        +..++||||++|.++......   ..+++.....++.+++.+|..||+                              
T Consensus        71 ~~~~~~~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (223)
T cd05154          71 VLGTPFYVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYD  147 (223)
T ss_pred             ccCCceEEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHH
Confidence              367899999999888764321   225666666677777777777773                              


Q ss_pred             --------------------------CCCcccCCCCCCeeecc--CCcEEEecccccccC
Q 014344          147 --------------------------MGIVYRDLKPENIMIQE--NGHIMLVDFDLSTKL  178 (426)
Q Consensus       147 --------------------------~giiHrDlKp~NiLl~~--~g~ikL~DFgls~~~  178 (426)
                                                ..++|+|++|.||+++.  ++.+.|+||+.+..-
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g  207 (223)
T cd05154         148 ASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG  207 (223)
T ss_pred             hhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence                                      24699999999999998  677899999988653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.19  E-value=1.1e-10  Score=102.85  Aligned_cols=137  Identities=20%  Similarity=0.217  Sum_probs=86.7

Q ss_pred             EEEEEEcCCCceEEEEEeehhhHHhhh-h-hccc-----------CCCchhhHHHHHHHHHHHhcCCC--Ccceeeeeee
Q 014344           32 VFLVKDVESSESFALKVIWRDLIEKKS-K-ELTN-----------NDNGDKYRRISFEQRVLRNVEHP--LLPRLRGVLS   96 (426)
Q Consensus        32 V~~a~~~~~~~~vAiK~~~~~~~~~~~-~-~~~~-----------~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~~   96 (426)
                      ||.|.. ..|+.+|||+.......-+. . ....           ...........+|.+.|.++..-  ++++++++. 
T Consensus         2 Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    2 VYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             EEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            888887 55789999998643211110 0 0000           01111234677899999999855  577777553 


Q ss_pred             cCCeEEEEEeccC--CCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHH-HHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           97 TDKFVGYAIDYCP--GRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY-LHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        97 ~~~~~~lV~Ey~~--gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~-LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                         ..++||||+.  |..+..+....    ++......++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+|||
T Consensus        80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~  151 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFG  151 (188)
T ss_dssp             ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GT
T ss_pred             ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecC
Confidence               2369999998  76776654422    2245566777888886655 579999999999999999877 99999999


Q ss_pred             ccccC
Q 014344          174 LSTKL  178 (426)
Q Consensus       174 ls~~~  178 (426)
                      .+...
T Consensus       152 qav~~  156 (188)
T PF01163_consen  152 QAVDS  156 (188)
T ss_dssp             TEEET
T ss_pred             cceec
Confidence            88764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=2.2e-11  Score=122.60  Aligned_cols=160  Identities=21%  Similarity=0.279  Sum_probs=116.2

Q ss_pred             HHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCC
Q 014344          135 AELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSG  213 (426)
Q Consensus       135 ~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (426)
                      .++..||.|+|. .++||+.|.|++|.++..|..||+.|+++....+.......                          
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~--------------------------  159 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFS--------------------------  159 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccc--------------------------
Confidence            345599999996 59999999999999999999999999998765432210000                          


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHH-hCCCCCCCCCHHHH
Q 014344          214 ISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET  292 (426)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~  292 (426)
                        ..+                   ....-...-...|.|||++.+...+.++|++|+||++|.+. .|+..+...+....
T Consensus       160 --~yd-------------------~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~  218 (700)
T KOG2137|consen  160 --EYD-------------------PPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS  218 (700)
T ss_pred             --cCC-------------------CCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcch
Confidence              000                   00011112345799999999988899999999999999998 67777766543333


Q ss_pred             HHHHh--c---CCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          293 FYRIL--C---RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       293 ~~~i~--~---~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                      +....  .   ..-.....|+++++-|.++|..++..||++.+++..|||.+.-
T Consensus       219 ~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  219 YSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG  272 (700)
T ss_pred             hhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence            22211  1   1111134578999999999999999999999999999998753

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.11  E-value=2e-09  Score=100.45  Aligned_cols=142  Identities=11%  Similarity=-0.003  Sum_probs=95.5

Q ss_pred             EEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc--ceeeeeeec-----CCeEEEE
Q 014344           32 VFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL--PRLRGVLST-----DKFVGYA  104 (426)
Q Consensus        32 V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i--v~l~~~~~~-----~~~~~lV  104 (426)
                      |+.+.  ..|+.|.||...........+.....  ..-...+.+|.+.+.+|..-+|  +.+..+++.     ...-+||
T Consensus        38 vvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~--~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV  113 (268)
T PRK15123         38 TLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSL--RMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII  113 (268)
T ss_pred             EEEEE--ECCEEEEEEEecCCcHHHHhhhhccc--ccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence            44443  45778999976332211100000000  0011246778888888853333  344444432     2357899


Q ss_pred             EeccCCC-ChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-------CCcEEEecccccc
Q 014344          105 IDYCPGR-DLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-------NGHIMLVDFDLST  176 (426)
Q Consensus       105 ~Ey~~gg-~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-------~g~ikL~DFgls~  176 (426)
                      ||+++|. +|.+++........+......++.+++..+.-||+.||+|||+++.|||++.       ++.+.|+||+.+.
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            9999876 7888875432344667788899999999999999999999999999999985       4689999999885


Q ss_pred             c
Q 014344          177 K  177 (426)
Q Consensus       177 ~  177 (426)
                      .
T Consensus       194 ~  194 (268)
T PRK15123        194 I  194 (268)
T ss_pred             c
Confidence            4

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.96  E-value=1.2e-08  Score=92.01  Aligned_cols=106  Identities=24%  Similarity=0.271  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHhcCCC--CcceeeeeeecC----CeEEEEEeccCCC-ChHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Q 014344           71 RRISFEQRVLRNVEHP--LLPRLRGVLSTD----KFVGYAIDYCPGR-DLHSLRKQQSEQMFSDDTIRFYAAELVLALEY  143 (426)
Q Consensus        71 ~~~~~E~~il~~l~hp--~iv~l~~~~~~~----~~~~lV~Ey~~gg-~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~  143 (426)
                      .+..+|...+..|..-  ..+..+++.+..    ...++|+|+++|. +|.+++.....  .+......++.++...+.-
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAK  133 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHH
Confidence            4677788888887533  345566665442    2458999999974 78888775433  6677788999999999999


Q ss_pred             HHHCCCcccCCCCCCeeeccCC---cEEEecccccccC
Q 014344          144 LHNMGIVYRDLKPENIMIQENG---HIMLVDFDLSTKL  178 (426)
Q Consensus       144 LH~~giiHrDlKp~NiLl~~~g---~ikL~DFgls~~~  178 (426)
                      ||++||+|+|++|.|||++.++   .+.|+||+-+...
T Consensus       134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            9999999999999999999887   8999999987754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.93  E-value=2.4e-08  Score=89.09  Aligned_cols=147  Identities=17%  Similarity=0.236  Sum_probs=91.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|.+++++-......|.+..  -+|+.+.+|+...........-.+.... ....+.......++...-..+..++-+.
T Consensus        31 ~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg-~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   31 NNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKG-SEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             CCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhcc-HHHHHHHHHHHHHHHcCccccccceeee
Confidence            458899999888888887776  5678999998854332111111111111 1122222222222222222222222222


Q ss_pred             -----ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           96 -----STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        96 -----~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                           .-....+++|||++|..|.++..      +++.    +...|..++.-||+.|+.|+|.+|.|++++.+ .++++
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iI  176 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIED------IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRII  176 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccchh------cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEE
Confidence                 22345568999999999877632      3332    34567788999999999999999999999855 59999


Q ss_pred             cccccc
Q 014344          171 DFDLST  176 (426)
Q Consensus       171 DFgls~  176 (426)
                      ||+..+
T Consensus       177 D~~~k~  182 (229)
T PF06176_consen  177 DTQGKR  182 (229)
T ss_pred             ECcccc
Confidence            998654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.91  E-value=1e-08  Score=93.21  Aligned_cols=149  Identities=17%  Similarity=0.231  Sum_probs=107.1

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhh----hhc-ccCCC----chhhHHHHHHHHHHHhcCCC--
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS----KEL-TNNDN----GDKYRRISFEQRVLRNVEHP--   86 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~----~~~-~~~~~----~~~~~~~~~E~~il~~l~hp--   86 (426)
                      +.++..||-|--|.||.|.+. .|.++|||.-.-...+-+.    +.. .....    ........+|.++|.+|...  
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            357789999999999999985 6899999976432221110    111 01111    11234577899999999754  


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      .+++.++    .+...+||||++|-.|..+.       +..+.+..++..|+.-+.-+-..||||+|+.+=||+++++|.
T Consensus       172 ~VP~P~~----~nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~  240 (304)
T COG0478         172 KVPKPIA----WNRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD  240 (304)
T ss_pred             CCCCccc----cccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence            7777765    46678999999998876542       234445556666777776666899999999999999999999


Q ss_pred             EEEecccccccC
Q 014344          167 IMLVDFDLSTKL  178 (426)
Q Consensus       167 ikL~DFgls~~~  178 (426)
                      +.++||.-+...
T Consensus       241 ~~vIDwPQ~v~~  252 (304)
T COG0478         241 IVVIDWPQAVPI  252 (304)
T ss_pred             EEEEeCcccccC
Confidence            999999876654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.88  E-value=9.4e-11  Score=116.82  Aligned_cols=241  Identities=20%  Similarity=0.164  Sum_probs=168.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC-cceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-LPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~   94 (426)
                      ..+...+-+++|+++++++.+...+...+ .+++...                  ....-++++|.+++||| .+..++-
T Consensus       242 kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~------------------l~~rl~~eLLdK~n~P~~~v~~~~d  302 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT------------------LSRRLAIELLDKVNNPNPVVRYLED  302 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc------------------hhhHHHHHHHHHccCCCCccccccc
Confidence            34777888999999999999876665555 6666322                  12334788999999999 7777777


Q ss_pred             eecCCeEEEEEeccCCC-ChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           95 LSTDKFVGYAIDYCPGR-DLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg-~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.+.+.+++|++|.++ +-...+.. ..-.+.+-+...+.+.-..+|++||+.-=+|||    ||+..+ +..++.||+
T Consensus       303 ~~~E~~~~i~~~i~s~~rs~~~~~~~-se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~  376 (829)
T KOG0576|consen  303 YDGEDYLWIPMRICSTGRSSALEMTV-SEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFA  376 (829)
T ss_pred             CCcccccchhhhhhcCCccccccCCh-hhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-ccccccccc
Confidence            88889999999999877 22111110 011133344445566677889999988668999    887765 788999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ....+....                                                         +.+++.+|+.++||
T Consensus       377 v~~~L~~~~---------------------------------------------------------~~~t~~~~~~~~~p  399 (829)
T KOG0576|consen  377 VPPQLTRTM---------------------------------------------------------KPRTAIGTPEPLAP  399 (829)
T ss_pred             CCcccCccc---------------------------------------------------------ccccCCCCCCCCCc
Confidence            877664321                                                         34567799999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCC---CCHHH-HHHHHHHhccCCCCCCC
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVG---EPTPL-RNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~---~~~~~-~~li~~~L~~dP~~R~s  327 (426)
                      |++....+..+.|.|++|+-..+|.-|.+|-..+...  ...+-..+  +.+..   ..+.. .++...|+..-|..|+.
T Consensus       400 ev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~--~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv  477 (829)
T KOG0576|consen  400 EVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAV--LPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKV  477 (829)
T ss_pred             hhhcccccccCCCccCCCcchhhcCCCCCCCCCCccc--cCCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCcc
Confidence            9999999999999999999888888887775432110  00000000  00000   01111 25788899999999999


Q ss_pred             hHHHhcCCCcCCC
Q 014344          328 VEEIKGHEFFKGV  340 (426)
Q Consensus       328 ~~eil~hp~f~~~  340 (426)
                      ..+++.|.+|.+.
T Consensus       478 ~mgacfsKvfngC  490 (829)
T KOG0576|consen  478 HMGACFSKVFNGC  490 (829)
T ss_pred             hhhHHHHHHhccC
Confidence            9999999988764

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.74  E-value=2.6e-08  Score=100.63  Aligned_cols=156  Identities=17%  Similarity=0.197  Sum_probs=93.7

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhh-------------hccc----CCCchh----hH------HHH
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-------------ELTN----NDNGDK----YR------RIS   74 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~-------------~~~~----~~~~~~----~~------~~~   74 (426)
                      .-|+.++-|.||.|+-+. |+.|||||.....-..-..             ....    ..-...    .+      .+.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            567899999999999855 9999999985432211110             0000    000011    11      134


Q ss_pred             HHHHHHHhcC-----CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014344           75 FEQRVLRNVE-----HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGI  149 (426)
Q Consensus        75 ~E~~il~~l~-----hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~gi  149 (426)
                      +|...+.++.     .|.+.--.=+++-.+.-.++|||++|-.+.+...... ..++...+.....++.  +..+=..|+
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~dgf  286 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRDGF  286 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCc
Confidence            4555555542     3433211112233455679999999988888743222 2244333322222211  233334799


Q ss_pred             cccCCCCCCeeeccCCcEEEecccccccCCCC
Q 014344          150 VYRDLKPENIMIQENGHIMLVDFDLSTKLSPK  181 (426)
Q Consensus       150 iHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~  181 (426)
                      +|.|.+|.||+++.+|.+.+.|||+...+.+.
T Consensus       287 fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         287 FHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             cccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence            99999999999999999999999999888653

>PRK09902 hypothetical protein; Provisional

Probab=98.73  E-value=2.6e-07  Score=82.16  Aligned_cols=145  Identities=14%  Similarity=0.137  Sum_probs=101.2

Q ss_pred             cccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC--cceeeeeeec----C
Q 014344           25 GRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL--LPRLRGVLST----D   98 (426)
Q Consensus        25 G~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~--iv~l~~~~~~----~   98 (426)
                      |+||-|-|+....  .|+.|-+|.-......    ..   ..+--...+.+|...|+.|..-+  ++.+...-..    .
T Consensus        27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~----s~---r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~   97 (216)
T PRK09902         27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFH----SV---RYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGE   97 (216)
T ss_pred             CCCCcceEEEEEe--CCcEEEEEeccCcccc----cc---cCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCc
Confidence            5688899998763  3446778865211100    00   00224567888999999986333  4444422111    2


Q ss_pred             CeEEEEEeccCC-CChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc--EEEeccccc
Q 014344           99 KFVGYAIDYCPG-RDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH--IMLVDFDLS  175 (426)
Q Consensus        99 ~~~~lV~Ey~~g-g~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~--ikL~DFgls  175 (426)
                      -.-+||+|-+.| -||.+++....-...++...+.++.+|..+|.-||+.|+.|+|+-+.|||++.+|.  ++++||--+
T Consensus        98 ~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~  177 (216)
T PRK09902         98 WRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS  177 (216)
T ss_pred             eEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence            246799997754 57888766544334677777889999999999999999999999999999987777  999999877


Q ss_pred             ccC
Q 014344          176 TKL  178 (426)
Q Consensus       176 ~~~  178 (426)
                      +..
T Consensus       178 r~~  180 (216)
T PRK09902        178 RRR  180 (216)
T ss_pred             chh
Confidence            654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.70  E-value=2.2e-07  Score=84.92  Aligned_cols=136  Identities=13%  Similarity=0.121  Sum_probs=84.7

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC--CcceeeeeeecCC
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP--LLPRLRGVLSTDK   99 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~~~~~   99 (426)
                      ..||.|..+.||+.    .+..+++|......               ....+.+|.++++.+..-  .+++.+++....+
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~---------------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~   67 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF---------------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGG   67 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC---------------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCC
Confidence            56799999999973    25567899873211               223467799999998643  3578888888888


Q ss_pred             eEEEEEeccCCCC-hH--------------HHH----HHhcc---CCCCHH-HHHHHHHH----------HHHH-HHHHH
Q 014344          100 FVGYAIDYCPGRD-LH--------------SLR----KQQSE---QMFSDD-TIRFYAAE----------LVLA-LEYLH  145 (426)
Q Consensus       100 ~~~lV~Ey~~gg~-L~--------------~l~----~~~~~---~~l~~~-~~~~~~~q----------il~a-L~~LH  145 (426)
                      ..++|||+++|.+ +.              ..+    ..-..   ...+.. ....+..+          +... ..+|.
T Consensus        68 ~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~  147 (226)
T TIGR02172        68 RLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIK  147 (226)
T ss_pred             eeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence            8899999999864 11              100    00000   001100 01111101          1111 22222


Q ss_pred             H----CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          146 N----MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       146 ~----~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      .    ..++|+|+.|.||+++.++ +.++||+.+..
T Consensus       148 ~~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       148 EVPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             hCCCCCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            1    2578999999999999888 99999998764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.65  E-value=2.8e-07  Score=98.23  Aligned_cols=202  Identities=22%  Similarity=0.276  Sum_probs=140.0

Q ss_pred             HHHHHHHHHHHhcCCCCcceeeeeeecCCeEE----EEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Q 014344           71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN  146 (426)
Q Consensus        71 ~~~~~E~~il~~l~hp~iv~l~~~~~~~~~~~----lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~  146 (426)
                      .....|...+.+..|+|++.++.+-.......    +..++|.+-++..++..-  ...+...++.+..+++.||.|+|+
T Consensus       227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~  304 (1351)
T KOG1035|consen  227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHS  304 (1351)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHH
Confidence            34455777788889999999988875544333    455889989998887654  348899999999999999999999


Q ss_pred             CCCcccCCCCC---CeeeccCCcEEEe--cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCC
Q 014344          147 MGIVYRDLKPE---NIMIQENGHIMLV--DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVH  221 (426)
Q Consensus       147 ~giiHrDlKp~---NiLl~~~g~ikL~--DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (426)
                      ....|.-|-..   +-..+..+.+.++  ||+.+..+....                                       
T Consensus       305 ~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~---------------------------------------  345 (1351)
T KOG1035|consen  305 LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNE---------------------------------------  345 (1351)
T ss_pred             hccceeEEecccccccccCccceeecchhhhcccccCCCcc---------------------------------------
Confidence            85555544444   3333455566666  887776553211                                       


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChh--hHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC
Q 014344          222 SPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFA--VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR  299 (426)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~--~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~  299 (426)
                                        ...+..-+..+.|||......+.++  .|+|.+|.....+..|..+-.......   ..+..
T Consensus       346 ------------------~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~---~~l~~  404 (1351)
T KOG1035|consen  346 ------------------KSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPV---SLLDV  404 (1351)
T ss_pred             ------------------cchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccchh---hhhcc
Confidence                              1222234556788888877766554  699999999999988765432211111   11100


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       300 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                           .......+++.+|+..++++|+++.+++.|+|.+.
T Consensus       405 -----~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  405 -----LSTSELLDALPKCLDEDSEERLSALELLTHPFLRF  439 (1351)
T ss_pred             -----ccchhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence                 01115678999999999999999999999999864

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.58  E-value=2.5e-07  Score=88.73  Aligned_cols=234  Identities=22%  Similarity=0.326  Sum_probs=146.4

Q ss_pred             EEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh-cCCCCcce-------
Q 014344           19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN-VEHPLLPR-------   90 (426)
Q Consensus        19 ~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~-------   90 (426)
                      ...+.||+|+-+-+|-.-..   .-.+-|++.+--.....                .-+..|.. -+||-+-.       
T Consensus        14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~a----------------qk~a~la~~p~~p~~~~rvaWPqa   74 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQA----------------QKVAELAATPDAPLLNYRVAWPQA   74 (637)
T ss_pred             CCCccccCCccceeeecchh---hchhheeecCCCchHHH----------------HHHHHhccCCCCcchhhhhcccHH
Confidence            35678999999999865432   22345777442211110                01122322 24554332       


Q ss_pred             -eeeeeecCCeEEEEEeccCCCC-hHHHH----HHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           91 -LRGVLSTDKFVGYAIDYCPGRD-LHSLR----KQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        91 -l~~~~~~~~~~~lV~Ey~~gg~-L~~l~----~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                       +++- .....+.+.|..+.|.. ...+.    +++....+...-+...++.++.|..-||..|.+-+|+.++|+|++++
T Consensus        75 ~L~G~-~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~  153 (637)
T COG4248          75 TLHGG-RRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDD  153 (637)
T ss_pred             HhhCC-CccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecC
Confidence             1111 12334788888887642 22221    22333446778889999999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.|.|.|=..-...                                ..                         +......
T Consensus       154 ~~V~LVdsDsfqi~--------------------------------~n-------------------------g~~~~cp  176 (637)
T COG4248         154 SKVVLVDSDSFQIN--------------------------------AN-------------------------GTLHLCP  176 (637)
T ss_pred             ceEEEEcccceeec--------------------------------cC-------------------------CceEecc
Confidence            99999985432111                                11                         1112233


Q ss_pred             ccCCCCccchhhc-----CCCCChhhHHHHHHHHHHHHHhC-CCCCCCCC-------HHHH-HHHHh------cC---CC
Q 014344          245 VGTEEYVAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYG-ATPFRGSS-------RKET-FYRIL------CR---PP  301 (426)
Q Consensus       245 ~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~-------~~~~-~~~i~------~~---~~  301 (426)
                      +|.+.|.+||.-.     +-.-+...|.|.||+++++++.| +.||.+-.       ..++ ...-.      ..   .+
T Consensus       177 Vg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p  256 (637)
T COG4248         177 VGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKP  256 (637)
T ss_pred             cCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCC
Confidence            6899999999754     34446789999999999999986 99997542       2221 10000      00   01


Q ss_pred             -----CCCCCCHHHHHHHHHHhcc--CCCCCCChH
Q 014344          302 -----DLVGEPTPLRNLIRRLLEK--DPTKRIGVE  329 (426)
Q Consensus       302 -----~~~~~~~~~~~li~~~L~~--dP~~R~s~~  329 (426)
                           .+.-.++.+..|..+|++.  ++.-|||++
T Consensus       257 ~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~  291 (637)
T COG4248         257 PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK  291 (637)
T ss_pred             CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence                 1112367788888999865  367899964

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.51  E-value=1.5e-06  Score=78.58  Aligned_cols=151  Identities=16%  Similarity=0.184  Sum_probs=100.4

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhh---------cccCCCchh--hHHHHHHHHHHHhcC--CCC
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE---------LTNNDNGDK--YRRISFEQRVLRNVE--HPL   87 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~---------~~~~~~~~~--~~~~~~E~~il~~l~--hp~   87 (426)
                      .-.|++|--+.||+|.. .++..+|+|++......-+...         .....+...  ..=...|..-|+++.  +-.
T Consensus        53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr  131 (268)
T COG1718          53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR  131 (268)
T ss_pred             EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            34777888899999986 5688999999976544332210         000001111  112455788888875  445


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCc
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~  166 (426)
                      +++.+.+.    .-.|||||+... -.-. -....-.+.+..+..+..+++..+.-|-. .|+||+||..=|||+. ++.
T Consensus       132 vP~Pi~~~----~nVLvMEfIg~~-g~pA-P~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~  204 (268)
T COG1718         132 VPEPIAFR----NNVLVMEFIGDD-GLPA-PRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGE  204 (268)
T ss_pred             CCCceeec----CCeEEEEeccCC-CCCC-CCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCe
Confidence            55666554    236999999533 1110 00111124444788888999999988876 8999999999999999 899


Q ss_pred             EEEecccccccCC
Q 014344          167 IMLVDFDLSTKLS  179 (426)
Q Consensus       167 ikL~DFgls~~~~  179 (426)
                      +.++|||-|....
T Consensus       205 p~iID~~QaV~~~  217 (268)
T COG1718         205 PYIIDVSQAVTID  217 (268)
T ss_pred             EEEEECccccccC
Confidence            9999999987764

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.48  E-value=1.3e-06  Score=88.14  Aligned_cols=153  Identities=18%  Similarity=0.209  Sum_probs=92.0

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhh-------------hcccCCC-----chhhH------HHHHHH
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-------------ELTNNDN-----GDKYR------RISFEQ   77 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~-------------~~~~~~~-----~~~~~------~~~~E~   77 (426)
                      +.||.-+.|.|+.|+-+. |+.|||||-....-..-..             .....-+     .+..+      .+.+|.
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            568999999999999866 9999999975422111000             0000000     00011      122333


Q ss_pred             H----HHHhcCCCC------cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           78 R----VLRNVEHPL------LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        78 ~----il~~l~hp~------iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      +    +.+.+.|-.      |++++--+  ...-.|+||||+|.-+.++-.-... .++...+...+.+...  .-+=..
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i~~~l~~~~~--~qIf~~  320 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKR-GISPHDILNKLVEAYL--EQIFKT  320 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHc-CCCHHHHHHHHHHHHH--HHHHhc
Confidence            3    333344555      55555433  3456799999999888776332222 2565544433333222  223356


Q ss_pred             CCcccCCCCCCeeecc----CCcEEEecccccccCCC
Q 014344          148 GIVYRDLKPENIMIQE----NGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       148 giiHrDlKp~NiLl~~----~g~ikL~DFgls~~~~~  180 (426)
                      |++|.|-+|.||++..    ++.+.+.|||+...+..
T Consensus       321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            8999999999999994    66899999999987754

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.46  E-value=2.4e-06  Score=77.94  Aligned_cols=140  Identities=26%  Similarity=0.369  Sum_probs=83.7

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC--Ccceeeeee---
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP--LLPRLRGVL---   95 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~~---   95 (426)
                      ++.|+.|..+.||++....  ..+++|+....               .....+..|..+++.|...  .+++++...   
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~---------------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~   64 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP---------------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD   64 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH---------------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC---------------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccc
Confidence            5789999999999999754  59999997433               1345677788898888633  356777643   


Q ss_pred             ecCCeEEEEEeccCCCChHH----------------HHH---Hhc--cCCCCHHH------HHHH---------------
Q 014344           96 STDKFVGYAIDYCPGRDLHS----------------LRK---QQS--EQMFSDDT------IRFY---------------  133 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~----------------l~~---~~~--~~~l~~~~------~~~~---------------  133 (426)
                      ......+++|++++|..+..                .+.   ...  ...+....      ....               
T Consensus        65 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (239)
T PF01636_consen   65 EFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDD  144 (239)
T ss_dssp             EETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred             cccccceEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhh
Confidence            23445799999999987776                111   110  00011000      0000               


Q ss_pred             HHHHHH-HHHHHHH-------CCCcccCCCCCCeeec-cCCcEEEeccccccc
Q 014344          134 AAELVL-ALEYLHN-------MGIVYRDLKPENIMIQ-ENGHIMLVDFDLSTK  177 (426)
Q Consensus       134 ~~qil~-aL~~LH~-------~giiHrDlKp~NiLl~-~~g~ikL~DFgls~~  177 (426)
                      ...+.. .+..+++       ..++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  145 LEELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             hHHHHHHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence            111222 3333432       3699999999999999 667778999998765

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.37  E-value=5.4e-06  Score=76.71  Aligned_cols=137  Identities=15%  Similarity=0.103  Sum_probs=83.8

Q ss_pred             eecccCc-eEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeeecCCe
Q 014344           23 ALGRGAK-GVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLSTDKF  100 (426)
Q Consensus        23 ~LG~G~~-g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~  100 (426)
                      .|-.|.+ +.||++...  +..+.+|+.....                ...+..|+++++.+. +--+++++++....+.
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~----------------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~   66 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP----------------TYELEREAERLRWLAGKLPVPEVIDYGSDDGR   66 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc----------------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCc
Confidence            3444555 789998753  4688889863211                234566888988885 4556788888877777


Q ss_pred             EEEEEeccCCCChHHHH----------------HHhcc-----CCCCHH------HHHHHHH----------------HH
Q 014344          101 VGYAIDYCPGRDLHSLR----------------KQQSE-----QMFSDD------TIRFYAA----------------EL  137 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~----------------~~~~~-----~~l~~~------~~~~~~~----------------qi  137 (426)
                      .++|||+++|.+|....                .....     ..+...      .....+.                .+
T Consensus        67 ~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (244)
T cd05150          67 AWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSA  146 (244)
T ss_pred             cEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCH
Confidence            89999999987765321                10000     011100      0000000                01


Q ss_pred             HHHHHHH-------HHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          138 VLALEYL-------HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       138 l~aL~~L-------H~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ...+..|       ....++|+|+.|.|||+++++.+.|+||+.+..
T Consensus       147 ~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         147 EELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             HHHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            1112222       123489999999999999988889999998764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.28  E-value=1.1e-05  Score=71.34  Aligned_cols=138  Identities=25%  Similarity=0.314  Sum_probs=92.2

Q ss_pred             CCcEEEeeecccCc-eEEEEEEEcCCCceEEEEEeehhhHHhh--------hhhcccCCCchhhHHHHHHHHHHHhcC--
Q 014344           16 SCLRIVSALGRGAK-GVVFLVKDVESSESFALKVIWRDLIEKK--------SKELTNNDNGDKYRRISFEQRVLRNVE--   84 (426)
Q Consensus        16 ~~y~i~~~LG~G~~-g~V~~a~~~~~~~~vAiK~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~E~~il~~l~--   84 (426)
                      .+++.++.||.|.- |.||+++.  .|+.||||+...-.....        ..............-|..|.+...+|+  
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            68999999999999 99999984  678999999321110000        000000111123446777877766664  


Q ss_pred             -CCCc--ceeeeeeecC------------------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Q 014344           85 -HPLL--PRLRGVLSTD------------------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY  143 (426)
Q Consensus        85 -hp~i--v~l~~~~~~~------------------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~  143 (426)
                       +.++  |+++|++.-.                  ....||-||.+...           .++...    +.+|+.-|..
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~~----~~~~~~dl~~  179 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIRD----IPQMLRDLKI  179 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchhH----HHHHHHHHHH
Confidence             5566  8999987322                  12367888776443           133333    3568888889


Q ss_pred             HHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344          144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus       144 LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      +|..||+-+|+++.|..     .=+|+|||.+
T Consensus       180 ~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHCCeeeccCcccccc-----CCEEEecccC
Confidence            99999999999999986     3489999864

>PLN02876 acyl-CoA dehydrogenase

Probab=98.22  E-value=1.5e-05  Score=86.57  Aligned_cols=148  Identities=20%  Similarity=0.331  Sum_probs=91.0

Q ss_pred             EEeeecccCceEEEEEEEcCCC--ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCc--ceeeee
Q 014344           20 IVSALGRGAKGVVFLVKDVESS--ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLL--PRLRGV   94 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~--~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i--v~l~~~   94 (426)
                      -++.|+.|.+..+|++.....+  ..+++|+......            ......+.+|+++|+.+. |+++  ++++.+
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~------------~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~  109 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL------------LQSAHAVEREYQVLRALGEHTDVPVPKVYCL  109 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc------------CccHHHHHHHHHHHHHHhhcCCCCCCcEEEE
Confidence            4678899999999998764432  3677777532210            011235778999999996 6655  777777


Q ss_pred             eecC---CeEEEEEeccCCCChHH--------------------HHH---HhccC-----------CCCHHHHHHHHHH-
Q 014344           95 LSTD---KFVGYAIDYCPGRDLHS--------------------LRK---QQSEQ-----------MFSDDTIRFYAAE-  136 (426)
Q Consensus        95 ~~~~---~~~~lV~Ey~~gg~L~~--------------------l~~---~~~~~-----------~l~~~~~~~~~~q-  136 (426)
                      +.+.   +..|+||||++|..+.+                    .+.   .....           .+....+..+..| 
T Consensus       110 ~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~  189 (822)
T PLN02876        110 CTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQY  189 (822)
T ss_pred             ecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHH
Confidence            6654   46789999999864321                    011   00000           0111233222222 


Q ss_pred             --------------HHHHHHHHHH-----------CCCcccCCCCCCeeeccC-C-cEEEecccccccCC
Q 014344          137 --------------LVLALEYLHN-----------MGIVYRDLKPENIMIQEN-G-HIMLVDFDLSTKLS  179 (426)
Q Consensus       137 --------------il~aL~~LH~-----------~giiHrDlKp~NiLl~~~-g-~ikL~DFgls~~~~  179 (426)
                                    +...+.+|..           ..+||+|++|.|||++.+ + .+-|.||.++..-.
T Consensus       190 ~~~~~~~~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd  259 (822)
T PLN02876        190 LASTGEGKPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN  259 (822)
T ss_pred             HHhhcccCCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence                          2233566633           249999999999999853 3 35799999987643

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.22  E-value=1e-05  Score=69.30  Aligned_cols=130  Identities=23%  Similarity=0.292  Sum_probs=91.4

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc-eeeeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP-RLRGVLS   96 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv-~l~~~~~   96 (426)
                      .++.+.||+|.+|.||++..  .|..+|+|+-..+               .....+..|+++|..+.-.++. +++.+-.
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~d---------------s~r~~l~kEakiLeil~g~~~~p~vy~yg~   86 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEW--RGGEVALKVRRRD---------------SPRRNLEKEAKILEILAGEGVTPEVYFYGE   86 (201)
T ss_pred             hhhhhhhhcccccEEEEeec--cCceEEEEEecCC---------------cchhhHHHHHHHHHHhhhcCCCceEEEech
Confidence            45678899999999999984  5669999986332               2455788899999999866554 4554432


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC-CCCeeeccCCcEEEeccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLK-PENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlK-p~NiLl~~~g~ikL~DFgls  175 (426)
                      +    ++.|||+.|-.|.++...     .....+    ..++.+---|-..||-|+.|. |...+|..++.+.|+||..|
T Consensus        87 ~----~i~me~i~G~~L~~~~~~-----~~rk~l----~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~A  153 (201)
T COG2112          87 D----FIRMEYIDGRPLGKLEIG-----GDRKHL----LRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSA  153 (201)
T ss_pred             h----hhhhhhhcCcchhhhhhc-----ccHHHH----HHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccch
Confidence            2    345999999898876432     122222    235555444556799999885 56666666779999999988


Q ss_pred             cc
Q 014344          176 TK  177 (426)
Q Consensus       176 ~~  177 (426)
                      +.
T Consensus       154 t~  155 (201)
T COG2112         154 TF  155 (201)
T ss_pred             hh
Confidence            73

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.15  E-value=6.2e-05  Score=67.03  Aligned_cols=144  Identities=22%  Similarity=0.366  Sum_probs=95.2

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhh---hcccCCCchhhHHHHHHHHHHHhcC------CCCcceee
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK---ELTNNDNGDKYRRISFEQRVLRNVE------HPLLPRLR   92 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~---~~~~~~~~~~~~~~~~E~~il~~l~------hp~iv~l~   92 (426)
                      ..||+|+.-.||.  + ......+|||+..........   -..........+...+|+.....+.      +.+|.+++
T Consensus         7 ~~i~~G~~R~cy~--H-P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQ--H-PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEE--C-CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            4689999999994  3 344567899997665111100   0000011123455666666655554      88999999


Q ss_pred             eeeecCCeEEEEEeccCC------CChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-
Q 014344           93 GVLSTDKFVGYAIDYCPG------RDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-  165 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~g------g~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-  165 (426)
                      |+.+++....+|+|.+.+      -+|.++++.   +.+++ .++.   .+-.-.+||-+++|+.+||+|.||++...+ 
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~  156 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE---GGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS  156 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHc---CCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence            999999999999998853      357777643   23655 3333   333445788899999999999999997432 


Q ss_pred             ---cEEEec-cccc
Q 014344          166 ---HIMLVD-FDLS  175 (426)
Q Consensus       166 ---~ikL~D-Fgls  175 (426)
                         .+.|+| ||..
T Consensus       157 ~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  157 GEFRLVLIDGLGEK  170 (199)
T ss_pred             CceEEEEEeCCCCc
Confidence               578888 5543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.12  E-value=1.8e-05  Score=72.86  Aligned_cols=73  Identities=12%  Similarity=0.156  Sum_probs=45.9

Q ss_pred             eeecccCce-EEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC---Ccceeeeeeec
Q 014344           22 SALGRGAKG-VVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP---LLPRLRGVLST   97 (426)
Q Consensus        22 ~~LG~G~~g-~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~iv~l~~~~~~   97 (426)
                      ..|+.|+.. .||++.     ..+.+|+....               .....+..|.++|+.|...   -++.+++....
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~---------------~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~   62 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSAA---------------GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEP   62 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCcc---------------chHHHHHHHHHHHHHHhccCCCCCCceeecCCC
Confidence            457777766 588762     35777875321               1223677799999888632   45555554433


Q ss_pred             C---CeEEEEEeccCCCChH
Q 014344           98 D---KFVGYAIDYCPGRDLH  114 (426)
Q Consensus        98 ~---~~~~lV~Ey~~gg~L~  114 (426)
                      .   ...+++|++++|.++.
T Consensus        63 ~~~~~~~~~l~~~i~G~~l~   82 (235)
T cd05155          63 GEGYPWPWSVYRWLEGETAT   82 (235)
T ss_pred             ccCCCcceEEEEeecCCCCC
Confidence            2   2458899999987763

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=98.09  E-value=5.1e-07  Score=98.30  Aligned_cols=258  Identities=14%  Similarity=-0.031  Sum_probs=164.2

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+..+++.-.+|.|.++.--.-+.+.  ..+.+|+...-.+....+        ...+....|..-++...|+++.....
T Consensus      1227 ~~e~~EV~l~i~~~~~~R~k~Lr~ki--d~Fk~~I~ke~d~e~Lse--------Plkemll~e~de~~~~~h~~~~~~p~ 1296 (2724)
T KOG1826|consen 1227 AMEHSEVNLGISNHFHFRNKWLRSKI--DWFKFSIYKEYDFENLSE--------PLKEMLLSERDELREAKHYLTEVDPL 1296 (2724)
T ss_pred             HhhhhheeeecccceeeccchHhhhh--ceeEEEeehhhhHHHHhh--------HHHHhhhhhhhhhhhhhceeeecccc
Confidence            34566777667766665432222221  235566653333322211        23345556666777788998877666


Q ss_pred             eee--cCCeEEEEEeccCCCChHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-C----CcccCCCCCCeeeccC
Q 014344           94 VLS--TDKFVGYAIDYCPGRDLHSLRKQQSE--QMFSDDTIRFYAAELVLALEYLHNM-G----IVYRDLKPENIMIQEN  164 (426)
Q Consensus        94 ~~~--~~~~~~lV~Ey~~gg~L~~l~~~~~~--~~l~~~~~~~~~~qil~aL~~LH~~-g----iiHrDlKp~NiLl~~~  164 (426)
                      -..  .....|.+++||.+|.+++.+-....  ..+.+.-+.....+.+.+..-+|+. +    .+|++||+-|.+|..+
T Consensus      1297 rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtn 1376 (2724)
T KOG1826|consen 1297 RIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTN 1376 (2724)
T ss_pred             cCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecC
Confidence            553  34567899999999999998654322  2233444444444558888888864 2    6899999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      ..+|++++|+.+...+.                                                        .......
T Consensus      1377 y~v~~gk~gLdKIknp~--------------------------------------------------------~sf~Gl~ 1400 (2724)
T KOG1826|consen 1377 YNVKLGKGGLDKIKNPV--------------------------------------------------------LSFFGLE 1400 (2724)
T ss_pred             CcccccccccccccCch--------------------------------------------------------Hhhhhhh
Confidence            99999999998833211                                                        1123456


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--C-CCCCHHHHHHHHHHhccC
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD--L-VGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~--~-~~~~~~~~~li~~~L~~d  321 (426)
                      ++++.|++|++...-.++.++|+|..|+.+|+...|..+|........ ..++.....  . .-.|.++-.....+|-+.
T Consensus      1401 l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi~flq~~L-kgiidn~tf~sIe~l~pgdaNve~~~~Ll~K 1479 (2724)
T KOG1826|consen 1401 LCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFIFFLQPAL-KGIIDNHTFFSIEKLKPGDANVEALHRLLWK 1479 (2724)
T ss_pred             hCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHHHHHHHHH-cCcccccccccccccCCCcccHHHHHHHHHH
Confidence            788999999999988899889999999999999999887743222111 111111000  0 011233333444555556


Q ss_pred             CCCCCChHHHhcCCCcC
Q 014344          322 PTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       322 P~~R~s~~eil~hp~f~  338 (426)
                      -..||.-..++.-+.|.
T Consensus      1480 ~~~rp~q~isls~d~~a 1496 (2724)
T KOG1826|consen 1480 YMERPGQYISLSRDHFA 1496 (2724)
T ss_pred             hhhcchhhhhccccccc
Confidence            67899888888877764

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.94  E-value=0.00011  Score=67.36  Aligned_cols=140  Identities=19%  Similarity=0.269  Sum_probs=82.4

Q ss_pred             EeeecccCceEEEEEEEcC-CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeeecC
Q 014344           21 VSALGRGAKGVVFLVKDVE-SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLSTD   98 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~   98 (426)
                      ++.|..|-...+|++.... .++.|++|+.....              ...-....|+.+++.+. +...+++++.+.  
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~--------------~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--   66 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT--------------ELIIDRERELRIHKLLSKHGLAPKLYATFQ--   66 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCc--------------cceecHHHHHHHHHHHHhCCCCCeEEEEeC--
Confidence            4677888889999997543 35788999763211              01112345888898885 334556665443  


Q ss_pred             CeEEEEEeccCCCChHH-----------H---HHH---hc-cC--------CCC-HHHHHHHHHH---------------
Q 014344           99 KFVGYAIDYCPGRDLHS-----------L---RKQ---QS-EQ--------MFS-DDTIRFYAAE---------------  136 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L~~-----------l---~~~---~~-~~--------~l~-~~~~~~~~~q---------------  136 (426)
                      +  .++|||++|.++..           +   +.+   .. ..        ... ...+..+...               
T Consensus        67 ~--~~l~e~i~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  144 (235)
T cd05157          67 N--GLIYEFIPGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKT  144 (235)
T ss_pred             C--cEEEEeeCCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhh
Confidence            2  47999999876521           1   110   00 00        011 1222222211               


Q ss_pred             -------HH---HHHH-HHH----HCCCcccCCCCCCeeecc-CCcEEEecccccccC
Q 014344          137 -------LV---LALE-YLH----NMGIVYRDLKPENIMIQE-NGHIMLVDFDLSTKL  178 (426)
Q Consensus       137 -------il---~aL~-~LH----~~giiHrDlKp~NiLl~~-~g~ikL~DFgls~~~  178 (426)
                             +.   ..|. .+-    ..+++|+|+.+.|||++. ++.+.|+||..|..-
T Consensus       145 ~~~~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~  202 (235)
T cd05157         145 KAISFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYN  202 (235)
T ss_pred             ccccHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcC
Confidence                   11   1111 111    136999999999999997 578999999988753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK10593 hypothetical protein; Provisional

Probab=97.84  E-value=0.00034  Score=66.71  Aligned_cols=79  Identities=13%  Similarity=0.106  Sum_probs=56.0

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC---CCcceeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH---PLLPRLRGV   94 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~l~~~   94 (426)
                      ..-.+.||.|..+.||.....  +..+.+|+. +..              .....+..|...|+.|..   -.+++++++
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~--~~~~~~k~~-~~~--------------~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~   78 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDS--QGNPMPLMA-RSF--------------STPGVAQQEAWKLSMLARSGTVRMPTVYGV   78 (297)
T ss_pred             hheeeecCCccceeEEEEEcC--CCCEEEEEe-ccc--------------ccchHHHHHHHHHHHHccCCCCCcCcEEEE
Confidence            445678999999999998642  235677774 210              012367779999999853   468888887


Q ss_pred             eec---CCeEEEEEeccCCCCh
Q 014344           95 LST---DKFVGYAIDYCPGRDL  113 (426)
Q Consensus        95 ~~~---~~~~~lV~Ey~~gg~L  113 (426)
                      +..   .+..+||||+++|.++
T Consensus        79 ~~~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         79 MTHEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             eccCCcCCCeEEEEeccCCEec
Confidence            754   3668999999998764

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.81  E-value=0.00035  Score=67.02  Aligned_cols=147  Identities=16%  Similarity=0.274  Sum_probs=86.8

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC--ccee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL--LPRL   91 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~--iv~l   91 (426)
                      +++...-++.++.|....+|++..  ++..+++|+.....               ....+..|..++..|...+  ++++
T Consensus        20 ~~~~~~~i~~~~~G~~n~~y~v~t--~~~~~vLK~~~~~~---------------~~~~i~~e~~~l~~L~~~g~pvp~~   82 (307)
T TIGR00938        20 DLGELLSLKGIAEGVENSNYLLTT--DVGRYILTLYEKRV---------------KAEELPFFLALTTHLAARGLPVPKP   82 (307)
T ss_pred             CCCCceeccccCCccccceEEEEe--CCCcEEEEEecCCC---------------CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence            334455678888888899999864  34468889863310               1224455777787774322  4454


Q ss_pred             eeee------ecCCeEEEEEeccCCCChH--------HH------HHHhccCCCC--------HHH-----HH-------
Q 014344           92 RGVL------STDKFVGYAIDYCPGRDLH--------SL------RKQQSEQMFS--------DDT-----IR-------  131 (426)
Q Consensus        92 ~~~~------~~~~~~~lV~Ey~~gg~L~--------~l------~~~~~~~~l~--------~~~-----~~-------  131 (426)
                      +..-      ...+..+++++|++|..+.        .+      ++.... .++        ...     ..       
T Consensus        83 i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~-~~~~~~~~~~~~~~w~~~~~~~~~~~~~  161 (307)
T TIGR00938        83 VKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGA-HFPENRKNSLRLEAWHILAEKCFEAAPQ  161 (307)
T ss_pred             ccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhc-cCCCCCCCCCChHHHHHHHHhhhhcccc
Confidence            4421      2245678999999985431        10      111111 010        000     00       


Q ss_pred             ---HHHHHHHHHHHHHHH-------CCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          132 ---FYAAELVLALEYLHN-------MGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       132 ---~~~~qil~aL~~LH~-------~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                         .....+...++++..       .+++|+|+++.||+++.++.+.|+||+.+..-
T Consensus       162 l~~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~  218 (307)
T TIGR00938       162 LEAHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTD  218 (307)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccCc
Confidence               001123334555542       58999999999999998887789999988653

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.80  E-value=2.6e-05  Score=73.12  Aligned_cols=148  Identities=16%  Similarity=0.200  Sum_probs=101.3

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhh-----hcccCCC--chhh--HHHHHHHHHHHhcC-C-C
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-----ELTNNDN--GDKY--RRISFEQRVLRNVE-H-P   86 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~-----~~~~~~~--~~~~--~~~~~E~~il~~l~-h-p   86 (426)
                      +.++..||-|.-+-||.+-+ ..|++.++|+-.....+-++-     .......  ...+  -...+|...|+.|. | -
T Consensus        94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            57889999999999999987 558899999764333221110     0000000  1111  24567999999996 3 2


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      -+++.++    .+..++|||++.|-.|....+-     ..   +..+...++.-+--|-.+|+||+|..-=||+++.++.
T Consensus       173 pVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v-----~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~  240 (465)
T KOG2268|consen  173 PVPKPID----HNRHCVVMELVDGYPLRQVRHV-----ED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDK  240 (465)
T ss_pred             CCCCccc----ccceeeHHHhhcccceeeeeec-----CC---hHHHHHHHHHHHHHHHHcCceecccchheeEEecCCC
Confidence            3445543    4667899999999998765332     12   2233445556667788999999999999999999999


Q ss_pred             EEEecccccccC
Q 014344          167 IMLVDFDLSTKL  178 (426)
Q Consensus       167 ikL~DFgls~~~  178 (426)
                      ++++||.-....
T Consensus       241 i~vIDFPQmvS~  252 (465)
T KOG2268|consen  241 IVVIDFPQMVST  252 (465)
T ss_pred             EEEeechHhhcc
Confidence            999999865443

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.78  E-value=8.2e-05  Score=65.86  Aligned_cols=97  Identities=22%  Similarity=0.252  Sum_probs=77.4

Q ss_pred             HHHHHHhcCC-CCcceeeeeeecCCeEEEEEeccCCCChHHH---HHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CC
Q 014344           76 EQRVLRNVEH-PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL---RKQQSEQMFSDDTIRFYAAELVLALEYLHN---MG  148 (426)
Q Consensus        76 E~~il~~l~h-p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l---~~~~~~~~l~~~~~~~~~~qil~aL~~LH~---~g  148 (426)
                      |.-+|+.+.+ +++++++|++..    ++|.||...+++...   +...  ...++.....++.+++..+++|+.   ..
T Consensus         9 E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~--~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    9 EPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQF--LQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             HHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccc--cccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            7888999976 699999998722    678999987766421   0111  125788888999999999999987   35


Q ss_pred             CcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          149 IVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       149 iiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      +.-.|++|+|+-++++|++|++|.+.+...
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            778899999999999999999999987654

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.72  E-value=0.00032  Score=66.85  Aligned_cols=139  Identities=16%  Similarity=0.230  Sum_probs=84.3

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC--Ccceeeee---
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP--LLPRLRGV---   94 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~---   94 (426)
                      -++.|..|....+|++..  .+..+++|+...                .....+..|+.++..|.+-  .+++++..   
T Consensus        18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~----------------~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g   79 (296)
T cd05153          18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEK----------------VSAEELPFFLALLDHLAERGLPVPRPIADRDG   79 (296)
T ss_pred             heecccCccccceEEEEe--CCCcEEEEEcCC----------------CChHhccHHHHHHHHHHHCCCCCCccccCCCC
Confidence            366788888899999864  345789998732                0123455688888887532  24454432   


Q ss_pred             ---eecCCeEEEEEeccCCCChHH--------H------HHHhccCCCCH--------HHHH------------HHHHHH
Q 014344           95 ---LSTDKFVGYAIDYCPGRDLHS--------L------RKQQSEQMFSD--------DTIR------------FYAAEL  137 (426)
Q Consensus        95 ---~~~~~~~~lV~Ey~~gg~L~~--------l------~~~~~~~~l~~--------~~~~------------~~~~qi  137 (426)
                         ...++..++|+++++|..+..        +      ++..... +..        ....            .....+
T Consensus        80 ~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  158 (296)
T cd05153          80 EYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQS-FPGERNNLRGLAWIRELGKDLLPLLSAEDRALL  158 (296)
T ss_pred             cEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc-CCccCCCcCCcHHHHHHHHHhccccCHHHHHHH
Confidence               233456789999999876421        1      1111000 000        0000            011112


Q ss_pred             HHHHHHHHH-------CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          138 VLALEYLHN-------MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       138 l~aL~~LH~-------~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ..++.++.+       .+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus       159 ~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         159 ADELARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             HHHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            334444443       4799999999999999887789999998865

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.65  E-value=0.00037  Score=66.65  Aligned_cols=140  Identities=19%  Similarity=0.303  Sum_probs=83.2

Q ss_pred             EeeecccCceEEEEEEEcC------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC-CCcceeee
Q 014344           21 VSALGRGAKGVVFLVKDVE------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH-PLLPRLRG   93 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~l~~   93 (426)
                      ++.|..|-...||++....      +++.|++|+.....              ........|..+++.+.. .-.+++++
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~--------------~~~~~r~~E~~~~~~l~~~g~~P~~~~   68 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV--------------ELLIDRERELVVFARLSERNLGPKLYG   68 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC--------------cceechHHHHHHHHHHHhCCCCCceEE
Confidence            4566677777999987543      25789999973321              112245568888888863 23456666


Q ss_pred             eeecCCeEEEEEeccCCCChHHH--------------HHH---hccC-------CCCH--HHHHH---------------
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSL--------------RKQ---QSEQ-------MFSD--DTIRF---------------  132 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l--------------~~~---~~~~-------~l~~--~~~~~---------------  132 (426)
                      ++..    .+|+||++|..+...              +.+   ....       ..+.  ..+..               
T Consensus        69 ~~~~----~~v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (302)
T cd05156          69 IFPN----GRIEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSD  144 (302)
T ss_pred             EeCC----CchhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccc
Confidence            6642    368999988765321              110   0000       0000  01100               


Q ss_pred             -----------HHHHHHHHHHHHHH---------CCCcccCCCCCCeeeccC----CcEEEecccccccC
Q 014344          133 -----------YAAELVLALEYLHN---------MGIVYRDLKPENIMIQEN----GHIMLVDFDLSTKL  178 (426)
Q Consensus       133 -----------~~~qil~aL~~LH~---------~giiHrDlKp~NiLl~~~----g~ikL~DFgls~~~  178 (426)
                                 +..++...+..|-.         ..++|+|+.|.|||++.+    +.+.++||..|..-
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~  214 (302)
T cd05156         145 SEKLLEVELSLFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYN  214 (302)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCC
Confidence                       11222233344432         268999999999999985    88999999998753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.62  E-value=0.0016  Score=64.22  Aligned_cols=84  Identities=17%  Similarity=0.237  Sum_probs=56.2

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCC-chhhHHHHHHHHHHHhcC---CCCcceeeeee
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDN-GDKYRRISFEQRVLRNVE---HPLLPRLRGVL   95 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~-~~~~~~~~~E~~il~~l~---hp~iv~l~~~~   95 (426)
                      -.+.||-|.+..||.+.+...++.++||.-.... ..      .... +....+...|.+.|+.+.   -.++++++.+ 
T Consensus        30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~-r~------~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~-  101 (401)
T PRK09550         30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYV-RV------VGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY-  101 (401)
T ss_pred             eeeEcCCCceEEEEEEEeCCCCeEEEEEecCccc-cc------ccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE-
Confidence            3578999999999999986444689999742110 00      0000 123457777888888864   3467888876 


Q ss_pred             ecCCeEEEEEeccCCCC
Q 014344           96 STDKFVGYAIDYCPGRD  112 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~  112 (426)
                       ++...++||||+++..
T Consensus       102 -D~~~~~lVME~L~~~~  117 (401)
T PRK09550        102 -DEELAVTVMEDLSDHK  117 (401)
T ss_pred             -CCCCCEEEEecCCCcc
Confidence             4466789999998643

>PRK05231 homoserine kinase; Provisional

Probab=97.60  E-value=0.0013  Score=63.32  Aligned_cols=140  Identities=11%  Similarity=0.171  Sum_probs=77.6

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC--Ccceeeee----
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP--LLPRLRGV----   94 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~----   94 (426)
                      ++.|+.|....+|++...  +..+++|++...                ....+..|..+++.|...  .+++++..    
T Consensus        27 ~~~l~~G~~n~~y~v~t~--~g~~vLK~~~~~----------------~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~   88 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTT--QGEYVLTLFERL----------------TAEDLPFFLGLMQHLAARGVPVPAPVARRDGA   88 (319)
T ss_pred             cchhccccccceEEEEeC--CCcEEEEEeccC----------------ChHHhHHHHHHHHHHHHCCCCCCcceeCCCCC
Confidence            456778888899998753  347899987310                112334466666666422  23444421    


Q ss_pred             --eecCCeEEEEEeccCCCChH-----HH------H---HHhccC-------CCCH----HHH-----------HHHHHH
Q 014344           95 --LSTDKFVGYAIDYCPGRDLH-----SL------R---KQQSEQ-------MFSD----DTI-----------RFYAAE  136 (426)
Q Consensus        95 --~~~~~~~~lV~Ey~~gg~L~-----~l------~---~~~~~~-------~l~~----~~~-----------~~~~~q  136 (426)
                        ....+..+++++|++|..+.     .+      +   +.....       ....    ..+           ...+.+
T Consensus        89 ~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  168 (319)
T PRK05231         89 ALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEA  168 (319)
T ss_pred             EeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHH
Confidence              23355678999999986431     11      1   111000       0000    000           011111


Q ss_pred             -HHHHHHHHH-------HCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          137 -LVLALEYLH-------NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       137 -il~aL~~LH-------~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                       +-..++.+.       ..|+||+|++|.|||++.+...-|+||+.+..-
T Consensus       169 ~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~  218 (319)
T PRK05231        169 ELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACND  218 (319)
T ss_pred             HHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccCC
Confidence             111223332       238999999999999986655689999988654

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.59  E-value=0.0012  Score=61.57  Aligned_cols=136  Identities=15%  Similarity=0.162  Sum_probs=78.8

Q ss_pred             eecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC-CcceeeeeeecCCeE
Q 014344           23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP-LLPRLRGVLSTDKFV  101 (426)
Q Consensus        23 ~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~iv~l~~~~~~~~~~  101 (426)
                      .+..|-.+.+|++.  .+++.+++|+.....             ....-....|..+++.+... -.++++....    -
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~-------------~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~   63 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVC-------------KALGVDRQREYQILQALSALGLAPKPILVNE----H   63 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCccc-------------ccccCcHHHHHHHHHHHHhcCCCCceEEEeC----C
Confidence            34567788899887  456788899753211             00001245688999988643 3355555432    2


Q ss_pred             EEEEeccCCCChHH-----------H---HHHhc-----cCCCCH-HHHHHHHHHH---------HHHHHHHHH------
Q 014344          102 GYAIDYCPGRDLHS-----------L---RKQQS-----EQMFSD-DTIRFYAAEL---------VLALEYLHN------  146 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~-----------l---~~~~~-----~~~l~~-~~~~~~~~qi---------l~aL~~LH~------  146 (426)
                      ++||||++|..+..           +   +.+-.     ...++. ..+..+..++         ...+..+-.      
T Consensus        64 ~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  143 (256)
T TIGR02721        64 WLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAP  143 (256)
T ss_pred             EEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCC
Confidence            68999999866531           1   11111     111111 1222322222         111222221      


Q ss_pred             --CCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          147 --MGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       147 --~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                        ..++|+|+.|.||+++.++ +.|+||..+..-
T Consensus       144 ~~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~g  176 (256)
T TIGR02721       144 LPLAPLHMDVHAYNLVVTPQG-LKLIDWEYASDG  176 (256)
T ss_pred             CCCeeecCCCCcCcEEEeCCC-CEEEeccccCcC
Confidence              2589999999999999877 789999988653

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.25  E-value=0.0044  Score=60.06  Aligned_cols=80  Identities=19%  Similarity=0.191  Sum_probs=51.8

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHH-hhhhhcccCCCchhhHHHHHHHHHHHhcC--CC-Ccceeeeeeec
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIE-KKSKELTNNDNGDKYRRISFEQRVLRNVE--HP-LLPRLRGVLST   97 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp-~iv~l~~~~~~   97 (426)
                      +.||-|....||++.+...++.++||--..-.-. ..       .-+-...+...|...|+...  -| .+++++.+  +
T Consensus         1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~-------~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D   71 (370)
T TIGR01767         1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGE-------SWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--D   71 (370)
T ss_pred             CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCC-------CCCCCccHHHHHHHHHHHhhccCccccCeEEEE--c
Confidence            3579999999999998544468999964221110 01       11223456778888998875  34 56666553  5


Q ss_pred             CCeEEEEEeccCC
Q 014344           98 DKFVGYAIDYCPG  110 (426)
Q Consensus        98 ~~~~~lV~Ey~~g  110 (426)
                      +....+|||+++.
T Consensus        72 ~e~~~~vMEdL~~   84 (370)
T TIGR01767        72 TEMAVTVMEDLSH   84 (370)
T ss_pred             cccceehHhhCcc
Confidence            6666799999954

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.23  E-value=0.0031  Score=59.46  Aligned_cols=31  Identities=29%  Similarity=0.423  Sum_probs=26.1

Q ss_pred             CCcccCCCCCCeeeccCCc-EEEecccccccC
Q 014344          148 GIVYRDLKPENIMIQENGH-IMLVDFDLSTKL  178 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~-ikL~DFgls~~~  178 (426)
                      .++|+|++|.|||++.++. .-|+||+.+..-
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            4899999999999997565 569999988753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.19  E-value=0.0056  Score=58.67  Aligned_cols=30  Identities=27%  Similarity=0.555  Sum_probs=26.4

Q ss_pred             CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          147 MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      .+++|+|+.+.||+++. +.+.|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            47899999999999987 6789999997654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.07  E-value=0.0058  Score=59.26  Aligned_cols=147  Identities=17%  Similarity=0.215  Sum_probs=83.9

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCC---CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc-
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVES---SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL-   88 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-   88 (426)
                      ++.+..++....| |=...+|++.....   +..|.+|+.....              +..-.-.+|..+++.+..-++ 
T Consensus        12 ~~~~~i~i~~l~g-GlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t--------------~~~IdR~~E~~il~~l~~~gl~   76 (330)
T PLN02421         12 LDDSDFSVERISG-GITNLLLKVSVKEENGNEVSVTVRLFGPNT--------------DYVIDRERELQAIKYLSAAGFG   76 (330)
T ss_pred             CCcCceEEEEeCC-cccceEEEEEecCCCCCCceEEEEEecCCc--------------CeEechHHHHHHHHHHHhcCCC
Confidence            3455666665544 77778998865332   3478999873211              111123458889998865444 


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHH--------------HHHHhccCCC-------CHHHHHHHHHHH----------
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHS--------------LRKQQSEQMF-------SDDTIRFYAAEL----------  137 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~--------------l~~~~~~~~l-------~~~~~~~~~~qi----------  137 (426)
                      +++++++.. +   +|.+|++|..|..              .+++.....+       ....+..+..++          
T Consensus        77 P~~l~~~~~-G---~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~  152 (330)
T PLN02421         77 AKLLGVFGN-G---MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEK  152 (330)
T ss_pred             CceeEEeCC-c---EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHH
Confidence            567766632 2   5899998766521              1111111111       122333333222          


Q ss_pred             ------------HHHHHHHH----HC----CCcccCCCCCCeeecc-CCcEEEecccccccC
Q 014344          138 ------------VLALEYLH----NM----GIVYRDLKPENIMIQE-NGHIMLVDFDLSTKL  178 (426)
Q Consensus       138 ------------l~aL~~LH----~~----giiHrDlKp~NiLl~~-~g~ikL~DFgls~~~  178 (426)
                                  ..-+..+.    ..    -++|.|+.+.|||++. ++.++++||..|..-
T Consensus       153 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n  214 (330)
T PLN02421        153 QKKYETISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS  214 (330)
T ss_pred             hhhhcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence                        11122222    11    2799999999999975 578999999988653

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.06  E-value=0.0016  Score=64.89  Aligned_cols=77  Identities=22%  Similarity=0.240  Sum_probs=58.7

Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCC----------CCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----------VGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       264 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~~~----------~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      ++||||+|.++.++..|...+......+....+..-   +...          ...+..+.++..+|+...|..||...+
T Consensus       111 KsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~  190 (725)
T KOG1093|consen  111 KSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPME  190 (725)
T ss_pred             chhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhH
Confidence            899999999999999999888776655554444321   1111          122445678999999999999999999


Q ss_pred             HhcCCCcCCC
Q 014344          331 IKGHEFFKGV  340 (426)
Q Consensus       331 il~hp~f~~~  340 (426)
                      +.+|+-|.++
T Consensus       191 ~~k~~i~~ev  200 (725)
T KOG1093|consen  191 LSKRCSFTEV  200 (725)
T ss_pred             HhcCccHHHH
Confidence            9999999765

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.04  E-value=0.0067  Score=59.55  Aligned_cols=82  Identities=21%  Similarity=0.186  Sum_probs=55.2

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--CC-Ccceeeeeee
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--HP-LLPRLRGVLS   96 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp-~iv~l~~~~~   96 (426)
                      .++.||-|.-..||++.+...++.++||--..-.-...       .-+-...+...|..+|+.+.  .| ++++++.+  
T Consensus        33 ~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~-------swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--  103 (409)
T PRK12396         33 QCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISD-------EFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--  103 (409)
T ss_pred             eeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCC-------CCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--
Confidence            37889999999999999844456788885422111101       11234567888999999875  34 56667653  


Q ss_pred             cCCeEEEEEeccCC
Q 014344           97 TDKFVGYAIDYCPG  110 (426)
Q Consensus        97 ~~~~~~lV~Ey~~g  110 (426)
                      ++....+|||+++.
T Consensus       104 D~e~~~~vMEdL~~  117 (409)
T PRK12396        104 DSVMNCCVMEDLSD  117 (409)
T ss_pred             CcHHhhHHHHhCcc
Confidence            56667789999853

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.03  E-value=0.003  Score=60.56  Aligned_cols=153  Identities=19%  Similarity=0.260  Sum_probs=99.4

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhh-----------cccCCCchhhHH--HHHHHHHHHhcCCC
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE-----------LTNNDNGDKYRR--ISFEQRVLRNVEHP   86 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~-----------~~~~~~~~~~~~--~~~E~~il~~l~hp   86 (426)
                      |-..|..|--+.||.|.. .+|..+|||++.-+.+.-+-+.           .-...++...-.  ...|++-|.+|..-
T Consensus       148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            445677899999999886 5677899999864433211111           111223333323  34477788888755


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCCeeeccCC
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH-NMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH-~~giiHrDlKp~NiLl~~~g  165 (426)
                      .|+..--.. - ....|||+++. .+=+-.- ......++...++.+-.|++.-+.-|- ..++||.||.-=|+|+ .+|
T Consensus       227 GIP~PePIl-L-k~hVLVM~FlG-rdgw~aP-kLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG  301 (520)
T KOG2270|consen  227 GIPCPEPIL-L-KNHVLVMEFLG-RDGWAAP-KLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDG  301 (520)
T ss_pred             CCCCCCcee-e-ecceEeeeecc-CCCCcCc-ccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECC
Confidence            544321111 1 23469999995 3322211 112334888889998889998888885 5799999999999998 478


Q ss_pred             cEEEecccccccC
Q 014344          166 HIMLVDFDLSTKL  178 (426)
Q Consensus       166 ~ikL~DFgls~~~  178 (426)
                      .+.++|.+-+...
T Consensus       302 ~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  302 KLYIIDVSQSVEH  314 (520)
T ss_pred             EEEEEEccccccC
Confidence            9999999877654

>PLN02236 choline kinase

Probab=97.00  E-value=0.0051  Score=59.98  Aligned_cols=146  Identities=19%  Similarity=0.258  Sum_probs=84.3

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcC----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC-Cc
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVE----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP-LL   88 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp-~i   88 (426)
                      +.+...+. .|-.|-...+|++....    .++.|.+|+.....             ..... -..|..+++.+..- --
T Consensus        35 ~~~~~~i~-~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t-------------~~~id-R~~E~~~~~~l~~~gl~   99 (344)
T PLN02236         35 DDEALQVI-PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV-------------ELFFD-RDDEIRTFECMSRHGQG   99 (344)
T ss_pred             CcCcEEEE-EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC-------------Ceeec-hHHHHHHHHHHHHcCCC
Confidence            33444444 45458888999987432    34689999873321             11122 25688999988643 34


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHH--------------HHHhccC-------CCCHHHHHHHHHHH----------
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSL--------------RKQQSEQ-------MFSDDTIRFYAAEL----------  137 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l--------------~~~~~~~-------~l~~~~~~~~~~qi----------  137 (426)
                      +++++.+...    .|.+|++|.+|..-              +.+....       ......+..+..++          
T Consensus       100 P~~~~~~~~g----~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~  175 (344)
T PLN02236        100 PRLLGRFPNG----RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAK  175 (344)
T ss_pred             CceEEEECCc----eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhh
Confidence            4677766432    58999987665311              1111000       11123333333222          


Q ss_pred             -------HHHHHHH----H----HCCCcccCCCCCCeeecc-CCcEEEecccccccC
Q 014344          138 -------VLALEYL----H----NMGIVYRDLKPENIMIQE-NGHIMLVDFDLSTKL  178 (426)
Q Consensus       138 -------l~aL~~L----H----~~giiHrDlKp~NiLl~~-~g~ikL~DFgls~~~  178 (426)
                             ...+..|    .    ...++|+|+++.|||+++ ++.+.|+||..+..-
T Consensus       176 ~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~  232 (344)
T PLN02236        176 EFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN  232 (344)
T ss_pred             hcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence                   1111122    1    236899999999999986 478999999988753

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.71  E-value=0.012  Score=56.09  Aligned_cols=150  Identities=18%  Similarity=0.238  Sum_probs=87.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC--CCcceeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH--PLLPRLRG   93 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~iv~l~~   93 (426)
                      ....+++.+-.|....+|...+.  ++.+++..-....            .........+|..+|+.+.-  .-++..++
T Consensus        25 ~~~~~v~~~~~G~sn~t~~~~~~--~~~~vlR~P~~~~------------~~~~~~~~~re~~~i~~l~~~~vP~p~~~~   90 (321)
T COG3173          25 AGLLIVEEISGGWSNDTFRLGDT--GQKYVLRKPPRGD------------PVESAHDEKREYRVIAALLDVDVPVPRAFG   90 (321)
T ss_pred             CCCceeeeccCCcccceEEEecC--CceEEEecCCccc------------cchhhhHHHhHHHHHHHhcCCCCCCccccc
Confidence            44566667655655666666644  7788888221111            11234455668888888754  23445555


Q ss_pred             eeecCC--eEEEEEeccCCCChHH----------H--------HHHh------c----c--CCCCHHHHHHHHHHH----
Q 014344           94 VLSTDK--FVGYAIDYCPGRDLHS----------L--------RKQQ------S----E--QMFSDDTIRFYAAEL----  137 (426)
Q Consensus        94 ~~~~~~--~~~lV~Ey~~gg~L~~----------l--------~~~~------~----~--~~l~~~~~~~~~~qi----  137 (426)
                      .+.++.  ..|.||+|++|..+.+          +        +..-      .    .  ..+....+..+..+.    
T Consensus        91 ~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~  170 (321)
T COG3173          91 LCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAK  170 (321)
T ss_pred             ccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHH
Confidence            555554  6799999999732211          1        1100      0    0  001122222222232    


Q ss_pred             ----------HHHHHHHHHC--------CCcccCCCCCCeeeccCCcEEEecccccccCC
Q 014344          138 ----------VLALEYLHNM--------GIVYRDLKPENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       138 ----------l~aL~~LH~~--------giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                                ..-..+|+.+        .++|+|+++.||+++..+-+-+.||+++..-.
T Consensus       171 ~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         171 KELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD  230 (321)
T ss_pred             HhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence                      2224555543        48999999999999999899999999987643

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.48  E-value=0.0055  Score=55.25  Aligned_cols=30  Identities=33%  Similarity=0.655  Sum_probs=21.9

Q ss_pred             CCcccCCCCCCeee-ccCCcEEEeccccccc
Q 014344          148 GIVYRDLKPENIMI-QENGHIMLVDFDLSTK  177 (426)
Q Consensus       148 giiHrDlKp~NiLl-~~~g~ikL~DFgls~~  177 (426)
                      .++|.||.|.|||+ +.++.++|+||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            58999999999999 8889999999998865

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.42  E-value=0.043  Score=51.97  Aligned_cols=76  Identities=11%  Similarity=0.079  Sum_probs=49.0

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC---CCCcceeeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE---HPLLPRLRGV   94 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~l~~~   94 (426)
                      .+-.+.|+-|....+|.+.  .+++.+-+|+-..                .....+..|..-|+.|.   --.+++++.+
T Consensus        19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~----------------~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~   80 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSE----------------SGRDMFEGEAEGLKALAEANPIRVPKVIAW   80 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEG----------------GGCCHHHHHHHHHHHHCHTTTSBS--EEEE
T ss_pred             eeeeEecCCCChhheEEEE--CCCccEEEEecCh----------------hhHHHHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence            3456778889999999988  6788999998642                12346777888888884   3468889998


Q ss_pred             eecCCeEEEEEeccCCC
Q 014344           95 LSTDKFVGYAIDYCPGR  111 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg  111 (426)
                      ...++.-||||||++.+
T Consensus        81 G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   81 GEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EE-SSCCEEEEE-----
T ss_pred             EeecCCceEEEEeecCC
Confidence            88777789999999866

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.38  E-value=0.037  Score=53.09  Aligned_cols=31  Identities=13%  Similarity=0.189  Sum_probs=28.5

Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      ++||+|+.+.|+|++.++.+.++||..+..-
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d  227 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASFA  227 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcccC
Confidence            7999999999999999999999999988753

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.22  E-value=0.074  Score=52.61  Aligned_cols=80  Identities=20%  Similarity=0.210  Sum_probs=52.7

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhH-HhhhhhcccCCCchhhHHHHHHHHHHHhcC---CCCcceeeeee
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLI-EKKSKELTNNDNGDKYRRISFEQRVLRNVE---HPLLPRLRGVL   95 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~l~~~~   95 (426)
                      -.+.||-|....||++.+.  ++.++||.-..... ...+       =+....+...|...|+.+.   ..++++++.+.
T Consensus        36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~-------wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~d  106 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGES-------WPMTKERAYFEATALREHGRLCPDHVPEVYHFD  106 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCcc-------ccCCccHHHHHHHHHHHhhhcCCCCCCeEEEEC
Confidence            4788999999999999873  45688987532110 0000       0012445666778887764   24788888876


Q ss_pred             ecCCeEEEEEeccCC
Q 014344           96 STDKFVGYAIDYCPG  110 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~g  110 (426)
                      .  +..+++|||+++
T Consensus       107 e--d~~vlvME~L~~  119 (418)
T PLN02756        107 R--TMALIGMRYLEP  119 (418)
T ss_pred             C--CCCEEEEeecCC
Confidence            5  446788999976

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.06  E-value=0.018  Score=55.33  Aligned_cols=73  Identities=21%  Similarity=0.274  Sum_probs=56.4

Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ...+.|++|++- |+.+.. +..     -..+++..++.+.+..+.-+..+ .+-|||+...||||+ +|.|.|+||-+|
T Consensus       297 e~~y~yl~~kdh-gt~is~-ik~-----~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfkls  368 (488)
T COG5072         297 ETLYLYLHFKDH-GTPISI-IKA-----DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLS  368 (488)
T ss_pred             CceEEEEEEecC-Cceeee-eec-----ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeee
Confidence            345778888875 566543 221     33567778888888887777754 789999999999999 999999999999


Q ss_pred             cc
Q 014344          176 TK  177 (426)
Q Consensus       176 ~~  177 (426)
                      +.
T Consensus       369 Rl  370 (488)
T COG5072         369 RL  370 (488)
T ss_pred             ec
Confidence            84

>PTZ00384 choline kinase; Provisional

Probab=95.95  E-value=0.098  Score=51.68  Aligned_cols=82  Identities=10%  Similarity=0.160  Sum_probs=48.2

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCC-Cce-----EEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC-C
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVES-SES-----FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH-P   86 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~-~~~-----vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p   86 (426)
                      +.+..++. .|..|-...+|++..... +..     |.+++...              .....-.-..|..+++.|.. .
T Consensus        49 ~~~~i~i~-~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~--------------~~~l~IdR~~E~~i~~~Ls~~g  113 (383)
T PTZ00384         49 NPEFIEIK-KMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSST--------------YNSLVIDNDLQYNIAKLLGDNN  113 (383)
T ss_pred             CcccEEEE-EeCCcccceEEEEEecCCCCCccccceEEEEeccC--------------CCceEeccHHHHHHHHHHHhCC
Confidence            44445554 555588889999875432 223     33333200              01111123458899999974 4


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChH
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLH  114 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~  114 (426)
                      .=+++++.|..    +++.||++|.+|.
T Consensus       114 lgP~l~~~f~~----g~l~efIeGr~l~  137 (383)
T PTZ00384        114 FGPKIIGRFGD----FTIQEWVEGNTMG  137 (383)
T ss_pred             CCCeEEEecCC----EEEEEEeccccCC
Confidence            45677777743    6999999987663

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.63  E-value=0.043  Score=53.57  Aligned_cols=61  Identities=23%  Similarity=0.145  Sum_probs=45.4

Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCCeeecc
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH-NMGIVYRDLKPENIMIQE  163 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH-~~giiHrDlKp~NiLl~~  163 (426)
                      ...++-+|..|.++..+++...   .++...+.++.-...||-.+- -.+++|.|++|.||++.-
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF  380 (565)
T ss_pred             cceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence            3457778999999988876533   566677777776667764443 468999999999999963

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=95.61  E-value=0.052  Score=48.74  Aligned_cols=84  Identities=24%  Similarity=0.279  Sum_probs=57.5

Q ss_pred             HHHHHHHHHhcCCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH--CCCc
Q 014344           73 ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN--MGIV  150 (426)
Q Consensus        73 ~~~E~~il~~l~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~--~gii  150 (426)
                      +..+.+++.++.  .|+++..-  +.-.+.+++|+|......          +    .-++.+ =+.+|.-.|+  .+.+
T Consensus       105 y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i~----------~----~N~i~a-gi~~L~~fH~~~~~~l  165 (308)
T PF07387_consen  105 YFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKIN----------F----SNFITA-GIKDLMDFHSENQHCL  165 (308)
T ss_pred             hhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCcccc----------h----hHHHHH-hHHHHHHhhccCCCee
Confidence            455778887764  57777632  334577999999522110          1    111221 2467788894  4899


Q ss_pred             ccCCCCCCeeeccCCcEEEeccccc
Q 014344          151 YRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus       151 HrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      |+|-.|+|||-|..|.+||.|=+..
T Consensus       166 HGD~np~NiM~D~~G~lKlVDP~~L  190 (308)
T PF07387_consen  166 HGDCNPDNIMCDKFGYLKLVDPVCL  190 (308)
T ss_pred             cCCCChhheeecCCCCEEecChhhh
Confidence            9999999999999999999997743

The function of this family is unknown.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=95.55  E-value=0.28  Score=47.43  Aligned_cols=30  Identities=23%  Similarity=0.227  Sum_probs=25.3

Q ss_pred             CCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          147 MGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      .++||+|+.+.|||++ + .+.|+||+.+..-
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~g  225 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARMG  225 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCCCC
Confidence            3789999999999995 4 5789999988753

>PRK06148 hypothetical protein; Provisional

Probab=95.54  E-value=0.24  Score=55.33  Aligned_cols=32  Identities=22%  Similarity=0.407  Sum_probs=27.2

Q ss_pred             CCCcccCCCCCCeeeccCC--cEE-EecccccccC
Q 014344          147 MGIVYRDLKPENIMIQENG--HIM-LVDFDLSTKL  178 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~g--~ik-L~DFgls~~~  178 (426)
                      .++||+|+.+.|||++.++  .+. |+|||.+..-
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~  237 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVHA  237 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccccc
Confidence            4799999999999999875  565 9999988653

>PTZ00296 choline kinase; Provisional

Probab=94.93  E-value=0.23  Score=50.03  Aligned_cols=81  Identities=19%  Similarity=0.194  Sum_probs=49.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcC--------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVE--------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~--------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      +.++. -++.|..|-.-.+|++....        .++.|.+++.-...              ...-.-..|..+++.+..
T Consensus       104 ~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t--------------e~lIdR~~E~~v~~~ls~  168 (442)
T PTZ00296        104 TEDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV--------------DELYNPISEFEVYKTMSK  168 (442)
T ss_pred             CcccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc--------------cceeCHHHHHHHHHHHHH
Confidence            34455 56667777778889887542        14678999873211              111123447788888764


Q ss_pred             CCc-ceeeeeeecCCeEEEEEeccCCCCh
Q 014344           86 PLL-PRLRGVLSTDKFVGYAIDYCPGRDL  113 (426)
Q Consensus        86 p~i-v~l~~~~~~~~~~~lV~Ey~~gg~L  113 (426)
                      -+| +++++.|.    -+.|.+|++|.+|
T Consensus       169 ~gi~P~l~~~f~----gg~I~efi~g~~l  193 (442)
T PTZ00296        169 YRIAPQLLNTFS----GGRIEEWLYGDPL  193 (442)
T ss_pred             CCCCCceEEEeC----CCEEEEeeCCccC
Confidence            444 35666653    2467899988644

>PHA03111 Ser/Thr kinase; Provisional

Probab=94.28  E-value=0.078  Score=50.38  Aligned_cols=52  Identities=29%  Similarity=0.410  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHH----CCCcccCCCCCCeeeccCC------------------cEEEecccccccC
Q 014344          127 DDTIRFYAAELVLALEYLHN----MGIVYRDLKPENIMIQENG------------------HIMLVDFDLSTKL  178 (426)
Q Consensus       127 ~~~~~~~~~qil~aL~~LH~----~giiHrDlKp~NiLl~~~g------------------~ikL~DFgls~~~  178 (426)
                      .+-+++++.||+.-.-.+-+    .+++|-||||+|||+-...                  ..+|.||.+|..-
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~  351 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVA  351 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHc
Confidence            45678888888776544433    3699999999999984322                  3567888887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	426
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-35
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		4e-35
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-33
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-30
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-30
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-30
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-30
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-30
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-30
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-30
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-30
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-30
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-30
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-30
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-30
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		7e-28
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-28
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-27
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		1e-27
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-27
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		7e-26
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-25
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-25
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-25
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-25
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-25
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-25
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-25
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-25
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-25
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-25
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-25
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		4e-25
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-24
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		4e-24
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		7e-24
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-23
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-23
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-23
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-23
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-23
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-23
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		3e-23
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		9e-23
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-22
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-22
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-22
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		3e-22
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-22
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		8e-22
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-21
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-21
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-20
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-19
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-19
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		3e-19
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		3e-19
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-19
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-19
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		7e-19
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		3e-18
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-18
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-17
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		8e-17
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-15
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-15
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-15
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-15
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-15
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-15
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-15
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-15
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-15
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-15
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-15
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		3e-15
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-15
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		3e-15
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-15
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-15
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-15
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		4e-15
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-15
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		4e-15
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-15
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-15
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-15
4ae9_A	343	Structure And Function Of The Human Sperm-specific		4e-15
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-15
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		4e-15
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-15
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-15
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-15
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-15
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		4e-15
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-15
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-15
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-15
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-15
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-15
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		4e-15
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		4e-15
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-15
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-15
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-15
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-15
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		4e-15
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-15
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-15
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-15
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-15
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-15
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-15
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-15
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-15
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-15
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-15
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		4e-15
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		5e-15
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		5e-15
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		5e-15
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-15
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-15
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-15
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		6e-15
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		6e-15
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-15
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		7e-15
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		9e-15
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		9e-15
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-15
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-14
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		1e-14
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-14
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-14
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-14
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-14
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-14
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-14
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		6e-14
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		8e-14
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		9e-14
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-13
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-13
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-13
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-13
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		3e-13
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-13
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-13
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-13
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-13
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-13
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-13
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		7e-13
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-13
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-13
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		7e-13
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-13
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-13
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-13
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-13
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-13
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-13
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		3e-13
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-13
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-13
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-13
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		4e-13
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		7e-13
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		4e-13
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		7e-13
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-13
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-13
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-13
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		5e-13
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		5e-13
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		5e-13
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		5e-13
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		5e-13
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		5e-13
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		5e-13
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		5e-13
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		5e-13
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		5e-13
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		6e-13
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		6e-13
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		8e-13
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		9e-13
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-12
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-12
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-12
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-12
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-12
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-12
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-12
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-12
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-12
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-12
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		3e-12
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		4e-12
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		4e-12
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		6e-12
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		6e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		8e-12
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		8e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		9e-12
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-11
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-11
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-11
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-11
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-11
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-11
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-11
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-11
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-11
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		4e-11
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		4e-11
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		4e-11
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		4e-11
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		4e-11
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		4e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		4e-11
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		5e-11
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		5e-11
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		5e-11
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		5e-11
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		5e-11
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		5e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		5e-11
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		5e-11
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		5e-11
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		5e-11
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		6e-11
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		6e-11
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		9e-11
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-10
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-10
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-10
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-10
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-10
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-10
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-10
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-10
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-10
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-10
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-10
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-10
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-10
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-10
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-10
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-10
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-10
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-10
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-10
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-10
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-10
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		3e-10
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-10
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		3e-10
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-10
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-10
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-10
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-10
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-10
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-10
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		6e-10
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		7e-10
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		8e-10
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		8e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		8e-10
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		9e-10
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		9e-10
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		9e-10
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-09
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-09
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-09
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-09
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-09
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-09
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-09
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-09
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-09
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-09
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-09
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-09
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-09
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-09
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-09
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-09
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-09
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-09
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-09
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-09
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-09
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-09
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-09
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-09
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-09
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		3e-09
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-09
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-09
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		4e-09
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-09
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		6e-09
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		6e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-09
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		7e-09
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		9e-09
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-08
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-08
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-08
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-08
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-08
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-08
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-08
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-08
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		5e-07
3soa_A	444	Full-Length Human Camkii Length = 444		2e-08
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-08
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-08
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-08
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		5e-08
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		5e-08
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		6e-08
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		7e-08
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-08
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		7e-08
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		7e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		8e-08
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		8e-08
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		8e-08
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		8e-08
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		8e-08
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		9e-08
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		9e-08
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		9e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-07
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-07
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-07
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-07
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-07
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-07
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-07
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		1e-07
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-07
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-07
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-07
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-07
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-07
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-07
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-07
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-07
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-07
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-07
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-07
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-07
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-07
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-07
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-07
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-07
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-07
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-07
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-07
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-07
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-07
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-07
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-07
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-07
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-07
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		3e-07
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-07
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-07
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-07
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		3e-07
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-07
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-07
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		3e-07
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-07
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-07
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		3e-07
2oza_A	356	Structure Of P38alpha Complex Length = 356		3e-07
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-07
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		4e-07
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		4e-07
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		4e-07
3a7f_A	303	Human Mst3 Kinase Length = 303		4e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		5e-07
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		5e-07
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		5e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-07
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-07
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-07
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		6e-07
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		6e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		7e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		7e-07
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		8e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		9e-07
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		9e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-06
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		1e-06
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-04
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		2e-06
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-06
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		8e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-06
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-06
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-06
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-06
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-06
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-06
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-06
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-06
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		3e-06
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-06
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-06
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		4e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		7e-06
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		7e-06
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		8e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		8e-06
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		8e-06
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		8e-06
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		9e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		9e-06
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		9e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		9e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		9e-06
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		9e-06
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-05
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-05
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		1e-05
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		1e-05
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-05
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		1e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		1e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-05
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		1e-05
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		1e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		1e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-05
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		1e-05
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-05
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-05
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-05
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-05
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-05
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-05
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-05
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-05
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-05
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-05
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-05
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		2e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		3e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-05
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		3e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-05
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		3e-05
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		3e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-05
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-05
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		4e-05
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-05
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		4e-05
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		4e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		4e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		4e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		5e-05
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		5e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		5e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		5e-05
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		6e-05
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		6e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		6e-05
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-05
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		7e-05
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		7e-05
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		7e-05
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		7e-05
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		7e-05
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		8e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		8e-05
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		8e-05
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		8e-05
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		8e-05
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		8e-05
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		8e-05
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		6e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		9e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		9e-05
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		9e-05
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		6e-04
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		9e-05
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		9e-05
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		7e-04
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		9e-05
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		9e-05
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		6e-04
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		1e-04
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		7e-04
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-04
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		7e-04
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-04
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-04
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		1e-04
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-04
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		2e-04
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-04
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-04
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		2e-04
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		2e-04
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-04
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		3e-04
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		3e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-04
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-04
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-04
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		4e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-04
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		5e-04
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		5e-04
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		5e-04
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		5e-04
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		6e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		6e-04
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		6e-04
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		6e-04
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		7e-04
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		7e-04
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		7e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		7e-04
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		7e-04
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		7e-04
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		7e-04
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		7e-04
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		7e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		7e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		7e-04
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		7e-04
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		7e-04
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		7e-04
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		7e-04
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		7e-04
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		7e-04
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		7e-04
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		8e-04
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		7e-04
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		7e-04
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		8e-04
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		8e-04
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		8e-04
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		8e-04
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		8e-04
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		8e-04
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		8e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		8e-04
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		8e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		8e-04
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		8e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		8e-04
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		9e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		9e-04
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-04
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		9e-04
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		9e-04

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 159/356 (44%), Gaps = 85/356 (23%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKY 70
           D S   ++  LG+G+ G VFLVK +  S++   +A+KV+ +  ++ + +           
Sbjct: 22  DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR----------- 70
Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
            R   E+ +L  V HP + +L     T+  +   +D+  G DL +  +   E MF+++ +
Sbjct: 71  VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT--RLSKEVMFTEEDV 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           +F            H++GI+YRDLKPENI++ E GHI                       
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI----------------------- 165
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                            K    G+S E   H                      F GT EY
Sbjct: 166 -----------------KLTDFGLSKESIDHEKKAYS----------------FCGTVEY 192
Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL 310
           +APE++  +GH  + DWWS GV++ EML G  PF+G  RKET   IL      +G P  L
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK---LGMPQFL 249
Query: 311 ----RNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPNIPA 356
               ++L+R L +++P  R+     GVEEIK H FF  ++W  L +    PP  PA
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPA 305

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 160/351 (45%), Gaps = 81/351 (23%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L+++   G+G+ G V L +       +A+KV+ +  I KK +E          + I
Sbjct: 39  DFHFLKVI---GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEE----------KHI 85
Query: 74  SFEQRV-LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
             E+ V L+NV+HP L  L     T   + + +DY  G +L      Q E+ F +   RF
Sbjct: 86  MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARF 143
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                       H++ IVYRDLKPENI++   GHI+L DF L             K  + 
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC------------KENIE 191
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
            N+ +         S FC                                   GT EY+A
Sbjct: 192 HNSTT---------STFC-----------------------------------GTPEYLA 207
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT-PLR 311
           PE++  + +D  VDWW LG VL+EMLYG  PF   +  E +  IL +P  L    T   R
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSAR 267
Query: 312 NLIRRLLEKDPTKRIGVE----EIKGHEFFKGVNWELLL--KISRP--PNI 354
           +L+  LL+KD TKR+G +    EIK H FF  +NW+ L+  KI+ P  PN+
Sbjct: 268 HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNV 318

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 169/356 (47%), Gaps = 86/356 (24%)
Query: 20  IVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
           ++  LG GA G VFLV+ +   ++   +A+KV+ +  I +K+K   +            E
Sbjct: 58  LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT---------E 108
Query: 77  QRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++VL ++ + P L  L     T+  +   +DY  G +L +   Q+  + F++  ++    
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVG 166
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                    H +GI+YRD+K ENI++  NGH++L DF LS            K  +A  T
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS------------KEFVADET 214
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
                  R++   FC                                   GT EY+AP+I
Sbjct: 215 ------ERAY--DFC-----------------------------------GTIEYMAPDI 231
Query: 256 IEG--KGHDFAVDWWSLGVVLHEMLYGATPF----RGSSRKETFYRILCRPPDLVGEPTP 309
           + G   GHD AVDWWSLGV+++E+L GA+PF      +S+ E   RIL   P    E + 
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 291
Query: 310 L-RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLLKISRPPNIPARFE 359
           L ++LI+RLL KDP KR+G      +EIK H FF+ +NW+ L        +PA F+
Sbjct: 292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDL----AAKKVPAPFK 343

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 151/349 (43%), Gaps = 78/349 (22%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L++   LG+G  G V LV++  +   +A+K++ +++I  K          D+    
Sbjct: 9   DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 55
Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
             E RVL+N  HP L  L+    T   + + ++Y  G +L        E++F+++  RF 
Sbjct: 56  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 113
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +VYRD+K EN+M+ ++GHI + DF L                   
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 154
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
                           C  GIS                            F GT EY+AP
Sbjct: 155 ----------------CKEGIS---------------------DGATMKTFCGTPEYLAP 177
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
           E++E   +  AVDWW LGVV++EM+ G  PF     +  F  IL          +P  ++
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 237
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+  LL+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 238 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 286

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 151/349 (43%), Gaps = 78/349 (22%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L++   LG+G  G V LV++  +   +A+K++ +++I  K          D+    
Sbjct: 6   DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
             E RVL+N  HP L  L+    T   + + ++Y  G +L        E++F+++  RF 
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +VYRD+K EN+M+ ++GHI + DF L                   
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
                           C  GIS                            F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKTFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
           E++E   +  AVDWW LGVV++EM+ G  PF     +  F  IL          +P  ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+  LL+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 151/349 (43%), Gaps = 78/349 (22%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L++   LG+G  G V LV++  +   +A+K++ +++I  K          D+    
Sbjct: 6   DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
             E RVL+N  HP L  L+    T   + + ++Y  G +L        E++F+++  RF 
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +VYRD+K EN+M+ ++GHI + DF L                   
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
                           C  GIS                            F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKTFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
           E++E   +  AVDWW LGVV++EM+ G  PF     +  F  IL          +P  ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+  LL+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 78/349 (22%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L++   LG+G  G V LV++  +   +A+K++ +++I  K          D+    
Sbjct: 6   DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
             E RVL+N  HP L  L+    T   + + ++Y  G +L        E++F+++  RF 
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +VYRD+K EN+M+ ++GHI + DF L                   
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
                           C  GIS                            F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKXFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
           E++E   +  AVDWW LGVV++EM+ G  PF     +  F  IL          +P  ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+  LL+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 78/349 (22%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L++   LG+G  G V LV++  +   +A+K++ +++I  K          D+    
Sbjct: 6   DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
             E RVL+N  HP L  L+    T   + + ++Y  G +L        E++F+++  RF 
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +VYRD+K EN+M+ ++GHI + DF L                   
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
                           C  GIS                            F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKXFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
           E++E   +  AVDWW LGVV++EM+ G  PF     +  F  IL          +P  ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+  LL+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 78/349 (22%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L++   LG+G  G V LV++  +   +A+K++ +++I  K          D+    
Sbjct: 11  DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 57
Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
             E RVL+N  HP L  L+    T   + + ++Y  G +L        E++F+++  RF 
Sbjct: 58  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 115
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +VYRD+K EN+M+ ++GHI + DF L                   
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 156
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
                           C  GIS                            F GT EY+AP
Sbjct: 157 ----------------CKEGIS---------------------DGATMKXFCGTPEYLAP 179
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
           E++E   +  AVDWW LGVV++EM+ G  PF     +  F  IL          +P  ++
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 239
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+  LL+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 288

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 158/374 (42%), Gaps = 84/374 (22%)
Query: 8   RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG 67
           +P   +  +    +  LG+G  G V LVK+  +   +A+K++ +++I  K          
Sbjct: 140 KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---------- 189
Query: 68  DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
           D+      E RVL+N  HP L  L+    T   + + ++Y  G +L        E++FS+
Sbjct: 190 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSE 247
Query: 128 DTIRFXXXXXXXXXXXXHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           D  RF            H+   +VYRDLK EN+M+ ++GHI + DF L            
Sbjct: 248 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------------ 295
Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVG 246
                                  C  GI                             F G
Sbjct: 296 -----------------------CKEGIK---------------------DGATMKTFCG 311
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDL 303
           T EY+APE++E   +  AVDWW LGVV++EM+ G  PF     ++ F  IL    R P  
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 371
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPAR 357
           +G     ++L+  LL+KDP +R+G      +EI  H FF G+ W+ +  K   PP  P  
Sbjct: 372 LGPEA--KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP-- 427
Query: 358 FEHENNESDGRGRD 371
                +E+D R  D
Sbjct: 428 --QVTSETDTRYFD 439

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 78/349 (22%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L++   LG+G  G V LV++  +   +A+K++ +++I  K          D+    
Sbjct: 6   DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
             E RVL+N  HP L  L+    T   + + ++Y  G +L        E++F+++  RF 
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +VYRD+K EN+M+ ++GHI + DF L                   
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
                           C  GIS                            F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKXFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
           E++E   +  AVDWW LGVV++EM+ G  PF     +  F  IL          +P  ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+  LL+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 158/374 (42%), Gaps = 84/374 (22%)
Query: 8   RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG 67
           +P   +  +    +  LG+G  G V LVK+  +   +A+K++ +++I  K          
Sbjct: 143 KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---------- 192
Query: 68  DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
           D+      E RVL+N  HP L  L+    T   + + ++Y  G +L        E++FS+
Sbjct: 193 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSE 250
Query: 128 DTIRFXXXXXXXXXXXXHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           D  RF            H+   +VYRDLK EN+M+ ++GHI + DF L            
Sbjct: 251 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------------ 298
Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVG 246
                                  C  GI                             F G
Sbjct: 299 -----------------------CKEGIK---------------------DGATMKTFCG 314
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDL 303
           T EY+APE++E   +  AVDWW LGVV++EM+ G  PF     ++ F  IL    R P  
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 374
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPAR 357
           +G     ++L+  LL+KDP +R+G      +EI  H FF G+ W+ +  K   PP  P  
Sbjct: 375 LGPEA--KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP-- 430
Query: 358 FEHENNESDGRGRD 371
                +E+D R  D
Sbjct: 431 --QVTSETDTRYFD 442

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 157/358 (43%), Gaps = 84/358 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V LVK+  +   +A+K++ +++I  K          D+      E RVL+N 
Sbjct: 17  LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNS 66
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            HP L  L+    T   + + ++Y  G +L        E++FS+D  RF           
Sbjct: 67  RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 144 XHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
            H+   +VYRDLK EN+M+ ++GHI + DF L                     + GIK  
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--------------------KEGIKDG 164
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            + +  FC                                   GT EY+APE++E   + 
Sbjct: 165 AT-MKXFC-----------------------------------GTPEYLAPEVLEDNDYG 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLE 319
            AVDWW LGVV++EM+ G  PF     ++ F  IL    R P  +G     ++L+  LL+
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA--KSLLSGLLK 246
Query: 320 KDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPARFEHENNESDGRGRD 371
           KDP +R+G      +EI  H FF G+ W+ +  K   PP  P       +E+D R  D
Sbjct: 247 KDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP----QVTSETDTRYFD 300

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 157/358 (43%), Gaps = 84/358 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V LVK+  +   +A+K++ +++I  K          D+      E RVL+N 
Sbjct: 18  LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNS 67
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            HP L  L+    T   + + ++Y  G +L        E++FS+D  RF           
Sbjct: 68  RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 144 XHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
            H+   +VYRDLK EN+M+ ++GHI + DF L                     + GIK  
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--------------------KEGIKDG 165
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            + +  FC                                   GT EY+APE++E   + 
Sbjct: 166 AT-MKXFC-----------------------------------GTPEYLAPEVLEDNDYG 189
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLE 319
            AVDWW LGVV++EM+ G  PF     ++ F  IL    R P  +G     ++L+  LL+
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA--KSLLSGLLK 247
Query: 320 KDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPARFEHENNESDGRGRD 371
           KDP +R+G      +EI  H FF G+ W+ +  K   PP  P       +E+D R  D
Sbjct: 248 KDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP----QVTSETDTRYFD 301

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 157/358 (43%), Gaps = 84/358 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V LVK+  +   +A+K++ +++I  K          D+      E RVL+N 
Sbjct: 16  LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNS 65
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            HP L  L+    T   + + ++Y  G +L        E++FS+D  RF           
Sbjct: 66  RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 144 XHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
            H+   +VYRDLK EN+M+ ++GHI + DF L                     + GIK  
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--------------------KEGIKDG 163
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            + +  FC                                   GT EY+APE++E   + 
Sbjct: 164 AT-MKXFC-----------------------------------GTPEYLAPEVLEDNDYG 187
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLE 319
            AVDWW LGVV++EM+ G  PF     ++ F  IL    R P  +G     ++L+  LL+
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA--KSLLSGLLK 245
Query: 320 KDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPARFEHENNESDGRGRD 371
           KDP +R+G      +EI  H FF G+ W+ +  K   PP  P       +E+D R  D
Sbjct: 246 KDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP----QVTSETDTRYFD 299

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 162/373 (43%), Gaps = 92/373 (24%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  LR++   GRG+   V LV+  ++   +A+KV+         KEL N+D    +  +
Sbjct: 21  DFDLLRVI---GRGSYAKVLLVRLKKTDRIYAMKVV--------KKELVNDDEDIDW--V 67
Query: 74  SFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
             E+ V      HP L  L     T+  + + I+Y  G DL  +   Q ++   ++  RF
Sbjct: 68  QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 125
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                       H  GI+YRDLK +N+++   GHI L D+ +                  
Sbjct: 126 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------------ 167
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
                            C  G+   D                         F GT  Y+A
Sbjct: 168 -----------------CKEGLRPGDTT---------------------SXFCGTPNYIA 189
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCRPPDLV 304
           PEI+ G+ + F+VDWW+LGV++ EM+ G +PF   GSS       ++  ++++      +
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
Query: 305 GEPTPLR--NLIRRLLEKDPTKRIGV------EEIKGHEFFKGVNWELL--LKISRP--P 352
                ++  ++++  L KDP +R+G        +I+GH FF+ V+W+++   ++  P  P
Sbjct: 250 PRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 309
Query: 353 NIPARFEHENNES 365
           NI   F  +N +S
Sbjct: 310 NISGEFGLDNFDS 322

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 164/378 (43%), Gaps = 92/378 (24%)
Query: 9   PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
           P+   DF  LR++   GRG+   V LV+  ++   +A+KV+         KEL N+D   
Sbjct: 5   PLGLQDFDLLRVI---GRGSYAKVLLVRLKKTDRIYAMKVV--------KKELVNDDEDI 53
Query: 69  KYRRISFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
            +  +  E+ V      HP L  L     T+  + + I+Y  G DL  +   Q ++   +
Sbjct: 54  DW--VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE 109
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
           +  RF            H  GI+YRDLK +N+++   GHI L D+ +             
Sbjct: 110 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------- 156
Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGT 247
                                 C  G+   D                         F GT
Sbjct: 157 ----------------------CKEGLRPGD---------------------TTSXFCGT 173
Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCR 299
             Y+APEI+ G+ + F+VDWW+LGV++ EM+ G +PF   GSS       ++  ++++  
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 300 PPDLVGEPTPLR--NLIRRLLEKDPTKRIGVE------EIKGHEFFKGVNWELL--LKIS 349
               +     ++  ++++  L KDP +R+G        +I+GH FF+ V+W+++   ++ 
Sbjct: 234 KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 293
Query: 350 RP--PNIPARFEHENNES 365
            P  PNI   F  +N +S
Sbjct: 294 PPFKPNISGEFGLDNFDS 311

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 162/373 (43%), Gaps = 92/373 (24%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  LR++   GRG+   V LV+  ++   +A+KV+         KEL N+D    +  +
Sbjct: 6   DFDLLRVI---GRGSYAKVLLVRLKKTDRIYAMKVV--------KKELVNDDEDIDW--V 52
Query: 74  SFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
             E+ V      HP L  L     T+  + + I+Y  G DL  +   Q ++   ++  RF
Sbjct: 53  QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 110
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                       H  GI+YRDLK +N+++   GHI L D+ +                  
Sbjct: 111 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------------ 152
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
                            C  G+   D                         F GT  Y+A
Sbjct: 153 -----------------CKEGLRPGDTT---------------------SXFCGTPNYIA 174
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCRPPDLV 304
           PEI+ G+ + F+VDWW+LGV++ EM+ G +PF   GSS       ++  ++++      +
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 234
Query: 305 GEPTPLR--NLIRRLLEKDPTKRIGVE------EIKGHEFFKGVNWELL--LKISRP--P 352
                ++  ++++  L KDP +R+G        +I+GH FF+ V+W+++   ++  P  P
Sbjct: 235 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 294
Query: 353 NIPARFEHENNES 365
           NI   F  +N +S
Sbjct: 295 NISGEFGLDNFDS 307

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 92/373 (24%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  LR++   GRG+   V LV+  ++   +A++V+         KEL N+D    +  +
Sbjct: 53  DFDLLRVI---GRGSYAKVLLVRLKKTDRIYAMRVV--------KKELVNDDEDIDW--V 99
Query: 74  SFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
             E+ V      HP L  L     T+  + + I+Y  G DL  +   Q ++   ++  RF
Sbjct: 100 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 157
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                       H  GI+YRDLK +N+++   GHI L D+ +                  
Sbjct: 158 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------------ 199
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
                            C  G+   D                         F GT  Y+A
Sbjct: 200 -----------------CKEGLRPGDTT---------------------STFCGTPNYIA 221
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCRPPDLV 304
           PEI+ G+ + F+VDWW+LGV++ EM+ G +PF   GSS       ++  ++++      +
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 305 GEPTPLR--NLIRRLLEKDPTKRIGVE------EIKGHEFFKGVNWELL--LKISRP--P 352
                ++  ++++  L KDP +R+G        +I+GH FF+ V+W+++   ++  P  P
Sbjct: 282 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 341
Query: 353 NIPARFEHENNES 365
           NI   F  +N +S
Sbjct: 342 NISGEFGLDNFDS 354

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 77/328 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G+ G VFL +  ++++ FA+K + +D++      L ++D          E+RVL   
Sbjct: 26  LGKGSFGKVFLAEFKKTNQFFAIKALKKDVV------LMDDD----VECTMVEKRVLSLA 75
Query: 84  -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
            EHP L  +     T + + + ++Y  G DL  +   QS   F      F          
Sbjct: 76  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H+ GIVYRDLK +NI++ ++GHI + DF +             K  +  + ++     
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC------------KENMLGDAKT----- 176
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
               ++FC                                   GT +Y+APEI+ G+ ++
Sbjct: 177 ----NEFC-----------------------------------GTPDYIAPEILLGQKYN 197
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
            +VDWWS GV+L+EML G +PF G   +E F+ I    P     P  L    ++L+ +L 
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP---FYPRWLEKEAKDLLVKLF 254
Query: 319 EKDPTKRIGVE-EIKGHEFFKGVNWELL 345
            ++P KR+GV  +I+ H  F+ +NWE L
Sbjct: 255 VREPEKRLGVRGDIRQHPLFREINWEEL 282

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 148/336 (44%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 90
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 91  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 147
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN+  G    
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANSFVG---- 197
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                       T +YV+PE++  K   
Sbjct: 198 --------------------------------------------TAQYVSPELLTEKSAC 213
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 309

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 76/339 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 22  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 72  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 128
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G    
Sbjct: 129 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 178
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                       T +YV+PE++  K   
Sbjct: 179 --------------------------------------------TAQYVSPELLTEKSAC 194
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 254
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNI 354
            TKR+G EE++G      H FF+ V WE L +   PP +
Sbjct: 255 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKL 292

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 76/341 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 87
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 88  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 144
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  L       SP++          K+ 
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 187
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           R+                                       FVGT +YV+PE++  K   
Sbjct: 188 RA-------------------------------------NAFVGTAQYVSPELLTEKSAC 210
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNIPA 356
            TKR+G EE++G      H FF+ V WE L +   PP + A
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 310

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 76/341 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 86
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 87  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 143
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  L       SP++          K+ 
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 186
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           R+                                       FVGT +YV+PE++  K   
Sbjct: 187 RA-------------------------------------NSFVGTAQYVSPELLTEKSAC 209
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNIPA 356
            TKR+G EE++G      H FF+ V WE L +   PP + A
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 309

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 152/341 (44%), Gaps = 76/341 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 87
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 88  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 144
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  L       SP++          K+ 
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 187
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           R+                                       FVGT +YV+PE++  K   
Sbjct: 188 RA-------------------------------------NXFVGTAQYVSPELLTEKSAC 210
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNIPA 356
            TKR+G EE++G      H FF+ V WE L +   PP + A
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 310

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 152/341 (44%), Gaps = 76/341 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 86
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 87  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 143
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  L       SP++          K+ 
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 186
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           R+                                       FVGT +YV+PE++  K   
Sbjct: 187 RA-------------------------------------NXFVGTAQYVSPELLTEKSAC 209
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNIPA 356
            TKR+G EE++G      H FF+ V WE L +   PP + A
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 309

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 76/339 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 16  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 65
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 66  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 122
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G    
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 172
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                       T +YV+PE++  K   
Sbjct: 173 --------------------------------------------TAQYVSPELLTEKSAC 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 248
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNI 354
            TKR+G EE++G      H FF+ V WE L +   PP +
Sbjct: 249 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKL 286

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 76/339 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 15  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 64
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 65  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 121
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G    
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 171
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                       T +YV+PE++  K   
Sbjct: 172 --------------------------------------------TAQYVSPELLTEKSAC 187
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 247
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNI 354
            TKR+G EE++G      H FF+ V WE L +   PP +
Sbjct: 248 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKL 285

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 147/336 (43%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 17  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 66
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 67  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 123
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G    
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 173
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                       T +YV+PE++  K   
Sbjct: 174 --------------------------------------------TAQYVSPELLTEKSAC 189
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 249
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 250 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 285

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 147/336 (43%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 18  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 67
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 68  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 124
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G    
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 174
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                       T +YV+PE++  K   
Sbjct: 175 --------------------------------------------TAQYVSPELLTEKSAC 190
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 250
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 251 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 286

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 90  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  L       SP++          K+ 
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 189
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           R+                                       FVGT +YV+PE++  K   
Sbjct: 190 RA-------------------------------------NXFVGTAQYVSPELLTEKSAX 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 90  DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  L       SP++          K+ 
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 189
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           R+                                       FVGT +YV+PE++  K   
Sbjct: 190 RA-------------------------------------NSFVGTAQYVSPELLTEKSAS 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 45  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 94
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 95  DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 151
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  L       SP++          K+ 
Sbjct: 152 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 194
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           R+                                       FVGT +YV+PE++  K   
Sbjct: 195 RA-------------------------------------NXFVGTAQYVSPELLTEKSAC 217
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 277
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 278 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 313

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+     L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 38  LGEGSFSTTVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 87
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 88  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 144
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  L       SP++          K+ 
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 187
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           R+                                       FVGT +YV+PE++  K   
Sbjct: 188 RA-------------------------------------NXFVGTAQYVSPELLTEKSAC 210
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 306

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 149/366 (40%), Gaps = 90/366 (24%)
Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
              +  LG+G+ G V L +  E+ + +A+KV+ +D+I +           D       E+
Sbjct: 25  FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD----------DDVECTMTEK 74
Query: 78  RVL---RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
           R+L   RN  HP L +L     T   + + +++  G DL  +   Q  + F +   RF  
Sbjct: 75  RILSLARN--HPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYA 130
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
                     H+ GI+YRDLK +N+++   GH  L DF +                    
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM-------------------- 170
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
                          C  GI                             F GT +Y+APE
Sbjct: 171 ---------------CKEGIC---------------------NGVTTATFCGTPDYIAPE 194
Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR--- 311
           I++   +  AVDWW++GV+L+EML G  PF   +  + F  IL    D V  PT L    
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---NDEVVYPTWLHEDA 251
Query: 312 -NLIRRLLEKDPTKRIGV------EEIKGHEFFKGVNWELL--LKISRP--PNIPARFEH 360
             +++  + K+PT R+G         I  H FFK ++W  L   +I  P  P I +R + 
Sbjct: 252 TGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDV 311
Query: 361 ENNESD 366
            N + D
Sbjct: 312 SNFDPD 317

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 143/336 (42%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 43  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 92
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 93  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 149
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G  + 
Sbjct: 150 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 203
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            S                                                PE++  K   
Sbjct: 204 VS------------------------------------------------PELLTEKSAC 215
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D      P  R+L+ +LL  D
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLD 275
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 276 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 311

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 90  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G  + 
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 200
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            S                                                PE++  K   
Sbjct: 201 VS------------------------------------------------PELLTEKSAC 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 90
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 91  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 147
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G  + 
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 201
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            S                                                PE++  K   
Sbjct: 202 VS------------------------------------------------PELLTEKSAC 213
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 309

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 90  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G  + 
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 200
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            S                                                PE++  K   
Sbjct: 201 VS------------------------------------------------PELLTEKSAC 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 90  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G  + 
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 200
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            S                                                PE++  K   
Sbjct: 201 VS------------------------------------------------PELLTEKSAC 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 87
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 88  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 144
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G  + 
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 198
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            S                                                PE++  K   
Sbjct: 199 VS------------------------------------------------PELLTEKSAC 210
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 306

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ V+  +
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +HP   +L      D+ + + + Y   G  L  +RK  S   F +   RF          
Sbjct: 90  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA       AN   G  + 
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 200
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            S                                                PE++  K   
Sbjct: 201 VS------------------------------------------------PELLTEKSAC 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
            + D W+LG ++++++ G  PFR  +    F +I+    D   +  P  R+L+ +LL  D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
            TKR+G EE++G      H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 144/346 (41%), Gaps = 84/346 (24%)
Query: 10  IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           ++  DF+ L +   LG+G+ G V L     + E +A+K++ +D++ +           D 
Sbjct: 16  VKLTDFNFLMV---LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD----------DD 62
Query: 70  YRRISFEQRVLRNVEHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
                 E+RVL  ++ P  L +L     T   + + ++Y  G DL    +Q  +  F + 
Sbjct: 63  VECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEP 120
Query: 129 TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
              F            H  GI+YRDLK +N+M+   GHI + DF +  +           
Sbjct: 121 QAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE----------- 169
Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTE 248
                +   G+  R     +FC                                   GT 
Sbjct: 170 -----HMMDGVTTR-----EFC-----------------------------------GTP 184
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLV 304
           +Y+APEII  + +  +VDWW+ GV+L+EML G  PF G    E F  I+      P  L 
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLS 244
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL 345
            E     ++ + L+ K P KR+G       +++ H FF+ ++WE L
Sbjct: 245 KEAV---SICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKL 287

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 81/345 (23%)
Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           ++F    I+ A+G+G+ G V +V+  ++ + +A+K +       K K +  N+     R 
Sbjct: 12  VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYM------NKQKCVERNE----VRN 61
Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           +  E ++++ +EHP L  L      ++ +   +D   G DL    +Q     F ++T++ 
Sbjct: 62  VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKL 119
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                        N  I++RD+KP+NI++ E+GH+ + DF+++  L    P+ +  T +A
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML----PRETQITTMA 175
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
                                                                GT+ Y+A
Sbjct: 176 -----------------------------------------------------GTKPYMA 182
Query: 253 PEII---EGKGHDFAVDWWSLGVVLHEMLYGATPFR---GSSRKE---TFYRILCRPPDL 303
           PE+    +G G+ FAVDWWSLGV  +E+L G  P+     +S KE   TF   +   P  
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA 242
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIG-VEEIKGHEFFKGVNWELLLK 347
             +   + +L+++LLE +P +R   + +++   +   +NW+ + +
Sbjct: 243 WSQ--EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQ 285

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 82/349 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR- 78
           +V  +GRGA G V LV+   + + +A+K++ +  + K+S                +E+R 
Sbjct: 73  VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-----------AFFWEERD 121
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           ++     P + +L      D+++   ++Y PG DL +L    S     +   RF      
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVV 178
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H+MG ++RD+KP+N+++ ++GH+ L DF    K++                + G
Sbjct: 179 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----------------KEG 222
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
           + +        C + +                               GT +Y++PE+++ 
Sbjct: 223 MVR--------CDTAV-------------------------------GTPDYISPEVLKS 243
Query: 259 KGHDFA----VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTP 309
           +G D       DWWS+GV L+EML G TPF   S   T+ +I+        PD       
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 303
Query: 310 LRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWEL-LLKISRPPNIP 355
            +NLI   L     +  R GVEEIK H FFK   W    L+ +  P +P
Sbjct: 304 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 352

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 80/348 (22%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  +GRGA G V LV+   + + +A+K++       K + +  +D+   +     E+ +
Sbjct: 78  VVKVIGRGAFGEVQLVRHKSTRKVYAMKLL------SKFEMIKRSDSAFFWE----ERDI 127
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           +     P + +L      D+++   ++Y PG DL +L    S     +   RF       
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVVL 184
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H+MG ++RD+KP+N+++ ++GH+ L DF    K++                + G+
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----------------KEGM 228
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
            +        C + +                               GT +Y++PE+++ +
Sbjct: 229 VR--------CDTAV-------------------------------GTPDYISPEVLKSQ 249
Query: 260 GHDFA----VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
           G D       DWWS+GV L+EML G TPF   S   T+ +I+        PD        
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 309
Query: 311 RNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWEL-LLKISRPPNIP 355
           +NLI   L     +  R GVEEIK H FFK   W    L+ +  P +P
Sbjct: 310 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 357

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 82/349 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR- 78
           +V  +GRGA G V LV+   + + +A+K++ +  + K+S                +E+R 
Sbjct: 78  VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-----------AFFWEERD 126
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           ++     P + +L      D+++   ++Y PG DL +L    S     +   RF      
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVV 183
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H+MG ++RD+KP+N+++ ++GH+ L DF    K++                + G
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----------------KEG 227
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
           + +        C + +                               GT +Y++PE+++ 
Sbjct: 228 MVR--------CDTAV-------------------------------GTPDYISPEVLKS 248
Query: 259 KGHDFA----VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTP 309
           +G D       DWWS+GV L+EML G TPF   S   T+ +I+        PD       
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 308
Query: 310 LRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWEL-LLKISRPPNIP 355
            +NLI   L     +  R GVEEIK H FFK   W    L+ +  P +P
Sbjct: 309 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 357

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 146/357 (40%), Gaps = 85/357 (23%)
Query: 10  IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           ++  DF+ L +   LG+G+ G V L +   + E +A+K++ +D++ +           D 
Sbjct: 17  MKLTDFNFLMV---LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----------DD 63
Query: 70  YRRISFEQRVLR-NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
                 E+RVL    + P L +L     T   + + ++Y  G DL  +   Q    F + 
Sbjct: 64  VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEP 121
Query: 129 TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
              F             + GI+YRDLK +N+M+   GHI + DF +  +           
Sbjct: 122 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE----------- 170
Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTE 248
                N   G+  +      FC                                   GT 
Sbjct: 171 -----NIWDGVTTK-----XFC-----------------------------------GTP 185
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLV 304
           +Y+APEII  + +  +VDWW+ GV+L+EML G  PF G    E F  I+      P  + 
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMS 245
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPNIP 355
            E      + + L+ K P KR+G       +IK H FF+ ++WE L  K  +PP  P
Sbjct: 246 KEAVA---ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 299

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 146/357 (40%), Gaps = 85/357 (23%)
Query: 10  IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           ++  DF+ L +   LG+G+ G V L +   + E +A+K++ +D++ +           D 
Sbjct: 338 MKLTDFNFLMV---LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----------DD 384
Query: 70  YRRISFEQRVLR-NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
                 E+RVL    + P L +L     T   + + ++Y  G DL  +   Q    F + 
Sbjct: 385 VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEP 442
Query: 129 TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
              F             + GI+YRDLK +N+M+   GHI + DF +  +           
Sbjct: 443 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE----------- 491
Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTE 248
                N   G+  +      FC                                   GT 
Sbjct: 492 -----NIWDGVTTK-----XFC-----------------------------------GTP 506
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLV 304
           +Y+APEII  + +  +VDWW+ GV+L+EML G  PF G    E F  I+      P  + 
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMS 566
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPNIP 355
            E      + + L+ K P KR+G       +IK H FF+ ++WE L  K  +PP  P
Sbjct: 567 KEAV---AICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 620

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 139/335 (41%), Gaps = 81/335 (24%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  +GRGA G V LV+   S + +A+K++       K + +  +D+   +     E+ +
Sbjct: 79  VVKVIGRGAFGEVQLVRHKASQKVYAMKLL------SKFEMIKRSDSAFFWE----ERDI 128
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           +     P + +L      DK++   ++Y PG DL +L    S     +   +F       
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL---MSNYDVPEKWAKFYTAEVVL 185
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H+MG+++RD+KP+N+++ ++GH+ L DF    K+                  +G+
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD----------------ETGM 229
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                     C + +   D                               Y++PE+++ +
Sbjct: 230 VH--------CDTAVGTPD-------------------------------YISPEVLKSQ 250
Query: 260 GHDFA----VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------LCRPPDLVGEPTP 309
           G D       DWWS+GV L EML G TPF   S   T+ +I      LC P D       
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED-AEISKH 309
Query: 310 LRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNW 342
            +NLI   L     +  R GVEEIK H FFK   W
Sbjct: 310 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW 344

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 13/122 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CR--- 299
           F GT EY+APEI+   GH+ AVDWWSLG ++++ML GA PF G +RK+T  +IL C+   
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNW-ELLLKISRPPN 353
           PP L  E    R+L+++LL+++   R+G       E++ H FF+ +NW ELL +   PP 
Sbjct: 241 PPYLTQEA---RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 354 IP 355
            P
Sbjct: 298 KP 299

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 13/122 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CR--- 299
           F GT EY+APEI+   GH+ AVDWWSLG ++++ML GA PF G +RK+T  +IL C+   
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNW-ELLLKISRPPN 353
           PP L  E    R+L+++LL+++   R+G       E++ H FF+ +NW ELL +   PP 
Sbjct: 241 PPYLTQEA---RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 354 IP 355
            P
Sbjct: 298 KP 299

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 135/319 (42%), Gaps = 75/319 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V+L ++ +S    ALKV+++  +EK   E        + RR   E  +  ++
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 66
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            HP + RL G       V   ++Y P   ++  R+ Q    F +                
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H+  +++RD+KPEN+++   G + + DF  S          +P +            RR
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCH--------APSS------------RR 164
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
           + LS                                      GT +Y+ PE+IEG+ HD 
Sbjct: 165 TTLS--------------------------------------GTLDYLPPEMIEGRMHDE 186
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLEK 320
            VD WSLGV+ +E L G  PF  ++ +ET+ RI       PD V E    R+LI RLL+ 
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--RDLISRLLKH 244
Query: 321 DPTKRIGVEEIKGHEFFKG 339
           +P++R  + E+  H +   
Sbjct: 245 NPSQRPMLREVLEHPWITA 263

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 131/328 (39%), Gaps = 83/328 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
           +V  +G G  GV  L++D +S+E  A+K I R   + E   +E+ N+             
Sbjct: 23  LVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH------------- 69
Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
              R++ HP + R + V+ T   +   ++Y  G +L    +  +   FS+D  RF     
Sbjct: 70  ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 124
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H M + +RDLK EN ++                        SP   L      
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLD----------------------GSPAPRL------ 156
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                     K C+ G S    +H                       VGT  Y+APE++ 
Sbjct: 157 ----------KICAFGYSKSSVLHSQPKST-----------------VGTPAYIAPEVLL 189
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
            K +D  V D WS GV L+ ML GA PF         ++T +RIL      PD V     
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
            R+LI R+   DP KRI + EI+ HE+F
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 131/328 (39%), Gaps = 83/328 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
           +V  +G G  GV  L++D +S+E  A+K I R   + E   +E+ N+             
Sbjct: 23  LVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH------------- 69
Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
              R++ HP + R + V+ T   +   ++Y  G +L    +  +   FS+D  RF     
Sbjct: 70  ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 124
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H M + +RDLK EN ++                        SP   L      
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLD----------------------GSPAPRL------ 156
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                     K C+ G S    +H                       VGT  Y+APE++ 
Sbjct: 157 ----------KICAFGYSKSSVLHSQPKDT-----------------VGTPAYIAPEVLL 189
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
            K +D  V D WS GV L+ ML GA PF         ++T +RIL      PD V     
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
            R+LI R+   DP KRI + EI+ HE+F
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 13/123 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           F GT EY+APE++  +GH  + DWWS GV++ EML G+ PF+G  RKET   IL      
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK--- 246
Query: 304 VGEP----TPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPN 353
           +G P    T  ++L+R L +++P  R+     G EEIK H F+  ++W  L +   +PP 
Sbjct: 247 LGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPF 306
Query: 354 IPA 356
            PA
Sbjct: 307 KPA 309

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 130/328 (39%), Gaps = 83/328 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
           +V  +G G  GV  L++D +S+E  A+K I R   + E   +E+ N+             
Sbjct: 22  LVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH------------- 68
Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
              R++ HP + R + V+ T   +   ++Y  G +L    +  +   FS+D  RF     
Sbjct: 69  ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 123
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H M + +RDLK EN ++                        SP   L      
Sbjct: 124 ISGVSYCHAMQVCHRDLKLENTLLD----------------------GSPAPRL------ 155
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                     K C  G S    +H                       VGT  Y+APE++ 
Sbjct: 156 ----------KICDFGYSKSSVLHSQPKST-----------------VGTPAYIAPEVLL 188
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
            K +D  V D WS GV L+ ML GA PF         ++T +RIL      PD V     
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 248
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
            R+LI R+   DP KRI + EI+ HE+F
Sbjct: 249 CRHLISRIFVADPAKRISIPEIRNHEWF 276

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           F GT EY+APE++  +GH  + DWWS GV++ EML G  PF+G  RKET   IL      
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--- 243
Query: 304 VGEPTPL----RNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPN 353
           +G P  L    ++L+R L +++P  R+     GVEEIK H FF  ++W  L +    PP 
Sbjct: 244 LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPF 303
Query: 354 IP 355
            P
Sbjct: 304 KP 305

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           F GT EY+APE++  +GH  + DWWS GV++ EML G  PF+G  RKET   IL      
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--- 242
Query: 304 VGEPTPL----RNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPN 353
           +G P  L    ++L+R L +++P  R+     GVEEIK H FF  ++W  L +    PP 
Sbjct: 243 LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPF 302
Query: 354 IP 355
            P
Sbjct: 303 KP 304

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 129/328 (39%), Gaps = 83/328 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
           +V  +G G  GV  L++D +S+E  A+K I R   +     +E+ N+             
Sbjct: 23  LVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH------------- 69
Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
              R++ HP + R + V+ T   +   ++Y  G +L    +  +   FS+D  RF     
Sbjct: 70  ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 124
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H M + +RDLK EN ++                        SP   L      
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLD----------------------GSPAPRL------ 156
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                     K C  G S    +H                       VGT  Y+APE++ 
Sbjct: 157 ----------KICDFGYSKSSVLHSQPKST-----------------VGTPAYIAPEVLL 189
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
            K +D  V D WS GV L+ ML GA PF         ++T +RIL      PD V     
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
            R+LI R+   DP KRI + EI+ HE+F
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 132/328 (40%), Gaps = 83/328 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
           +V  +G G  GV  L++D +++E  A+K I R   + E   +E+ N+             
Sbjct: 23  LVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINH------------- 69
Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
              R++ HP + R + V+ T   +   ++Y  G +L    +  +   FS+D  RF     
Sbjct: 70  ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 124
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H M + +RDLK EN          L+D   + +L       S  +VL +  +S
Sbjct: 125 ISGVSYAHAMQVAHRDLKLEN---------TLLDGSPAPRLKIADFGYSKASVLHSQPKS 175
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                                                          VGT  Y+APE++ 
Sbjct: 176 A----------------------------------------------VGTPAYIAPEVLL 189
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
            K +D  V D WS GV L+ ML GA PF         ++T +RIL      PD V     
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
            R+LI R+   DP KRI + EI+ HE+F
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT +Y+APE++  K ++ ++DWWS G++++EML G TPF  S+  +T+ +IL    R P 
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKISRPPNIPAR 357
              E   +++L+ RL+ +D ++R+     G E++K H +FK V WE LL  SR    P  
Sbjct: 225 FFNE--DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLL--SRNIETPYE 280
Query: 358 FEHENNESDGRGRDGTKEIDVEKFVQG 384
              +  + D    D   E D+   VQG
Sbjct: 281 PPIQQGQGDTSQFDKYPEEDINYGVQG 307

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           F GT +Y+APEI+ G+ ++ +VDWWS GV+L+EML G +PF G   +E F+ I    P  
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP-- 235
Query: 304 VGEPTPL----RNLIRRLLEKDPTKRIGVE-EIKGHEFFKGVNWELL 345
              P  L    ++L+ +L  ++P KR+GV  +I+ H  F+ +NWE L
Sbjct: 236 -FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEEL 281

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 131/322 (40%), Gaps = 76/322 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I   LG G+ G V L    ++ +  ALK I R L++K           D + R+  E   
Sbjct: 13  IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK----------SDMHMRVEREISY 62
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           L+ + HP + +L  V++T   +   I+Y  G     + +++  +M  D+  RF       
Sbjct: 63  LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICA 120
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H   IV+RDLKPEN+++ +N ++ + DF L                      S I
Sbjct: 121 IEYC-HRHKIVHRDLKPENLLLDDNLNVKIADFGL----------------------SNI 157
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
               +FL   C S                                     Y APE+I GK
Sbjct: 158 MTDGNFLKTSCGS-----------------------------------PNYAAPEVINGK 182
Query: 260 GHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGEPTPLRNLIR 315
            +    VD WS G+VL+ ML G  PF        F ++   +   PD +      ++LIR
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGA--QSLIR 240
Query: 316 RLLEKDPTKRIGVEEIKGHEFF 337
           R++  DP +RI ++EI+   +F
Sbjct: 241 RMIVADPMQRITIQEIRRDPWF 262

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 79/324 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA   V L +D  + +  A+K I ++ +E K   + N            E  VL  +
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN------------EIAVLHKI 73
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  +  +   +   +    G +L    +   +  +++                
Sbjct: 74  KHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 144 XHNMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H++GIV+RDLKPEN++   + E+  IM+ DF LS    P                    
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG------------------- 172
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
              S LS  C                                   GT  YVAPE++  K 
Sbjct: 173 ---SVLSTAC-----------------------------------GTPGYVAPEVLAQKP 194
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
           +  AVD WS+GV+ + +L G  PF   +  + F +IL        P         ++ IR
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
            L+EKDP KR   E+   H +  G
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG 278

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 79/324 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA   V L +D  + +  A+K I ++ +E K   + N            E  VL  +
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN------------EIAVLHKI 73
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  +  +   +   +    G +L    +   +  +++                
Sbjct: 74  KHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 144 XHNMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H++GIV+RDLKPEN++   + E+  IM+ DF LS    P                    
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG------------------- 172
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
              S LS  C                                   GT  YVAPE++  K 
Sbjct: 173 ---SVLSTAC-----------------------------------GTPGYVAPEVLAQKP 194
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
           +  AVD WS+GV+ + +L G  PF   +  + F +IL        P         ++ IR
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
            L+EKDP KR   E+   H +  G
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG 278

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 79/324 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA   V L +D  + +  A+K I ++ +E K   + N            E  VL  +
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN------------EIAVLHKI 73
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  +  +   +   +    G +L    +   +  +++                
Sbjct: 74  KHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 144 XHNMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H++GIV+RDLKPEN++   + E+  IM+ DF LS    P                    
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG------------------- 172
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
              S LS  C                                   GT  YVAPE++  K 
Sbjct: 173 ---SVLSTAC-----------------------------------GTPGYVAPEVLAQKP 194
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
           +  AVD WS+GV+ + +L G  PF   +  + F +IL        P         ++ IR
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
            L+EKDP KR   E+   H +  G
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG 278

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WSLG +L+ +L G  PF  S  KET+ RI      +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 304 VGEPTPLRN-LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
                P+ + LIRR+L  DPT R  V E+   EFF      + L  S    +P RF
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC-LTVPPRF 316

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WSLG +L+ +L G  PF  S  KET+ RI      +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 304 VGEPTPLRN-LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
                P+ + LIRR+L  DPT R  V E+   EFF      + L  S    +P RF
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC-LTVPPRF 316

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WSLG +L+ +L G  PF  S  KET+ RI      +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 304 VGEPTPLRN-LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
                P+ + LIRR+L  DPT R  V E+   EFF      + L  S    +P RF
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC-LTVPPRF 316

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WSLG +L+ +L G  PF  S  KET+ RI      +
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 304 VGEPTPLRN-LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
                P+ + LIRR+L  DPT R  V E+   EFF      + L  S    +P RF
Sbjct: 246 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC-LTVPPRF 300

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 135/353 (38%), Gaps = 96/353 (27%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQR 78
           V  +G G  GV  L++D  + E  A+K I R   + E   +E+ N+              
Sbjct: 25  VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH-------------- 70
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
             R++ HP + R + V+ T   +   ++Y  G +L+   +  +   FS+D  RF      
Sbjct: 71  --RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY--ERICNAGRFSEDEARFFFQQLL 126
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H+M I +RDLK EN ++                        SP   L       
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLD----------------------GSPAPRL------- 157
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                    K C  G S    +H                       VGT  Y+APE++  
Sbjct: 158 ---------KICDFGYSKSSVLHSQPKST-----------------VGTPAYIAPEVLLR 191
Query: 259 KGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRILC---RPPDLVGEPTPL 310
           + +D  + D WS GV L+ ML GA PF         ++T  RIL      PD +      
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN 363
            +LI R+   DP  RI + EIK H +F        LK     N+PA   +E+N
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWF--------LK-----NLPADLMNESN 291

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 122/324 (37%), Gaps = 79/324 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA   V L +D  + +  A+K I +  +E K   + N            E  VL  +
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN------------EIAVLHKI 73
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  +  +   +   +    G +L    +   +  +++                
Sbjct: 74  KHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 144 XHNMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H++GIV+RDLKPEN++   + E+  IM+ DF LS    P                    
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG------------------- 172
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
              S LS  C                                   GT  YVAPE++  K 
Sbjct: 173 ---SVLSTAC-----------------------------------GTPGYVAPEVLAQKP 194
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
           +  AVD WS+GV+ + +L G  PF   +  + F +IL        P         ++ IR
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
            L+EKDP KR   E+   H +  G
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG 278

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPP 301
            GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                 + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 259 SHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW-ELLLKISRPPNIP 355
                + L++L+R LL+ D TKR      GV +IK H++F   +W  +  +    P IP
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW-ELLLKISRPPNIP 355
                + L++L+R LL+ D TKR      GV +IK H++F   +W  +  +    P IP
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 252
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 253 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDW 302

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 252
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 253 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 254
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 255 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 297

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 281 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 281 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 246
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 247 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 289

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WS+G +++ +L G  PF  S  KET+ RI      +
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 258
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
                P+  +LI+++L+ DPT R  + E+   EFF        L I+    IP RF    
Sbjct: 259 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRFSIAP 317
Query: 363 NESDGRGR 370
           +  D   R
Sbjct: 318 SSLDPSNR 325

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 245
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 246 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 288

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WS+G +++ +L G  PF  S  KET+ RI      +
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 260
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
                P+  +LI+++L+ DPT R  + E+   EFF        L I+    IP RF    
Sbjct: 261 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRFSIAP 319
Query: 363 NESDGRGR 370
           +  D   R
Sbjct: 320 SSLDPSNR 327

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WS+G +++ +L G  PF  S  KET+ RI      +
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 240
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
                P+  +LI+++L+ DPT R  + E+   EFF        L I+    IP RF    
Sbjct: 241 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRFSIAP 299
Query: 363 NESDGRGR 370
           +  D   R
Sbjct: 300 SSLDPSNR 307

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WS+G +++ +L G  PF  S  KET+ RI      +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
                P+  +LI+++L+ DPT R  + E+   EFF        L I+    IP RF    
Sbjct: 237 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRFSIAP 295
Query: 363 NESDGRGR 370
           +  D   R
Sbjct: 296 SSLDPSNR 303

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 281 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 14/124 (11%)
Query: 245 VGTEEYVAPEIIE----GKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
           VGT +Y++PEI++    GKG +    DWWSLGV ++EMLYG TPF   S  ET+ +I+  
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 300 ------PPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWELLLKISRP 351
                 P  +       ++LIRRL+     +  + G+E+ K H FF G++W+  ++    
Sbjct: 297 KERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWD-NIRNCEA 355
Query: 352 PNIP 355
           P IP
Sbjct: 356 PYIP 359

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 245 VGTEEYVAPEIIE----GKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
           VGT +Y++PEI++    G G +    DWWSLGV ++EMLYG TPF   S  ET+ +I+  
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 300 ------PPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWELLLKISRP 351
                 P  +       ++LI+RL+     +  + G+E+ K H FF+G+NWE +  +  P
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAP 372
Query: 352 --PNIPARFEHENNESD 366
             P++ +  +  N + D
Sbjct: 373 YIPDVSSPSDTSNFDVD 389

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 245 VGTEEYVAPEIIE----GKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
           VGT +Y++PEI++    G G +    DWWSLGV ++EMLYG TPF   S  ET+ +I+  
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 300 ------PPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWELLLKISRP 351
                 P  +       ++LI+RL+     +  + G+E+ K H FF+G+NWE +  +  P
Sbjct: 297 EERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAP 356
Query: 352 --PNIPARFEHENNESD 366
             P++ +  +  N + D
Sbjct: 357 YIPDVSSPSDTSNFDVD 373

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV++++M  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 140/371 (37%), Gaps = 80/371 (21%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG  G VF  +   + + +A K                      Y+    E+++L  V
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACK----------KLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
               +  L     T   +   +    G D+  H     +    F +    F         
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
              H   I+YRDLKPEN+++ ++G++ + D  L                 A   ++G  K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL-----------------AVELKAGQTK 345
Query: 202 RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH 261
            + +                                        GT  ++APE++ G+ +
Sbjct: 346 TKGY---------------------------------------AGTPGFMAPELLLGEEY 366
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPTPL-RNLIRR 316
           DF+VD+++LGV L+EM+    PFR        KE   R+L +      + +P  ++    
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 317 LLEKDPTKRIGVEE-----IKGHEFFKGVNW-ELLLKISRPPNIP-ARFEHENNESDGRG 369
           LL+KDP KR+G  +     ++ H  F+ ++W +L   +  PP +P +R  +  N  D   
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 370 RDGTKEIDVEK 380
               K +  EK
Sbjct: 487 FSTVKGVAFEK 497

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WS+G +++ +L G  PF  S  KET+ RI      +
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 234
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
                P+  +LI+++L+ DPT R  + E+   EFF        L I+    IP RF
Sbjct: 235 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRF 289

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 140/371 (37%), Gaps = 80/371 (21%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG  G VF  +   + + +A K                      Y+    E+++L  V
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACK----------KLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
               +  L     T   +   +    G D+  H     +    F +    F         
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
              H   I+YRDLKPEN+++ ++G++ + D  L                 A   ++G  K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL-----------------AVELKAGQTK 345
Query: 202 RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH 261
            + +                                        GT  ++APE++ G+ +
Sbjct: 346 TKGY---------------------------------------AGTPGFMAPELLLGEEY 366
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPTPL-RNLIRR 316
           DF+VD+++LGV L+EM+    PFR        KE   R+L +      + +P  ++    
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 317 LLEKDPTKRIGVEE-----IKGHEFFKGVNW-ELLLKISRPPNIP-ARFEHENNESDGRG 369
           LL+KDP KR+G  +     ++ H  F+ ++W +L   +  PP +P +R  +  N  D   
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 370 RDGTKEIDVEK 380
               K +  EK
Sbjct: 487 FSTVKGVAFEK 497

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 140/371 (37%), Gaps = 80/371 (21%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG  G VF  +   + + +A K                      Y+    E+++L  V
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACK----------KLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
               +  L     T   +   +    G D+  H     +    F +    F         
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
              H   I+YRDLKPEN+++ ++G++ + D  L                 A   ++G  K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL-----------------AVELKAGQTK 345
Query: 202 RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH 261
            + +                                        GT  ++APE++ G+ +
Sbjct: 346 TKGY---------------------------------------AGTPGFMAPELLLGEEY 366
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPTPL-RNLIRR 316
           DF+VD+++LGV L+EM+    PFR        KE   R+L +      + +P  ++    
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 317 LLEKDPTKRIGVEE-----IKGHEFFKGVNW-ELLLKISRPPNIP-ARFEHENNESDGRG 369
           LL+KDP KR+G  +     ++ H  F+ ++W +L   +  PP +P +R  +  N  D   
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 370 RDGTKEIDVEK 380
               K +  EK
Sbjct: 487 FSTVKGVAFEK 497

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+AP II  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y+APE++  KGH F VD WS+G +++ +L G  PF  S  KET+ RI      +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
                P+  +LI+++L+ DPT R  + E+   EFF
Sbjct: 237 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +I  H++F   +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDW 303

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT EY+APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TK       GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDW 302

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 131/345 (37%), Gaps = 79/345 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG  G VF  +   + + +A K                      Y+    E+++L  V
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACK----------KLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
               +  L     T   +   +    G D+  H     +    F +    F         
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
              H   I+YRDLKPEN+++ ++G++ + D  L                 A   ++G  K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL-----------------AVELKAGQTK 345
Query: 202 RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH 261
            + +                                        GT  ++APE++ G+ +
Sbjct: 346 TKGY---------------------------------------AGTPGFMAPELLLGEEY 366
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPTPL-RNLIRR 316
           DF+VD+++LGV L+EM+    PFR        KE   R+L +      + +P  ++    
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 317 LLEKDPTKRIGVEE-----IKGHEFFKGVNW-ELLLKISRPPNIP 355
           LL+KDP KR+G  +     ++ H  F+ ++W +L   +  PP +P
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT E +APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    R P 
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
                + L++L+R LL+ D TKR      GV +IK H++F   +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 79/324 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA   V L ++  + + FA+K I +  ++ K   + N            E  VLR +
Sbjct: 30  LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN------------EIAVLRKI 77
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  +  L  +  +   +   +    G +L    +   +  +++                
Sbjct: 78  KHENIVALEDIYESPNHLYLVMQLVSGGEL--FDRIVEKGFYTEKDASTLIRQVLDAVYY 135
Query: 144 XHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H MGIV+RDLKPEN++     E   IM+ DF L                      S ++
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGL----------------------SKME 173
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
            +   +S  C                                   GT  YVAPE++  K 
Sbjct: 174 GKGDVMSTAC-----------------------------------GTPGYVAPEVLAQKP 198
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
           +  AVD WS+GV+ + +L G  PF   +  + F +IL        P         ++ IR
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIR 258
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
            L+EKDP KR   E+   H +  G
Sbjct: 259 NLMEKDPNKRYTCEQAARHPWIAG 282

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 124/325 (38%), Gaps = 84/325 (25%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  LG GA G V L KD  +    A+K+I      KKS   T +++G     ++    VL
Sbjct: 9   VKKLGSGAYGEVLLCKDKLTGAERAIKII------KKSSVTTTSNSGALLDEVA----VL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS---LRKQQSEQMFSDDTIRFXXXXX 137
           + ++HP + +L       +     ++   G +L     LR     Q FS+          
Sbjct: 59  KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----QKFSEVDAAVIMKQV 113
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV---LAAN 194
                  H   IV+RDLKPEN++                 L  K+  A  K V   L+A+
Sbjct: 114 LSGTTYLHKHNIVHRDLKPENLL-----------------LESKSRDALIKIVDFGLSAH 156
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
              G K +                                          +GT  Y+APE
Sbjct: 157 FEVGGKMKER----------------------------------------LGTAYYIAPE 176
Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCRPPDLVGEPTP 309
           ++  K +D   D WS GV+L+ +L G  PF G + +E   R+        PPD       
Sbjct: 177 VLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDE 235
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGH 334
            + L++ +L  +P+KRI  EE   H
Sbjct: 236 AKQLVKLMLTYEPSKRISAEEALNH 260

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 132/338 (39%), Gaps = 76/338 (22%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +IV  LG G+ G V L     + +  ALK+I + ++ K           D   RI  E  
Sbjct: 11  QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK----------SDMQGRIEREIS 60
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
            LR + HP + +L  V+ +   +   I+Y  G +L     Q+ ++M   +  RF      
Sbjct: 61  YLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIIS 118
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLKPEN+++ E+ ++ + DF LS                       
Sbjct: 119 AVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSN---------------------- 155
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
           I    +FL   C S                                     Y APE+I G
Sbjct: 156 IMTDGNFLKTSCGS-----------------------------------PNYAAPEVISG 180
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRR 316
           K +    VD WS GV+L+ ML    PF   S    F  I      L    +P    LI+R
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 240
Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI 354
           +L  +P  RI + EI   ++FK    E LL    PP++
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFKVDLPEYLL----PPDL 274

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 76/317 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + + +  A+++I +  +           N    +++  E R
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++             +   +F      
Sbjct: 66  IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN+++  + +I + DF  S + +                  G
Sbjct: 126 VQYC--HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-----------------FG 166
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
            K     L +FC                                   G+  Y APE+ +G
Sbjct: 167 NK-----LDEFC-----------------------------------GSPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P  +   T   NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
           ++ L  +P+KR  +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 132/338 (39%), Gaps = 76/338 (22%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +IV  LG G+ G V L     + +  ALK+I + ++ K           D   RI  E  
Sbjct: 7   QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK----------SDMQGRIEREIS 56
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
            LR + HP + +L  V+ +   +   I+Y  G +L     Q+ ++M   +  RF      
Sbjct: 57  YLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIIS 114
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLKPEN+++ E+ ++ + DF LS                       
Sbjct: 115 AVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSN---------------------- 151
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
           I    +FL   C S                                     Y APE+I G
Sbjct: 152 IMTDGNFLKTSCGS-----------------------------------PNYAAPEVISG 176
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRR 316
           K +    VD WS GV+L+ ML    PF   S    F  I      L    +P    LI+R
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 236
Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI 354
           +L  +P  RI + EI   ++FK    E LL    PP++
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFKVDLPEYLL----PPDL 270

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 125/322 (38%), Gaps = 72/322 (22%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +IV  LG G+ G V L     + +  ALK+I + ++ K           D   RI  E  
Sbjct: 16  QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK----------SDMQGRIEREIS 65
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
            LR + HP + +L  V+ +   +   I+Y  G +L     Q+ ++M   +  RF      
Sbjct: 66  YLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIIS 123
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLKPEN+++ E+ ++ + DF LS                       
Sbjct: 124 AVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSN---------------------- 160
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
           I    +FL   C S                                     Y APE+I G
Sbjct: 161 IMTDGNFLKTSCGS-----------------------------------PNYAAPEVISG 185
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRR 316
           K +    VD WS GV+L+ ML    PF   S    F  I      L    +P    LI+R
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 245
Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
           +L  +P  RI + EI   ++FK
Sbjct: 246 MLIVNPLNRISIHEIMQDDWFK 267

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 125/322 (38%), Gaps = 72/322 (22%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +IV  LG G+ G V L     + +  ALK+I + ++ K           D   RI  E  
Sbjct: 17  QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK----------SDMQGRIEREIS 66
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
            LR + HP + +L  V+ +   +   I+Y  G +L     Q+ ++M   +  RF      
Sbjct: 67  YLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIIS 124
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLKPEN+++ E+ ++ + DF LS                       
Sbjct: 125 AVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSN---------------------- 161
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
           I    +FL   C S                                     Y APE+I G
Sbjct: 162 IMTDGNFLKTSCGS-----------------------------------PNYAAPEVISG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRR 316
           K +    VD WS GV+L+ ML    PF   S    F  I      L    +P    LI+R
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 246
Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
           +L  +P  RI + EI   ++FK
Sbjct: 247 MLIVNPLNRISIHEIMQDDWFK 268

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 242
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 243 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 279

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 252 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 288

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF   + +ET+ RI       
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ + ++R+ + E+  H + K 
Sbjct: 230 PDFVTEGA--RDLISRLLKHNASQRLTLAEVLEHPWIKA 266

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF   + +ET+ RI       
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ + ++R+ + E+  H + K 
Sbjct: 230 PDFVTEGA--RDLISRLLKHNASQRLTLAEVLEHPWIKA 266

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 245 VGTEEYVAPEIIEGKGHDFA-------VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI- 296
           VGT +Y++PEI++  G            DWW+LGV  +EM YG TPF   S  ET+ +I 
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
Query: 297 -----LCRPPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWELLLKIS 349
                L  P    G P   R+ I+RLL    T+  R G  + + H FF G++W+  L+ S
Sbjct: 284 HYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWD-GLRDS 342
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEID-VEKFVQGIFAGGGDA 392
            PP  P          D  G   T   D VE  +  + +GGG+ 
Sbjct: 343 VPPFTP----------DFEGATDTCNFDLVEDGLTAMVSGGGET 376

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 252 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 288

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DFS  RI+   GRG  G V+  +  ++ + +A+K + +  I+ K  E            +
Sbjct: 190 DFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TL 235
Query: 74  SFEQRVLRNV----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           +  +R++ ++    + P +  +     T   + + +D   G DLH    Q    +FS+  
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAD 293
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +RF            HN  +VYRDLKP NI++ E+GH+ + D  L+   S K P AS  T
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 353

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 11/126 (8%)
Query: 245 VGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRP 300
           VGT  Y+APE+++ G  +D + DW+SLG +L ++L G +PFR    K   E     L   
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
            +L    +P LR+L+  LL++D  +R+     G +E+K   FF+ ++W+++ L+   PP 
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 354 IPARFE 359
           IP R E
Sbjct: 471 IPPRGE 476

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 227 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 263

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DFS  RI+   GRG  G V+  +  ++ + +A+K + +  I+ K  E            +
Sbjct: 189 DFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TL 234
Query: 74  SFEQRVLRNV----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           +  +R++ ++    + P +  +     T   + + +D   G DLH    Q    +FS+  
Sbjct: 235 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAD 292
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +RF            HN  +VYRDLKP NI++ E+GH+ + D  L+   S K P AS  T
Sbjct: 293 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 352

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 11/126 (8%)
Query: 245 VGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRP 300
           VGT  Y+APE+++ G  +D + DW+SLG +L ++L G +PFR    K   E     L   
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
            +L    +P LR+L+  LL++D  +R+     G +E+K   FF+ ++W+++ L+   PP 
Sbjct: 410 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 469
Query: 354 IPARFE 359
           IP R E
Sbjct: 470 IPPRGE 475

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 227 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 263

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 228 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 264

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 231 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 267

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 231 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 267

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 228 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 264

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 231 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 267

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DFS  RI+   GRG  G V+  +  ++ + +A+K + +  I+ K  E            +
Sbjct: 190 DFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TL 235
Query: 74  SFEQRVLRNV----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           +  +R++ ++    + P +  +     T   + + +D   G DLH    Q    +FS+  
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAD 293
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +RF            HN  +VYRDLKP NI++ E+GH+ + D  L+   S K P AS  T
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 353

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 245 VGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRP 300
           VGT  Y+APE+++ G  +D + DW+SLG +L ++L G +PFR    K   E     L   
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
            +L    +P LR+L+  LL++D  +R+     G +E+K   FF+ ++W+++ L+   PP 
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 354 IPARFEHENNES------DGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEV--------N 399
           IP R E    ++      D     G K +D ++ +   F        + EV        N
Sbjct: 471 IPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTIN 530
Query: 400 DEMNKNRGGEKVNNQRHACEEDNFL 424
            E ++    +K  N++   EED  L
Sbjct: 531 AETDRLEARKKTKNKQLGHEEDYAL 555

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DFS  RI+   GRG  G V+  +  ++ + +A+K + +  I+ K  E            +
Sbjct: 190 DFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TL 235
Query: 74  SFEQRVLRNV----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
           +  +R++ ++    + P +  +     T   + + +D   G DLH    Q    +FS+  
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAD 293
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +RF            HN  +VYRDLKP NI++ E+GH+ + D  L+   S K P AS  T
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 353

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 245 VGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRP 300
           VGT  Y+APE+++ G  +D + DW+SLG +L ++L G +PFR    K   E     L   
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
            +L    +P LR+L+  LL++D  +R+     G +E+K   FF+ ++W+++ L+   PP 
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 354 IPARFEHENNES------DGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEV--------N 399
           IP R E    ++      D     G K +D ++ +   F        + EV        N
Sbjct: 471 IPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTIN 530
Query: 400 DEMNKNRGGEKVNNQRHACEEDNFL 424
            E ++    +K  N++   EED  L
Sbjct: 531 AETDRLEARKKTKNKQLGHEEDYAL 555

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
           GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       PD
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
            V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 233 FVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 267

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 224
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 225 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 261

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 229
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 230 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 266

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 231 PDFVTEGA--RDLISRLLKHNPSQRPXLREVLEHPWITA 267

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 222
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 223 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 259

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI       
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 11/122 (9%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRPP 301
           VGT  Y+APE+++ + + F+ DWW+LG +L+EM+ G +PF+   +K   E   R++   P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 302 DLVGE--PTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPN 353
           +   E      R+L  +LL KDP +R+G       E+K H  FK +N++ L   +  PP 
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 354 IP 355
            P
Sbjct: 466 KP 467

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 11/122 (9%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRPP 301
           VGT  Y+APE+++ + + F+ DWW+LG +L+EM+ G +PF+   +K   E   R++   P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 302 DLVGE--PTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPN 353
           +   E      R+L  +LL KDP +R+G       E+K H  FK +N++ L   +  PP 
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 354 IP 355
            P
Sbjct: 466 KP 467

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ H+  VD W +GV+ +E+L G  PF  +S  ET+ RI+    + 
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKF 240
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           P  V  PT  ++LI +LL  +P++R+ + ++  H + + 
Sbjct: 241 PASV--PTGAQDLISKLLRHNPSERLPLAQVSAHPWVRA 277

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + + +  A+K+I +  +           N    +++  E R
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++             +   +F      
Sbjct: 66  IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN         +L+D D++ K++                  G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                +F +K  +                                F G+  Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDT--------------------------------FCGSPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P  +   T   NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
           ++ L  +P+KR  +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + + +  A+K+I +  +           N    +++  E R
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++             +   +F      
Sbjct: 66  IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN         +L+D D++ K++                  G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                +F +K  +                                F G+  Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDT--------------------------------FCGSPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P  +   T   NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
           ++ L  +P+KR  +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEG+ HD  VD WSLGV+ +E L G  PF  ++ ++T+ RI       
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           PD V E    R+LI RLL+ +P++R  + E+  H +   
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 76/317 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + + +  A+K+I +  +           N    +++  E R
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++             +   +F      
Sbjct: 66  IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN         +L+D D++ K++                  G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                +F +K  +                                F G   Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDA--------------------------------FCGAPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P  +   T   NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
           ++ L  +P+KR  +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 127/331 (38%), Gaps = 79/331 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           IV  LG GA G V+  K+ E+    A KVI     E KS+E        +      E  +
Sbjct: 15  IVGELGDGAFGKVYKAKNKETGALAAAKVI-----ETKSEE--------ELEDYIVEIEI 61
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           L   +HP + +L G    D  +   I++CPG  + ++   + ++  ++  I+        
Sbjct: 62  LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLE 120
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H+  I++RDLK  N+++   G I L DF +S K                N ++ +
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK----------------NLKT-L 163
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
           +KR S                                       F+GT  ++APE++   
Sbjct: 164 QKRDS---------------------------------------FIGTPYWMAPEVVMCE 184
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP----L 310
             +   +D+  D WSLG+ L EM     P    +      +I    P  +  P+      
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 244
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+ ++  L+K+P  R    ++  H F   + 
Sbjct: 245 RDFLKIALDKNPETRPSAAQLLEHPFVSSIT 275

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 127/317 (40%), Gaps = 76/317 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + +    A+K+I +  +           N    +++  E R
Sbjct: 15  RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-----------NPTSLQKLFREVR 63
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++             +   R       
Sbjct: 64  IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIV 121
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN         +L+D D++ K++                   
Sbjct: 122 SAVQYCHQKRIVHRDLKAEN---------LLLDADMNIKIAD------------------ 154
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                 F ++F   G                              F G+  Y APE+ +G
Sbjct: 155 ----FGFSNEFTVGG--------------------------KLDTFCGSPPYAAPELFQG 184
Query: 259 KGHDF-AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P  +   T   NL+
Sbjct: 185 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 242
Query: 315 RRLLEKDPTKRIGVEEI 331
           +R L  +P KR  +E+I
Sbjct: 243 KRFLVLNPIKRGTLEQI 259

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 129/328 (39%), Gaps = 83/328 (25%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + +    A+K+I +  +           N    +++  E R
Sbjct: 18  RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-----------NPTSLQKLFREVR 66
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++             +   R       
Sbjct: 67  IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIV 124
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN         +L+D D++ K++                   
Sbjct: 125 SAVQYCHQKRIVHRDLKAEN---------LLLDADMNIKIAD------------------ 157
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                 F ++F   G                              F G   Y APE+ +G
Sbjct: 158 ----FGFSNEFTVGG--------------------------KLDAFCGAPPYAAPELFQG 187
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P  +   T   NL+
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 245
Query: 315 RRLLEKDPTKRIGVEEI-------KGHE 335
           +R L  +P KR  +E+I        GHE
Sbjct: 246 KRFLVLNPIKRGTLEQIMKDRWINAGHE 273

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 127/331 (38%), Gaps = 79/331 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           IV  LG GA G V+  K+ E+    A KVI     E KS+E        +      E  +
Sbjct: 23  IVGELGDGAFGKVYKAKNKETGALAAAKVI-----ETKSEE--------ELEDYIVEIEI 69
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           L   +HP + +L G    D  +   I++CPG  + ++   + ++  ++  I+        
Sbjct: 70  LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLE 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H+  I++RDLK  N+++   G I L DF +S K                N ++ +
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK----------------NLKT-L 171
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
           +KR S                                       F+GT  ++APE++   
Sbjct: 172 QKRDS---------------------------------------FIGTPYWMAPEVVMCE 192
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP----L 310
             +   +D+  D WSLG+ L EM     P    +      +I    P  +  P+      
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+ ++  L+K+P  R    ++  H F   + 
Sbjct: 253 RDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + + +  A+K+I +  +           N    +++  E R
Sbjct: 10  RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 58
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++       +     +   R       
Sbjct: 59  IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGWMKEKEARAKFRQIV 116
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN         +L+D D++ K++                  G
Sbjct: 117 SAVQYCHQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 151
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                +F +K  +                                F G+  Y APE+ +G
Sbjct: 152 FSNEFTFGNKLDT--------------------------------FCGSPPYAAPELFQG 179
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P  +   T   NL+
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 237
Query: 315 RRLLEKDPTKRIGVEEI 331
           ++ L  +P+KR  +E+I
Sbjct: 238 KKFLILNPSKRGTLEQI 254

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + + +  A+++I +  +           N    +++  E R
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++             +   +F      
Sbjct: 66  IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN         +L+D D++ K++                  G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                +F +K  +                                F G+  Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDT--------------------------------FCGSPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P  +   T   NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
           ++ L  +P+KR  +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 123/327 (37%), Gaps = 75/327 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   ++  +   +A K I       K ++   +  G     I  E  +LR V
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVCREEIEREVSILRQV 72
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            HP +  L  V      V   ++   G +L     Q+ E +  ++   F           
Sbjct: 73  LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            H   I + DLKPENIM+ +      HI L+DF                  LA     G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
           + +  F                                        GT E+VAPEI+  +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPL-RNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D       + + L ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+LL K+  KR+ ++E   H +   V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 123/321 (38%), Gaps = 77/321 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA  VV     + +   +A K+I        +K+L+  D    ++++  E R+ R +
Sbjct: 12  IGKGAFSVVRRCVKLCTGHEYAAKII-------NTKKLSARD----HQKLEREARICRLL 60
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  + RL   +S + F     D   G +L       + + +S+                
Sbjct: 61  KHSNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H MG+V+RDLKPEN++                              LA+  +    K  
Sbjct: 119 CHQMGVVHRDLKPENLL------------------------------LASKCKGAAVKLA 148
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F       G+++E                          F GT  Y++PE++  + +  
Sbjct: 149 DF-------GLAIE----------------VQGDQQAWFGFAGTPGYLSPEVLRKEAYGK 185
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
            VD W+ GV+L+ +L G  PF    + + + +I     D    P+P         +NLI 
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF---PSPEWDTVTPEAKNLIN 242
Query: 316 RLLEKDPTKRIGVEEIKGHEF 336
           ++L  +P KRI   E   H +
Sbjct: 243 QMLTINPAKRITAHEALKHPW 263

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 125/327 (38%), Gaps = 77/327 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++   LG+GA  VV     + + + +A K+I        +K+L+  D    ++++  E R
Sbjct: 7   QLFEELGKGAFSVVRRCMKIPTGQEYAAKII-------NTKKLSARD----HQKLEREAR 55
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           + R ++HP + RL   +S + F     D   G +L       + + +S+           
Sbjct: 56  ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQIL 113
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H  GIV+RDLKPEN++                              LA+ ++  
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLL------------------------------LASKSKGA 143
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
             K   F       G+++E                          F GT  Y++PE++  
Sbjct: 144 AVKLADF-------GLAIE----------------VQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------L 310
             +   VD W+ GV+L+ +L G  PF    +   + +I     D    P+P         
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF---PSPEWDTVTPEA 237
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           ++LI ++L  +P KRI   E   H + 
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 125/327 (38%), Gaps = 77/327 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++   LG+GA  VV     + + + +A K+I        +K+L+  D    ++++  E R
Sbjct: 7   QLFEELGKGAFSVVRRCMKIPTGQEYAAKII-------NTKKLSARD----HQKLEREAR 55
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           + R ++HP + RL   +S + F     D   G +L       + + +S+           
Sbjct: 56  ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQIL 113
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H  GIV+RDLKPEN++                              LA+ ++  
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLL------------------------------LASKSKGA 143
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
             K   F       G+++E                          F GT  Y++PE++  
Sbjct: 144 AVKLADF-------GLAIE----------------VQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------L 310
             +   VD W+ GV+L+ +L G  PF    +   + +I     D    P+P         
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF---PSPEWDTVTPEA 237
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           ++LI ++L  +P KRI   E   H + 
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 126/330 (38%), Gaps = 77/330 (23%)
Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
           S  ++   LG+GA  VV     V + + +A K+I        +K+L+  D    ++++  
Sbjct: 22  SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKII-------NTKKLSARD----HQKLER 70
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E R+ R ++HP + RL   +S +       D   G +L       + + +S+        
Sbjct: 71  EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQ 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                    H MG+V+RDLKPEN+                              +LA+  
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENL------------------------------LLASKL 158
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           +    K   F       G+++E                          F GT  Y++PE+
Sbjct: 159 KGAAVKLADF-------GLAIE----------------VEGEQQAWFGFAGTPGYLSPEV 195
Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP------ 309
           +    +   VD W+ GV+L+ +L G  PF    +   + +I     D    P+P      
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF---PSPEWDTVT 252
Query: 310 --LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
              ++LI ++L  +P+KRI   E   H + 
Sbjct: 253 PEAKDLINKMLTINPSKRITAAEALKHPWI 282

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 129/326 (39%), Gaps = 79/326 (24%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  LG GA G V+  ++ E+S   A KVI     + KS+E        +      E  +
Sbjct: 41  IIGELGDGAFGKVYKAQNKETSVLAAAKVI-----DTKSEE--------ELEDYMVEIDI 87
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           L + +HP + +L      +  +   I++C G  + ++   + E+  ++  I+        
Sbjct: 88  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLD 146
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H+  I++RDLK  NI+   +G I L DF +S K                NTR+ I
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRT-I 189
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
           ++R S                                       F+GT  ++APE++   
Sbjct: 190 QRRDS---------------------------------------FIGTPYWMAPEVVMCE 210
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPL 310
             + + +D+  D WSLG+ L EM     P    +      +I    P  + +P    +  
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
           ++ +++ LEK+   R    ++  H F
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPF 296

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   DV + +  A++ +  +L ++  KEL  N           E  V+R  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 74
Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           ++P ++  L   L  D+     ++Y  G    SL    +E    +  I            
Sbjct: 75  KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H+  +++RD+K +NI++  +G + L DF    ++   TP+ S ++ +           
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXM----------- 176
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                     VGT  ++APE++  K + 
Sbjct: 177 ------------------------------------------VGTPYWMAPEVVTRKAYG 194
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           E D  KR   +E+  H+F K
Sbjct: 255 EMDVEKRGSAKELLQHQFLK 274

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 81/333 (24%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           IV  LG+G+ G V   KD  + + +A+KVI      K S +  N D     R +     +
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQEYAVKVI-----NKASAK--NKDTSTILREV----EL 74
Query: 80  LRNVEHPLLPRLRGVLS-TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           L+ ++HP + +L  +L  +  F      Y  G     + K++    FS+           
Sbjct: 75  LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVF 131
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                 H   IV+RDLKPENI+++   ++  I ++DF LS             T    NT
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-------------TCFQQNT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           +  +K R                                          +GT  Y+APE+
Sbjct: 179 K--MKDR------------------------------------------IGTAYYIAPEV 194
Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
           + G  +D   D WS GV+L+ +L G  PF G +  +   R+         P         
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
           ++LIR++L   P+ RI   +   H + +  + E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   DV + +  A++ +  +L ++  KEL  N           E  V+R  
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 75
Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           ++P ++  L   L  D+     ++Y  G    SL    +E    +  I            
Sbjct: 76  KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 131
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H+  +++RD+K +NI++  +G + L DF    ++   TP+ S ++ +           
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXM----------- 177
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                     VGT  ++APE++  K + 
Sbjct: 178 ------------------------------------------VGTPYWMAPEVVTRKAYG 195
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           E D  KR   +E+  H+F K
Sbjct: 256 EMDVEKRGSAKELIQHQFLK 275

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 130/333 (39%), Gaps = 81/333 (24%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           IV  LG+G+ G V   KD  + + +A+KVI      K S +  N D     R    E  +
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQEYAVKVI-----NKASAK--NKDTSTILR----EVEL 74
Query: 80  LRNVEHPLLPRLRGVLS-TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           L+ ++HP + +L  +L  +  F      Y  G     + K++    FS+           
Sbjct: 75  LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVF 131
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                 H   IV+RDLKPENI+++   ++  I ++DF LS             T    NT
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-------------TCFQQNT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           +  +K R                                          +GT  Y+APE+
Sbjct: 179 K--MKDR------------------------------------------IGTAYYIAPEV 194
Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
           + G  +D   D WS GV+L+ +L G  PF G +  +   R+         P         
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
           ++LIR++L   P+ RI   +   H + +  + E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/326 (22%), Positives = 128/326 (39%), Gaps = 79/326 (24%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  LG GA G V+  ++ E+S   A KVI     + KS+E        +      E  +
Sbjct: 41  IIGELGDGAFGKVYKAQNKETSVLAAAKVI-----DTKSEE--------ELEDYMVEIDI 87
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           L + +HP + +L      +  +   I++C G  + ++   + E+  ++  I+        
Sbjct: 88  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLD 146
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H+  I++RDLK  NI+   +G I L DF +S K                NTR  I
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRX-I 189
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
           ++R S                                       F+GT  ++APE++   
Sbjct: 190 QRRDS---------------------------------------FIGTPYWMAPEVVMCE 210
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPL 310
             + + +D+  D WSLG+ L EM     P    +      +I    P  + +P    +  
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
           ++ +++ LEK+   R    ++  H F
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPF 296

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 130/333 (39%), Gaps = 81/333 (24%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           IV  LG+G+ G V   KD  + + +A+KVI      K S +  N D     R    E  +
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQEYAVKVI-----NKASAK--NKDTSTILR----EVEL 74
Query: 80  LRNVEHPLLPRLRGVLS-TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           L+ ++HP + +L  +L  +  F      Y  G     + K++    FS+           
Sbjct: 75  LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVF 131
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                 H   IV+RDLKPENI+++   ++  I ++DF LS             T    NT
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-------------TCFQQNT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           +  +K R                                          +GT  Y+APE+
Sbjct: 179 K--MKDR------------------------------------------IGTAYYIAPEV 194
Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
           + G  +D   D WS GV+L+ +L G  PF G +  +   R+         P         
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
           ++LIR++L   P+ RI   +   H + +  + E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 122/328 (37%), Gaps = 83/328 (25%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  LG GA   VFLVK   + + FALK I      KKS    ++        +  E  VL
Sbjct: 14  MEVLGSGAFSEVFLVKQRLTGKLFALKCI------KKSPAFRDSS-------LENEIAVL 60
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + ++H  +  L  +  +       +    G +L    +     ++++             
Sbjct: 61  KKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDASLVIQQVLSA 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H  GIV+RDLKPEN++                     TP+ + K ++   T  G+ 
Sbjct: 119 VKYLHENGIVHRDLKPENLLYL-------------------TPEENSKIMI---TDFGLS 156
Query: 201 K--RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
           K  +   +S  C                                   GT  YVAPE++  
Sbjct: 157 KMEQNGIMSTAC-----------------------------------GTPGYVAPEVLAQ 181
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-------KETFYRILCRPPDLVGEPTPLR 311
           K +  AVD WS+GV+ + +L G  PF   +        KE +Y       D + E    +
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESA--K 239
Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           + I  LLEKDP +R   E+   H +  G
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWIDG 267

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   DV + +  A++ +  +L ++  KEL  N           E  V+R  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 74
Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           ++P ++  L   L  D+     ++Y  G    SL    +E    +  I            
Sbjct: 75  KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H+  +++RD+K +NI++  +G + L DF    ++   TP+ S ++ +           
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTM----------- 176
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                     VGT  ++APE++  K + 
Sbjct: 177 ------------------------------------------VGTPYWMAPEVVTRKAYG 194
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           + D  KR   +E+  H+F K
Sbjct: 255 DMDVEKRGSAKELLQHQFLK 274

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   DV + +  A++ +  +L ++  KEL  N           E  V+R  
Sbjct: 29  IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 75
Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           ++P ++  L   L  D+     ++Y  G    SL    +E    +  I            
Sbjct: 76  KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 131
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H+  +++R++K +NI++  +G + L DF    ++   TP+ S ++ +           
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTM----------- 177
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                     VGT  ++APE++  K + 
Sbjct: 178 ------------------------------------------VGTPYWMAPEVVTRKAYG 195
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           E D  KR   +E+  H+F K
Sbjct: 256 EMDVEKRGSAKELIQHQFLK 275

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 122/327 (37%), Gaps = 75/327 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   ++  +   +A K I       K ++   +  G     I  E  +LR V
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            H  +  L  V      V   ++   G +L     Q+ E +  ++   F           
Sbjct: 73  LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            H   I + DLKPENIM+ +      HI L+DF                  LA     G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
           + +  F                                        GT E+VAPEI+  +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPL-RNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D       + + L ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+LL K+  KR+ ++E   H +   V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   DV + +  A++ +  +L ++  KEL  N           E  V+R  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 74
Query: 84  EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           ++P ++  L   L  D+     ++Y  G    SL    +E    +  I            
Sbjct: 75  KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H+  +++RD+K +NI++  +G + L DF    ++   TP+ S               +
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQS---------------K 172
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
           RS                                        VGT  ++APE++  K + 
Sbjct: 173 RS--------------------------------------EMVGTPYWMAPEVVTRKAYG 194
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
             VD WSLG++  EM+ G  P+   +     Y I       +  P  L    R+ + R L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
           + D  KR   +E+  H+F K
Sbjct: 255 DMDVEKRGSAKELLQHQFLK 274

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 76/317 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + + +  A+K+I +  +           N    +++  E R
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           + + + HP + +L  V+ T+K +    +Y  G ++             +   +F      
Sbjct: 66  IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN         +L+D D + K++                  G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADXNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                +F +K  +                                F G   Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDA--------------------------------FCGAPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L    R P      T   NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYXSTDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
           ++ L  +P+KR  +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 122/327 (37%), Gaps = 75/327 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   ++  +   +A K I       K ++   +  G     I  E  +LR V
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            H  +  L  V      V   ++   G +L     Q+ E +  ++   F           
Sbjct: 73  LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            H   I + DLKPENIM+ +      HI L+DF                  LA     G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
           + +  F                                        GT E+VAPEI+  +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPL-RNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D       + + L ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+LL K+  KR+ ++E   H +   V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGVFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F                                    GT E+VAPEI+  +    
Sbjct: 169 DFGNEF--------------------------------KNIFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 18  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 71  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 129
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 130 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 167
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 168 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 195
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 196 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 255
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 256 VKDPKKRMTIQDSLQHPWIK 275

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 127/326 (38%), Gaps = 79/326 (24%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  LG GA G V+  ++ E+S   A KVI     + KS+E        +      E  +
Sbjct: 41  IIGELGDGAFGKVYKAQNKETSVLAAAKVI-----DTKSEE--------ELEDYMVEIDI 87
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           L + +HP + +L      +  +   I++C G  + ++   + E+  ++  I+        
Sbjct: 88  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLD 146
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H+  I++RDLK  NI+   +G I L DF +S K                NTR  I
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRX-I 189
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
           ++R                                         F+GT  ++APE++   
Sbjct: 190 QRRDX---------------------------------------FIGTPYWMAPEVVMCE 210
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPL 310
             + + +D+  D WSLG+ L EM     P    +      +I    P  + +P    +  
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
           ++ +++ LEK+   R    ++  H F
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPF 296

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGKFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 18  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 71  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 129
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 130 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 167
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 168 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 195
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 196 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 255
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 256 VKDPKKRMTIQDSLQHPWIK 275

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 120/327 (36%), Gaps = 75/327 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   ++  +   +A K I       K ++   +  G     I  E  +LR V
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            H  +  L  V      V   ++   G +L     Q+ E +  ++   F           
Sbjct: 73  LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            H   I + DLKPENIM+ +      HI L+DF                  LA     G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
           + +  F                                        GT E+VAPEI+  +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D   E         ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+LL K+  KR+ ++E   H +   V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F +                                  GT E+VAPEI+  +    
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           GT E+VAPEI+  +      D WS+GV+ + +L GA+PF G +++ET   I     D   
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
           E         ++ IRRLL KDP +R+ + +   H + K +
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAI 293

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           GT E+VAPEI+  +      D WS+GV+ + +L GA+PF G +++ET   I     D   
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
           E         ++ IRRLL KDP +R+ + +   H + K +
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 124/326 (38%), Gaps = 77/326 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++   LG+GA  VV        ++ +A K+I        +K+L+  D    ++++  E R
Sbjct: 34  QLFEELGKGAFSVVRRCVKKTPTQEYAAKII-------NTKKLSARD----HQKLEREAR 82
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           + R ++HP + RL   +S + F     D   G +L       + + +S+           
Sbjct: 83  ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQIL 140
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLKPEN++                              LA+  +  
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLL------------------------------LASKCKGA 170
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
             K   F       G+++E                          F GT  Y++PE++  
Sbjct: 171 AVKLADF-------GLAIE----------------VQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------L 310
             +   VD W+ GV+L+ +L G  PF    + + + +I     D    P+P         
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF---PSPEWDTVTPEA 264
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
           +NLI ++L  +P KRI  ++   H +
Sbjct: 265 KNLINQMLTINPAKRITADQALKHPW 290

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 120/327 (36%), Gaps = 75/327 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   ++  +   +A K I       K ++   +  G     I  E  +LR V
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            H  +  L  V      V   ++   G +L     Q+ E +  ++   F           
Sbjct: 73  LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            H   I + DLKPENIM+ +      HI L+DF                  LA     G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
           + +  F                                        GT E+VAPEI+  +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D   E         ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+LL K+  KR+ ++E   H +   V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 119/329 (36%), Gaps = 78/329 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I   LG GA GVV  V +  +  +FA K +   +   +S + T          +  E + 
Sbjct: 55  IHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKET----------VRKEIQT 101
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           +  + HP L  L      D  +    ++  G +L      +  +M  D+ + +       
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 161
Query: 140 XXXXXHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                H    V+ DLKPENIM   + +  + L+DF L+  L        PK  +   T  
Sbjct: 162 LCHM-HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD-------PKQSVKVTT-- 211
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                                                           GT E+ APE+ E
Sbjct: 212 ------------------------------------------------GTAEFAAPEVAE 223
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRN 312
           GK   +  D WS+GV+ + +L G +PF G +  ET   +     ++      G     ++
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 283
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
            IR+LL  DP  R+ + +   H +    N
Sbjct: 284 FIRKLLLADPNTRMTIHQALEHPWLTPGN 312

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 120/327 (36%), Gaps = 75/327 (22%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   ++  +   +A K I       K ++   +  G     I  E  +LR V
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            H  +  L  V      V   ++   G +L     Q+ E +  ++   F           
Sbjct: 73  LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            H   I + DLKPENIM+ +      HI L+DF                  LA     G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
           + +  F                                        GT E+VAPEI+  +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D   E         ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+LL K+  KR+ ++E   H +   V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 99/256 (38%), Gaps = 56/256 (21%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG+G  G    V   E+ E   +K            EL   D  +  R    E +V+R 
Sbjct: 17  VLGKGCFGQAIKVTHRETGEVMVMK------------ELIRFDE-ETQRTFLKEVKVMRC 63
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           +EHP + +  GVL  DK + +  +Y  G  L  + K    Q      + F          
Sbjct: 64  LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
             H+M I++RDL   N +++EN ++++ DF L+  +  +  Q      L    R   KKR
Sbjct: 124 L-HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR---KKR 179
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            +                                        VG   ++APE+I G+ +D
Sbjct: 180 YT---------------------------------------VVGNPYWMAPEMINGRSYD 200
Query: 263 FAVDWWSLGVVLHEML 278
             VD +S G+VL E++
Sbjct: 201 EKVDVFSFGIVLCEII 216

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 119/321 (37%), Gaps = 74/321 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +IV  LG G    V+L +D   +   A+K I+   I  + KE T        +R   E  
Sbjct: 14  KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIF---IPPREKEET-------LKRFEREVH 63
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
               + H  +  +  V   D      ++Y  G  L      +S    S DT         
Sbjct: 64  NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQIL 121
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H+M IV+RD+KP+NI+I  N  + + DF                         G
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDF-------------------------G 156
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
           I K          S  SL    H                       +GT +Y +PE  +G
Sbjct: 157 IAK--------ALSETSLTQTNH----------------------VLGTVQYFSPEQAKG 186
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR-ILCRPPDLVGE-----PTPLRN 312
           +  D   D +S+G+VL+EML G  PF G +      + I    P++  +     P  L N
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSN 246
Query: 313 LIRRLLEKDPTKRI-GVEEIK 332
           +I R  EKD   R   ++E+K
Sbjct: 247 VILRATEKDKANRYKTIQEMK 267

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 108/280 (38%), Gaps = 71/280 (25%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   +G+G    V L + V +    A+K+I +  +           N    +++  E R
Sbjct: 18  RLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-----------NPTSLQKLFREVR 66
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++             +   +F      
Sbjct: 67  IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 126
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H   IV+RDLK EN+++  + +I + DF  S + +                   
Sbjct: 127 VQYC--HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--------------- 169
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                  L  FC                                   G+  Y APE+ +G
Sbjct: 170 -------LDTFC-----------------------------------GSPPYAAPELFQG 187
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 133/331 (40%), Gaps = 79/331 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE-KKSKELTNNDNGDKYRRISFEQR 78
           +   +G+GA  VV    + E+ + FA+K++  D+ +   S  L+  D       +  E  
Sbjct: 28  LCEVIGKGAFSVVRRCINRETGQQFAVKIV--DVAKFTSSPGLSTED-------LKREAS 78
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXX 136
           +   ++HP +  L    S+D  +    ++  G DL    +++  +  ++S+         
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                   H+  I++RD+KPEN+++   + +  + L DF ++ +L         ++ L A
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--------ESGLVA 190
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
             R G                                                T  ++AP
Sbjct: 191 GGRVG------------------------------------------------TPHFMAP 202
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK------ETFYRILCRPPDLVGEP 307
           E+++ + +   VD W  GV+L  +L G  PF G+  +      +  Y++  R    + E 
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISES 262
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              ++L+RR+L  DP +RI V E   H + K
Sbjct: 263 A--KDLVRRMLMLDPAERITVYEALNHPWLK 291

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
            GT  Y+APE+ + +   F  D WS GVV++ +L G  PF G+S +E   +   + P+  
Sbjct: 187 AGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA 245
Query: 305 GEPTPLR----NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            E  PL     +L++++L KDP +R    ++  HE+FK
Sbjct: 246 VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           GT E+VAPEI+  +      D WS+GV+ + +L GA+PF G +++ET   +     +   
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           E         ++ IRRLL KDP KR+ +++   H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 118/329 (35%), Gaps = 78/329 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I   LG GA GVV  V +  +  +FA K +   +   +S + T          +  E + 
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKET----------VRKEIQT 207
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           +  + HP L  L      D  +    ++  G +L      +  +M  D+ + +       
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 140 XXXXXHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                H    V+ DLKPENIM   + +  + L+DF L       T    PK  +   T  
Sbjct: 268 LCHM-HENNYVHLDLKPENIMFTTKRSNELKLIDFGL-------TAHLDPKQSVKVTT-- 317
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                                                           GT E+ APE+ E
Sbjct: 318 ------------------------------------------------GTAEFAAPEVAE 329
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRN 312
           GK   +  D WS+GV+ + +L G +PF G +  ET   +     ++      G     ++
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
            IR+LL  DP  R+ + +   H +    N
Sbjct: 390 FIRKLLLADPNTRMTIHQALEHPWLTPGN 418

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           GT E+VAPEI+  +      D WS+GV+ + +L GA+PF G +++ET   I     D   
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           E         ++ IRRLL KDP +R+ + +   H + K 
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKA 278

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 129/360 (35%), Gaps = 95/360 (26%)
Query: 4   VVNDRPIRSLD---FSCLR-------IVSALGRGAKGVVFLVKDVESSESFALKVIWRDL 53
           + +D P RSLD    S LR       +V  +G G  G V+  + V++ +  A+KV+    
Sbjct: 2   MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM---- 57
Query: 54  IEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-LPRLRGVL------STDKFVGYAID 106
                     +  GD+   I  E  +L+   H   +    G          D  +   ++
Sbjct: 58  ----------DVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107
Query: 107 YCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH 166
           +C    +  L K        ++ I +            H   +++RD+K +N+++ EN  
Sbjct: 108 FCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE 167
Query: 167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXX 226
           + LVDF +S +L         +TV   NT                               
Sbjct: 168 VKLVDFGVSAQLD--------RTVGRRNT------------------------------- 188
Query: 227 XXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGA 281
                            F+GT  ++APE+I         +DF  D WSLG+   EM  GA
Sbjct: 189 -----------------FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231
Query: 282 TPFRGSSRKETFYRILCRP-PDLVGE--PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            P          + I   P P L  +      ++ I   L K+ ++R   E++  H F +
Sbjct: 232 PPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 129/328 (39%), Gaps = 91/328 (27%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG G  G V + K   +    A+K++ R       +++ + D   K RR   E + L+ 
Sbjct: 23  TLGVGTFGKVKVGKHELTGHKVAVKILNR-------QKIRSLDVVGKIRR---EIQNLKL 72
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-------LRKQQSEQMFSDDTIRFXXX 135
             HP + +L  V+ST   +   ++Y  G +L         L +++S ++F          
Sbjct: 73  FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ-------- 124
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                    H   +V+RDLKPEN+++  + +  + DF L                     
Sbjct: 125 -ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL--------------------- 162
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
            S +     FL   C                                   G+  Y APE+
Sbjct: 163 -SNMMSDGEFLRXSC-----------------------------------GSPNYAAPEV 186
Query: 256 IEGKGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR--- 311
           I G+ +    VD WS GV+L+ +L G  PF       T ++ +C    +   P  L    
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKICD--GIFYTPQYLNPSV 243
Query: 312 -NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            +L++ +L+ DP KR  +++I+ HE+FK
Sbjct: 244 ISLLKHMLQVDPMKRATIKDIREHEWFK 271

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 67/320 (20%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I       K +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP +  L  V      V   ++   G +L     ++ E +  ++   F           
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H++ I + DLKPENI        ML+D ++        P+   K +       G+  + 
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F ++F                                    GT  +VAPEI+  +    
Sbjct: 169 DFGNEF--------------------------------KNIFGTPAFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
             D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            KDP KR+ +++   H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 122/319 (38%), Gaps = 70/319 (21%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR-ISFEQRV 79
           V  LG GA G V L K+       A+KVI +   +K  +   +N N +K+   I  E  +
Sbjct: 41  VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDK-GRYSDDNKNIEKFHEEIYNEISL 99
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           L++++HP + +L  V    K+     ++  G +L    +  +   F +            
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKFDECDAANIMKQILS 157
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENG---HIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
                H   IV+RD+KPENI+++      +I +VDF L                      
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL---------------------- 195
Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII 256
                     S F S    L D +                         GT  Y+APE++
Sbjct: 196 ----------SSFFSKDYKLRDRL-------------------------GTAYYIAPEVL 220
Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCRPPDLVGEPTPLR 311
           + K ++   D WS GV+++ +L G  PF G + ++   ++          D        +
Sbjct: 221 KKKYNE-KCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK 279
Query: 312 NLIRRLLEKDPTKRIGVEE 330
            LI+ +L  D  KR   EE
Sbjct: 280 ELIKLMLTYDYNKRCTAEE 298

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 134/371 (36%), Gaps = 100/371 (26%)
Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +D    + V  +G G  GVV+  ++  + E  ALK I  D         T        R 
Sbjct: 4   VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIRE 56
Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           IS    +L+ + HP + +L  V+ T+  +    ++   +DL       +        I+ 
Sbjct: 57  IS----LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 111
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                       H+  +++RDLKP+N++I   G I L DF L+                 
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA----------------- 154
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
                     R+F       G+ +    H                       V T  Y A
Sbjct: 155 ----------RAF-------GVPVRTYTHE----------------------VVTLWYRA 175
Query: 253 PEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP-- 307
           PEI+ G K +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P  
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 308 ----------------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                                  PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
Query: 342 WEL-LLKISRP 351
             +  L++ RP
Sbjct: 296 KPVPHLRLERP 306

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA  VV       +   FA K+I        +K+L+  D    ++++  E R+ R +
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKII-------NTKKLSARD----FQKLEREARICRKL 62
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP + RL   +  + F     D   G +L       + + +S+                
Sbjct: 63  QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 120
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H+ GIV+R+LKPEN++                              LA+  +    K  
Sbjct: 121 CHSNGIVHRNLKPENLL------------------------------LASKAKGAAVKLA 150
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F       G+++E                          F GT  Y++PE+++   +  
Sbjct: 151 DF-------GLAIE-----------------VNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
            VD W+ GV+L+ +L G  PF    +   + +I     D    P+P         ++LI 
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLID 243
Query: 316 RLLEKDPTKRIGVEE 330
            +L  +P KRI  ++
Sbjct: 244 SMLTVNPKKRITADQ 258

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA  VV       +   FA K+I        +K+L+  D    ++++  E R+ R +
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKII-------NTKKLSARD----FQKLEREARICRKL 62
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP + RL   +  + F     D   G +L       + + +S+                
Sbjct: 63  QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 120
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H+ GIV+R+LKPEN++                              LA+  +    K  
Sbjct: 121 CHSNGIVHRNLKPENLL------------------------------LASKAKGAAVKLA 150
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F       G+++E                          F GT  Y++PE+++   +  
Sbjct: 151 DF-------GLAIE-----------------VNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
            VD W+ GV+L+ +L G  PF    +   + +I     D    P+P         ++LI 
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLID 243
Query: 316 RLLEKDPTKRIGVEE 330
            +L  +P KRI  ++
Sbjct: 244 SMLTVNPKKRITADQ 258

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA  VV       +   FA K+I        +K+L+  D    ++++  E R+ R +
Sbjct: 13  LGKGAFSVVRRCVHKTTGLEFAAKII-------NTKKLSARD----FQKLEREARICRKL 61
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP + RL   +  + F     D   G +L       + + +S+                
Sbjct: 62  QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 119
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H+ GIV+R+LKPEN++                              LA+  +    K  
Sbjct: 120 CHSNGIVHRNLKPENLL------------------------------LASKAKGAAVKLA 149
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F       G+++E                          F GT  Y++PE+++   +  
Sbjct: 150 DF-------GLAIE-----------------VNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
            VD W+ GV+L+ +L G  PF    +   + +I     D    P+P         ++LI 
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLID 242
Query: 316 RLLEKDPTKRIGVEE 330
            +L  +P KRI  ++
Sbjct: 243 SMLTVNPKKRITADQ 257

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 126/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL +     +        I+         
Sbjct: 56  KELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 149
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 150 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA  VV       +   FA K+I        +K+L+  D    ++++  E R+ R +
Sbjct: 37  LGKGAFSVVRRCVHKTTGLEFAAKII-------NTKKLSARD----FQKLEREARICRKL 85
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP + RL   +  + F     D   G +L       + + +S+                
Sbjct: 86  QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 143
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H+ GIV+R+LKPEN+                              +LA+  +    K  
Sbjct: 144 CHSNGIVHRNLKPENL------------------------------LLASKAKGAAVKLA 173
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
            F       G+++E                          F GT  Y++PE+++   +  
Sbjct: 174 DF-------GLAIE-----------------VNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
            VD W+ GV+L+ +L G  PF    +   + +I     D    P+P         ++LI 
Sbjct: 210 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLID 266
Query: 316 RLLEKDPTKRIGVEE 330
            +L  +P KRI  ++
Sbjct: 267 SMLTVNPKKRITADQ 281

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 56  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 149
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 150 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/318 (20%), Positives = 125/318 (39%), Gaps = 76/318 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V L ++  S    A+K++  DL +++ +EL  N           E  ++R+ 
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFN-----------EVVIMRDY 99
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  +  +       + +   +++  G  L  +  Q      +++ I             
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAY 156
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H  G+++RD+K ++I++  +G + L DF                    A     + KR+
Sbjct: 157 LHAQGVIHRDIKSDSILLTLDGRVKLSDFGF-----------------CAQISKDVPKRK 199
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                                                    VGT  ++APE+I    +  
Sbjct: 200 XL---------------------------------------VGTPYWMAPEVISRSLYAT 220
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG---EPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+   S  +   R+   PP  +    + +P LR+ + R+L 
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV 280
Query: 320 KDPTKRIGVEEIKGHEFF 337
           +DP +R   +E+  H F 
Sbjct: 281 RDPQERATAQELLDHPFL 298

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 119/326 (36%), Gaps = 81/326 (24%)
Query: 22  SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR 81
           S LGRGA  +V+  K   + + +ALKV+ +  ++KK               +  E  VL 
Sbjct: 59  SELGRGATSIVYRCKQKGTQKPYALKVL-KKTVDKKI--------------VRTEIGVLL 103
Query: 82  NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS--LRKQQSEQMFSDDTIRFXXXXXXX 139
            + HP + +L+ +  T   +   ++   G +L    + K    +  + D ++        
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK----QILE 159
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H  GIV+RDLKPEN++                     TP       +A    S I
Sbjct: 160 AVAYLHENGIVHRDLKPENLLYA-------------------TPAPDAPLKIADFGLSKI 200
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
            + +  +   C                                   GT  Y APEI+ G 
Sbjct: 201 VEHQVLMKTVC-----------------------------------GTPGYCAPEILRGC 225
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP------TPLRNL 313
            +   VD WS+G++ + +L G  PF      +  +R +         P         ++L
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL 285
Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKG 339
           +R+L+  DP KR+   +   H +  G
Sbjct: 286 VRKLIVLDPKKRLTTFQALQHPWVTG 311

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 15  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 63
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 64  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 157
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 158 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 186
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 151
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 152 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 56  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 149
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 150 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGXK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 15  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 63
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 64  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 157
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 158 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGXK 186
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEGK HD  VD W  GV+ +E L G  PF   S  ET  RI+    + 
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           P  + + +  ++LI +LL   P +R+ ++ +  H + K 
Sbjct: 232 PPFLSDGS--KDLISKLLRYHPPQRLPLKGVMEHPWVKA 268

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
             GT +Y+ PE+IEGK HD  VD W  GV+ +E L G  PF   S  ET  RI+    + 
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 232
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           P  + + +  ++LI +LL   P +R+ ++ +  H + K 
Sbjct: 233 PPFLSDGS--KDLISKLLRYHPPQRLPLKGVMEHPWVKA 269

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 127/326 (38%), Gaps = 81/326 (24%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-R 81
            LG+G  G+V+  +D+ +    A+K            E+   D+  +Y +   E+  L +
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIK------------EIPERDS--RYSQPLHEEIALHK 74
Query: 82  NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL-RKQQSEQMFSDDTIRFXXXXXXXX 140
           +++H  + +  G  S + F+   ++  PG  L +L R +      ++ TI F        
Sbjct: 75  HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  IV+RD+K +N++I                                NT SG+ 
Sbjct: 135 LKYLHDNQIVHRDIKGDNVLI--------------------------------NTYSGVL 162
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-- 258
           K   F +    +GI   +P                        F GT +Y+APEII+   
Sbjct: 163 KISDFGTSKRLAGI---NPC--------------------TETFTGTLQYMAPEIIDKGP 199
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPF------RGSSRKETFYRILCRPPDLVGEPTPLRN 312
           +G+  A D WSLG  + EM  G  PF      + +  K   +++    P+ +      + 
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEA--KA 257
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFK 338
            I +  E DP KR    ++   EF K
Sbjct: 258 FILKCFEPDPDKRACANDLLVDEFLK 283

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 127/326 (38%), Gaps = 81/326 (24%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-R 81
            LG+G  G+V+  +D+ +    A+K            E+   D+  +Y +   E+  L +
Sbjct: 15  VLGKGTYGIVYAGRDLSNQVRIAIK------------EIPERDS--RYSQPLHEEIALHK 60
Query: 82  NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL-RKQQSEQMFSDDTIRFXXXXXXXX 140
           +++H  + +  G  S + F+   ++  PG  L +L R +      ++ TI F        
Sbjct: 61  HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  IV+RD+K +N++I                                NT SG+ 
Sbjct: 121 LKYLHDNQIVHRDIKGDNVLI--------------------------------NTYSGVL 148
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-- 258
           K   F +    +GI   +P                        F GT +Y+APEII+   
Sbjct: 149 KISDFGTSKRLAGI---NPC--------------------TETFTGTLQYMAPEIIDKGP 185
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPF------RGSSRKETFYRILCRPPDLVGEPTPLRN 312
           +G+  A D WSLG  + EM  G  PF      + +  K   +++    P+ +      + 
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEA--KA 243
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFK 338
            I +  E DP KR    ++   EF K
Sbjct: 244 FILKCFEPDPDKRACANDLLVDEFLK 269

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 125/326 (38%), Gaps = 70/326 (21%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELT--------NNDNGDKYRR 72
           ++ LG+GA G V   ++   S  +A+K I R   EK S  L+        N+    +Y  
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E+R   N   P+       +     +   ++YC  R L+ L   ++     D+  R 
Sbjct: 70  AWLERR---NFVKPM-----TAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                       H+ GI++RDLKP NI I E+ ++ + DF                  LA
Sbjct: 122 FRQILEALSYI-HSQGIIHRDLKPMNIFIDESRNVKIGDFG-----------------LA 163
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
            N    +   +        S  +L   +                         GT  YVA
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI-------------------------GTAMYVA 198
Query: 253 PEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGE 306
            E+++G GH +  +D +SLG++  EM+Y   PF     +    + L       PPD    
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 307 PTPL-RNLIRRLLEKDPTKRIGVEEI 331
              + + +IR L++ DP KR G   +
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTL 281

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
           I+  +G G    VF V + E  + +A+K +        + E  +N   D YR  I++  +
Sbjct: 16  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 66
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
           + ++ +  +  RL     TD+++ Y +  C   DL+S L+K++S   +   +        
Sbjct: 67  LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 120
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H  GIV+ DLKP N +I + G + L+DF ++ ++ P             +T S
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 166
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            +K  +                                         VGT  Y+ PE I+
Sbjct: 167 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 185
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
                              D WSLG +L+ M YG TPF+    + +    +  P   +  
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 245
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P      L+++++  L++DP +RI + E+  H + +
Sbjct: 246 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEIXI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPL-A 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
           I+  +G G    VF V + E  + +A+K +        + E  +N   D YR  I++  +
Sbjct: 60  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 110
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
           + ++ +  +  RL     TD+++ Y +  C   DL+S L+K++S   +     +      
Sbjct: 111 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNM 164
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H  GIV+ DLKP N +I + G + L+DF ++ ++ P             +T S
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 210
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            +K  +                                         VGT  Y+ PE I+
Sbjct: 211 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 229
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
                              D WSLG +L+ M YG TPF+    + +    +  P   +  
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P      L+++++  L++DP +RI + E+  H + +
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
           I+  +G G    VF V + E  + +A+K +        + E  +N   D YR  I++  +
Sbjct: 32  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 82
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
           + ++ +  +  RL     TD+++ Y +  C   DL+S L+K++S   +   +        
Sbjct: 83  LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 136
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H  GIV+ DLKP N +I + G + L+DF ++ ++ P             +T S
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 182
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            +K  +                                         VGT  Y+ PE I+
Sbjct: 183 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 201
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
                              D WSLG +L+ M YG TPF+    + +    +  P   +  
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P      L+++++  L++DP +RI + E+  H + +
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAAGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
           I+  +G G    VF V + E  + +A+K +        + E  +N   D YR  I++  +
Sbjct: 12  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 62
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
           + ++ +  +  RL     TD+++ Y +  C   DL+S L+K++S   +   +        
Sbjct: 63  LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 116
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H  GIV+ DLKP N +I + G + L+DF ++ ++ P             +T S
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 162
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            +K  +                                         VGT  Y+ PE I+
Sbjct: 163 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 181
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
                              D WSLG +L+ M YG TPF+    + +    +  P   +  
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 241
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P      L+++++  L++DP +RI + E+  H + +
Sbjct: 242 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
           I+  +G G    VF V + E  + +A+K +        + E  +N   D YR  I++  +
Sbjct: 13  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 63
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
           + ++ +  +  RL     TD+++ Y +  C   DL+S L+K++S   +   +        
Sbjct: 64  LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 117
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H  GIV+ DLKP N +I + G + L+DF ++ ++ P             +T S
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 163
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            +K  +                                         VGT  Y+ PE I+
Sbjct: 164 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 182
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
                              D WSLG +L+ M YG TPF+    + +    +  P   +  
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 242
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P      L+++++  L++DP +RI + E+  H + +
Sbjct: 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 124/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  AL  I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALXKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 124/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  AL  I  D         T        R IS    +L
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALXKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 56  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G I L DF L+                         
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 149
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       G+ +    H                       V T  Y APEI+ G K
Sbjct: 150 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N     
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNN---- 159
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
             R   L+K C                                   GT  YVAPE+++ +
Sbjct: 160 --RERLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/319 (21%), Positives = 125/319 (39%), Gaps = 76/319 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +  +  + +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 53  IGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 99
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            H  +  +         +   +++  G  L  +    +    +++ I             
Sbjct: 100 HHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIATVCLSVLRALSY 156
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            HN G+++RD+K ++I++  +G I L DF                               
Sbjct: 157 LHNQGVIHRDIKSDSILLTSDGRIKLSDFG------------------------------ 186
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                FC+  +S E P                         VGT  ++APE+I    +  
Sbjct: 187 -----FCAQ-VSKEVP--------------------KRKXLVGTPYWMAPEVISRLPYGT 220
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPP---DLVGEPTPLRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +   RI    PP   DL    + LR  +  +L 
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 320 KDPTKRIGVEEIKGHEFFK 338
           ++P++R   +E+ GH F K
Sbjct: 281 REPSQRATAQELLGHPFLK 299

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
           +GT  Y+APE++  K +D   D WS GV+L+ +L G  PF G + +E   R+        
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
           PPD        + L++ +L  +P+KRI  EE   H
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNH 277

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
           I+  +G G    VF V + E  + +A+K +        + E  +N   D YR  I++  +
Sbjct: 60  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 110
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
           + ++ +  +  RL     TD+++ Y +  C   DL+S L+K++S   +     +      
Sbjct: 111 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNM 164
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H  GIV+ DLKP N +I + G + L+DF ++ ++ P             +T S
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 210
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            +K  +                                         VGT  Y+ PE I+
Sbjct: 211 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 229
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
                              D WSLG +L+ M YG TPF+    + +    +  P   +  
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P      L+++++  L++DP +RI + E+  H + +
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N     
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNN---- 158
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
             R   L+K C                                   GT  YVAPE+++ +
Sbjct: 159 --RERLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG GA G V L  + ++ +  A+K+I      K+   + +    D    +  E  +L+ 
Sbjct: 17  TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           + HP + +++     + +    ++   G +L    K    +   + T +           
Sbjct: 72  LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
             H  GI++RDLKPEN+++   +E+  I + DF                        S I
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 166
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 167 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 191
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
              G++ AVD WSLGV+L   L G  PF     + +         Y  +   P++  E +
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 248
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
               +L+++LL  DP  R   EE   H + +
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG GA G V L  + ++ +  A+K+I      K+   + +    D    +  E  +L+ 
Sbjct: 16  TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 70
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           + HP + +++     + +    ++   G +L    K    +   + T +           
Sbjct: 71  LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
             H  GI++RDLKPEN+++   +E+  I + DF                        S I
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 165
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 166 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 190
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
              G++ AVD WSLGV+L   L G  PF     + +         Y  +   P++  E +
Sbjct: 191 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 247
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
               +L+++LL  DP  R   EE   H + +
Sbjct: 248 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 9   LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 56
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 57  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 115
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 116 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 159
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 160 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 180
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPL-A 238
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 239 LLHKILVENPSARITIPDIKKDRWY 263

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG GA G V L  + ++ +  A+K+I      K+   + +    D    +  E  +L+ 
Sbjct: 23  TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 77
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           + HP + +++     + +    ++   G +L    K    +   + T +           
Sbjct: 78  LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
             H  GI++RDLKPEN+++   +E+  I + DF                        S I
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 172
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 173 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 197
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
              G++ AVD WSLGV+L   L G  PF     + +         Y  +   P++  E +
Sbjct: 198 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 254
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
               +L+++LL  DP  R   EE   H + +
Sbjct: 255 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG GA G V L  + ++ +  A+K+I      K+   + +    D    +  E  +L+ 
Sbjct: 17  TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           + HP + +++     + +    ++   G +L    K    +   + T +           
Sbjct: 72  LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
             H  GI++RDLKPEN+++   +E+  I + DF                        S I
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 166
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 167 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 191
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
              G++ AVD WSLGV+L   L G  PF     + +         Y  +   P++  E +
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 248
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
               +L+++LL  DP  R   EE   H + +
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG GA G V L  + ++ +  A+K+I      K+   + +    D    +  E  +L+ 
Sbjct: 17  TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           + HP + +++     + +    ++   G +L    K    +   + T +           
Sbjct: 72  LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
             H  GI++RDLKPEN+++   +E+  I + DF                        S I
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 166
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 167 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 191
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
              G++ AVD WSLGV+L   L G  PF     + +         Y  +   P++  E +
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 248
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
               +L+++LL  DP  R   EE   H + +
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R   
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
                 L+K C                                   GT  YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 64/214 (29%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
           H  G ++RD+K  NI++ E+G + + DF +S  L+               TR+ ++K   
Sbjct: 138 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG----------GDITRNKVRK--- 184
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHDF 263
                                                  FVGT  ++APE++E  +G+DF
Sbjct: 185 --------------------------------------TFVGTPCWMAPEVMEQVRGYDF 206
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL---VGEPTPL-------RN 312
             D WS G+   E+  GA P+      +     L   PP L   V +   L       R 
Sbjct: 207 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 266
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF-KGVNWELL 345
           +I   L+KDP KR    E+  H+FF K  N E L
Sbjct: 267 MISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFL 300

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 124/322 (38%), Gaps = 79/322 (24%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG G  G V + +   +    A+K++ R    +K + L      D   +I  E + L+ 
Sbjct: 18  TLGVGTFGKVKIGEHQLTGHKVAVKILNR----QKIRSL------DVVGKIKREIQNLKL 67
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXX 140
             HP + +L  V+ST       ++Y  G +L  +  +  + E+M +    R         
Sbjct: 68  FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----RRLFQQILSA 123
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H   +V+RDLKPEN+++  + +  + DF L                          
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL-------------------------- 157
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
                 S   S G  L D                           G+  Y APE+I G+ 
Sbjct: 158 ------SNMMSDGEFLRDSC-------------------------GSPNYAAPEVISGRL 186
Query: 261 HDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGEPTPLRNLIRR 316
           +    VD WS GV+L+ +L G  PF        F +I   +   P+ +        L+  
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA--TLLMH 244
Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
           +L+ DP KR  +++I+ HE+FK
Sbjct: 245 MLQVDPLKRATIKDIREHEWFK 266

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 124/322 (38%), Gaps = 79/322 (24%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG G  G V + +   +    A+K++ R    +K + L      D   +I  E + L+ 
Sbjct: 18  TLGVGTFGKVKIGEHQLTGHKVAVKILNR----QKIRSL------DVVGKIKREIQNLKL 67
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXX 140
             HP + +L  V+ST       ++Y  G +L  +  +  + E+M +    R         
Sbjct: 68  FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----RRLFQQILSA 123
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H   +V+RDLKPEN+++  + +  + DF L                      S + 
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL----------------------SNMM 161
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
               FL   C                                   G+  Y APE+I G+ 
Sbjct: 162 SDGEFLRTSC-----------------------------------GSPNYAAPEVISGRL 186
Query: 261 HDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGEPTPLRNLIRR 316
           +    VD WS GV+L+ +L G  PF        F +I   +   P+ +        L+  
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA--TLLMH 244
Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
           +L+ DP KR  +++I+ HE+FK
Sbjct: 245 MLQVDPLKRATIKDIREHEWFK 266

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG GA G V L  + ++ +  A+++I      K+   + +    D    +  E  +L+ 
Sbjct: 156 TLGSGACGEVKLAFERKTCKKVAIRII-----SKRKFAIGSAREADPALNVETEIEILKK 210
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           + HP + +++     + +    ++   G +L    K    +   + T +           
Sbjct: 211 LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
             H  GI++RDLKPEN+++   +E+  I + DF                        S I
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 305
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 306 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 330
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
              G++ AVD WSLGV+L   L G  PF     + +         Y  +   P++  E +
Sbjct: 331 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 387
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
               +L+++LL  DP  R   EE   H + +
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 126/330 (38%), Gaps = 87/330 (26%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVI----WRDLIEKKSKELTNNDNGDKYRRISF 75
           +V  LG GA G V L  +  + E+ A+K++      D  E   KE+  N   +    + F
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKF 70
Query: 76  E-QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
              R   N+++  L                 +YC G +L   R +    M   D  RF  
Sbjct: 71  YGHRREGNIQYLFL-----------------EYCSGGELFD-RIEPDIGMPEPDAQRFFH 112
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
                     H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N
Sbjct: 113 QLMAGVVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYN 158
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
            R         L+K C                                   GT  YVAPE
Sbjct: 159 NRE------RLLNKMC-----------------------------------GTLPYVAPE 177
Query: 255 IIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEP 307
           +++ +  H   VD WS G+VL  ML G  P+   S     Y      +    P   + + 
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DS 236
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
            PL  L+ ++L ++P+ RI + +IK   ++
Sbjct: 237 APLA-LLHKILVENPSARITIPDIKKDRWY 265

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 63/206 (30%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
           H  G ++RD+K  NI++ E+G + + DF +S  L+               TR+ ++K   
Sbjct: 133 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG----------GDITRNKVRK--- 179
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHDF 263
                                                  FVGT  ++APE++E  +G+DF
Sbjct: 180 --------------------------------------TFVGTPCWMAPEVMEQVRGYDF 201
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL---VGEPTPL-------RN 312
             D WS G+   E+  GA P+      +     L   PP L   V +   L       R 
Sbjct: 202 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 261
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFK 338
           +I   L+KDP KR    E+  H+FF+
Sbjct: 262 MISLCLQKDPEKRPTAAELLRHKFFQ 287

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            LG GA G V L  + ++ +  A+++I      K+   + +    D    +  E  +L+ 
Sbjct: 142 TLGSGACGEVKLAFERKTCKKVAIRII-----SKRKFAIGSAREADPALNVETEIEILKK 196
Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
           + HP + +++     + +    ++   G +L    K    +   + T +           
Sbjct: 197 LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
             H  GI++RDLKPEN+++   +E+  I + DF                        S I
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 291
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 292 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 316
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
              G++ AVD WSLGV+L   L G  PF     + +         Y  +   P++  E +
Sbjct: 317 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 373
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
               +L+++LL  DP  R   EE   H + +
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 133/336 (39%), Gaps = 87/336 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
           I+  +G G    VF V + E  + +A+K +        + E  +N   D YR  I++  +
Sbjct: 60  ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 110
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
           + ++ +  +  RL     TD+++ Y +  C   DL+S L+K++S   +     +      
Sbjct: 111 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNM 164
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                  H  GIV+ DLKP N +I + G + L+DF ++ ++ P             +T S
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 210
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            +K  +                                         VG   Y+ PE I+
Sbjct: 211 VVKDSQ-----------------------------------------VGAVNYMPPEAIK 229
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
                              D WSLG +L+ M YG TPF+    + +    +  P   +  
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P      L+++++  L++DP +RI + E+  H + +
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/331 (21%), Positives = 114/331 (34%), Gaps = 90/331 (27%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 30  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 77
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 78  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 137
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++   G I                              
Sbjct: 138 YLREKHK----IMHRDVKPSNILVNSRGEI------------------------------ 163
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                     K C  G+S +                          FVGT  Y++PE ++
Sbjct: 164 ----------KLCDFGVSGQ------------------LIDSMANSFVGTRSYMSPERLQ 195
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-------- 309
           G  +    D WS+G+ L EM  G  P    S     + +L     +V EP P        
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL---DYIVNEPPPKLPSGVFS 252
Query: 310 --LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              ++ + + L K+P +R  ++++  H F K
Sbjct: 253 LEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 62/272 (22%)
Query: 72  RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           R   E  ++++++HP + RL      +  +   ++ C G +L    +   +++F +    
Sbjct: 69  RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAA 126
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
                        H + + +RDLKPEN +        L D       SP +P       L
Sbjct: 127 RIMKDVLSAVAYCHKLNVAHRDLKPENFLF-------LTD-------SPDSPLKLIDFGL 172
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
           AA  + G   R                                          VGT  YV
Sbjct: 173 AARFKPGKMMRTK----------------------------------------VGTPYYV 192
Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI----LCRP-PDLVGE 306
           +P+++EG  +    D WS GV+++ +L G  PF   +  E   +I       P  D +  
Sbjct: 193 SPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV 251
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                +LIRRLL K P +RI   +   HE+F+
Sbjct: 252 SPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 62/272 (22%)
Query: 72  RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           R   E  ++++++HP + RL      +  +   ++ C G +L    +   +++F +    
Sbjct: 52  RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAA 109
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
                        H + + +RDLKPEN +        L D       SP +P       L
Sbjct: 110 RIMKDVLSAVAYCHKLNVAHRDLKPENFLF-------LTD-------SPDSPLKLIDFGL 155
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
           AA  + G   R                                          VGT  YV
Sbjct: 156 AARFKPGKMMRTK----------------------------------------VGTPYYV 175
Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI----LCRP-PDLVGE 306
           +P+++EG  +    D WS GV+++ +L G  PF   +  E   +I       P  D +  
Sbjct: 176 SPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV 234
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                +LIRRLL K P +RI   +   HE+F+
Sbjct: 235 SPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELT--------NNDNGDKYRR 72
           ++ LG+GA G V   ++   S  +A+K I R   EK S  L+        N+    +Y  
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E+R   N   P+       +     +   ++YC    L+ L   ++     D+  R 
Sbjct: 70  AWLERR---NFVKPM-----TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                       H+ GI++RDLKP NI I E+ ++ + DF                  LA
Sbjct: 122 FRQILEALSYI-HSQGIIHRDLKPMNIFIDESRNVKIGDFG-----------------LA 163
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
            N    +   +        S  +L   +                         GT  YVA
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI-------------------------GTAMYVA 198
Query: 253 PEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGE 306
            E+++G GH +  +D +SLG++  EM+Y   PF     +    + L       PPD    
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 307 PTPL-RNLIRRLLEKDPTKRIGVEEI 331
              + + +IR L++ DP KR G   +
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTL 281

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCRPPDL 303
           T  +VAPE++E +G+D A D WSLGV+L+ ML G TPF      + +E   RI      L
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 304 VG-----EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELL 345
            G          ++L+ ++L  DP +R+    +  H +   V+W+ L
Sbjct: 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI--VHWDQL 287

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 108/289 (37%), Gaps = 68/289 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG+GA G+V+   D  + E  A+K I+                 D ++  +  QR 
Sbjct: 13  LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-----------------DAFQNSTDAQRT 55
Query: 80  LRNVE-------HPLLPRLRGVL--STDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
            R +        H  +  L  VL    D+ V    DY    DLH+ +R    E +     
Sbjct: 56  FREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHK--- 111
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
            ++            H+ G+++RD+KP NI++    H+ + DF LS              
Sbjct: 112 -QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS-------------- 156
Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
                 RS +  RR       ++ I L                           +V T  
Sbjct: 157 ------RSFVNIRR------VTNNIPLS---------INENTENFDDDQPILTDYVATRW 195
Query: 250 YVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
           Y APEI+ G   +   +D WSLG +L E+L G   F GSS      RI+
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 115/339 (33%), Gaps = 100/339 (29%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 11  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++   G I                              
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEI------------------------------ 144
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
                     K C  G+S +                          FVGT  Y++PE ++
Sbjct: 145 ----------KLCDFGVSGQ------------------LIDSMANSFVGTRSYMSPERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--------DLVGEPTP 309
           G  +    D WS+G+ L EM  G  P      KE       RPP         +V EP P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED-----SRPPMAIFELLDYIVNEPPP 231
Query: 310 ----------LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                      ++ + + L K+P +R  ++++  H F K
Sbjct: 232 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R  +
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
             +                                           GT  YVAPE+++ +
Sbjct: 163 LNK-----------------------------------------MXGTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 130/346 (37%), Gaps = 101/346 (29%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G  GVV+  ++    E+FALK I           L   D G     I  E  +L+ +
Sbjct: 10  IGEGTYGVVYKAQN-NYGETFALKKI----------RLEKEDEGIPSTTIR-EISILKEL 57
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  + +L  V+ T K +    ++   +DL  L     E      T +            
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H+  +++RDLKP+N++I   G + + DF L+                           R
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLA---------------------------R 148
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHD 262
           +F       GI +    H                       V T  Y AP+++ G K + 
Sbjct: 149 AF-------GIPVRKYTHE----------------------VVTLWYRAPDVLMGSKKYS 179
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRP-----PDL----------- 303
             +D WS+G +  EM+ GA  F G S  +     +RIL  P     P++           
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 304 VGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           V EP P             +L+ ++L+ DP +RI  ++   H +FK
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEIXI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R  +
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
             +                                           GT  YVAPE+++ +
Sbjct: 163 LNK-----------------------------------------MXGTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEIXI 58
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 59  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R  +
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 163
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
             +                                           GT  YVAPE+++ +
Sbjct: 164 LNK-----------------------------------------MXGTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 122/336 (36%), Gaps = 78/336 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  LG GA GVV    +  +   F  K I                  DKY  +  E  +
Sbjct: 55  ILEELGSGAFGVVHRCVEKATGRVFVAKFI------------NTPYPLDKYT-VKNEISI 101
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           +  + HP L  L         +   +++  G +L      +  +M   + I +       
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 140 XXXXXHNMGIVYRDLKPENIMIQ--ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                H   IV+ D+KPENIM +  +   + ++DF L+TKL+P                 
Sbjct: 162 LKHM-HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--------------- 205
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            I K  +  ++F +  I   +PV                                     
Sbjct: 206 -IVKVTTATAEFAAPEIVDREPV------------------------------------- 227
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCR---PPDLVGEPTP-LRN 312
                F  D W++GV+ + +L G +PF G    ET   +  C      D     +P  ++
Sbjct: 228 ----GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKI 348
            I+ LL+K+P KR+ V +   H + KG +  L  +I
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRI 319

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 126/340 (37%), Gaps = 79/340 (23%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD-KYRRISFEQRV 79
           +S LG GA G V+   D E ++   +K I      KK K L +    D K  +++ E  +
Sbjct: 29  MSPLGSGAFGFVWTAVDKEKNKEVVVKFI------KKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAID-YCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           L  VEH  + ++  +     F    ++ +  G DL +   +       +    +      
Sbjct: 83  LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIFRQLV 140
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                     I++RD+K ENI+I E+  I L+DF  +  L                    
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL-------------------- 180
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
             +R      FC                                   GT EY APE++ G
Sbjct: 181 --ERGKLFYTFC-----------------------------------GTIEYCAPEVLMG 203
Query: 259 KGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRL 317
             +    ++ WSLGV L+ +++   PF      E        PP LV +   L +L+  L
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENPF---CELEETVEAAIHPPYLVSK--ELMSLVSGL 258
Query: 318 LEKDPTKRIGVEEIKGHEF------FKGVNWELLLKISRP 351
           L+  P +R  +E++    +           WE + ++++P
Sbjct: 259 LQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKP 298

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G   LVK  E    + +K I    +  K +E +        RR   E  VL N+
Sbjct: 32  IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES--------RR---EVAVLANM 80
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +HP + + R     +  +   +DYC G DL      Q   +F +D I             
Sbjct: 81  KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
            H+  I++RD+K +NI + ++G + L DF ++  L+
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--PPD 302
           +GT  Y++PEI E K ++   D W+LG VL+E+      F   S K    +I+    PP 
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV 245
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
            +     LR+L+ +L +++P  R  V  I
Sbjct: 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/327 (20%), Positives = 121/327 (37%), Gaps = 77/327 (23%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++   LG+GA  VV     V + + +A  +I        +K+L+  D    ++++  E R
Sbjct: 14  QLFEELGKGAFSVVRRCVKVLAGQEYAAMII-------NTKKLSARD----HQKLEREAR 62
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           + R ++HP + RL   +S +       D   G +L       + + +S+           
Sbjct: 63  ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQIL 120
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
                 H MG+V+R+LK                               P+ +L A+   G
Sbjct: 121 EAVLHCHQMGVVHRNLK-------------------------------PENLLLASKLKG 149
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
                    K    G+++E                          F GT  Y++PE++  
Sbjct: 150 AA------VKLADFGLAIE----------------VEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------L 310
             +   VD W+ GV+L+ +L G  PF    +   + +I     D    P+P         
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF---PSPEWDTVTPEA 244
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           ++LI ++L  +P+KRI   E   H + 
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWI 271

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R  +
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
             +                                           GT  YVAPE+++ +
Sbjct: 163 LNK-----------------------------------------MXGTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPL-A 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LG GA G V L  +  + E+ A+K++  D+  K++ +   N        I  E  +
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            + + H  + +  G           ++YC G +L   R +    M   D  RF       
Sbjct: 58  NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H +GI +RD+KPEN+++ E  ++ + DF L+             TV   N R  +
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
             +                                           GT  YVAPE+++ +
Sbjct: 163 LNK-----------------------------------------MXGTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
             H   VD WS G+VL  ML G  P+   S     Y      +    P   + +  PL  
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
           L+ ++L ++P+ RI + +IK   ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 122/331 (36%), Gaps = 80/331 (24%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           ++ LG+GA G V   ++   S  +A+K I R   EK S  L+             E  +L
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILS-------------EVXLL 56
Query: 81  RNVEHPLLPRLRGV-LSTDKFVG------------YAIDYCPGRDLHSLRKQQSEQMFSD 127
            ++ H  + R     L    FV                +YC  R L+ L   ++     D
Sbjct: 57  ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
           +  R             H+ GI++R+LKP NI I E+ ++ + DF               
Sbjct: 117 EYWRLFRQILEALSYI-HSQGIIHRNLKPXNIFIDESRNVKIGDFG-------------- 161
Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGT 247
              LA N    +   +        S  +L   +                         GT
Sbjct: 162 ---LAKNVHRSLDILKLDSQNLPGSSDNLTSAI-------------------------GT 193
Query: 248 EEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PP 301
             YVA E+++G GH +  +D +SLG++  E +Y   PF     +    + L       PP
Sbjct: 194 AXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSIEFPP 250
Query: 302 DLVGEPTPL-RNLIRRLLEKDPTKRIGVEEI 331
           D       + + +IR L++ DP KR G   +
Sbjct: 251 DFDDNKXKVEKKIIRLLIDHDPNKRPGARTL 281

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 107/295 (36%), Gaps = 81/295 (27%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
           V+ +G GA G V+  +D  S    ALK          S  + N + G      R ++  +
Sbjct: 9   VAEIGVGAYGTVYKARDPHSGHFVALK----------SVRVPNGEEGLPISTVREVALLR 58
Query: 78  RVLRNVEHPLLPRLRGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           R L   EHP + RL  V +T +      V    ++   +DL +   +        +TI+ 
Sbjct: 59  R-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
                       H   IV+RDLKPENI++   G + L DF                    
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG------------------- 157
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
                        L++  S  ++L DPV                        V T  Y A
Sbjct: 158 -------------LARIYSYQMAL-DPV------------------------VVTLWYRA 179
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
           PE++    +   VD WS+G +  EM      F G+S  +   +I     DL+G P
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF----DLIGLP 230

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 15  FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS 74
           FS LR    +G G+ G V+  +DV +SE  A+K +            +   + +K++ I 
Sbjct: 56  FSDLR---EIGHGSFGAVYFARDVRNSEVVAIKKM----------SYSGKQSNEKWQDII 102
Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRF 132
            E R L+ + HP   + RG    +      ++YC G   DL  + K+  +++     I  
Sbjct: 103 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAA 158
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK-----TPQ-AS 186
                       H+  +++RD+K  NI++ E G + L DF  ++ ++P      TP   +
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMA 218
Query: 187 PKTVLAAN 194
           P+ +LA +
Sbjct: 219 PEVILAMD 226

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 15  FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS 74
           FS LR    +G G+ G V+  +DV +SE  A+K +            +   + +K++ I 
Sbjct: 17  FSDLR---EIGHGSFGAVYFARDVRNSEVVAIKKM----------SYSGKQSNEKWQDII 63
Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRF 132
            E R L+ + HP   + RG    +      ++YC G   DL  + K+  +++     I  
Sbjct: 64  KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAA 119
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK-----TPQ-AS 186
                       H+  +++RD+K  NI++ E G + L DF  ++ ++P      TP   +
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMA 179
Query: 187 PKTVLAAN 194
           P+ +LA +
Sbjct: 180 PEVILAMD 187

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 130/349 (37%), Gaps = 101/349 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  +G G  GVV+  ++    E+FALK I           L   D G     I  E  +L
Sbjct: 7   LEKIGEGTYGVVYKAQN-NYGETFALKKI----------RLEKEDEGIPSTTIR-EISIL 54
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + ++H  + +L  V+ T K +    ++   +DL  L     E      T +         
Sbjct: 55  KELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNG 112
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G + + DF L+                         
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA------------------------- 147
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       GI +    H                       V T  Y AP+++ G K
Sbjct: 148 --RAF-------GIPVRKYTHE----------------------VVTLWYRAPDVLMGSK 176
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRP-----PDL-------- 303
            +   +D WS+G +  EM+ G   F G S  +     +RIL  P     P++        
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 304 ---VGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              V EP P             +L+ ++L+ DP +RI  ++   H +FK
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/331 (19%), Positives = 129/331 (38%), Gaps = 79/331 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE-KKSKELTNNDNGDKYRRISFEQR 78
           +   +G+G   VV    + E+ + FA+K++  D+ +   S  L+  D       +  E  
Sbjct: 30  LCEVIGKGPFSVVRRCINRETGQQFAVKIV--DVAKFTSSPGLSTED-------LKREAS 80
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXX 136
           +   ++HP +  L    S+D  +    ++  G DL    +++  +  ++S+         
Sbjct: 81  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                   H+  I++RD+KP  +++   + +  + L  F ++ +L         ++ L A
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--------ESGLVA 192
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
             R G                                                T  ++AP
Sbjct: 193 GGRVG------------------------------------------------TPHFMAP 204
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK------ETFYRILCRPPDLVGEP 307
           E+++ + +   VD W  GV+L  +L G  PF G+  +      +  Y++  R    + E 
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISES 264
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              ++L+RR+L  DP +RI V E   H + K
Sbjct: 265 A--KDLVRRMLMLDPAERITVYEALNHPWLK 293

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 130/349 (37%), Gaps = 101/349 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +  +G G  GVV+  ++    E+FALK I           L   D G     I  E  +L
Sbjct: 7   LEKIGEGTYGVVYKAQN-NYGETFALKKI----------RLEKEDEGIPSTTIR-EISIL 54
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + ++H  + +L  V+ T K +    ++   +DL  L     E      T +         
Sbjct: 55  KELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNG 112
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I   G + + DF L+                         
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA------------------------- 147
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
             R+F       GI +    H                       + T  Y AP+++ G K
Sbjct: 148 --RAF-------GIPVRKYTHE----------------------IVTLWYRAPDVLMGSK 176
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRP-----PDL-------- 303
            +   +D WS+G +  EM+ G   F G S  +     +RIL  P     P++        
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 304 ---VGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              V EP P             +L+ ++L+ DP +RI  ++   H +FK
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
           +GT  Y+APE++ G  +D   D WS GV+L+ +L G  PF G++  +   ++        
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
            P         ++LIR++L   P+ RI   +   HE+ +    E
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 291

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/331 (19%), Positives = 129/331 (38%), Gaps = 79/331 (23%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE-KKSKELTNNDNGDKYRRISFEQR 78
           +   +G+G   VV    + E+ + FA+K++  D+ +   S  L+  D       +  E  
Sbjct: 28  LCEVIGKGPFSVVRRCINRETGQQFAVKIV--DVAKFTSSPGLSTED-------LKREAS 78
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXX 136
           +   ++HP +  L    S+D  +    ++  G DL    +++  +  ++S+         
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                   H+  I++RD+KP  +++   + +  + L  F ++ +L         ++ L A
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--------ESGLVA 190
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
             R G                                                T  ++AP
Sbjct: 191 GGRVG------------------------------------------------TPHFMAP 202
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK------ETFYRILCRPPDLVGEP 307
           E+++ + +   VD W  GV+L  +L G  PF G+  +      +  Y++  R    + E 
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISES 262
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              ++L+RR+L  DP +RI V E   H + K
Sbjct: 263 A--KDLVRRMLMLDPAERITVYEALNHPWLK 291

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 81/365 (22%), Positives = 124/365 (33%), Gaps = 107/365 (29%)
Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
           S  ++ S LG GA GVV       + E  A+K I     E   K L          R   
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-----EPFDKPLFA-------LRTLR 58
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           E ++L++ +H  +  +  +   D F      Y I      DLH   +  S QM SDD I+
Sbjct: 59  EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQ 115
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           +            H   +++RDLKP N++I  N  + + DF L+  +       S  T  
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT-- 173
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
               +SG+ +                                          FV T  Y 
Sbjct: 174 --GQQSGMVE------------------------------------------FVATRWYR 189
Query: 252 APEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP--- 307
           APE+ +    +  A+D WS G +L E+      F G   +     I      ++G P   
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF----GIIGTPHSD 245
Query: 308 -----------------------TPLR-----------NLIRRLLEKDPTKRIGVEEIKG 333
                                   PL            +L++R+L  DP KRI  +E   
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 334 HEFFK 338
           H + +
Sbjct: 306 HPYLQ 310

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPP 301
           T  Y APE++   G+D + D WSLGV+L+ ML G  PF+   R  T    +      +  
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 302 DLVGEPTPLRN-------LIRRLLEKDPTKRIGVEEIKGHEFFK 338
           D   E    +N       LI+ LL  DP KR+ +  ++ +E+ +
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
           +GT  Y+APE++ G  +D   D WS GV+L+ +L G  PF G++  +   ++        
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            P         ++LIR++L   P+ RI   +   HE+ +
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 78/294 (26%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V+ +G GA G VF  +D+++   F         +  K   +   + G     I  E  VL
Sbjct: 16  VAEIGEGAYGKVFKARDLKNGGRF---------VALKRVRVQTGEEGMPLSTIR-EVAVL 65
Query: 81  RNVE---HPLLPRLRGVLS---TDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFX 133
           R++E   HP + RL  V +   TD+     + +    +DL +   +  E     +TI+  
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +V+RDLKP+NI++  +G I L DF                     
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF--------------------- 164
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
               G+ +  SF     S  ++L                                 Y AP
Sbjct: 165 ----GLARIYSFQMALTSVVVTL--------------------------------WYRAP 188
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
           E++    +   VD WS+G +  EM      FRGSS  +   +IL    D++G P
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLP 238

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
           +GT  Y+APE++ G  +D   D WS GV+L+ +L G  PF G++  +   ++        
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            P         ++LIR++L   P+ RI   +   HE+ +
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
             GT  Y++PEI     H    D WSLG + + +L G  PF   + K T  +++    ++
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM 231
Query: 304 VGEPTPL----RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
              P+ L    ++LI +LL ++P  R+ +  +  H F 
Sbjct: 232 ---PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
           FVGT  ++APE+I+   +DF  D WSLG+   E+  G  P          + I    PP 
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPT 235
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
           L G+ + P +  +   L KDP  R   +E+  H+F
Sbjct: 236 LEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           GT E++APE++      F  D WS+GV+ + +L G +PF G +  ET   IL    DL  
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           E         +  I +LL K+ + RI   E   H + 
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKPEN++I                                NT   IK
Sbjct: 117 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 144
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 145 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 78/294 (26%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V+ +G GA G VF  +D+++   F         +  K   +   + G     I  E  VL
Sbjct: 16  VAEIGEGAYGKVFKARDLKNGGRF---------VALKRVRVQTGEEGMPLSTIR-EVAVL 65
Query: 81  RNVE---HPLLPRLRGVLS---TDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFX 133
           R++E   HP + RL  V +   TD+     + +    +DL +   +  E     +TI+  
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +V+RDLKP+NI++  +G I L DF                     
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF--------------------- 164
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
               G+ +  SF     S  ++L                                 Y AP
Sbjct: 165 ----GLARIYSFQMALTSVVVTLW--------------------------------YRAP 188
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
           E++    +   VD WS+G +  EM      FRGSS  +   +IL    D++G P
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLP 238

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 10  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 59  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKPEN++I                                NT   IK
Sbjct: 118 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 145
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 146 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 181
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 78/294 (26%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V+ +G GA G VF  +D+++   F         +  K   +   + G     I  E  VL
Sbjct: 16  VAEIGEGAYGKVFKARDLKNGGRF---------VALKRVRVQTGEEGMPLSTIR-EVAVL 65
Query: 81  RNVE---HPLLPRLRGVLS---TDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFX 133
           R++E   HP + RL  V +   TD+     + +    +DL +   +  E     +TI+  
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
                      H+  +V+RDLKP+NI++  +G I L DF                     
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF--------------------- 164
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
               G+ +  SF     S  ++L                                 Y AP
Sbjct: 165 ----GLARIYSFQMALTSVVVTL--------------------------------WYRAP 188
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
           E++    +   VD WS+G +  EM      FRGSS  +   +IL    D++G P
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLP 238

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/330 (20%), Positives = 116/330 (35%), Gaps = 85/330 (25%)
Query: 10  IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           +  +D+  + +   +GRGA GVV              K  WR     K   +   ++  +
Sbjct: 2   LHMIDYKEIEVEEVVGRGAFGVV-------------CKAKWR----AKDVAIKQIESESE 44
Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDD 128
            +    E R L  V HP + +L G       V   ++Y  G  L++ L   +    ++  
Sbjct: 45  RKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAA 102
Query: 129 TIRFXXXXXXXXXXXXHNM---GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
                           H+M    +++RDLKP N+++   G ++                 
Sbjct: 103 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL----------------- 145
Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFV 245
                                 K C  G + +   H                        
Sbjct: 146 ----------------------KICDFGTACDIQTHMTNNK------------------- 164
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSSRKETFYRIL--CRPP 301
           G+  ++APE+ EG  +    D +S G++L E++    PF   G       + +    RPP
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
            +   P P+ +L+ R   KDP++R  +EEI
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEI 254

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKPEN++I                                NT   IK
Sbjct: 116 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
           FVGT  ++APE+I+   +D   D WSLG+   E+  G  P          + I    PP 
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPT 239
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
           LVG+ T   +  I   L KDP+ R   +E+  H+F
Sbjct: 240 LVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++    DL       +        I+         
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKPEN++I                                NT   IK
Sbjct: 119 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++    DL       +        I+         
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKPEN++I                                NT   IK
Sbjct: 117 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 144
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 145 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/330 (20%), Positives = 116/330 (35%), Gaps = 85/330 (25%)
Query: 10  IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           +  +D+  + +   +GRGA GVV              K  WR     K   +   ++  +
Sbjct: 3   LHMIDYKEIEVEEVVGRGAFGVV-------------CKAKWR----AKDVAIKQIESESE 45
Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDD 128
            +    E R L  V HP + +L G       V   ++Y  G  L++ L   +    ++  
Sbjct: 46  RKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAA 103
Query: 129 TIRFXXXXXXXXXXXXHNM---GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
                           H+M    +++RDLKP N+++   G ++                 
Sbjct: 104 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL----------------- 146
Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFV 245
                                 K C  G + +   H                        
Sbjct: 147 ----------------------KICDFGTACDIQTHMTNNK------------------- 165
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSSRKETFYRIL--CRPP 301
           G+  ++APE+ EG  +    D +S G++L E++    PF   G       + +    RPP
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
            +   P P+ +L+ R   KDP++R  +EEI
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQRPSMEEI 255

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 124/365 (33%), Gaps = 107/365 (29%)
Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
           S  ++ S LG GA GVV       + E  A+K I     E   K L          R   
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-----EPFDKPLFA-------LRTLR 58
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           E ++L++ +H  +  +  +   D F      Y I      DLH   +  S QM SDD I+
Sbjct: 59  EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQ 115
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           +            H   +++RDLKP N++I  N  + + DF L+  +       S  T  
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT-- 173
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
               +SG+ +                                          +V T  Y 
Sbjct: 174 --GQQSGMTE------------------------------------------YVATRWYR 189
Query: 252 APEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP--- 307
           APE+ +    +  A+D WS G +L E+      F G   +     I      ++G P   
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF----GIIGTPHSD 245
Query: 308 -----------------------TPLR-----------NLIRRLLEKDPTKRIGVEEIKG 333
                                   PL            +L++R+L  DP KRI  +E   
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 334 HEFFK 338
           H + +
Sbjct: 306 HPYLQ 310

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 104/279 (37%), Gaps = 72/279 (25%)
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
           +LR  +HP +  L+ V    K+V    +   G +L  L K   ++ FS+           
Sbjct: 69  LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGEL--LDKILRQKFFSEREASAVLFTIT 126
Query: 139 XXXXXXHNMGIVYRDLKPENIM-IQENGH---IMLVDFDLSTKLSPKTPQASPKTVLAAN 194
                 H  G+V+RDLKP NI+ + E+G+   I + DF  + +L                
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL---------------- 170
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
                +     L   C +                               FV  E      
Sbjct: 171 -----RAENGLLXTPCYTA-----------------------------NFVAPE------ 190
Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCRPPDLVGE----- 306
           ++E +G+D A D WSLGV+L+  L G TPF      + +E   RI      L G      
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELL 345
               ++L+ + L  DP +R+    +  H +   V+W+ L
Sbjct: 251 SDTAKDLVSKXLHVDPHQRLTAALVLRHPWI--VHWDQL 287

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 124/352 (35%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL +     +        I+         
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/359 (20%), Positives = 127/359 (35%), Gaps = 110/359 (30%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G  GVV+  KD +             ++  K   L   D G     I  E  +L+ +
Sbjct: 29  VGEGTYGVVYKAKDSQGR-----------IVALKRIRLDAEDEGIPSTAIR-EISLLKEL 76
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            HP +  L  V+ +++ +    ++   +DL  +  +    +  D  I+            
Sbjct: 77  HHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGL-QDSQIKIYLYQLLRGVAH 134
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H   I++RDLKP+N++I  +G + L DF L+                           R
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA---------------------------R 167
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHD 262
           +F       GI +    H                       V T  Y AP+++ G K + 
Sbjct: 168 AF-------GIPVRSYTHE----------------------VVTLWYRAPDVLMGSKKYS 198
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR----------- 311
            +VD WS+G +  EM+ G   F G +  +   +I      ++G P P             
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF----SILGTPNPREWPQVQELPLWK 254
Query: 312 ------------------------NLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLL 346
                                   +L+  +L  DP KRI   +   H +FK ++ ++++
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQIMI 313

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
           +GT  Y+APE++ G  +D   D WS GV+L+ +L G  PF G++  +   ++        
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            P         ++LIR++L   P+ RI   +   HE+ +
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 116/324 (35%), Gaps = 80/324 (24%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 14  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 61
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 62  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++                                N+R 
Sbjct: 122 YLREKHK----IMHRDVKPSNILV--------------------------------NSRG 145
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
            IK     L  F  SG  +++                         FVGT  Y++PE ++
Sbjct: 146 EIK-----LCDFGVSGQLIDE---------------------MANEFVGTRSYMSPERLQ 179
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT---PLRNLI 314
           G  +    D WS+G+ L EM  G  P    +  E    I+  PP  +         ++ +
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFV 239
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFK 338
            + L K+P +R  ++++  H F K
Sbjct: 240 NKCLIKNPAERADLKQLMVHAFIK 263

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 141/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 11  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 61
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 62  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 108
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 109 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 165
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL +P +                 
Sbjct: 166 -----------------------------KETTSHNSLTEPCY----------------- 179
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 180 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 283
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 284 KVPQTPLHTSRVLKEDKERWEDVKEEM 310

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
           +GT  Y+APE++ G  +D   D WS GV+L+ +L G  PF G++  +   ++        
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
            P         ++LIR+ L   P+ RI   +   HE+ +    E
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKE 291

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 56  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 142
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 143 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 144
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 145 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---GSSRKETFYRILCRPPDL 303
           T  +VAPE+++ +G+D   D WSLG++L+ ML G TPF      + +E   RI      L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 304 VGE-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
            G          ++L+ ++L  DP +R+  +++  H +
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 56  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 142
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 143 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 12  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 60
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 61  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 147
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 148 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 183
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 10  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 59  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 145
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 146 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 181
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 144
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 145 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 10  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 59  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 145
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 146 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 181
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 10  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++    DL       +        I+         
Sbjct: 59  KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 145
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 146 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 181
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 245 VGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC 298
            GT  Y+APEIIE        G+   VD WS GV+++ +L G+ PF    ++    R++ 
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-WHRKQMLMLRMIM 229
Query: 299 RPPDLVGEPT------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                 G P        +++L+ R L   P KR   EE   H FF+
Sbjct: 230 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 245 VGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC 298
            GT  Y+APEIIE        G+   VD WS GV+++ +L G+ PF    ++    R++ 
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-WHRKQMLMLRMIM 242
Query: 299 RPPDLVGEPT------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                 G P        +++L+ R L   P KR   EE   H FF+
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++    DL       +        I+         
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---GSSRKETFYRILCRPPDL 303
           T  +VAPE+++ +G+D   D WSLG++L+ ML G TPF      + +E   RI      L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 304 VGE-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
            G          ++L+ ++L  DP +R+  +++  H +
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/354 (20%), Positives = 123/354 (34%), Gaps = 110/354 (31%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G  GVV+  KD +             ++  K   L   D G     I  E  +L+ +
Sbjct: 29  VGEGTYGVVYKAKDSQGR-----------IVALKRIRLDAEDEGIPSTAIR-EISLLKEL 76
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
            HP +  L  V+ +++ +    ++   +DL  +  +    +  D  I+            
Sbjct: 77  HHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGL-QDSQIKIYLYQLLRGVAH 134
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H   I++RDLKP+N++I  +G + L DF L+                           R
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA---------------------------R 167
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHD 262
           +F       GI +    H                       V T  Y AP+++ G K + 
Sbjct: 168 AF-------GIPVRSYTHE----------------------VVTLWYRAPDVLMGSKKYS 198
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR----------- 311
            +VD WS+G +  EM+ G   F G +  +   +I      ++G P P             
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF----SILGTPNPREWPQVQELPLWK 254
Query: 312 ------------------------NLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                                   +L+  +L  DP KRI   +   H +FK ++
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 245 VGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC 298
            GT  Y+APEIIE        G+   VD WS GV+++ +L G+ PF    ++    R++ 
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-WHRKQMLMLRMIM 242
Query: 299 RPPDLVGEPT------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                 G P        +++L+ R L   P KR   EE   H FF+
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
           +GT  Y+APE++  K +D   D WS+GV+L  +L G  PF G + +E   ++        
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            P+        ++LI+++L+ D  +RI  ++   H + K
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                          PL    R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 27  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 77
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 78  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 124
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 125 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 181
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 182 -----------------------------KETTSHNSLTTPCY----------------- 195
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 196 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 247
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 248 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 299
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 300 KVPQTPLHTSRVLKEDKERWEDVKEEM 326

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 17  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 67
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 68  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 114
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 115 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 171
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 172 -----------------------------KETTSHNSLTTPCY----------------- 185
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 186 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 237
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 238 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 289
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 290 KVPQTPLHTSRVLKEDKERWEDVKEEM 316

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 19  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 69
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 70  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 116
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 117 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 173
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 174 -----------------------------KETTSHNSLTTPCY----------------- 187
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 188 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 239
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 240 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 291
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 292 KVPQTPLHTSRVLKEDKERWEDVKEEM 318

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 12  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 62
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 63  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 109
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 110 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 166
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 167 -----------------------------KETTSHNSLTTPCY----------------- 180
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 181 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 232
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 233 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 284
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 285 KVPQTPLHTSRVLKEDKERWEDVKEEM 311

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 60/318 (18%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS-FEQR 78
           ++  +G G  G V L + +++ + +A+KV+                N  KY R +  E  
Sbjct: 39  VIRKMGDGTFGRVLLCQHIDNKKYYAVKVV---------------RNIKKYTRSAKIEAD 83
Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGY---AIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXX 134
           +L+ +++  +     V    KF+ Y    + + P G  L+ +  + +   F  + I+   
Sbjct: 84  ILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYC 143
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
                       M + + DLKPENI++ +                   P      +    
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDD-------------------PYFEKSLITVRR 184
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
              G KK + + +K  S+GI L D                          + T +Y APE
Sbjct: 185 VTDG-KKIQIYRTK--STGIKLID------------FGCATFKSDYHGSIINTRQYRAPE 229
Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLI 314
           +I   G D + D WS G VL E+  G+  FR     E    +     + + +P P +N++
Sbjct: 230 VILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM-----ESIIQPIP-KNML 283
Query: 315 RRLLEKDPTKRIGVEEIK 332
               + + +K +  +E+K
Sbjct: 284 YEATKTNGSKYVNKDELK 301

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 244 FVGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
             GT  Y+APEI++        G+   VD W+ GV+L  +L G+ PF    R+    R++
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF-WHRRQILMLRMI 317
Query: 298 CR------PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                    P+     + +++LI RLL+ DP  R+  E+   H FF+
Sbjct: 318 MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 11  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 61
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 62  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 108
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 109 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 165
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 166 -----------------------------KETTSHNSLTTPCY----------------- 179
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 180 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 283
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 284 KVPQTPLHTSRVLKEDKERWEDVKEEM 310

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 13  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 63
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 64  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 110
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 167
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 168 -----------------------------KETTSHNSLTTPCY----------------- 181
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 182 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 285
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 286 KVPQTPLHTSRVLKEDKERWEDVKEEM 312

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 18  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 68
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 69  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 115
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 116 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 172
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 173 -----------------------------KETTSHNSLTTPCY----------------- 186
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 187 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 238
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 239 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 290
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 291 KVPQTPLHTSRVLKEDKERWEDVKEEM 317

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 57  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 107
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 108 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 154
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 155 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 211
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 212 -----------------------------KETTSHNSLTTPCY----------------- 225
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 226 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 329
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 330 KVPQTPLHTSRVLKEDKERWEDVKEEM 356

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 123/365 (33%), Gaps = 107/365 (29%)
Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
           S  ++ S LG GA GVV       + E  A+K I     E   K L          R   
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-----EPFDKPLFA-------LRTLR 58
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           E ++L++ +H  +  +  +   D F      Y I      DLH   +  S QM SDD I+
Sbjct: 59  EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQ 115
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           +            H   +++RDLKP N++I  N  + + DF L+  +       S  T  
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT-- 173
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
               +SG+ +                                           V T  Y 
Sbjct: 174 --GQQSGMTEX------------------------------------------VATRWYR 189
Query: 252 APEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP--- 307
           APE+ +    +  A+D WS G +L E+      F G   +     I      ++G P   
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF----GIIGTPHSD 245
Query: 308 -----------------------TPLR-----------NLIRRLLEKDPTKRIGVEEIKG 333
                                   PL            +L++R+L  DP KRI  +E   
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 334 HEFFK 338
           H + +
Sbjct: 306 HPYLQ 310

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 13  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 63
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 64  --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 110
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 167
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 168 -----------------------------KETTSHNSLTTPCY----------------- 181
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 182 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 285
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 286 KVPQTPLHTSRVLKEDKERWEDVKEEM 312

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 83/226 (36%)
Query: 145 HNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKL---SPKTPQASPKTVLAANTRSG 198
           H  GI +RDLKPENI+ +   +   + + DFDL + +   +  TP  +P+          
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE---------- 177
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE- 257
                  L+  C                                   G+ EY+APE++E 
Sbjct: 178 -------LTTPC-----------------------------------GSAEYMAPEVVEV 195
Query: 258 ----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR--ILCR------------ 299
                  +D   D WSLGVVL+ ML G  PF G    +  +    +CR            
Sbjct: 196 FTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 255
Query: 300 ------PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
                   D     +  ++LI +LL +D  +R+   ++  H + +G
Sbjct: 256 GKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 83/223 (37%), Gaps = 75/223 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
           HN GI +RDLKPENI+ +                     Q SP  +   +  SGIK    
Sbjct: 128 HNKGIAHRDLKPENILCEHPN------------------QVSPVKICDFDLGSGIK---- 165
Query: 205 FLSKFCS--SGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            L+  CS  S   L  P                          G+ EY+APE++E    +
Sbjct: 166 -LNGDCSPISTPELLTPC-------------------------GSAEYMAPEVVEAFSEE 199
Query: 263 FAV-----DWWSLGVVLHEMLYGATPFRGSSRKETFY-RILCRPP--------------- 301
            ++     D WSLGV+L+ +L G  PF G    +  + R    P                
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE 259
Query: 302 ----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
               D        ++LI +LL +D  +R+   ++  H + +G 
Sbjct: 260 FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 127/357 (35%), Gaps = 120/357 (33%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVVF  K VES E  A+K + +D      K   N            E +++R 
Sbjct: 47  VIGNGSFGVVFQAKLVESDE-VAIKKVLQD------KRFKNR-----------ELQIMRI 88
Query: 83  VEHPLLPRLRGVLSTDK------FVGYAIDYCPGR----DLHSLRKQQSEQMFSDDTIRF 132
           V+HP +  L+    ++       F+   ++Y P        H  + +Q+  M     I+ 
Sbjct: 89  VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML---LIKL 145
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQ-ENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
                       H++GI +RD+KP+N+++   +G + L+DF             S K ++
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF------------GSAKILI 193
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
           A             +S  CS                                      Y 
Sbjct: 194 AGEPN---------VSXICS------------------------------------RYYR 208
Query: 252 APEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSS---------------------- 288
           APE+I G   +   +D WS G V+ E++ G   F G S                      
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268
Query: 289 -----RKETFYRILCRPPDLVGEP-TP--LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
                 +  F +I   P   V  P TP    +LI RLLE  P+ R+   E   H FF
Sbjct: 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK++      ++  EL
Sbjct: 63  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 113
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +   ++   G +L S  + + 
Sbjct: 114 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 160
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 161 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 217
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 218 -----------------------------KETTSHNSLTTPCY----------------- 231
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G   
Sbjct: 232 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 283
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
           +    +     P+       ++ LIR LL+ +PT+R+ + E   H +        +++ +
Sbjct: 284 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 335
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
           + P  P        E   R  D  +E+
Sbjct: 336 KVPQTPLHTSRVLKEDKERWEDVKEEM 362

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
           FVGT  ++APE+I+   +D   D WSLG+   E+  G  P       +  + I    PP 
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT 238
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           L G  + PL+  +   L K+P+ R   +E+  H+F 
Sbjct: 239 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 107/311 (34%), Gaps = 74/311 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G    V L +D+      A+KV+  DL    S  L       ++RR   E +    +
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL-------RFRR---EAQNAAAL 69
Query: 84  EHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            HP +  +      +   G      ++Y  G  L  +   +   M     I         
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H  GI++RD+KP NIMI     + ++DF                         GI
Sbjct: 129 LNFS-HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GI 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
            +          SG S+                            +GT +Y++PE   G 
Sbjct: 163 AR------AIADSGNSV----------------------TQTAAVIGTAQYLSPEQARGD 194
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL--VGEPTPLRNLI 314
             D   D +SLG VL+E+L G  PF G S     Y+ +     PP     G    L  ++
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVV 254
Query: 315 RRLLEKDPTKR 325
            + L K+P  R
Sbjct: 255 LKALAKNPENR 265

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
            VGT  Y++PE I   G++F  D WSLG +L+EM    +PF G   K   Y +  +    
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD--KMNLYSLCKKIEQC 253
Query: 304 VGEPTP-------LRNLIRRLLEKDPTKRIGVEEI 331
              P P       LR L+   +  DP KR  V  +
Sbjct: 254 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 122/349 (34%), Gaps = 99/349 (28%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           V  +G G  GVV+  ++  + E  ALK I  D         T        R IS    +L
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+         
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
               H+  +++RDLKP+N++I                                NT   IK
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
                L++  + G+ +    H                       V T  Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
            +  AVD WSLG +  EM+     F G S  +  +RI      PD V  P          
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                          PL    R+L+ ++L  DP KRI  +    H FF+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
           FVGT  ++APE+I+   +D   D WSLG+   E+  G  P       +  + I    PP 
Sbjct: 184 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT 243
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           L G  + PL+  +   L K+P+ R   +E+  H+F 
Sbjct: 244 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
            +GT EY+APEI+       A D W++G++ + +L   +PF G   +ET+  I     D 
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 304 VGEPTP-----LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLL 346
             E          + I+ LL K+P KR   E    H + +  ++E L 
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLF 300

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
           FVGT  ++APE+I+   +D   D WSLG+   E+  G  P       +  + I    PP 
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT 223
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           L G  + PL+  +   L K+P+ R   +E+  H+F 
Sbjct: 224 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
           FVGT  ++APE+I+   +D   D WSLG+   E+  G  P       +  + I    PP 
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT 223
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           L G  + PL+  +   L K+P+ R   +E+  H+F 
Sbjct: 224 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 82/223 (36%), Gaps = 75/223 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
           HN GI +RDLKPENI+ +                     Q SP  +      SGIK    
Sbjct: 128 HNKGIAHRDLKPENILCEHPN------------------QVSPVKICDFGLGSGIK---- 165
Query: 205 FLSKFCS--SGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
            L+  CS  S   L  P                          G+ EY+APE++E    +
Sbjct: 166 -LNGDCSPISTPELLTPC-------------------------GSAEYMAPEVVEAFSEE 199
Query: 263 FAV-----DWWSLGVVLHEMLYGATPFRGSSRKETFY-RILCRPP--------------- 301
            ++     D WSLGV+L+ +L G  PF G    +  + R    P                
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE 259
Query: 302 ----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
               D        ++LI +LL +D  +R+   ++  H + +G 
Sbjct: 260 FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRV 79
           +  +G G+ GVVF  ++ ++ +  A+K            +   +++    ++I+  E R+
Sbjct: 8   IGKIGEGSYGVVFKCRNRDTGQIVAIK------------KFLESEDDPVIKKIALREIRM 55
Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
           L+ ++HP L  L  V    + +    +YC    LH L + Q  +   +  ++        
Sbjct: 56  LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQ 113
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
                H    ++RD+KPENI+I ++  I L DF  +  L+
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 94/276 (34%), Gaps = 69/276 (25%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G    V L +D+      A+KV+  DL    S  L       ++RR   E +    +
Sbjct: 20  LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL-------RFRR---EAQNAAAL 69
Query: 84  EHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            HP +  +      +   G      ++Y  G  L  +   +   M     I         
Sbjct: 70  NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H  GI++RD+KP NIMI     + ++DF                         GI
Sbjct: 129 LNFS-HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GI 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
            +          SG S+                            +GT +Y++PE   G 
Sbjct: 163 AR------AIADSGNSV----------------------TQTAAVIGTAQYLSPEQARGD 194
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
             D   D +SLG VL+E+L G  PF G S     Y+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 107/311 (34%), Gaps = 74/311 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G    V L +D+      A+KV+  DL    S  L       ++RR   E +    +
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL-------RFRR---EAQNAAAL 69
Query: 84  EHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            HP +  +      +   G      ++Y  G  L  +   +   M     I         
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H  GI++RD+KP NIMI     + ++DF                         GI
Sbjct: 129 LNFS-HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GI 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
            +          SG S+                            +GT +Y++PE   G 
Sbjct: 163 AR------AIADSGNSV----------------------TQTAAVIGTAQYLSPEQARGD 194
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL--VGEPTPLRNLI 314
             D   D +SLG VL+E+L G  PF G S     Y+ +     PP     G    L  ++
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVV 254
Query: 315 RRLLEKDPTKR 325
            + L K+P  R
Sbjct: 255 LKALAKNPENR 265

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 94/276 (34%), Gaps = 69/276 (25%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G    V L +D+      A+KV+  DL    S  L       ++RR   E +    +
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL-------RFRR---EAQNAAAL 69
Query: 84  EHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
            HP +  +      +   G      ++Y  G  L  +   +   M     I         
Sbjct: 70  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                H  GI++RD+KP NI+I     + +VDF                         GI
Sbjct: 129 LNFS-HQNGIIHRDVKPANILISATNAVKVVDF-------------------------GI 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
            +          SG S+                            +GT +Y++PE   G 
Sbjct: 163 AR------AIADSGNSVXQ----------------------TAAVIGTAQYLSPEQARGD 194
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
             D   D +SLG VL+E+L G  PF G S     Y+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 53/151 (35%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
           H  GI++RD+KP NIMI     + ++DF                         GI +   
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GIAR--- 164
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFA 264
                  SG S+                            +GT +Y++PE   G   D  
Sbjct: 165 ---AIADSGNSV----------------------TQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 265 VDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
            D +SLG VL+E+L G  PF G S     Y+
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G  G VF  K+ E+ E  ALK +           L ++D G     +  E  +L+ +
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALR-EICLLKEL 58
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  + RL  VL +DK +    ++C  +DL       +  +   + ++            
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGF 116
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            H+  +++RDLKP+N++I  NG + L DF L+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLA 148

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 246 GTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           G+  +  PEI  G      F VD WS GV L+ +  G  PF G +  + F  I      +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 304 VGEP-TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            G+   PL +L++ +LE +P KR  + +I+ H +F+
Sbjct: 233 PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 245 VGTEEYVAPEIIEGKGHDF---AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--- 298
           VGT  ++APE +      F   A+D W++GV L+  ++G  PF          RI+C   
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-------RIMCLHS 250
Query: 299 -------RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
                    PD       L++LI R+L+K+P  RI V EIK H
Sbjct: 251 KIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 68/186 (36%), Gaps = 58/186 (31%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
           H  GI++RD+KP NIMI     + ++DF                         GI +   
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GIAR--- 181
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFA 264
                  SG S+                            +GT +Y++PE   G   D  
Sbjct: 182 ---AIADSGNSVTQ----------------------TAAVIGTAQYLSPEQARGDSVDAR 216
Query: 265 VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL--VGEPTPLRNLIRRLLE 319
            D +SLG VL+E+L G  PF G S     Y+ +     PP     G    L  ++ + L 
Sbjct: 217 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 276
Query: 320 KDPTKR 325
           K+P  R
Sbjct: 277 KNPENR 282

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/365 (20%), Positives = 123/365 (33%), Gaps = 125/365 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 48  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 89
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y + +  G DL+ L K Q     S+D I
Sbjct: 90  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHI 146
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++     + + DF L+    P          
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 197
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                         FL+++                                   V T  Y
Sbjct: 198 ---------HDHTGFLTEY-----------------------------------VATRWY 213
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
            APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+ 
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 269
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
                             P +N                 L+ ++L  +P KRI VE+   
Sbjct: 270 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 329
Query: 334 HEFFK 338
           H + +
Sbjct: 330 HPYLE 334

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
Query: 1   MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
           +N  V + P R      L+ +  +G GA G V    D    +  A+K + R       + 
Sbjct: 19  LNKTVWEVPQR------LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPF-----QS 67
Query: 61  LTNNDNGDKYRRISFEQRVLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHS 115
           L +       RR   E R+L++++H     LL       S + F   Y +    G DL++
Sbjct: 68  LIHA------RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           + K Q+    SD+ ++F            H+ GI++RDLKP N+ + E+  + ++DF L+
Sbjct: 122 IVKSQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V T  Y APEI+    H +  VD WS+G ++ E+L G   F GS   +   RI+    +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM----E 243
Query: 303 LVGEPTP 309
           +VG P+P
Sbjct: 244 VVGTPSP 250

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 125/329 (37%), Gaps = 74/329 (22%)
Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           LR+   L  G    V+  +DV S   +ALK           + L+N +  +K R I  E 
Sbjct: 30  LRVRRVLAEGGFAFVYEAQDVGSGREYALK-----------RLLSNEE--EKNRAIIQEV 76
Query: 78  RVLRNVE-HPLLPRLRGVLSTDKF---VGYA-----IDYCPGRDLHSLRKQQSEQMFSDD 128
             ++ +  HP + +     S  K     G A      + C G+ +  L+K +S    S D
Sbjct: 77  CFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCD 136
Query: 129 TIR--FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           T+   F                I++RDLK EN+++   G I L DF  +T +S       
Sbjct: 137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS-----HY 191
Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVG 246
           P    +A  R+ +++  +  +                                       
Sbjct: 192 PDYSWSAQRRALVEEEITRNT--------------------------------------- 212
Query: 247 TEEYVAPEIIEGKGHDFAV----DWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           T  Y  PEII+    +F +    D W+LG +L+ + +   PF   ++          PP 
Sbjct: 213 TPMYRTPEIIDLYS-NFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPH 271
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
              + T   +LIR +L+ +P +R+ + E+
Sbjct: 272 DT-QYTVFHSLIRAMLQVNPEERLSIAEV 299

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           + +S +G GA G V    DV+S    A+K        K S+   +  +  +  R   E R
Sbjct: 54  QTLSPVGSGAYGSVCSSYDVKSGLKIAVK--------KLSRPFQSIIHAKRTYR---ELR 102
Query: 79  VLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
           +L++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F 
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFL 159
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                      H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 160 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCR 299
           +V T  Y APEI+    H +  VD WS+G ++ E+L G T F G+   ++ +   R+   
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 300 PP----------------------------DLVGEPTPLR-NLIRRLLEKDPTKRIGVEE 330
           PP                            D+     PL  +L+ ++L  D  KRI   E
Sbjct: 271 PPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASE 330
Query: 331 IKGHEFF 337
              H +F
Sbjct: 331 ALAHPYF 337

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
           V+ +G GA G V+  +D  S    ALK          S  + N + G      R ++  +
Sbjct: 9   VAEIGVGAYGTVYKARDPHSGHFVALK----------SVRVPNGEEGLPISTVREVALLR 58
Query: 78  RVLRNVEHPLLPRLRGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           R L   EHP + RL  V +T +      V    ++   +DL +   +        +TI+ 
Sbjct: 59  R-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                       H   IV+RDLKPENI++   G + L DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
           V+ +G GA G V+  +D  S    ALK          S  + N + G      R ++  +
Sbjct: 9   VAEIGVGAYGTVYKARDPHSGHFVALK----------SVRVPNGEEGLPISTVREVALLR 58
Query: 78  RVLRNVEHPLLPRLRGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           R L   EHP + RL  V +T +      V    ++   +DL +   +        +TI+ 
Sbjct: 59  R-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                       H   IV+RDLKPENI++   G + L DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSRKETFYRIL 297
           T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G  R+    +  
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 251
Query: 298 CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
              P+        + LIR LL+ DPT+R+ + +   H + 
Sbjct: 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
           +GT  ++APE+I+  G++   D WSLG+   EM  G  P+         + I   PP   
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTF 245
Query: 305 GEPT----PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
            +P        + +++ L K P +R    ++  H F +  
Sbjct: 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSRKETFYRIL 297
           T  YVAPE++  + +D + D WSLGV+++ +L G  PF          G  R+    +  
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 232
Query: 298 CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
              P+        + LIR LL+ DPT+R+ + +   H + 
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +     S +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 205
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  +  +         +   +++  G  L  +    +    +++ I             
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 262
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H  G+++RD+K ++I++  +G + L DF                               
Sbjct: 263 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 292
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                FC+  +S E P                         VGT  ++APE+I    +  
Sbjct: 293 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 326
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +    I    PP L  + + +P L+  + RLL 
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 386
Query: 320 KDPTKRIGVEEIKGHEFF 337
           +DP +R    E+  H F 
Sbjct: 387 RDPAQRATAAELLKHPFL 404

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +     S +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 82  IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 128
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  +  +         +   +++  G  L  +    +    +++ I             
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 185
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H  G+++RD+K ++I++  +G + L DF                               
Sbjct: 186 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 215
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                FC+  +S E P                         VGT  ++APE+I    +  
Sbjct: 216 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 249
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +    I    PP L  + + +P L+  + RLL 
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 309
Query: 320 KDPTKRIGVEEIKGHEFF 337
           +DP +R    E+  H F 
Sbjct: 310 RDPAQRATAAELLKHPFL 327

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +     S +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 39  IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 85
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  +  +         +   +++  G  L  +    +    +++ I             
Sbjct: 86  QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 142
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H  G+++RD+K ++I++  +G + L DF                               
Sbjct: 143 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 172
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                FC+  +S E P                         VGT  ++APE+I    +  
Sbjct: 173 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 206
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +    I    PP L  + + +P L+  + RLL 
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 266
Query: 320 KDPTKRIGVEEIKGHEFF 337
           +DP +R    E+  H F 
Sbjct: 267 RDPAQRATAAELLKHPFL 284

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+GV++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P+P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +     S +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 28  IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 74
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  +  +         +   +++  G  L  +    +    +++ I             
Sbjct: 75  QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 131
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H  G+++RD+K ++I++  +G + L DF                               
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 161
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                FC+  +S E P                         VGT  ++APE+I    +  
Sbjct: 162 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 195
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +    I    PP L  + + +P L+  + RLL 
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 255
Query: 320 KDPTKRIGVEEIKGHEFF 337
           +DP +R    E+  H F 
Sbjct: 256 RDPAQRATAAELLKHPFL 273

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +     S +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 37  IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 83
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  +  +         +   +++  G  L  +    +    +++ I             
Sbjct: 84  QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 140
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H  G+++RD+K ++I++  +G + L DF                               
Sbjct: 141 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 170
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                FC+  +S E P                         VGT  ++APE+I    +  
Sbjct: 171 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 204
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +    I    PP L  + + +P L+  + RLL 
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 264
Query: 320 KDPTKRIGVEEIKGHEFF 337
           +DP +R    E+  H F 
Sbjct: 265 RDPAQRATAAELLKHPFL 282

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
Query: 1   MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
           +N  V + P R      L+ +  +G GA G V    D    +  A+K + R       + 
Sbjct: 19  LNKTVWEVPQR------LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPF-----QS 67
Query: 61  LTNNDNGDKYRRISFEQRVLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHS 115
           L +       RR   E R+L++++H     LL       S + F   Y +    G DL++
Sbjct: 68  LIHA------RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           + K Q+    SD+ ++F            H+ GI++RDLKP N+ + E+  + ++DF L+
Sbjct: 122 IVKCQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V T  Y APEI+    H +  VD WS+G ++ E+L G   F GS   +   RI+    +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM----E 243
Query: 303 LVGEPTP 309
           +VG P+P
Sbjct: 244 VVGTPSP 250

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+GV++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P+P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V +     S +  A+K +  DL +++ +EL  N           E  ++R+ 
Sbjct: 32  IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 78
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  +  +         +   +++  G  L  +    +    +++ I             
Sbjct: 79  QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 135
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H  G+++RD+K ++I++  +G + L DF                               
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 165
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                FC+  +S E P                         VGT  ++APE+I    +  
Sbjct: 166 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 199
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPPDL--VGEPTP-LRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+      +    I    PP L  + + +P L+  + RLL 
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 259
Query: 320 KDPTKRIGVEEIKGHEFF 337
           +DP +R    E+  H F 
Sbjct: 260 RDPAQRATAAELLKHPFL 277

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G  G VF  K+ E+ E  ALK +           L ++D G     +  E  +L+ +
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALR-EICLLKEL 58
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
           +H  + RL  VL +DK +    ++C  +DL       +  +   + ++            
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGF 116
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            H+  +++RDLKP+N++I  NG + L +F L+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 11/172 (6%)
Query: 9   PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
           P+ S+  S    V+ +G GA G V+  +D  S    ALK +           L  +    
Sbjct: 2   PLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIS---- 57
Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQ 123
             R ++  +R L   EHP + RL  V +T +      V    ++   +DL +   +    
Sbjct: 58  TVREVALLRR-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP 115
Query: 124 MFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
               +TI+             H   IV+RDLKPENI++   G + L DF L+
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           FV T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 242
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 243 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 288
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 289 NKLKASQARDLLSKMLVIDASKRISVDEALQ 319

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
Query: 1   MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
           +N  V + P R      L+ +  +G GA G V    D    +  A+K + R       + 
Sbjct: 11  LNKTVWEVPQR------LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPF-----QS 59
Query: 61  LTNNDNGDKYRRISFEQRVLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHS 115
           L +       RR   E R+L++++H     LL       S + F   Y +    G DL++
Sbjct: 60  LIHA------RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 113
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           + K Q+    SD+ ++F            H+ GI++RDLKP N+ + E+  + ++DF L+
Sbjct: 114 IVKCQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V T  Y APEI+    H +  VD WS+G ++ E+L G   F GS   +   RI+    +
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM----E 235
Query: 303 LVGEPTP 309
           +VG P+P
Sbjct: 236 VVGTPSP 242

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P+P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P+P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P+P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 202
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 203 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 235
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 287
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 288 LRPSDRPTFEEIQNHPWMQDV 308

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 188 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 220
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 272
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDV 293

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P+P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 174
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 175 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 207
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 259
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 260 LRPSDRPTFEEIQNHPWMQDV 280

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 175
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 176 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 208
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 260
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 261 LRPSDRPTFEEIQNHPWMQDV 281

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 202
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 203 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 235
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 287
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 288 LRPSDRPTFEEIQNHPWMQDV 308

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/315 (20%), Positives = 113/315 (35%), Gaps = 76/315 (24%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG+ G V  ++D ++    A+K +  ++   +++EL                     +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVF--RAEELM----------------ACAGL 142
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
             P +  L G +    +V   ++   G  L  L K+Q      +D   +           
Sbjct: 143 TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEY 200
Query: 144 XHNMGIVYRDLKPENIMIQENG-HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
            H+  I++ D+K +N+++  +G H  L DF  +  L    P    K++L  +        
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ---PDGLGKSLLTGD-------- 249
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
                                                      GTE ++APE++ G+  D
Sbjct: 250 ----------------------------------------YIPGTETHMAPEVVLGRSCD 269
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP---TPLR-NLIRRLL 318
             VD WS   ++  ML G  P+    R     +I   PP +   P    PL    I+  L
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGL 329
Query: 319 EKDPTKRIGVEEIKG 333
            K+P  R+   E+ G
Sbjct: 330 RKEPIHRVSAAELGG 344

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P+P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 241
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 242 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 287
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 288 NKLKASQARDLLSKMLVIDASKRISVDEALQ 318

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 160
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 161 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 193
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 245
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDV 266

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 160
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 161 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 193
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 245
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDV 266

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 159
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 160 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 192
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 244
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 245 LRPSDRPTFEEIQNHPWMQDV 265

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 159
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 160 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 192
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 244
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 245 LRPSDRPTFEEIQNHPWMQDV 265

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 194
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 195 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 227
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 228 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 279
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 280 LRPSDRPTFEEIQNHPWMQDV 300

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 160
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 161 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 193
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 245
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDV 266

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 245 VGTEEYVAPEIIEGKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETF 293
           VGT  Y+ PE I+                   D WSLG +L+ M YG TPF+    + + 
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 294 YRILCRPPDLVGEP----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              +  P   +  P      L+++++  L++DP +RI + E+  H + +
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K SK   +  +  +  R   E R+L
Sbjct: 39  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSKPFQSIIHAKRTYR---ELRLL 87
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 88  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
           FVGT +Y+APE++E K +   VD+WS G +  E + G  PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
           FVGT +Y+APE++E K +   VD+WS G +  E + G  PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 47  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 95
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 96  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 124/348 (35%), Gaps = 91/348 (26%)
Query: 2   NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
           N +++D  + S           LG G  G V  + +  + E FALK +      ++  EL
Sbjct: 57  NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVEL 107
Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                   + R S    ++R V+         + +  K +    +   G +L S  + + 
Sbjct: 108 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVXECLDGGELFSRIQDRG 154
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
           +Q F++                 H++ I +RD+KPEN++      N  + L DF  +   
Sbjct: 155 DQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 211
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
                                        K  +S  SL  P +                 
Sbjct: 212 -----------------------------KETTSHNSLTTPCY----------------- 225
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
                   T  YVAPE++  + +D + D WSLGV+ + +L G  PF          G   
Sbjct: 226 --------TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKT 277
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           +    +     P+       ++ LIR LL+ +PT+R  + E   H + 
Sbjct: 278 RIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 158
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 159 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 191
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 192 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 243
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 244 LRPSDRPTFEEIQNHPWMQDV 264

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 73  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 120
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++   G I L DF +S +L              AN+  
Sbjct: 181 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 226
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
           G    RS++S                                             PE ++
Sbjct: 227 GT---RSYMS---------------------------------------------PERLQ 238
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
           G  +    D WS+G+ L EM  G  P      KE                          
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 298
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
            + Y +  RPP         +V EP P           ++ + + L K+P +R  ++++ 
Sbjct: 299 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 358
Query: 333 GHEFFK 338
            H F K
Sbjct: 359 VHAFIK 364

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 67  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 125
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 179 RGG------------------KIPIR----------------------------WTSPEA 192
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 248
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQI 271

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 23  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 71
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 72  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 23  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 71
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 72  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 155
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 156 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R            +  ++LIR  L 
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 240
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDV 261

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 46  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 94
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 95  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 151
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 47  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 95
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 96  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 11  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++   G I L DF +S +L              AN+  
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 164
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
           G    RS++S                                             PE ++
Sbjct: 165 G---TRSYMS---------------------------------------------PERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
           G  +    D WS+G+ L EM  G  P      KE                          
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
            + Y +  RPP         +V EP P           ++ + + L K+P +R  ++++ 
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 333 GHEFFK 338
            H F K
Sbjct: 297 VHAFIK 302

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 33  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 81
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 82  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 27/169 (15%)
Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWR----DLIEKKSKELTNNDNGDKYR 71
           +  R +  +G GA G V    D  +    A+K ++R    +L  K++           YR
Sbjct: 25  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRA-----------YR 73
Query: 72  RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYC-----PGRDLHSLRKQQSEQMFS 126
               E R+L+++ H  +  L  V + D+ +    D+       G DL  L K +      
Sbjct: 74  ----ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK---LG 126
Query: 127 DDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +D I+F            H  GI++RDLKP N+ + E+  + ++DF L+
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 11  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++   G I L DF +S +L              AN+  
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 164
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
           G    RS++S                                             PE ++
Sbjct: 165 G---TRSYMS---------------------------------------------PERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
           G  +    D WS+G+ L EM  G  P      KE                          
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
            + Y +  RPP         +V EP P           ++ + + L K+P +R  ++++ 
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 333 GHEFFK 338
            H F K
Sbjct: 297 VHAFIK 302

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 84  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 142
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 195
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 196 RGG------------------KIPIR----------------------------WTSPEA 209
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 265
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 266 ALYQLMLDCWQKDRNNRPKFEQI 288

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
           GTE ++APE++ G+  D  VD WS   ++  ML G  P+    R     +I   PP +  
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 293
Query: 306 EP---TPLR-NLIRRLLEKDPTKRIGVEEIKG 333
            P    PL    I+  L K+P  R+   E+ G
Sbjct: 294 IPPSCAPLTAQAIQEGLRKEPIHRVSAAELGG 325

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 174
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 175 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 207
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R               ++LIR  L 
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 259
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 260 LRPSDRPTFEEIQNHPWMQDV 280

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
                    H+  I++RDLKP N+ + E+  + ++DF L
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 11  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++   G I L DF +S +L              AN+  
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 164
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
           G    RS++S                                             PE ++
Sbjct: 165 G---TRSYMS---------------------------------------------PERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
           G  +    D WS+G+ L EM  G  P      KE                          
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
            + Y +  RPP         +V EP P           ++ + + L K+P +R  ++++ 
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 333 GHEFFK 338
            H F K
Sbjct: 297 VHAFIK 302

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 11  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 59  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++   G I L DF +S +L              AN+  
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 164
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
           G    RS++S                                             PE ++
Sbjct: 165 G---TRSYMS---------------------------------------------PERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
           G  +    D WS+G+ L EM  G  P      KE                          
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
            + Y +  RPP         +V EP P           ++ + + L K+P +R  ++++ 
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 333 GHEFFK 338
            H F K
Sbjct: 297 VHAFIK 302

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 245 VGTEEYVAPEIIEGKGHDFA--VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI----LC 298
            GT  +VAPE++      +    D WS GV+LH +L GA PF G +  +T  ++    LC
Sbjct: 235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLC 294
Query: 299 RPPDLVGEPTPL-RNLIRRLLEKDPTKR 325
                    +PL R+L+  LL ++  +R
Sbjct: 295 FENPNYNVLSPLARDLLSNLLNRNVDER 322

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 175
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 176 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 208
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R               ++LIR  L 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 260
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 261 LRPSDRPTFEEIQNHPWMQDV 281

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 202
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 203 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 235
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R               ++LIR  L 
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 287
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 288 LRPSDRPTFEEIQNHPWMQDV 308

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 119/366 (32%), Gaps = 122/366 (33%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVVF V    S       V+ R LI  + K    N       +I  E +VL
Sbjct: 38  ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 85
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
                P +    G   +D  +   +++  G  L  + K+     EQ+    +I       
Sbjct: 86  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
                      I++RD+KP NI++   G I L DF +S +L              AN+  
Sbjct: 146 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 191
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
           G    RS++S                                             PE ++
Sbjct: 192 GT---RSYMS---------------------------------------------PERLQ 203
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC------------------- 298
           G  +    D WS+G+ L EM  G  P      KE      C                   
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263
Query: 299 --------RPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
                   RPP         +V EP P           ++ + + L K+P +R  ++++ 
Sbjct: 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 323
Query: 333 GHEFFK 338
            H F K
Sbjct: 324 VHAFIK 329

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 29  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 77
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 78  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 33  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 81
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 82  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 207
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 208 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 240
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R               ++LIR  L 
Sbjct: 241 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 292
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 293 LRPSDRPTFEEIQNHPWMQDV 313

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/364 (19%), Positives = 120/364 (32%), Gaps = 125/364 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 30  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 71
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 72  REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++     + + DF L+    P          
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD--------- 179
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                         FL+++                                   V T  Y
Sbjct: 180 ---------HDHTGFLTEY-----------------------------------VATRWY 195
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
            APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+ 
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 251
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
                             P +N                 L+ ++L  +P KRI VE+   
Sbjct: 252 EDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 334 HEFF 337
           H + 
Sbjct: 312 HPYL 315

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 94  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 152
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 205
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 206 RGG------------------KIPIR----------------------------WTSPEA 219
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 275
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 276 ALYQLMLDCWQKDRNNRPKFEQI 298

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 32  LSPIGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 80
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 81  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 50  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 98
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 99  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 155
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 44/181 (24%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
           H+ G+++RDLKP NI    +  + + DF L T +     + +  T + A  R   +    
Sbjct: 135 HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ---- 190
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFA 264
                                                   VGT+ Y++PE I G  +   
Sbjct: 191 ----------------------------------------VGTKLYMSPEQIHGNSYSHK 210
Query: 265 VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTK 324
           VD +SLG++L E+LY  +      R  T  R L  PP    +      +++ +L   P +
Sbjct: 211 VDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPME 270
Query: 325 R 325
           R
Sbjct: 271 R 271

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/370 (20%), Positives = 128/370 (34%), Gaps = 113/370 (30%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL-------------------TN 63
            LG G+ G+V  V D+ES + FALK + +D    K++EL                   T 
Sbjct: 14  TLGTGSFGIVCEVFDIESGKRFALKKVLQD-PRYKNRELDIMKVLDHVNIIKLVDYFYTT 72
Query: 64  NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL---STDKFVGYAIDYCPGRDLHSLRKQ- 119
            D   K  +   +   L    + +    + V+   S +K++   ++Y P   LH + K  
Sbjct: 73  GDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSF 131
Query: 120 -QSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTK 177
            +S +    + I              H++GI +RD+KP+N+++    + + L DF  + K
Sbjct: 132 IRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKK 191
Query: 178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXX 237
           L P  P  +                    S+F  +                         
Sbjct: 192 LIPSEPSVA-----------------XICSRFYRA------------------------- 209
Query: 238 XXXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
                  +G  EY             ++D WS+G V  E++ G   F G +  +   RI+
Sbjct: 210 ---PELMLGATEYTP-----------SIDLWSIGCVFGELILGKPLFSGETSIDQLVRII 255
Query: 298 --------------------CRPPDLV----------GEPTPLRNLIRRLLEKDPTKRIG 327
                                R P L           G P+   +L+ ++L  +P  RI 
Sbjct: 256 QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN 315
Query: 328 VEEIKGHEFF 337
             E   H FF
Sbjct: 316 PYEAMAHPFF 325

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           ++ +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 37  LAPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 85
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 86  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 142
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 182

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 38  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 86
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 87  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 143
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/364 (19%), Positives = 120/364 (32%), Gaps = 125/364 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 30  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 71
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 72  REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++     + + DF L+    P          
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--------- 179
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                         FL+++                                   V T  Y
Sbjct: 180 ---------HDHTGFLTEY-----------------------------------VATRWY 195
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
            APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+ 
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 251
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
                             P +N                 L+ ++L  +P KRI VE+   
Sbjct: 252 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 334 HEFF 337
           H + 
Sbjct: 312 HPYL 315

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 34  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 82
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 83  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 39  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 87
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 88  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 29  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 77
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 78  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 39  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 87
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 88  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 24  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 72
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 73  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 25  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 73
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 74  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 130
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 38  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 86
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 87  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 143
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 46  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 94
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 95  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 151
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 155
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 156 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R               ++LIR  L 
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 240
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDV 261

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V          +F  K   R  ++K S+   +  +  +  R   E R+L
Sbjct: 29  LSPVGSGAYGSV--------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLL 77
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 78  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 29  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 77
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 78  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 24  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 72
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 73  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V          +F  K   R  ++K S+   +  +  +  R   E R+L
Sbjct: 50  LSPVGSGAYGSV--------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLL 98
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 99  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 155
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V          +F  K   R  ++K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSV--------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 34  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 82
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 83  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 34  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 82
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 83  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 23  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 71
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 72  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 34  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 82
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 83  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 47  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 95
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 96  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 32  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 80
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 81  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 33  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 81
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 82  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 33  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 81
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 82  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 32  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 80
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 81  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 26  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 74
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 75  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 131
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 182
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 183 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 215
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R               ++LIR  L 
Sbjct: 216 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 267
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 268 LRPSDRPTFEEIQNHPWMQDV 288

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
           V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQL 241
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHEN 362
           G P P    +++L    PT R  VE       + G ++E L      P++  PA  EH N
Sbjct: 242 GTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH-N 287
Query: 363 NESDGRGR---------DGTKEIDVEKFVQ 383
                + R         D +K I V++ +Q
Sbjct: 288 ALKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 32  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 80
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 81  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 74/201 (36%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 175
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 176 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 208
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF       R + F+R               ++LIR  L 
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 260
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P  R   EEI+ H + + V
Sbjct: 261 LRPXDRPTFEEIQNHPWMQDV 281

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 90/232 (38%), Gaps = 72/232 (31%)
Query: 145 HNMGIVYRDLKPENIMIQ-ENGH----IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           H++ IV+RDLKP NI+I   N H     M+ DF L  KL              A  R   
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL--------------AVGRHSF 180
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
            +R         SG+                               GTE ++APE++   
Sbjct: 181 SRR---------SGVP------------------------------GTEGWIAPEMLSED 201
Query: 260 GHD---FAVDWWSLGVVLHEMLY-GATPFRGSSRKET-----FYRILCRPPDLVGEPTPL 310
             +   + VD +S G V + ++  G+ PF  S +++         + C  P+   E    
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE-KHEDVIA 260
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
           R LI +++  DP KR   + +  H FF    W L  ++    ++  R E E+
Sbjct: 261 RELIEKMIAMDPQKRPSAKHVLKHPFF----WSLEKQLQFFQDVSDRIEKES 308

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 32  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYXQRTL 73
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 74  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++     + + DF L+    P          
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 181
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                         FL+++                                   V T  Y
Sbjct: 182 ---------HDHTGFLTEY-----------------------------------VATRWY 197
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
            APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+ 
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 253
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
                             P +N                 L+ ++L  +P KRI VE+   
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 334 HEFFK 338
           H + +
Sbjct: 314 HPYLE 318

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF L+  L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 188
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 189 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 221
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF         + F+R            +  ++LIR  L 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 273
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDV 294

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 188
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 189 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 221
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF         + F+R            +  ++LIR  L 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 273
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDV 294

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 188 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 220
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF         + F+R            +  ++LIR  L 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 272
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDV 293

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/297 (20%), Positives = 114/297 (38%), Gaps = 77/297 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  +G GA GVV   +   + +  A+K I        + ++  N      +R   E ++
Sbjct: 58  IIETIGNGAYGVVSSARRRLTGQQVAIKKI------PNAFDVVTNA-----KRTLRELKI 106
Query: 80  LRNVEHPLLPRLRGVLSTDKFVG-----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
           L++ +H  +  ++ +L      G     Y +      DLH +    S Q  + + +R+  
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI--IHSSQPLTLEHVRYFL 164
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
                     H+  +++RDLKP N+++ EN  + + DF ++  L       SP       
Sbjct: 165 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC-----TSP------- 212
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
                 + + F+++                                   +V T  Y APE
Sbjct: 213 -----AEHQYFMTE-----------------------------------YVATRWYRAPE 232
Query: 255 IIEGKGHDF--AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP 309
           ++    H++  A+D WS+G +  EML     F G +       I+     ++G P+P
Sbjct: 233 LMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM----VLGTPSP 284

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 188 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 220
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF         + F+R            +  ++LIR  L 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 272
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDV 293

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/297 (20%), Positives = 114/297 (38%), Gaps = 77/297 (25%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           I+  +G GA GVV   +   + +  A+K I        + ++  N      +R   E ++
Sbjct: 59  IIETIGNGAYGVVSSARRRLTGQQVAIKKI------PNAFDVVTNA-----KRTLRELKI 107
Query: 80  LRNVEHPLLPRLRGVLSTDKFVG-----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
           L++ +H  +  ++ +L      G     Y +      DLH +    S Q  + + +R+  
Sbjct: 108 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI--IHSSQPLTLEHVRYFL 165
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
                     H+  +++RDLKP N+++ EN  + + DF ++  L       SP       
Sbjct: 166 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC-----TSP------- 213
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
                 + + F+++                                   +V T  Y APE
Sbjct: 214 -----AEHQYFMTE-----------------------------------YVATRWYRAPE 233
Query: 255 IIEGKGHDF--AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP 309
           ++    H++  A+D WS+G +  EML     F G +       I+     ++G P+P
Sbjct: 234 LMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM----VLGTPSP 285

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 28  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 70  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++     + + DF L+    P          
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 177
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                         FL+++                                   V T  Y
Sbjct: 178 ---------HDHTGFLTEY-----------------------------------VATRWY 193
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
            APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+ 
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 249
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
                             P +N                 L+ ++L  +P KRI VE+   
Sbjct: 250 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 334 HEFFK 338
           H + +
Sbjct: 310 HPYLE 314

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 46/176 (26%)
Query: 244 FVGTEEYVAPEII-EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V    Y APE++ + KG    VD WS G V+ EM      FRGS    TFY  L +  +
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TFYNQLNKIVE 248
Query: 303 LVGEP---------TP-----LRN-----------------------LIRRLLEKDPTKR 325
           +VG P         +P     LRN                       LI ++LE +P +R
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 326 IGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKF 381
           I  E+   H +F+     L   +     +  RF  + + +D          +VE+F
Sbjct: 309 ISTEQALRHPYFES----LFDPLDLTEGLSERFHFDESVTDVYDMHKIFTAEVERF 360

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 46/176 (26%)
Query: 244 FVGTEEYVAPEII-EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V    Y APE++ + KG    VD WS G V+ EM      FRGS    TFY  L +  +
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TFYNQLNKIVE 248
Query: 303 LVGEP---------TP-----LRN-----------------------LIRRLLEKDPTKR 325
           +VG P         +P     LRN                       LI ++LE +P +R
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 326 IGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKF 381
           I  E+   H +F+     L   +     +  RF  + + +D          +VE+F
Sbjct: 309 ISTEQALRHPYFES----LFDPLDLTEGLSERFHFDESVTDVYDMHKIFTAEVERF 360

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 28  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 70  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++     + + DF L+    P          
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 177
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                         FL+++                                   V T  Y
Sbjct: 178 ---------HDHTGFLTEY-----------------------------------VATRWY 193
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
            APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+ 
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 249
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
                             P +N                 L+ ++L  +P KRI VE+   
Sbjct: 250 EDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 334 HEFFK 338
           H + +
Sbjct: 310 HPYLE 314

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 32  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 73
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 74  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++     + + DF L+    P          
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 181
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                         FL+++                                   V T  Y
Sbjct: 182 ---------HDHTGFLTEY-----------------------------------VATRWY 197
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
            APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+ 
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 253
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
                             P +N                 L+ ++L  +P KRI VE+   
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 334 HEFFK 338
           H + +
Sbjct: 314 HPYLE 318

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +Y     L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF L   L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 155
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 156 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF         + F+R            +  ++LIR  L 
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 240
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDV 261

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 246 GTEEYVAPEII--EGKGHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRILCR--- 299
           GT E++ PE    E   +   VD WSLG+ L+ M Y   PF    S  E F  I  +   
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 300 -PPDLVGEPTPLRN----------------LIRRLLEKDPTKRIGVEEIKGHEFFKGVNW 342
            P D      PL N                 ++  L K+P +RI  E+   HE+    N 
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI 331
Query: 343 ELLLKISR 350
           E L + S+
Sbjct: 332 EDLREFSK 339

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++D+ L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 23  LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 71
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K       +DD ++F   
Sbjct: 72  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK---LTDDHVQFLIY 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++DF L+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 74/201 (36%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 188
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 189 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 221
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF         + F+R               ++LIR  L 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------XECQHLIRWCLA 273
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDV 294

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 28  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 70  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++     + + DF L+    P          
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD--------- 177
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
                         FL+++                                   V T  Y
Sbjct: 178 ---------HDHTGFLTEY-----------------------------------VATRWY 193
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
            APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+ 
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 249
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
                             P +N                 L+ ++L  +P KRI VE+   
Sbjct: 250 EDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 334 HEFFK 338
           H + +
Sbjct: 310 HPYLE 314

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 69
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 74/201 (36%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 188
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 189 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 221
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF         + F+R               ++LIR  L 
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------XECQHLIRWCLA 273
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDV 294

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 74/201 (36%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           HN G+++RD+K ENI+I  N G + L+DF                               
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
                   SG  L+D V+                      F GT  Y  PE I   + H 
Sbjct: 188 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 220
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
            +   WSLG++L++M+ G  PF         + F+R               ++LIR  L 
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------XECQHLIRWCLA 272
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
             P+ R   EEI+ H + + V
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDV 293

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 31  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 73
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 74  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 133
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 69
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 46  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 88
Query: 83  VEHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR      G    + ++   +DY P       R   +++Q      ++    
Sbjct: 89  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 148
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 35  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 77
Query: 83  VEHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR      G    + ++   +DY P       R   +++Q      ++    
Sbjct: 78  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 39  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 81
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 82  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 69
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 28  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 70
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 71  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 130
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R +
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 75
Query: 84  EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
           +H  + RLR      G    + ++   +DY P       R   +++Q      ++     
Sbjct: 76  DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                   H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           ++ +  Y APE+I G   +  ++D WS G VL E+L G   F G S  +    I+     
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 242
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
           ++G PT                      P   + R            RLLE  PT R+  
Sbjct: 243 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 302
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
            E   H FF  +  +  +K+    + PA F     E        T  I     +Q   + 
Sbjct: 303 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 361
Query: 389 GGDAEQKNEVN 399
             +A   ++ N
Sbjct: 362 PTNATAASDAN 372

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R +
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 82
Query: 84  EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
           +H  + RLR      G    + ++   +DY P       R   +++Q      ++     
Sbjct: 83  DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                   H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R +
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 104
Query: 84  EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
           +H  + RLR      G    + ++   +DY P       R   +++Q      ++     
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                   H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R +
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 98
Query: 84  EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
           +H  + RLR      G    + ++   +DY P       R   +++Q      ++     
Sbjct: 99  DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                   H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           ++ +  Y APE+I G   +  ++D WS G VL E+L G   F G S  +    I+     
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 265
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
           ++G PT                      P   + R            RLLE  PT R+  
Sbjct: 266 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 325
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
            E   H FF  +  +  +K+    + PA F     E        T  I     +Q   + 
Sbjct: 326 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 384
Query: 389 GGDAEQKNEVN 399
             +A   ++ N
Sbjct: 385 PTNATAASDAN 395

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 40  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 82
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 83  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 142
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R +
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 106
Query: 84  EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
           +H  + RLR      G    + ++   +DY P       R   +++Q      ++     
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                   H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           ++ +  Y APE+I G   +  ++D WS G VL E+L G   F G S  +    I+     
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 273
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
           ++G PT                      P   + R            RLLE  PT R+  
Sbjct: 274 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 333
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
            E   H FF  +  +  +K+    + PA F     E        T  I     +Q   + 
Sbjct: 334 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 392
Query: 389 GGDAEQKNEVN 399
             +A   ++ N
Sbjct: 393 PTNATAASDAN 403

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 2   NDVVNDRPIRSLDFSC----------LRIVSALGRGAKGVVFLVKDVESSESFALKVIWR 51
            DV   RP    D++            ++V  LGRG    VF   ++ ++E   +K++  
Sbjct: 13  TDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL-- 70
Query: 52  DLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG---VLSTDKFVGYAIDYC 108
                  K +  N       +I  E ++L N        LRG   +++    V   +   
Sbjct: 71  -------KPVKKN-------KIKREIKILEN--------LRGGPNIITLADIVKDPVSRT 108
Query: 109 PGRDLHSLRKQQSEQMF---SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QEN 164
           P      +     +Q++   +D  IRF            H+MGI++RD+KP N+MI  E+
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 165 GHIMLVDFDLSTKLSP 180
             + L+D+ L+    P
Sbjct: 169 RKLRLIDWGLAEFYHP 184

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R +
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 104
Query: 84  EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
           +H  + RLR      G    + ++   +DY P       R   +++Q      ++     
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                   H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           ++ +  Y APE+I G   +  ++D WS G VL E+L G   F G S  +    I+     
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 271
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
           ++G PT                      P   + R            RLLE  PT R+  
Sbjct: 272 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 331
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
            E   H FF  +  +  +K+    + PA F     E        T  I     +Q   + 
Sbjct: 332 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 390
Query: 389 GGDAEQKNEVN 399
             +A   ++ N
Sbjct: 391 PTNATAASDAN 401

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R +
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 108
Query: 84  EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
           +H  + RLR      G    + ++   +DY P       R   +++Q      ++     
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                   H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           ++ +  Y APE+I G   +  ++D WS G VL E+L G   F G S  +    I+     
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 275
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
           ++G PT                      P   + R            RLLE  PT R+  
Sbjct: 276 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 335
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
            E   H FF  +  +  +K+    + PA F     E        T  I     +Q   + 
Sbjct: 336 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 394
Query: 389 GGDAEQKNEVN 399
             +A   ++ N
Sbjct: 395 PTNATAASDAN 405

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 149
Query: 84  EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
           +H  + RLR      G    + ++   +DY P       R   +++Q      ++     
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                   H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           ++ +  Y APE+I G   +  ++D WS G VL E+L G   F G S  +    I+     
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 316
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
           ++G PT                      P   + R            RLLE  PT R+  
Sbjct: 317 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 376
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
            E   H FF  +  +  +K+    + PA F     E        T  I     +Q   + 
Sbjct: 377 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 435
Query: 389 GGDAEQKNEVN 399
             +A   ++ N
Sbjct: 436 PTNATAASDAN 446

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K + +D      K   N            E +++R 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 69
Query: 83  VEHPLLPRLRGVLSTDK------FVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +        ++   +DY P       R   +++Q      ++    
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET--------FYR 295
           FVGT  Y++PE +    ++   D WSLG +L+E+     PF   S+KE         F R
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 296 ILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
           I  R  D + E      +I R+L      R  VEEI
Sbjct: 236 IPYRYSDELNE------IITRMLNLKDYHRPSVEEI 265

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET--------FYR 295
           FVGT  Y++PE +    ++   D WSLG +L+E+     PF   S+KE         F R
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 296 ILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
           I  R  D + E      +I R+L      R  VEEI
Sbjct: 236 IPYRYSDELNE------IITRMLNLKDYHRPSVEEI 265

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET--------FYR 295
           FVGT  Y++PE +    ++   D WSLG +L+E+     PF   S+KE         F R
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 296 ILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
           I  R  D + E      +I R+L      R  VEEI
Sbjct: 236 IPYRYSDELNE------IITRMLNLKDYHRPSVEEI 265

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +      L S  ++   Q F+   +     
Sbjct: 67  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 125
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 179 RGG------------------KIPIR----------------------------WTSPEA 192
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 248
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQI 271

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ E++ G   F+G+   + + +++    + 
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVI----EQ 240
Query: 304 VGEPT-----PLRNLIRRLLEKDP 322
           +G P+      L+  +R  +E  P
Sbjct: 241 LGTPSAEFMAALQPTVRNYVENRP 264

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 48/198 (24%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA-NTRSGIKKRR 203
           H+ G+++RDLKP NI    +  + + DF L T +     + +  T + A  T  G     
Sbjct: 181 HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ---- 236
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
                                                    VGT+ Y++PE I G  +  
Sbjct: 237 -----------------------------------------VGTKLYMSPEQIHGNNYSH 255
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRN-LIRRLLEKDP 322
            VD +SLG++L E+LY  +      R  T  R L + P L  +  P  + +++ +L   P
Sbjct: 256 KVDIFSLGLILFELLYSFSTQMERVRIITDVRNL-KFPLLFTQKYPQEHMMVQDMLSPSP 314
Query: 323 TKRIGVEEIKGHEFFKGV 340
           T+R    +I  +  F+ +
Sbjct: 315 TERPEATDIIENAIFENL 332

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K +       + K   N            E +++R 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNR-----------ELQIMRK 69
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ E++ G+  F+G+   + + +++    + 
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVI----EQ 238
Query: 304 VGEPT-----PLRNLIRRLLEKDPTKR-IGVEEI 331
           +G P+      L+  +R  +E  P    I  EE+
Sbjct: 239 LGTPSAEFMAALQPTVRNYVENRPAYPGIAFEEL 272

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +      L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGE 306
           Y +PE++ G  +D A+D WSLG +L EM  G   F G++  +   +I   L  PP  + +
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283
Query: 307 PTPLRNLIRRLLEKDP 322
             P     R+  EK P
Sbjct: 284 QAP---KARKFFEKLP 296

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 129/359 (35%), Gaps = 112/359 (31%)
Query: 9   PIRSLDFSC--LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDN 66
           P +  DF+   L+ +  +GRGA G V  +    S +  A+K I   + EK+ K+L  + +
Sbjct: 13  PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD 72
Query: 67  GDKYRRISFEQRVLRNVEHPLLPRLRGVL---------------STDKFVGYAIDYCPGR 111
                       V+R+ + P + +  G L               S DKF  Y        
Sbjct: 73  -----------VVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSV---- 117
Query: 112 DLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVD 171
               L     E++    T+               N+ I++RD+KP NI++  +G+I    
Sbjct: 118 ----LDDVIPEEILGKITL----ATVKALNHLKENLKIIHRDIKPSNILLDRSGNI---- 165
Query: 172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGIS--LEDPVHXXXXXXXX 229
                                               K C  GIS  L D +         
Sbjct: 166 ------------------------------------KLCDFGISGQLVDSIAKTRD---- 185
Query: 230 XXXXXXXXXXXXXXFVGTEEYVAPEIIEG----KGHDFAVDWWSLGVVLHEMLYGATPF- 284
                           G   Y+APE I+     +G+D   D WSLG+ L+E+  G  P+ 
Sbjct: 186 ---------------AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP 230
Query: 285 RGSSRKETFYRIL-CRPPDLVG----EPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
           + +S  +   +++   PP L      E +P   N +   L KD +KR   +E+  H F 
Sbjct: 231 KWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/318 (21%), Positives = 108/318 (33%), Gaps = 64/318 (20%)
Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           + +D SC++I   +G G  G V          S  LK+  +  I    K L +     + 
Sbjct: 28  KEIDISCVKIEQVIGAGEFGEVC---------SGHLKLPGKREIFVAIKTLKSGYTEKQR 78
Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R    E  ++   +HP +  L GV++    V    ++     L S  +Q   Q F+   +
Sbjct: 79  RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 137
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
                          +M  V+RDL   NI++  N    + DF LS  L   T   +  + 
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
           L                           P+                             +
Sbjct: 198 LGGKI-----------------------PI----------------------------RW 206
Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRIL--CRPPDLVGEP 307
            APE I+ +    A D WS G+V+ E M YG  P+   + ++    I    R P  +  P
Sbjct: 207 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP 266
Query: 308 TPLRNLIRRLLEKDPTKR 325
           + L  L+    +KD   R
Sbjct: 267 SALHQLMLDCWQKDRNHR 284

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGE 306
           Y +PE++ G  +D A+D WSLG +L EM  G   F G++  +   +I   L  PP  + +
Sbjct: 205 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 264
Query: 307 PTPLRNLIRRLLEKDP 322
             P     R+  EK P
Sbjct: 265 QAP---KARKFFEKLP 277

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGE 306
           Y +PE++ G  +D A+D WSLG +L EM  G   F G++  +   +I   L  PP  + +
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283
Query: 307 PTPLRNLIRRLLEKDP 322
             P     R+  EK P
Sbjct: 284 QAP---KARKFFEKLP 296

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 65/263 (24%)
Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           E  ++   +HP + RL GV++  K V    +      L S  ++   Q F+   +     
Sbjct: 96  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
                     +MG V+RDL   NI+I  N    + DF LS  L    P+A      A  T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
           R G                  + P+                             + +PE 
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
           I  +    A D WS G+VL E M YG  P+   S ++        YR+   PP +   P 
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
            L  L+    +KD   R   E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++ F L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISFE 76
           I   +GRG+ G V+L  D  + ++ A+K + R   DLI+ K              RI  E
Sbjct: 30  IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCK--------------RILRE 75
Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
             +L  ++   + RL  ++  D  +     Y +      DL  L K  +    +++ I+ 
Sbjct: 76  ITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK--TPIFLTEEHIKT 133
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                       H  GI++RDLKP N ++ ++  + + DF L+
Sbjct: 134 ILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+     F G    + + +++    + 
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI----EQ 245
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 246 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 291
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 292 NKLKASQARDLLSKMLVIDASKRISVDEALQ 322

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 28  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 70  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 157
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 158 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 192
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 248
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 333 GHEFFK 338
            H + +
Sbjct: 309 AHPYLE 314

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 30  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 71
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 72  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 159
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 160 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 194
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 250
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 333 GHEFFK 338
            H + +
Sbjct: 311 AHPYLE 316

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 48  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 89
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 90  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 146
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 177
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 178 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 212
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 268
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 333 GHEFFK 338
            H + +
Sbjct: 329 AHPYLE 334

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+     F G    + + +++    + 
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI----EQ 234
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
           +G P P    +++L    PT R  VE       + G ++E L      P++  PA  EH 
Sbjct: 235 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 280
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
           N     + R         D +K I V++ +Q
Sbjct: 281 NKLKASQARDLLSKMLVIDASKRISVDEALQ 311

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 36  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 77
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 78  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 134
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 135 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 165
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 166 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 200
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 256
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 257 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 316
Query: 333 GHEFFK 338
            H + +
Sbjct: 317 AHPYLE 322

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 28  LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 70  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 157
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 158 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 192
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 248
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 333 GHEFFK 338
            H + +
Sbjct: 309 AHPYLE 314

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++D  L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           ++ +  Y APE+I G  H   AVD WS+G +  EM+ G   FRG +     + I+     
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV----R 246
Query: 303 LVGEPTPLRNLIRRL 317
           ++G P+  R ++R+L
Sbjct: 247 VLGCPS--REVLRKL 259

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 26  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 67
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 68  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 124
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 155
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 156 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 190
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 246
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 333 GHEFFK 338
            H + +
Sbjct: 307 AHPYLE 312

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 94/280 (33%), Gaps = 72/280 (25%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S LG G  GVV  V+   S       ++ R LI  + K    N       +I  E +VL
Sbjct: 21  ISELGAGNGGVVTKVQHRPSG-----LIMARKLIHLEIKPAIRN-------QIIRELQVL 68
Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
                P +    G   +D  +   +++  G  L  + K+ ++++  +   +         
Sbjct: 69  HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGL 127
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
                   I++RD+KP NI++   G I                                 
Sbjct: 128 AYLREKHQIMHRDVKPSNILVNSRGEI--------------------------------- 154
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
                  K C  G+S +                          FVGT  Y+APE ++G  
Sbjct: 155 -------KLCDFGVSGQ------------------LIDSMANSFVGTRSYMAPERLQGTH 189
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP 300
           +    D WS+G+ L E+  G  P      KE    I  RP
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYPIPPPDAKE-LEAIFGRP 228

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 33  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 74
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 75  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 131
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 162
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 163 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 197
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 253
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 333 GHEFFK 338
            H + +
Sbjct: 314 AHPYLE 319

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 34  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 75
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 76  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 132
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 133 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 163
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 164 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 198
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 254
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 255 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 314
Query: 333 GHEFFK 338
            H + +
Sbjct: 315 AHPYLE 320

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 25  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 66
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 67  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 123
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 124 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 154
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 155 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 189
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 245
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 246 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 305
Query: 333 GHEFFK 338
            H + +
Sbjct: 306 AHPYLE 311

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 32  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 73
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 74  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 161
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 162 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 196
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 252
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 333 GHEFFK 338
            H + +
Sbjct: 313 AHPYLE 318

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 89/265 (33%), Gaps = 99/265 (37%)
Query: 112 DLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVD 171
           DL+ L K Q     S+D I +            H+  +++RDLKP N++I          
Sbjct: 131 DLYKLLKSQQ---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLI---------- 177
Query: 172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXX 230
                                 NT   +K         C  G++ + DP H         
Sbjct: 178 ----------------------NTTCDLK--------ICDFGLARIADPEHDHTGFLTEX 207
Query: 231 XXXXXXXXXXXXXFVGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR 289
                         V T  Y APEI +  KG+  ++D WS+G +L EML     F G   
Sbjct: 208 --------------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 290 KETFYRILCRPPDLVGEPT----------PLRN--------------------------L 313
            +    IL     ++G P+            RN                          L
Sbjct: 254 LDQLNHIL----GILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDL 309
Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFK 338
           + R+L  +P KRI VEE   H + +
Sbjct: 310 LDRMLTFNPNKRITVEEALAHPYLE 334

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K +       + K   N            E +++R 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNR-----------ELQIMRK 69
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 23  ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
            +G G+ GVV+  K  +S E  A+K +       + K   N            E +++R 
Sbjct: 27  VIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNR-----------ELQIMRK 69
Query: 83  VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
           ++H  + RLR    +      + ++   +DY P       R   +++Q      ++    
Sbjct: 70  LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
                    H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P  S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 32  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 73
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 74  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 161
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 162 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 196
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 252
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 333 GHEFFK 338
            H + +
Sbjct: 313 AHPYLE 318

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++D  L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA 172

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G V    D ++    A+K        K S+   +  +  +  R   E R+L
Sbjct: 27  LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81  RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
           ++++H     LL       S ++F   Y + +  G DL+++ K Q     +DD ++F   
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                    H+  I++RDLKP N+ + E+  + ++D  L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA 172

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 114/324 (35%), Gaps = 66/324 (20%)
Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           + ++ SC+ I   +G G  G V          S  LK+  +  +    K L       + 
Sbjct: 17  KEIEASCITIERVIGAGEFGEVC---------SGRLKLPGKRELPVAIKTLKVGYTEKQR 67
Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R    E  ++   +HP +  L GV++  K V    +Y     L +  K+   Q F+   +
Sbjct: 68  RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQL 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
                          +MG V+RDL   NI+I  N    + DF LS  L    P+A     
Sbjct: 127 VGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA----- 180
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
            A  TR G                  + P+                             +
Sbjct: 181 -AYTTRGG------------------KIPIR----------------------------W 193
Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEP 307
            APE I  +    A D WS G+V+ E++ YG  P+   + ++    +    R P  +  P
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCP 253
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEI 331
             L  L+    +K+   R   +EI
Sbjct: 254 AALYQLMLDCWQKERNSRPKFDEI 277

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 121/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A+K I                    +   ++ QR L
Sbjct: 26  LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 67
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 68  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 124
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 155
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 156 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 190
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP- 307
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P 
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPE 246
Query: 308 ------------------TPLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 333 GHEFFK 338
            H + +
Sbjct: 307 AHPYLE 312

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 29/150 (19%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
           V T  Y APE+I G G+   VD WS+G ++ EM+     F G    + + +++    + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI----EQL 241
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHEN 362
           G P P    +++L    PT R  VE       + G ++E L      P++  PA  EH N
Sbjct: 242 GTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH-N 287
Query: 363 NESDGRGR---------DGTKEIDVEKFVQ 383
                + R         D +K I V++ +Q
Sbjct: 288 KLKASQARDLLSKMLVIDASKRISVDEALQ 317

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKXV 80
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKXV 80
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 73
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK 133
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/366 (19%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21  VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +S +G GA G+V    D  +    A++ I                    +   ++ QR L
Sbjct: 32  LSYIGEGAYGMVCSAYDNLNKVRVAIRKI------------------SPFEHQTYCQRTL 73
Query: 81  RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R ++  L  R   ++  +  +           Y +      DL+ L K Q     S+D I
Sbjct: 74  REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            +            H+  +++RDLKP N+++                             
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 161
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
              NT   +K         C  G++ + DP H                      +V T  
Sbjct: 162 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 196
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y APEI +  KG+  ++D WS+G +L EML     F G    +    IL     ++G P+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 252
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
                              P +N                 L+ ++L  +P KRI VE+  
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 333 GHEFFK 338
            H + +
Sbjct: 313 AHPYLE 318

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 120 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179
Query: 178 LSP 180
             P
Sbjct: 180 YHP 182

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 127 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 186
Query: 178 LSP 180
             P
Sbjct: 187 YHP 189

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 50/139 (35%), Gaps = 45/139 (32%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY---RILCRP 300
            V T  Y APE+I   G     D WS+G +L E   G T F     KE      RIL   
Sbjct: 194 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL 253
Query: 301 PDLVGEPT----------------------------PLR--------------NLIRRLL 318
           P  + + T                            PL+              +LI+++L
Sbjct: 254 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKML 313
Query: 319 EKDPTKRIGVEEIKGHEFF 337
           E DP KRI + E   H FF
Sbjct: 314 EYDPAKRITLREALKHPFF 332

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---PD 302
           G   ++APE+I         D WS GV+L E+L G  PFRG       Y +       P 
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI 235
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
               P P   L+      DP  R
Sbjct: 236 PSTCPEPFAKLMEDCWNPDPHSR 258

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 70  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 118
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 178
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+     F G    + + +++    + 
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 278
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
           +G P P     L+  +R  +E  P
Sbjct: 279 LGTPCPEFMKKLQPTVRNYVENRP 302

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
Query: 178 LSP 180
             P
Sbjct: 181 YHP 183

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 26  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 74
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 75  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 617 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 645

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
Query: 178 LSP 180
             P
Sbjct: 181 YHP 183

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
           +Q  Q  +D  IRF            H+MGI++RD+KP N+MI  E+  + L+D+ L+  
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
             P
Sbjct: 182 YHP 184

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 70  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 118
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 178
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+     F G    + + +++    + 
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 278
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
           +G P P     L+  +R  +E  P
Sbjct: 279 LGTPCPEFMKKLQPTVRNYVENRP 302

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 617 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 645

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 33  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 81
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 82  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 25  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 73
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 133
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 31  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 79
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 80  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 139
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 26  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 74
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 75  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 237 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 265

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 33  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 81
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 82  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 127/357 (35%), Gaps = 78/357 (21%)
Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           + +D SC++I   +G G  G V          S  LKV  +  I    K L       + 
Sbjct: 9   KEIDASCIKIEKVIGVGEFGEVC---------SGRLKVPGKREICVAIKTLKAGYTDKQR 59
Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
           R    E  ++   +HP +  L GV++  K V    +Y     L + LRK      F+   
Sbjct: 60  RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQ 117
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +               +M  V+RDL   NI++  N    + DF +S  L    P+A    
Sbjct: 118 LVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEA---- 172
Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
             A  TR G                  + P+                             
Sbjct: 173 --AYTTRGG------------------KIPIR---------------------------- 184
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRIL--CRPPDLVGE 306
           + APE I  +    A D WS G+V+ E M YG  P+   S ++    I    R P  +  
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 244
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN 363
           P  L  L+    +K+ + R         +F + VN  +L K+ R PN   R   E++
Sbjct: 245 PIALHQLMLDCWQKERSDR--------PKFGQIVN--MLDKLIRNPNSLKRTGSESS 291

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 264
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 265 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 293

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 127/357 (35%), Gaps = 78/357 (21%)
Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           + +D SC++I   +G G  G V          S  LKV  +  I    K L       + 
Sbjct: 24  KEIDASCIKIEKVIGVGEFGEVC---------SGRLKVPGKREICVAIKTLKAGYTDKQR 74
Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
           R    E  ++   +HP +  L GV++  K V    +Y     L + LRK      F+   
Sbjct: 75  RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQ 132
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +               +M  V+RDL   NI++  N    + DF +S  L    P+A    
Sbjct: 133 LVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEA---- 187
Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
             A  TR G                  + P+                             
Sbjct: 188 --AYTTRGG------------------KIPIR---------------------------- 199
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRIL--CRPPDLVGE 306
           + APE I  +    A D WS G+V+ E M YG  P+   S ++    I    R P  +  
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 259
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN 363
           P  L  L+    +K+ + R         +F + VN  +L K+ R PN   R   E++
Sbjct: 260 PIALHQLMLDCWQKERSDR--------PKFGQIVN--MLDKLIRNPNSLKRTGSESS 306

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 237 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 265

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 238
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 239 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 267

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 234 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G GA+G+V    D     + A+K        K S+   N  +  +  R   E  +++ V
Sbjct: 32  IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKXV 80
Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
            H  +  L  V +  K +    D     +L      Q  QM  D + + +          
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             H+ GI++RDLKP NI+++ +  + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 237 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 265

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 241
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 242 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 270

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
           +++APE I  +    A D W  GV + E+L +G  PF+G    +   RI     L  PP+
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 239
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  L +L+ +    DP++R    E+K  
Sbjct: 240 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 268

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	426
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	9e-92
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-87
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-83
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-83
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	8e-83
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-82
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-81
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-80
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	4e-80
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	7e-80
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	8e-80
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	8e-78
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-77
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-76
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-75
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-75
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-75
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	7e-75
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-75
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	6e-74
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-71
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-70
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-69
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-63
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-59
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-59
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-59
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-56
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-55
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-54
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-53
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-53
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-53
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-51
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-50
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-48
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-47
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-47
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	9e-47
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-46
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-46
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-46
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-46
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-46
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-46
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-46
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-45
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-45
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-45
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-45
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-45
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-45
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-45
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-45
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-45
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-45
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-45
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	9e-45
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-44
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-44
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-44
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	9e-44
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-43
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-43
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-43
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-43
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-43
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-40
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-42
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-42
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-42
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-42
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-42
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-42
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-42
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	7e-42
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-41
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	4e-41
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-41
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	9e-41
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-40
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-40
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-40
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-40
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-40
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-40
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-38
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-38
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-38
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-38
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-37
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-37
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	9e-37
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-35
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-31
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-29
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-29
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-29
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-29
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-29
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-28
3fme_A	290	Dual specificity mitogen-activated protein kinase;	5e-28
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-28
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-22
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-27
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-26
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-26
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-26
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-26
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-25
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-22
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-25
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-21
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-25
3an0_A	340	Dual specificity mitogen-activated protein kinase;	7e-25
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-24
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-21
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-24
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-24
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-23
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-23
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-22
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-22
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-22
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-22
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-22
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	7e-22
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-22
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-21
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-21
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-20
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-20
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-19
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-19
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-19
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-19
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	9e-19
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-18
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-18
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-12
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-17
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-16
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-08
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-15
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-15
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-15
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-15
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-15
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-13
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-15
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	6e-08
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-15
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	9e-15
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-14
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-08
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-14
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-08
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-14
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-06
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-14
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-14
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	8e-10
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-14
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-10
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-14
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	7e-14
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	9e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-13
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-13
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-13
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-13
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-13
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-13
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	8e-13
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-13
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	7e-10
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-12
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-12
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-09
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-12
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	7e-07
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-12
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	6e-09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-12
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-12
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-12
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	9e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-12
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-12
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-07
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-11
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-06
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-11
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-11
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	5e-11
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-08
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-08
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	6e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	6e-06
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	6e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	7e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-04

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  278 bits (714), Expect = 9e-92
 Identities = 96/352 (27%), Positives = 155/352 (44%), Gaps = 81/352 (23%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-ELTNNDNGDKYRR 72
           DF   +I   LG G+   V L +++ +S  +A+K++ +  I K++K              
Sbjct: 31  DFKFGKI---LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-------- 79

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIR 131
              E+ V+  ++HP   +L      D+ + + + Y    +L   +RK      F +   R
Sbjct: 80  ---ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTR 133

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           FY AE+V ALEYLH  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA   +  
Sbjct: 134 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS-- 191

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                            F                                    GT +YV
Sbjct: 192 -----------------FV-----------------------------------GTAQYV 199

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPL 310
           +PE++  K    + D W+LG ++++++ G  PFR  +    F +I+    D         
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA 259

Query: 311 RNLIRRLLEKDPTKRIG------VEEIKGHEFFKGVNWELLLKISRPPNIPA 356
           R+L+ +LL  D TKR+G         +K H FF+ V WE L +   PP + A
Sbjct: 260 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 310

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  268 bits (687), Expect = 1e-87
 Identities = 106/351 (30%), Positives = 164/351 (46%), Gaps = 85/351 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIW-RDLIEKKSKELTNNDNGDKYRR 72
           DF  LR    LG G+ G V L++   +   +A+KV+    ++  K  E TN+        
Sbjct: 7   DFQILRT---LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND-------- 55

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIR 131
              E+ +L  V HP + R+ G     + +   +DY  G +L S LRK    Q F +   +
Sbjct: 56  ---ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAK 109

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           FYAAE+ LALEYLH+  I+YRDLKPENI++ +NGHI + DF  +  +   T         
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT--------- 160

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
              T              C                                   GT +Y+
Sbjct: 161 --YT-------------LC-----------------------------------GTPDYI 170

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-L 310
           APE++  K ++ ++DWWS G++++EML G TPF  S+  +T+ +IL             +
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDV 230

Query: 311 RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
           ++L+ RL+ +D ++R+G      E++K H +FK V WE LL +    P  P
Sbjct: 231 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEP 281

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  257 bits (660), Expect = 2e-83
 Identities = 113/356 (31%), Positives = 168/356 (47%), Gaps = 88/356 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKY 70
            F  LR+   LG+G  G VF V+ V  + +   FA+KV+ + +I + +K+          
Sbjct: 18  CFELLRV---LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTA-------- 66

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDT 129
                E+ +L  V+HP +  L     T   +   ++Y  G +L   L +   E +F +DT
Sbjct: 67  -HTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER---EGIFMEDT 122

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
             FY AE+ +AL +LH  GI+YRDLKPENIM+   GH+ L DF L             K 
Sbjct: 123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC------------KE 170

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
            +   T +           FC                                   GT E
Sbjct: 171 SIHDGTVT---------HTFC-----------------------------------GTIE 186

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP 309
           Y+APEI+   GH+ AVDWWSLG ++++ML GA PF G +RK+T  +IL    +L   P  
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---PPY 243

Query: 310 L----RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
           L    R+L+++LL+++   R+G       E++ H FF+ +NWE LL +   PP  P
Sbjct: 244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKP 299

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  257 bits (658), Expect = 3e-83
 Identities = 114/357 (31%), Positives = 171/357 (47%), Gaps = 90/357 (25%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVK---DVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
            F  L++   LG+G+ G VFLVK     ++ + +A+KV+ +  ++ + +  T        
Sbjct: 25  QFELLKV---LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM------ 75

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDT 129
                E+ +L  V HP + +L     T+  +   +D+  G DL   L K   E MF+++ 
Sbjct: 76  -----ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK---EVMFTEED 127

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           ++FY AEL LAL++LH++GI+YRDLKPENI++ E GHI L DF LS            K 
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS------------KE 175

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
            +    ++           FC                                   GT E
Sbjct: 176 SIDHEKKA---------YSFC-----------------------------------GTVE 191

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP 309
           Y+APE++  +GH  + DWWS GV++ EML G  PF+G  RKET   IL     +   P  
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM---PQF 248

Query: 310 L----RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPA 356
           L    ++L+R L +++P  R+G     VEEIK H FF  ++W  L  +   PP  PA
Sbjct: 249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPA 305

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  259 bits (663), Expect = 8e-83
 Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 87/365 (23%)

Query: 5   VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-ELTN 63
           + D  +++ D+  +++   +GRGA G V LV+   + + +A+K++ +  + K+S      
Sbjct: 61  IRDLRMKAEDYEVVKV---IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFW 117

Query: 64  NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
                       E+ ++     P + +L      D+++   ++Y PG DL +L    S  
Sbjct: 118 E-----------ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNY 163

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
              +   RFY AE+VLAL+ +H+MG ++RD+KP+N+++ ++GH+ L DF    K++ +  
Sbjct: 164 DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223

Query: 184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS 243
                     +T                                                
Sbjct: 224 VRC-------DT-------------AV--------------------------------- 230

Query: 244 FVGTEEYVAPEIIEGKG----HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC- 298
             GT +Y++PE+++ +G    +    DWWS+GV L+EML G TPF   S   T+ +I+  
Sbjct: 231 --GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288

Query: 299 ----RPPDLVGEPTPLRNLIRRLLEKDPTKRIG---VEEIKGHEFFKGVNWE-LLLKISR 350
                 PD        +NLI   L  D   R+G   VEEIK H FFK   W    L+ + 
Sbjct: 289 KNSLTFPDDNDISKEAKNLICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTV 347

Query: 351 PPNIP 355
            P +P
Sbjct: 348 APVVP 352

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  254 bits (650), Expect = 7e-82
 Identities = 107/354 (30%), Positives = 163/354 (46%), Gaps = 88/354 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  L++   LG+G  G V LV++  +   +A+K++ +++I  K          D+    
Sbjct: 6   DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIR 131
             E RVL+N  HP L  L+    T   + + ++Y  G +L  H       E++F+++  R
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH----LSRERVFTEERAR 108

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           FY AE+V ALEYLH+  +VYRD+K EN+M+ ++GHI + DF L                 
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL----------------- 151

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                             C  GIS                           +F GT EY+
Sbjct: 152 ------------------CKEGISDGA---------------------TMKTFCGTPEYL 172

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL- 310
           APE++E   +  AVDWW LGVV++EM+ G  PF     +  F  IL         P  L 
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF---PRTLS 229

Query: 311 ---RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
              ++L+  LL+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  255 bits (653), Expect = 1e-81
 Identities = 85/355 (23%), Positives = 156/355 (43%), Gaps = 89/355 (25%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRR 72
            F  LR   A+G+G+ G V +V+  ++ + +A+K + +   +E+                
Sbjct: 16  HFEILR---AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-------- 64

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIR 131
              E ++++ +EHP L  L      ++ +   +D   G DL   L++      F ++T++
Sbjct: 65  ---ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ---NVHFKEETVK 118

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
            +  ELV+AL+YL N  I++RD+KP+NI++ E+GH+ + DF+++  L  +T   +     
Sbjct: 119 LFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT----- 173

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                                                                 GT+ Y+
Sbjct: 174 -----------------MA-----------------------------------GTKPYM 181

Query: 252 APEII---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRP---PD 302
           APE+    +G G+ FAVDWWSLGV  +E+L G  P+   S    KE  +         P 
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS 241

Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIG-VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
              +   + +L+++LLE +P +R   + +++   +   +NW+ +  K   P  IP
Sbjct: 242 AWSQ--EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIP 294

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  252 bits (645), Expect = 3e-80
 Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 87/367 (23%)

Query: 5   VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNN 64
           + +  ++  DF  L++   +GRGA   V +VK  ++ + +A+K++ +  + K+       
Sbjct: 53  LKEVRLQRDDFEILKV---IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR------- 102

Query: 65  DNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM 124
               +      E+ VL N +   + +L      + ++   ++Y  G DL +L   +  + 
Sbjct: 103 ---GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL-SKFGER 158

Query: 125 FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
              +  RFY AE+V+A++ +H +G V+RD+KP+NI++   GHI L DF    KL      
Sbjct: 159 IPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218

Query: 185 ASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF 244
            S                                                          
Sbjct: 219 RS-------LV-------------AV---------------------------------- 224

Query: 245 VGTEEYVAPEIIEGKG-------HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
            GT +Y++PEI++  G       +    DWW+LGV  +EM YG TPF   S  ET+ +I+
Sbjct: 225 -GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283

Query: 298 CR------PPDLVGEPTPLRNLIRRLLEKDPTKRIG---VEEIKGHEFFKGVNWELLLKI 348
                   P    G P   R+ I+RLL   P  R+G     + + H FF G++W+ L   
Sbjct: 284 HYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGRGGAGDFRTHPFFFGLDWDGLRDS 342

Query: 349 SRPPNIP 355
             PP  P
Sbjct: 343 -VPPFTP 348

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  251 bits (642), Expect = 4e-80
 Identities = 117/355 (32%), Positives = 169/355 (47%), Gaps = 90/355 (25%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLI-EKKSKELTNNDNGDKYRR 72
           DF  L++   +G+G+ G V L +       +A+KV+ +  I +KK ++   +        
Sbjct: 39  DFHFLKV---IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMS-------- 87

Query: 73  ISFEQRVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTI 130
              E+ VL +NV+HP L  L     T   + + +DY  G +L + L++   E+ F +   
Sbjct: 88  ---ERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR---ERCFLEPRA 141

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           RFYAAE+  AL YLH++ IVYRDLKPENI++   GHI+L DF L             K  
Sbjct: 142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC------------KEN 189

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
           +  N+ +         S FC                                   GT EY
Sbjct: 190 IEHNSTT---------STFC-----------------------------------GTPEY 205

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL 310
           +APE++  + +D  VDWW LG VL+EMLYG  PF   +  E +  IL +P  L      +
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL---KPNI 262

Query: 311 ----RNLIRRLLEKDPTKRIG----VEEIKGHEFFKGVNWELLL--KISRPPNIP 355
               R+L+  LL+KD TKR+G      EIK H FF  +NW+ L+  KI  PP  P
Sbjct: 263 TNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKI-TPPFNP 316

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  249 bits (639), Expect = 7e-80
 Identities = 96/354 (27%), Positives = 151/354 (42%), Gaps = 87/354 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF+ L +   LG+G+ G V L +   + E +A+K++ +D++ +           D     
Sbjct: 21  DFNFLMV---LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----------DDVECT 67

Query: 74  SFEQRVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIR 131
             E+RVL    + P L +L     T   + + ++Y  G DL + +   Q    F +    
Sbjct: 68  MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGRFKEPHAV 124

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           FYAAE+ + L +L + GI+YRDLK +N+M+   GHI + DF +                 
Sbjct: 125 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM----------------- 167

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                             C   I                          + +F GT +Y+
Sbjct: 168 ------------------CKENIWDGV---------------------TTKTFCGTPDYI 188

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL- 310
           APEII  + +  +VDWW+ GV+L+EML G  PF G    E F  I+         P  + 
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---PKSMS 245

Query: 311 ---RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
                + + L+ K P KR+G       +IK H FF+ ++WE L  K  +PP  P
Sbjct: 246 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 299

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  249 bits (637), Expect = 8e-80
 Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 85/351 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF   ++   LG+G+ G VFL +  ++++ FA+K + +D++             D     
Sbjct: 18  DFILHKM---LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD----------DDVECT 64

Query: 74  SFEQRVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTI 130
             E+RVL    EHP L  +     T + + + ++Y  G DL  H     QS   F     
Sbjct: 65  MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH----IQSCHKFDLSRA 120

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            FYAAE++L L++LH+ GIVYRDLK +NI++ ++GHI + DF +                
Sbjct: 121 TFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM---------------- 164

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
                              C   +  +                      K+N+F GT +Y
Sbjct: 165 -------------------CKENMLGDA---------------------KTNTFCGTPDY 184

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL 310
           +APEI+ G+ ++ +VDWWS GV+L+EML G +PF G   +E F+ I    P     P  L
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY---PRWL 241

Query: 311 ----RNLIRRLLEKDPTKRIGV-EEIKGHEFFKGVNWELLL-KISRPPNIP 355
               ++L+ +L  ++P KR+GV  +I+ H  F+ +NWE L  K   PP  P
Sbjct: 242 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRP 292

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  244 bits (625), Expect = 8e-78
 Identities = 96/355 (27%), Positives = 154/355 (43%), Gaps = 88/355 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           +F  +R+   LG+G+ G V L +  E+ + +A+KV+ +D+I +           D     
Sbjct: 24  NFEFIRV---LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD----------DDVECT 70

Query: 74  SFEQRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIR 131
             E+R+L     HP L +L     T   + + +++  G DL   +   Q  + F +   R
Sbjct: 71  MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI---QKSRRFDEARAR 127

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           FYAAE++ AL +LH+ GI+YRDLK +N+++   GH  L DF +             K  +
Sbjct: 128 FYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC------------KEGI 175

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                +         + FC                                   GT +Y+
Sbjct: 176 CNGVTT---------ATFC-----------------------------------GTPDYI 191

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL- 310
           APEI++   +  AVDWW++GV+L+EML G  PF   +  + F  IL         PT L 
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY---PTWLH 248

Query: 311 ---RNLIRRLLEKDPTKRIG------VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
                +++  + K+PT R+G         I  H FFK ++W  L  +   PP  P
Sbjct: 249 EDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRP 303

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  245 bits (628), Expect = 4e-77
 Identities = 109/355 (30%), Positives = 162/355 (45%), Gaps = 89/355 (25%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           +F  L++   LG+G  G V LVK+  +   +A+K++ +++I  K          D+    
Sbjct: 149 EFEYLKL---LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHT 195

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIR 131
             E RVL+N  HP L  L+    T   + + ++Y  G +L  H       E++FS+D  R
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH----LSRERVFSEDRAR 251

Query: 132 FYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           FY AE+V AL+YLH+   +VYRDLK EN+M+ ++GHI + DF L                
Sbjct: 252 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL---------------- 295

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
                              C  GI                            +F GT EY
Sbjct: 296 -------------------CKEGIKDGA---------------------TMKTFCGTPEY 315

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL 310
           +APE++E   +  AVDWW LGVV++EM+ G  PF     ++ F  IL         P  L
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF---PRTL 372

Query: 311 ----RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
               ++L+  LL+KDP +R+G      +EI  H FF G+ W+ +  K   PP  P
Sbjct: 373 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP 427

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  240 bits (615), Expect = 3e-76
 Identities = 115/363 (31%), Positives = 170/363 (46%), Gaps = 94/363 (25%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKY 70
           +F  L++   LG GA G VFLV+ +   ++   +A+KV+ +  I +K+K           
Sbjct: 55  NFELLKV---LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTT--------- 102

Query: 71  RRISFEQRVLRNVEH-PLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDD 128
                E++VL ++   P L  L     T+  +   +DY  G +L   L +    + F++ 
Sbjct: 103 EHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ---RERFTEH 159

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
            ++ Y  E+VLALE+LH +GI+YRD+K ENI++  NGH++L DF LS K           
Sbjct: 160 EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS-KEFVADETERAY 218

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                               FC                                   GT 
Sbjct: 219 D-------------------FC-----------------------------------GTI 224

Query: 249 EYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPF----RGSSRKETFYRILCRPPD 302
           EY+AP+I+ G   GHD AVDWWSLGV+++E+L GA+PF      +S+ E   RIL   P 
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284

Query: 303 LVGEPTPL----RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPP 352
               P  +    ++LI+RLL KDP KR+G      +EIK H FF+ +NW+ L  K    P
Sbjct: 285 Y---PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAP 341

Query: 353 NIP 355
             P
Sbjct: 342 FKP 344

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  243 bits (623), Expect = 2e-75
 Identities = 87/388 (22%), Positives = 152/388 (39%), Gaps = 94/388 (24%)

Query: 8   RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLI-EKKSKELTNNDN 66
           +P+    F   R+   LGRG  G VF  +   + + +A K + +  + ++K  +      
Sbjct: 180 QPMGEDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMV-- 234

Query: 67  GDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQM 124
                    E+++L  V    +  L     T   +   +    G D+  H     +    
Sbjct: 235 ---------EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285

Query: 125 FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
           F +    FY A++V  LE+LH   I+YRDLKPEN+++ ++G++ + D  L+         
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA--------- 336

Query: 185 ASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF 244
                + A  T++           +                                   
Sbjct: 337 ---VELKAGQTKT---------KGYA---------------------------------- 350

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK----ETFYRILCRP 300
            GT  ++APE++ G+ +DF+VD+++LGV L+EM+    PFR    K    E   R+L + 
Sbjct: 351 -GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA 409

Query: 301 PDL-VGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPN 353
                      ++    LL+KDP KR+G      + ++ H  F+ ++W  L   +  PP 
Sbjct: 410 VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPF 469

Query: 354 IPARFEHENNESDGRGRDGTKEIDVEKF 381
           +P          D R        DV  F
Sbjct: 470 VP----------DSRTVYAKNIQDVGAF 487

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  237 bits (608), Expect = 2e-75
 Identities = 101/373 (27%), Positives = 163/373 (43%), Gaps = 99/373 (26%)

Query: 6   NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
              P+   DF  LR+   +GRG+   V LV+  ++   +A+KV+ ++L+           
Sbjct: 2   AMDPLGLQDFDLLRV---IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-------- 50

Query: 66  NGDKYRRISFEQRVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSE 122
             +    +  E+ V  +   HP L  L     T+  + + I+Y  G DL  H     Q +
Sbjct: 51  --EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH----MQRQ 104

Query: 123 QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
           +   ++  RFY+AE+ LAL YLH  GI+YRDLK +N+++   GHI L D+ +        
Sbjct: 105 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMC------- 157

Query: 183 PQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN 242
                K  L     +         S FC                                
Sbjct: 158 -----KEGLRPGDTT---------STFC-------------------------------- 171

Query: 243 SFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF---------RGSSRKETF 293
              GT  Y+APEI+ G+ + F+VDWW+LGV++ EM+ G +PF           ++    F
Sbjct: 172 ---GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 228

Query: 294 YRILCRPPDLVGEPTPL----RNLIRRLLEKDPTKRIG------VEEIKGHEFFKGVNWE 343
             IL +   +   P  L     ++++  L KDP +R+G        +I+GH FF+ V+W+
Sbjct: 229 QVILEKQIRI---PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 285

Query: 344 LLL-KISRPPNIP 355
           ++  K   PP  P
Sbjct: 286 MMEQKQVVPPFKP 298

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  246 bits (628), Expect = 5e-75
 Identities = 96/354 (27%), Positives = 151/354 (42%), Gaps = 87/354 (24%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF+ L +   LG+G+ G V L +   + E +A+K++ +D++ +           D     
Sbjct: 342 DFNFLMV---LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----------DDVECT 388

Query: 74  SFEQRVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIR 131
             E+RVL    + P L +L     T   + + ++Y  G DL + +   Q    F +    
Sbjct: 389 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGRFKEPHAV 445

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           FYAAE+ + L +L + GI+YRDLK +N+M+   GHI + DF +                 
Sbjct: 446 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM----------------- 488

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                             C   I                          + +F GT +Y+
Sbjct: 489 ------------------CKENIWDGV---------------------TTKTFCGTPDYI 509

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL- 310
           APEII  + +  +VDWW+ GV+L+EML G  PF G    E F  I+         P  + 
Sbjct: 510 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY---PKSMS 566

Query: 311 ---RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
                + + L+ K P KR+G       +IK H FF+ ++WE L  K  +PP  P
Sbjct: 567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 620

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  239 bits (612), Expect = 7e-75
 Identities = 96/367 (26%), Positives = 160/367 (43%), Gaps = 89/367 (24%)

Query: 5   VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIW-RDLIEKKSKELTN 63
           V    +   DF  L++   +GRGA G V +VK   + + FA+K++   +++++       
Sbjct: 66  VKQMRLHREDFEILKV---IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFR 122

Query: 64  NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
                       E+ VL N +   +  L      D  +   +DY  G DL +L   + E 
Sbjct: 123 E-----------ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL-SKFED 170

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
              ++  RFY AE+V+A++ +H +  V+RD+KP+N         +L+D            
Sbjct: 171 RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDN---------ILMD------------ 209

Query: 184 QASPKTVLAANTRSG-IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN 242
                        +G I+     L+ F   G  L+                  D + +S+
Sbjct: 210 ------------MNGHIR-----LADF---GSCLKL---------------MEDGTVQSS 234

Query: 243 SFVGTEEYVAPEIIEGK-----GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
             VGT +Y++PEI++        +    DWWSLGV ++EMLYG TPF   S  ET+ +I+
Sbjct: 235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294

Query: 298 ------CRPPDLVGEPTPLRNLIRRLLEKDPTKRIG---VEEIKGHEFFKGVNWELLLKI 348
                   P  +       ++LIRRL+      R+G   +E+ K H FF G++W+ +   
Sbjct: 295 NHKERFQFPTQVTDVSENAKDLIRRLI-CSREHRLGQNGIEDFKKHPFFSGIDWDNIRNC 353

Query: 349 SRPPNIP 355
              P IP
Sbjct: 354 -EAPYIP 359

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  243 bits (621), Expect = 7e-75
 Identities = 88/360 (24%), Positives = 145/360 (40%), Gaps = 83/360 (23%)

Query: 8   RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLI-EKKSKELTNNDN 66
           +P+    F   R+   LG+G  G V   +   + + +A K + +  I ++K + +  N  
Sbjct: 179 QPVTKNTFRQYRV---LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN-- 233

Query: 67  GDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFS 126
                    E+++L  V    +  L     T   +   +    G DL        +  F 
Sbjct: 234 ---------EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           +    FYAAE+   LE LH   IVYRDLKPENI++ ++GHI + D  L+  +        
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--- 341

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
                    +                                                 G
Sbjct: 342 --------IKG-----------RV-----------------------------------G 347

Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRG----SSRKETFYRILCRPPD 302
           T  Y+APE+++ + + F+ DWW+LG +L+EM+ G +PF+       R+E    +   P +
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE 407

Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
                +P  R+L  +LL KDP +R+G       E+K H  FK +N++ L   +  PP  P
Sbjct: 408 YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKP 467

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  235 bits (602), Expect = 6e-74
 Identities = 99/365 (27%), Positives = 161/365 (44%), Gaps = 99/365 (27%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DF  LR+   +GRG+   V LV+  ++   +A++V+ ++L+             +    +
Sbjct: 53  DFDLLRV---IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD----------EDIDWV 99

Query: 74  SFEQRVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTI 130
             E+ V  +   HP L  L     T+  + + I+Y  G DL  H     Q ++   ++  
Sbjct: 100 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH----MQRQRKLPEEHA 155

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           RFY+AE+ LAL YLH  GI+YRDLK +N+++   GHI L D+ +             K  
Sbjct: 156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMC------------KEG 203

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
           L     +         S FC                                   GT  Y
Sbjct: 204 LRPGDTT---------STFC-----------------------------------GTPNY 219

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF---------RGSSRKETFYRILCRPP 301
           +APEI+ G+ + F+VDWW+LGV++ EM+ G +PF           ++    F  IL +  
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279

Query: 302 DLVGEPTPL----RNLIRRLLEKDPTKRIG------VEEIKGHEFFKGVNWELLL-KISR 350
            +   P  L     ++++  L KDP +R+G        +I+GH FF+ V+W+++  K   
Sbjct: 280 RI---PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 336

Query: 351 PPNIP 355
           PP  P
Sbjct: 337 PPFKP 341

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  237 bits (607), Expect = 1e-71
 Identities = 101/384 (26%), Positives = 165/384 (42%), Gaps = 101/384 (26%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLI-EKKSKELTNNDNGDKYRR 72
           DFS  RI   +GRG  G V+  +  ++ + +A+K + +  I  K+ + L  N        
Sbjct: 190 DFSVHRI---IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN-------- 238

Query: 73  ISFEQRVL---RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDD 128
              E+ +L      + P +  +     T   + + +D   G DLH  L +     +FS+ 
Sbjct: 239 ---ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEA 292

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
            +RFYAAE++L LE++HN  +VYRDLKP NI++ E+GH+ + D  L+   S K P A   
Sbjct: 293 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--- 349

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                                                                    GT 
Sbjct: 350 --------------------SV-----------------------------------GTH 354

Query: 249 EYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRPPDLV 304
            Y+APE+++ G  +D + DW+SLG +L ++L G +PFR    K   E     L    +L 
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP 414

Query: 305 GEPTP-LRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIPAR 357
              +P LR+L+  LL++D  +R+G      +E+K   FF+ ++W+ + L+   PP IP  
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP-- 472

Query: 358 FEHENNESDGRGRDGTKEIDVEKF 381
                        +     D+  F
Sbjct: 473 --------PRGEVNAADAFDIGSF 488

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  223 bits (570), Expect = 2e-70
 Identities = 83/337 (24%), Positives = 138/337 (40%), Gaps = 82/337 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V+L ++ ++    ALKV+++  +EK+  E        + RR   E  +  ++
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-------HQLRR---EIEIQSHL 71

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP + R+       K +   +++ P  +L+   + Q    F +     +  EL  AL Y
Sbjct: 72  RHPNILRMYNYFHDRKRIYLMLEFAPRGELYK--ELQKHGRFDEQRSATFMEELADALHY 129

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
            H   +++RD+KPEN+++   G + + DF  S                            
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWS---------------------------- 161

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                           VH+P              S +  +  GT +Y+ PE+IEGK HD 
Sbjct: 162 ----------------VHAP--------------SLRRRTMCGTLDYLPPEMIEGKTHDE 191

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRLLE 319
            VD W  GV+ +E L G  PF   S  ET  RI+      PP L       ++LI +LL 
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL---SDGSKDLISKLLR 248

Query: 320 KDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPA 356
             P +R+ ++ +  H + K        +   PP   +
Sbjct: 249 YHPPQRLPLKGVMEHPWVK-----ANSRRVLPPVYQS 280

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  220 bits (562), Expect = 2e-69
 Identities = 86/325 (26%), Positives = 139/325 (42%), Gaps = 79/325 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G V+L ++ +S    ALKV+++  +EK   E        + RR   E  +  ++
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 66

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLALE 142
            HP + RL G       V   ++Y P   ++  L+K      F +     Y  EL  AL 
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 123

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           Y H+  +++RD+KPEN+++   G + + DF  S                           
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--------------------------- 156

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                            VH+P              S +     GT +Y+ PE+IEG+ HD
Sbjct: 157 -----------------VHAP--------------SSRRTDLCGTLDYLPPEMIEGRMHD 185

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRLL 318
             VD WSLGV+ +E L G  PF  ++ +ET+ RI       P  +       R+LI RLL
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV---TEGARDLISRLL 242

Query: 319 EKDPTKRIGVEEIKGHEFFKGVNWE 343
           + +P++R  + E+  H +    + +
Sbjct: 243 KHNPSQRPMLREVLEHPWITANSSK 267

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  204 bits (522), Expect = 3e-63
 Identities = 73/347 (21%), Positives = 132/347 (38%), Gaps = 78/347 (22%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
            ++ LG+GA G V   ++   S  +A+K I      + ++        +K   I  E  +
Sbjct: 10  EIAVLGQGAFGQVVKARNALDSRYYAIKKI------RHTE--------EKLSTILSEVML 55

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAI-------------DYCPGRDLHSLRKQQSEQMFS 126
           L ++ H  + R        +     +             +YC    L+ L   ++     
Sbjct: 56  LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQ 114

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
            D       +++ AL Y+H+ GI++RDLKP NI I E+ ++ + DF L+  +        
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
                                                       S++   SS+   S +G
Sbjct: 175 ------------------------------------------LDSQNLPGSSDNLTSAIG 192

Query: 247 TEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PP 301
           T  YVA E+++G GH +  +D +SLG++  EM+Y      G  R     ++       PP
Sbjct: 193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPP 250

Query: 302 DLVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLK 347
           D         + +IR L++ DP KR G   +    +    + + ++K
Sbjct: 251 DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIK 297

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  195 bits (498), Expect = 1e-59
 Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 75/319 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G     F + D ++ E FA K++ + L+ K  +        +K      E  + R++
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR-------EKMSM---EISIHRSL 72

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            H  +    G    + FV   ++ C  R L  L K++  +  ++   R+Y  ++VL  +Y
Sbjct: 73  AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 130

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH   +++RDLK  N+ + E+  + + DF L+TK                     ++   
Sbjct: 131 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK---------------------VEYDG 169

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                 C                                   GT  Y+APE++  KGH F
Sbjct: 170 ERKKVLC-----------------------------------GTPNYIAPEVLSKKGHSF 194

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRLLE 319
            VD WS+G +++ +L G  PF  S  KET+ RI       P  +        +LI+++L+
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHI---NPVAASLIQKMLQ 251

Query: 320 KDPTKRIGVEEIKGHEFFK 338
            DPT R  + E+   EFF 
Sbjct: 252 TDPTARPTINELLNDEFFT 270

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  195 bits (498), Expect = 3e-59
 Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 75/319 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G     F + D ++ E FA K++ + L+ K  +        +K      E  + R++
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR-------EKMSM---EISIHRSL 98

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            H  +    G    + FV   ++ C  R L  L K++  +  ++   R+Y  ++VL  +Y
Sbjct: 99  AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 156

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH   +++RDLK  N+ + E+  + + DF L+TK                     ++   
Sbjct: 157 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK---------------------VEYDG 195

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                 C                                   GT  Y+APE++  KGH F
Sbjct: 196 ERKKVLC-----------------------------------GTPNYIAPEVLSKKGHSF 220

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRLLE 319
            VD WS+G +++ +L G  PF  S  KET+ RI       P  +        +LI+++L+
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHI---NPVAASLIQKMLQ 277

Query: 320 KDPTKRIGVEEIKGHEFFK 338
            DPT R  + E+   EFF 
Sbjct: 278 TDPTARPTINELLNDEFFT 296

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  193 bits (492), Expect = 5e-59
 Identities = 63/319 (19%), Positives = 123/319 (38%), Gaps = 74/319 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G+   V+  + + +    A+K+I +  + K            + +    E ++   +
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMV-------QRVQN---EVKIHCQL 68

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP +  L        +V   ++ C   +++   K +  + FS++  R +  +++  + Y
Sbjct: 69  KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLY 127

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH+ GI++RDL   N+++  N +I + DF L+T+                     +K   
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ---------------------LKMPH 166

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
                 C                                   GT  Y++PEI     H  
Sbjct: 167 EKHYTLC-----------------------------------GTPNYISPEIATRSAHGL 191

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRRLLE 319
             D WSLG + + +L G  PF   + K T  +++      P  L       ++LI +LL 
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL---SIEAKDLIHQLLR 248

Query: 320 KDPTKRIGVEEIKGHEFFK 338
           ++P  R+ +  +  H F  
Sbjct: 249 RNPADRLSLSSVLDHPFMS 267

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  187 bits (476), Expect = 6e-56
 Identities = 71/367 (19%), Positives = 124/367 (33%), Gaps = 94/367 (25%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG----DKYRRIS 74
           RI+  L +G    + L +  + ++ +ALK   + L+EKK     +N++      KY    
Sbjct: 34  RIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK 91

Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL------HSLRKQQSEQMFSDD 128
            E +++ ++++       G+++    V    +Y     +        +  +         
Sbjct: 92  NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151

Query: 129 TIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
            I+     ++ +  Y+HN   I +RD+KP NI         L+D +   KL         
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI---------LMDKNGRVKL--------- 193

Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT 247
                              S F   G S     +                 +K     GT
Sbjct: 194 -------------------SDF---GES----EYMV--------------DKKIKGSRGT 213

Query: 248 EEYVAPEIIEGKG--HDFAVDWWSLGVVLHEMLYGATPFRG-SSRKETFYRIL------- 297
            E++ PE    +   +   VD WSLG+ L+ M Y   PF    S  E F  I        
Sbjct: 214 YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYP 273

Query: 298 -------------CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL 344
                                      + ++  L K+P +RI  E+   HE+    N E 
Sbjct: 274 LDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIED 333

Query: 345 LLKISRP 351
           L + S+ 
Sbjct: 334 LREFSKE 340

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  186 bits (473), Expect = 4e-55
 Identities = 46/342 (13%), Positives = 99/342 (28%), Gaps = 73/342 (21%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRD---------------LIEKKSKELTNNDNGD 68
           LG+          D E+ ESF + V +                 L  +  + + N     
Sbjct: 81  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVG-YAIDYCPGRDLHSL-----RKQQSE 122
            + R  F   ++++ +   + R+R        +  + +      +L +          + 
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200

Query: 123 QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
           +            +++  L  LH+ G+V+  L+P +I++ + G + L  F          
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGF---------- 250

Query: 183 PQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN 242
                              R         S          P   P+              
Sbjct: 251 ---------------EHLVRDGARVVSSVS------RGFEP---PE-------------- 272

Query: 243 SFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
                   ++          F+ D W+LG+V++ +     P    +       I     +
Sbjct: 273 -LEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN 331

Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL 344
           +   P P+R L+   L      R+   +      ++ +  EL
Sbjct: 332 I---PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTEL 370

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  182 bits (463), Expect = 2e-54
 Identities = 63/339 (18%), Positives = 116/339 (34%), Gaps = 75/339 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  LGRG  GVVF  K+     ++A+K I     E   +++              E +
Sbjct: 8   EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR------------EVK 55

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAI------------DYCPGRDLHS-LRKQQSEQMF 125
            L  +EHP + R                             C   +L   +  + + +  
Sbjct: 56  ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
                     ++  A+E+LH+ G+++RDLKP NI    +  + + DF L T +     + 
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175

Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV 245
           +                                              +   +  +    V
Sbjct: 176 T--------------------------------------------VLTPMPAYARHTGQV 191

Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPD 302
           GT+ Y++PE I G  +   VD +SLG++L E+LY   PF     +      +     PP 
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPL 248

Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
              +      +++ +L   P +R     I  +  F+ ++
Sbjct: 249 FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  181 bits (461), Expect = 4e-53
 Identities = 52/383 (13%), Positives = 108/383 (28%), Gaps = 86/383 (22%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVI---------------WRDLIEKKSKELT 62
           L   + LG+          D E+ ESF + V                   L  +  + + 
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139

Query: 63  NNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST----DKFVGYAIDYCPGRDLHSL-- 116
           N      + R  F   ++++ +   + R+R          +F  Y       +    +  
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199

Query: 117 RKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
               + +            +++  L  LH+ G+V+  L+P +I++ + G +         
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGV--------- 250

Query: 177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD 236
                                       FL+ F                      R  + 
Sbjct: 251 ----------------------------FLTGF---EHL---------------VRDGAS 264

Query: 237 SSEKSNSFVGTEEYVAPEIIEGKGHD-----FAVDWWSLGVVLHEMLYGATPFRGSSRKE 291
           +           E  A  ++    H      FA D W+LG+ ++ +     P    +   
Sbjct: 265 AVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG 324

Query: 292 TFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL--LLKIS 349
               I     ++   P P+R L+   L      R+   +      ++ +  EL   L + 
Sbjct: 325 GSEWIFRSCKNI---PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLY 381

Query: 350 RPPNIPARFEHENNESDGRGRDG 372
           +    P R          +  + 
Sbjct: 382 QTDGEPTREGGAPPSGTSQPDEA 404

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  178 bits (453), Expect = 6e-53
 Identities = 69/330 (20%), Positives = 110/330 (33%), Gaps = 74/330 (22%)

Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
            S      + +S LG G+ G VF V+  E    +A+K         K +           
Sbjct: 52  ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA------ 105

Query: 71  RRISFEQRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
                E      V +HP   RL         +    + C G  L    +        +  
Sbjct: 106 -----EVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWG-ASLPEAQ 158

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +  Y  + +LAL +LH+ G+V+ D+KP NI +   G   L DF L  +L           
Sbjct: 159 VWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG------- 211

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
             A   + G                   DP                              
Sbjct: 212 --AGEVQEG-------------------DP-----------------------------R 221

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGAT-PFRGSSRKETFYRILCRPPDLVGEPT 308
           Y+APE+++G  +  A D +SLG+ + E+      P  G   ++     L  P    G  +
Sbjct: 222 YMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL-PPEFTAGLSS 279

Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            LR+++  +LE DP  R   E +      +
Sbjct: 280 ELRSVLVMMLEPDPKLRATAEALLALPVLR 309

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  179 bits (455), Expect = 9e-53
 Identities = 78/349 (22%), Positives = 132/349 (37%), Gaps = 69/349 (19%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  +G G+ G   LVK  E    + +K I  ++    SKE   +           E  
Sbjct: 27  VRLQKIGEGSFGKAILVKSTEDGRQYVIKEI--NISRMSSKEREESRR---------EVA 75

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           VL N++HP + + R     +  +   +DYC G DL      Q   +F +D I  +  ++ 
Sbjct: 76  VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
           LAL+++H+  I++RD+K +N        I L                         T+ G
Sbjct: 136 LALKHVHDRKILHRDIKSQN--------IFL-------------------------TKDG 162

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
             +    L  F   GI+                R  + + E + + +GT  Y++PEI E 
Sbjct: 163 TVQ----LGDF---GIA----------------RVLNSTVELARACIGTPYYLSPEICEN 199

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE--PTPLRNLIRR 316
           K ++   D W+LG VL+E+      F   S K    +I+      V       LR+L+ +
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQ 259

Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNES 365
           L +++P  R  V  I    F      + L           +   +    
Sbjct: 260 LFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQ 308

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  174 bits (442), Expect = 4e-51
 Identities = 60/329 (18%), Positives = 108/329 (32%), Gaps = 73/329 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  LG G    V LV+ +     +ALK I     E++ +E               E  
Sbjct: 32  LFIQKLGEGGFSYVDLVEGLHDGHFYALKRI--LCHEQQDREEAQR-----------EAD 78

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAI----DYCPGRDLHSL--RKQQSEQMFSDDTIRF 132
           + R   HP + RL      ++   +       +     L +   R +      ++D I +
Sbjct: 79  MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW 138

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
               +   LE +H  G  +RDLKP NI++ + G  +L+D     +               
Sbjct: 139 LLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH----------- 187

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                                                     + + +   +   T  Y A
Sbjct: 188 ------------------------------------VEGSRQALTLQDWAAQRCTISYRA 211

Query: 253 PEIIEGKGH---DFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILC---RPPDLVG 305
           PE+   + H   D   D WSLG VL+ M++G  P+    +K ++    +      P    
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPR 271

Query: 306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
             + L  L+  ++  DP +R  +  +   
Sbjct: 272 HSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  172 bits (438), Expect = 2e-50
 Identities = 70/373 (18%), Positives = 129/373 (34%), Gaps = 108/373 (28%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G+ GVV +  + ++    A+K++      K      N  + ++ +    E R+++ +
Sbjct: 34  IGQGSYGVVRVAIENQTRAIRAIKIM-----NKNKIRQINPKDVERIKT---EVRLMKKL 85

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL------------------------------ 113
            HP + RL  V   ++++   ++ C G  L                              
Sbjct: 86  HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145

Query: 114 --------HSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ--E 163
                       ++  + +  +  I     ++  AL YLHN GI +RD+KPEN +    +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205

Query: 164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSP 223
           +  I LVDF LS +                                              
Sbjct: 206 SFEIKLVDFGLSKEFYKLNN---------------------------------------- 225

Query: 224 RIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH--DFAVDWWSLGVVLHEMLYGA 281
                              +  GT  +VAPE++           D WS GV+LH +L GA
Sbjct: 226 ------------GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273

Query: 282 TPFRGSSRKETFYRILCRPPDLVGEPTP-----LRNLIRRLLEKDPTKRIGVEEIKGHEF 336
            PF G +  +T  ++L +                R+L+  LL ++  +R        H +
Sbjct: 274 VPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333

Query: 337 FKGVNWELLLKIS 349
               + + + K+S
Sbjct: 334 ISQFS-DKIYKMS 345

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  164 bits (418), Expect = 8e-48
 Identities = 73/336 (21%), Positives = 131/336 (38%), Gaps = 80/336 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-------------KSKELTNNDNGDKY 70
           +G+G+ GVV L  +   +  +A+KV+ +  + +             +             
Sbjct: 21  IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLS--TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
            ++  E  +L+ ++HP + +L  VL    +  +    +      +  +   +     S+D
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LSED 137

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
             RFY  +L+  +EYLH   I++RD+KP N+++ E+GHI + DF +S +           
Sbjct: 138 QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD------ 191

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                          + LS                                      GT 
Sbjct: 192 ---------------ALLSNTV-----------------------------------GTP 201

Query: 249 EYVAPEIIEGKGHDF---AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---PD 302
            ++APE +      F   A+D W++GV L+  ++G  PF          +I  +    PD
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD 261

Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                  L++LI R+L+K+P  RI V EIK H +  
Sbjct: 262 QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  163 bits (415), Expect = 1e-47
 Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 79/324 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA G V LV++  S     +K I +D  +   +++              E  VL+++
Sbjct: 30  LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA------------EIEVLKSL 77

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFYAAELVLAL 141
           +HP + ++  V      +   ++ C G +L    +  Q   +  S+  +     +++ AL
Sbjct: 78  DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137

Query: 142 EYLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            Y H+  +V++DLKPENI+ Q    +  I ++DF                         G
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDF-------------------------G 172

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                  L++   S                          E S +  GT  Y+APE+ + 
Sbjct: 173 -------LAELFKSD-------------------------EHSTNAAGTALYMAPEVFKR 200

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLI 314
               F  D WS GVV++ +L G  PF G+S +E   +   + P+   E  PL     +L+
Sbjct: 201 D-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLL 259

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFK 338
           +++L KDP +R    ++  HE+FK
Sbjct: 260 KQMLTKDPERRPSAAQVLHHEWFK 283

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  167 bits (424), Expect = 6e-47
 Identities = 70/326 (21%), Positives = 130/326 (39%), Gaps = 78/326 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G+ G V L KD  + +  A+KVI       K + +    + +   R   E ++L+ +
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVI------SKRQ-VKQKTDKESLLR---EVQLLKQL 83

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + +L        +     +   G +L    +  S + FS+        +++  + Y
Sbjct: 84  DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITY 141

Query: 144 LHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           +H   IV+RDLKPEN++++   ++ +I ++DF                         G  
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDF-------------------------G-- 174

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                LS    +                          +K    +GT  Y+APE++ G  
Sbjct: 175 -----LSTHFEAS-------------------------KKMKDKIGTAYYIAPEVLHGT- 203

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           +D   D WS GV+L+ +L G  PF G++  +   ++                   ++LIR
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKGVN 341
           ++L   P+ RI   +   HE+ +   
Sbjct: 264 KMLTYVPSMRISARDALDHEWIQTYT 289

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  161 bits (410), Expect = 9e-47
 Identities = 76/332 (22%), Positives = 115/332 (34%), Gaps = 75/332 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG   VV       + + +A+K+I            +  +  +       E  +LR V
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDV----TGGGSFSAEEVQELREATLKEVDILRKV 80

Query: 84  -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
             HP + +L+    T+ F     D     +L        +   S+   R     L+  + 
Sbjct: 81  SGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FDYLTEKVTLSEKETRKIMRALLEVIC 138

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
            LH + IV+RDLKPENI++ ++ +I L DF                         G    
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDF-------------------------G---- 169

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG---- 258
               S     G  L +                           GT  Y+APEIIE     
Sbjct: 170 ---FSCQLDPGEKLRE-------------------------VCGTPSYLAPEIIECSMND 201

Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----R 311
              G+   VD WS GV+++ +L G+ PF    +      I+                  +
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261

Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
           +L+ R L   P KR   EE   H FF+    E
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQYVVE 293

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  162 bits (411), Expect = 2e-46
 Identities = 78/347 (22%), Positives = 140/347 (40%), Gaps = 78/347 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++  +G+G    V L + + +    A+K+I +  +   S +           ++  E R
Sbjct: 18  RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-----------KLFREVR 66

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +++ + HP + +L  V+ T+K +   ++Y  G ++       +     +   R    ++V
Sbjct: 67  IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGRMKEKEARSKFRQIV 124

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            A++Y H   IV+RDLK EN+++  + +I + DF  S + +                   
Sbjct: 125 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV------------------ 166

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                  L  FC                                   G   Y APE+ +G
Sbjct: 167 ----GGKLDAFC-----------------------------------GAPPYAAPELFQG 187

Query: 259 KGHD-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC----RPPDLVGEPTPLRNL 313
           K +D   VD WSLGV+L+ ++ G+ PF G + KE   R+L      P  +    T   NL
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM---STDCENL 244

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEH 360
           ++R L  +P KR  +E+I    +    + E  LK    P +    + 
Sbjct: 245 LKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQK 291

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  160 bits (407), Expect = 2e-46
 Identities = 67/324 (20%), Positives = 119/324 (36%), Gaps = 78/324 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA  VV       +   FA K+I         K L+  D   K  R   E R+ R +
Sbjct: 14  LGKGAFSVVRRCVHKTTGLEFAAKII------NTKK-LSARDF-QKLER---EARICRKL 62

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + RL   +  + F     D   G +L       + + +S+        +++ ++ Y
Sbjct: 63  QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 120

Query: 144 LHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H+ GIV+R+LKPEN+++    +   + L DF L+ +++                     
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS------------------- 161

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                   F                                    GT  Y++PE+++   
Sbjct: 162 ---EAWHGFA-----------------------------------GTPGYLSPEVLKKDP 183

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           +   VD W+ GV+L+ +L G  PF    +   + +I     D             ++LI 
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
            +L  +P KRI  ++     +   
Sbjct: 244 SMLTVNPKKRITADQALKVPWICN 267

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  161 bits (409), Expect = 2e-46
 Identities = 63/356 (17%), Positives = 106/356 (29%), Gaps = 114/356 (32%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA   VF  +  ++ + FA+KV       +                   E  VL+ +
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR------------EFEVLKKL 64

Query: 84  EHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLA 140
            H  + +L  +          +  ++CP   L++ L +  +     +        ++V  
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 141 LEYLHNMGIVYRDLKPENIMIQ----ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           + +L   GIV+R++KP NIM            L DF  + +L                  
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--------------- 169

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                                                            GTEEY+ P++ 
Sbjct: 170 -------EQFVSLY-----------------------------------GTEEYLHPDMY 187

Query: 257 EG--------KGHDFAVDWWSLGVVLHEMLYGATPFR----GSSRKETFYRILCRPPDLV 304
           E         K +   VD WS+GV  +    G+ PFR        KE  Y+I+   P   
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247

Query: 305 GEPT--------------------------PLRNLIRRLLEKDPTKRIGVEEIKGH 334
                                          L  ++  +LE D  K  G ++    
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  166 bits (421), Expect = 2e-46
 Identities = 73/324 (22%), Positives = 124/324 (38%), Gaps = 68/324 (20%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA G V L K+       A+KVI +   +K      N +    +  I  E  +L+++
Sbjct: 44  LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + +L  V    K+     ++  G +L    +  +   F +        +++  + Y
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKFDECDAANIMKQILSGICY 161

Query: 144 LHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           LH   IV+RD+KPENI+++      +I +VDF                         G  
Sbjct: 162 LHKHNIVHRDIKPENILLENKNSLLNIKIVDF-------------------------G-- 194

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                LS F S                            K    +GT  Y+APE+++ K 
Sbjct: 195 -----LSSFFSKD-------------------------YKLRDRLGTAYYIAPEVLKKK- 223

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           ++   D WS GV+++ +L G  PF G + ++   ++                   + LI+
Sbjct: 224 YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIK 283

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
            +L  D  KR   EE     + K 
Sbjct: 284 LMLTYDYNKRCTAEEALNSRWIKK 307

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  168 bits (426), Expect = 3e-46
 Identities = 70/378 (18%), Positives = 130/378 (34%), Gaps = 104/378 (27%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +   LG G  G V      ++ E  A+K   ++L  K  +            R   E +
Sbjct: 17  EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE------------RWCLEIQ 64

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGY------AIDYCPGRDLHS-LRKQQSEQMFSDDTIR 131
           +++ + HP +   R V    + +        A++YC G DL   L + ++     +  IR
Sbjct: 65  IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR 124

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH---IMLVDFDLSTKLSPKTPQASPK 188
              +++  AL YLH   I++RDLKPENI++Q         ++D   + +L          
Sbjct: 125 TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG------- 177

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                             ++F                                    GT 
Sbjct: 178 ---------------ELCTEFV-----------------------------------GTL 187

Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-------- 300
           +Y+APE++E K +   VD+WS G +  E + G  PF  + +   ++  +           
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247

Query: 301 ---------PDLVGEPTPL--------RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
                      ++  P  L           ++ +L     +R    +      F+ ++  
Sbjct: 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI 307

Query: 344 LLLKISRPPNIPARFEHE 361
           L LK+    N+ +   H 
Sbjct: 308 LSLKLLSVMNMVSGRVHT 325

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  164 bits (418), Expect = 3e-46
 Identities = 74/336 (22%), Positives = 125/336 (37%), Gaps = 79/336 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G+ G V   KD  + + +A+KVI       K+    N D     R    E  +L+ +
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVI------NKAS-AKNKDTSTILR----EVELLKKL 78

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + +L  +L          +   G +L    +    + FS+        ++   + Y
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITY 136

Query: 144 LHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           +H   IV+RDLKPENI+++   ++  I ++DF                         G  
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDF-------------------------G-- 169

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                LS                                K    +GT  Y+APE++ G  
Sbjct: 170 -----LSTCFQQN-------------------------TKMKDRIGTAYYIAPEVLRGT- 198

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           +D   D WS GV+L+ +L G  PF G +  +   R+                   ++LIR
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRP 351
           ++L   P+ RI   +   H + +  + E       P
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLP 294

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  162 bits (412), Expect = 4e-46
 Identities = 67/383 (17%), Positives = 115/383 (30%), Gaps = 119/383 (31%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA   VF  +  ++ + FA+KV       +                   E  VL+ +
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR------------EFEVLKKL 64

Query: 84  EHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLA 140
            H  + +L  +          +  ++CP   L++ L +  +     +        ++V  
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 141 LEYLHNMGIVYRDLKPENIMIQ----ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           + +L   GIV+R++KP NIM            L DF  + +L                  
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--------------- 169

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                                                            GTEEY+ P++ 
Sbjct: 170 -------EQFVSLY-----------------------------------GTEEYLHPDMY 187

Query: 257 EG--------KGHDFAVDWWSLGVVLHEMLYGATPFR----GSSRKETFYRILCRPPDLV 304
           E         K +   VD WS+GV  +    G+ PFR        KE  Y+I+   P   
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247

Query: 305 GEPT--------------------------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                                          L  ++  +LE D  K  G +     +FF 
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD-----QFFA 302

Query: 339 GVNWELLLKISRPPNIPARFEHE 361
             +  L   +    ++     H+
Sbjct: 303 ETSDILHRMVIHVFSLQQMTAHK 325

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  163 bits (415), Expect = 1e-45
 Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 79/324 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA G V L +D  +    A+K+I +  +   S                 E  VL+ +
Sbjct: 45  LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-----------EVAVLKLL 93

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + +L       +     ++   G +L    +      F++        +++  + Y
Sbjct: 94  DHPNIMKLYDFFEDKRNYYLVMECYKGGEL--FDEIIHRMKFNEVDAAVIIKQVLSGVTY 151

Query: 144 LHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           LH   IV+RDLKPEN++++   ++  I +VDF                         G  
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDF-------------------------G-- 184

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                LS    +                          +K    +GT  Y+APE++  K 
Sbjct: 185 -----LSAVFENQ-------------------------KKMKERLGTAYYIAPEVLRKK- 213

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           +D   D WS+GV+L  +L G  PF G + +E   ++                   ++LI+
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK 273

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
           ++L+ D  +RI  ++   H + K 
Sbjct: 274 QMLQFDSQRRISAQQALEHPWIKE 297

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  159 bits (403), Expect = 1e-45
 Identities = 72/321 (22%), Positives = 123/321 (38%), Gaps = 75/321 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVI-WRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           RI   +GRG    V+    +      ALK +   DL++ K++                E 
Sbjct: 35  RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK-----------EI 83

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIRFYAA 135
            +L+ + HP + +       D  +   ++     DL  +    ++ +++  + T+  Y  
Sbjct: 84  DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           +L  ALE++H+  +++RD+KP N+ I                                 T
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFI---------------------------------T 170

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
            +G+ K    L      G+                 R  S  +  ++S VGT  Y++PE 
Sbjct: 171 ATGVVK----LGDL---GLG----------------RFFSSKTTAAHSLVGTPYYMSPER 207

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR--KETFYRIL-CRPPDLVGE--PTPL 310
           I   G++F  D WSLG +L+EM    +PF G          +I  C  P L  +     L
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267

Query: 311 RNLIRRLLEKDPTKRIGVEEI 331
           R L+   +  DP KR  V  +
Sbjct: 268 RQLVNMCINPDPEKRPDVTYV 288

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  157 bits (400), Expect = 2e-45
 Identities = 68/333 (20%), Positives = 124/333 (37%), Gaps = 74/333 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +V  LG GA G V L  +  + E+ A+K++               D  +  ++   E  
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---------DCPENIKK---EIC 57

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           + + + H  + +  G           ++YC G +L    + + +    +   + +  +L+
Sbjct: 58  INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             + YLH +GI +RD+KPEN+++ E  ++ + DF L+T                      
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY------------------ 157

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
              R   L+K C                                   GT  YVAPE+++ 
Sbjct: 158 -NNRERLLNKMC-----------------------------------GTLPYVAPELLKR 181

Query: 259 KGHD-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNL 313
           +      VD WS G+VL  ML G  P+   S     Y                 +    L
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFF-KGVNWELL 345
           + ++L ++P+ RI + +IK   ++ K +     
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  157 bits (399), Expect = 2e-45
 Identities = 66/331 (19%), Positives = 116/331 (35%), Gaps = 78/331 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            ++  +G G+ G    ++     +    K +  D       E     +         E  
Sbjct: 9   EVLYTIGTGSYGRCQKIRRKSDGKILVWKEL--DYGSMTEAEKQMLVS---------EVN 57

Query: 79  VLRNVEHPLLPRLRG--VLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIRFYA 134
           +LR ++HP + R     +  T+  +   ++YC G DL S+  +  +  Q   ++ +    
Sbjct: 58  LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117

Query: 135 AELVLALEYLHNMG-----IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
            +L LAL+  H        +++RDLKP N        + L                    
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPAN--------VFL-------------------- 149

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                      K    L  F   G++                R  +  +  + +FVGT  
Sbjct: 150 -----DGKQNVK----LGDF---GLA----------------RILNHDTSFAKTFVGTPY 181

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE--P 307
           Y++PE +    ++   D WSLG +L+E+     PF   S+KE   +I       +     
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241

Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
             L  +I R+L      R  VEEI  +    
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENPLIL 272

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  157 bits (399), Expect = 3e-45
 Identities = 69/324 (21%), Positives = 122/324 (37%), Gaps = 79/324 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G+ G V   KD  + + +A+KVI +   + K                  E  +L+ +
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-----------EVELLKKL 78

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + +L  +L          +   G +L    +    + FS+        ++   + Y
Sbjct: 79  DHPNIMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITY 136

Query: 144 LHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           +H   IV+RDLKPENI+++   ++  I ++DF                         G  
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDF-------------------------G-- 169

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                LS        ++D                          +GT  Y+APE++ G  
Sbjct: 170 -----LSTCFQQNTKMKD-------------------------RIGTAYYIAPEVLRGT- 198

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           +D   D WS GV+L+ +L G  PF G +  +   R+                   ++LIR
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
           ++L   P+ RI   +   H + + 
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQK 282

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  157 bits (399), Expect = 3e-45
 Identities = 76/325 (23%), Positives = 128/325 (39%), Gaps = 75/325 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   +   + + +A K I      KK + L+++  G     I  E  +LR +
Sbjct: 13  LGSGQFAIVRKCRQKGTGKEYAAKFI------KKRR-LSSSRRGVSREEIEREVNILREI 65

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP +  L  +      V   ++   G +L        ++  ++D    +  +++  + Y
Sbjct: 66  RHPNIITLHDIFENKTDVVLILELVSGGELFD--FLAEKESLTEDEATQFLKQILDGVHY 123

Query: 144 LHNMGIVYRDLKPENIMIQ----ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           LH+  I + DLKPENIM+      N  I L+DF                         G 
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF-------------------------G- 157

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                 ++    +G   ++                           GT E+VAPEI+  +
Sbjct: 158 ------IAHKIEAGNEFKN-------------------------IFGTPEFVAPEIVNYE 186

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D   E         ++ I
Sbjct: 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 246

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKG 339
           RRLL KDP +R+ + +   H + K 
Sbjct: 247 RRLLVKDPKRRMTIAQSLEHSWIKA 271

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  157 bits (400), Expect = 4e-45
 Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 75/338 (22%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+ G V  V D E+    A+K++      KK K     +     ++   E ++LR +
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKIL------KKKKLRRIPNGEANVKK---EIQLLRRL 63

Query: 84  EHPLLPRLRGVLS--TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            H  + +L  VL     + +   ++YC    +  +     E+ F       Y  +L+  L
Sbjct: 64  RHKNVIQLVDVLYNEEKQKMYMVMEYCVC-GMQEMLDSVPEKRFPVCQAHGYFCQLIDGL 122

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           EYLH+ GIV++D+KP N+++   G + +    ++  L P                     
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD----------------- 165

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG-KG 260
                                                       G+  +  PEI  G   
Sbjct: 166 --DTCRTSQ-----------------------------------GSPAFQPPEIANGLDT 188

Query: 261 HD-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIR 315
              F VD WS GV L+ +  G  PF G +  + F  I       P D      PL +L++
Sbjct: 189 FSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDC---GPPLSDLLK 245

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPN 353
            +LE +P KR  + +I+ H +F+  +      +  PP+
Sbjct: 246 GMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPS 283

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  156 bits (397), Expect = 4e-45
 Identities = 67/324 (20%), Positives = 124/324 (38%), Gaps = 81/324 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG+ G V +     +    A K I +  +E            D++++   E  +++++
Sbjct: 17  IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV----------DRFKQ---EIEIMKSL 63

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + RL      +  +   ++ C G +L    +   +++F +        +++ A+ Y
Sbjct: 64  DHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAY 121

Query: 144 LHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H + + +RDLKPEN +      +  + L+DF                         G  
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDF-------------------------G-- 154

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                L+     G  +                            VGT  YV+P+++EG  
Sbjct: 155 -----LAARFKPGKMMRT-------------------------KVGTPYYVSPQVLEGL- 183

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           +    D WS GV+++ +L G  PF   +  E   +I         +          +LIR
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIR 243

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
           RLL K P +RI   +   HE+F+ 
Sbjct: 244 RLLTKSPKQRITSLQALEHEWFEK 267

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  157 bits (400), Expect = 6e-45
 Identities = 76/346 (21%), Positives = 133/346 (38%), Gaps = 83/346 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +S LG GA G V+   D E ++   +K I ++ + +            K  +++ E  
Sbjct: 27  STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWI-----EDPKLGKVTLEIA 81

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDL--HSLRKQQSEQMFSDDTIRFYA 134
           +L  VEH  + ++  +     F    +   +  G DL     R  +      +    +  
Sbjct: 82  ILSRVEHANIIKVLDIFENQGFF-QLVMEKHGSGLDLFAFIDRHPR----LDEPLASYIF 136

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
            +LV A+ YL    I++RD+K ENI+I E+  I L+DF  +  L                
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---------------- 180

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                 +R      FC                                   GT EY APE
Sbjct: 181 ------ERGKLFYTFC-----------------------------------GTIEYCAPE 199

Query: 255 IIEGKGHD-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNL 313
           ++ G  +    ++ WSLGV L+ +++   PF     +ET    +  PP LV     L +L
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE--LEETVEAAI-HPPYLV--SKELMSL 254

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFK------GVNWELLLKISRPPN 353
           +  LL+  P +R  +E++    +           WE + ++++P +
Sbjct: 255 VSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPES 300

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  158 bits (400), Expect = 6e-45
 Identities = 60/369 (16%), Positives = 117/369 (31%), Gaps = 94/369 (25%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVI-------WRDLIEKKSKEL----------- 61
            +  +GRG  GVVF  K+     ++A+K I        R+ + ++ K L           
Sbjct: 10  PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY 69

Query: 62  -------------------TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVG 102
                                 D    +   S       +V+   +       +  +   
Sbjct: 70  FNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129

Query: 103 YAID--------YCPGRDLHSLRKQQSEQMFSD-DTIRFYAAELVLALEYLHNMGIVYRD 153
            +           C   +L     ++      +         ++  A+E+LH+ G+++RD
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRD 189

Query: 154 LKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSG 213
           LKP NI    +  + + DF L T +     + +                           
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT--------------------------- 222

Query: 214 ISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVV 273
                              +   +       VGT+ Y++PE I G  +   VD +SLG++
Sbjct: 223 -----------------VLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLI 265

Query: 274 LHEMLYGATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
           L E+LY  +      R      +     P     +      +++ +L   PT+R    +I
Sbjct: 266 LFELLYSFST--QMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDI 323

Query: 332 KGHEFFKGV 340
             +  F+ +
Sbjct: 324 IENAIFENL 332

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  156 bits (396), Expect = 7e-45
 Identities = 75/322 (23%), Positives = 127/322 (39%), Gaps = 81/322 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V + +   +    A+K++       + K + + D   K +R   E + L+  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKIL------NRQK-IRSLDVVGKIKR---EIQNLKLF 68

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            HP + +L  V+ST       ++Y  G +L  +  +  +      +   R    +++ A+
Sbjct: 69  RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----VEEMEARRLFQQILSAV 124

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           +Y H   +V+RDLKPEN+++  + +  + DF LS                       +  
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN----------------------MMS 162

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
              FL   C S                P                    Y APE+I G+ +
Sbjct: 163 DGEFLRTSCGS----------------PN-------------------YAAPEVISGRLY 187

Query: 262 D-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPLRNLIRR 316
               VD WS GV+L+ +L G  PF        F +I       P  L      +  L+  
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL---NRSVATLLMH 244

Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
           +L+ DP KR  +++I+ HE+FK
Sbjct: 245 MLQVDPLKRATIKDIREHEWFK 266

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  157 bits (398), Expect = 9e-45
 Identities = 74/325 (22%), Positives = 122/325 (37%), Gaps = 75/325 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   ++  +   +A K I      KK +   +     +   I  E  +LR V
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFI------KKRQSRASRRGVSR-EEIEREVSILRQV 72

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            H  +  L  V      V   ++   G +L        ++  S++    +  +++  + Y
Sbjct: 73  LHHNVITLHDVYENRTDVVLILELVSGGELFD--FLAQKESLSEEEATSFIKQILDGVNY 130

Query: 144 LHNMGIVYRDLKPENIMIQ----ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           LH   I + DLKPENIM+        HI L+DF                         G 
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF-------------------------G- 164

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                 L+     G+  ++                           GT E+VAPEI+  +
Sbjct: 165 ------LAHEIEDGVEFKN-------------------------IFGTPEFVAPEIVNYE 193

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D   E         ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKG 339
           R+LL K+  KR+ ++E   H +   
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITP 278

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  157 bits (400), Expect = 1e-44
 Identities = 67/324 (20%), Positives = 118/324 (36%), Gaps = 78/324 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA  VV       +   FA K+I         K L+  D     R    E R+ R +
Sbjct: 37  LGKGAFSVVRRCVHKTTGLEFAAKII------NTKK-LSARDFQKLER----EARICRKL 85

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + RL   +  + F     D   G +L       + + +S+        +++ ++ Y
Sbjct: 86  QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 143

Query: 144 LHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H+ GIV+R+LKPEN+++    +   + L DF                         G  
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADF-------------------------G-- 176

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                L+   +   +                            F GT  Y++PE+++   
Sbjct: 177 -----LAIEVNDSEAWHG-------------------------FAGTPGYLSPEVLKKDP 206

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           +   VD W+ GV+L+ +L G  PF    +   + +I     D             ++LI 
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
            +L  +P KRI  ++     +   
Sbjct: 267 SMLTVNPKKRITADQALKVPWICN 290

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  156 bits (396), Expect = 2e-44
 Identities = 67/325 (20%), Positives = 123/325 (37%), Gaps = 73/325 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +V  LG GA G V L  +  + E+ A+K++               D  +  ++   E  
Sbjct: 10  DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---------DCPENIKK---EIC 57

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           + + + H  + +  G           ++YC G +L    + + +    +   + +  +L+
Sbjct: 58  INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             + YLH +GI +RD+KPEN+++ E  ++ + DF L+T                      
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY------------------ 157

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
              R   L+K C                                   GT  YVAPE+++ 
Sbjct: 158 -NNRERLLNKMC-----------------------------------GTLPYVAPELLKR 181

Query: 259 KGHD-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR-ILCR---PPDLVGEPTPLRNL 313
           +      VD WS G+VL  ML G  P+   S     Y     +           +    L
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFK 338
           + ++L ++P+ RI + +IK   ++ 
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYN 266

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  156 bits (396), Expect = 2e-44
 Identities = 73/325 (22%), Positives = 127/325 (39%), Gaps = 75/325 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   VV   ++  +   +A K I      KK +   ++  G     I  E  +L+ +
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFI------KKRR-TKSSRRGVSREDIEREVSILKEI 71

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP +  L  V      V   ++   G +L        ++  +++    +  +++  + Y
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFD--FLAEKESLTEEEATEFLKQILNGVYY 129

Query: 144 LHNMGIVYRDLKPENIMIQ----ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           LH++ I + DLKPENIM+         I ++DF                         G 
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF-------------------------G- 163

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                 L+     G   ++                           GT E+VAPEI+  +
Sbjct: 164 ------LAHKIDFGNEFKN-------------------------IFGTPEFVAPEIVNYE 192

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKG 339
           RRLL KDP KR+ +++   H + K 
Sbjct: 253 RRLLVKDPKKRMTIQDSLQHPWIKP 277

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  155 bits (394), Expect = 9e-44
 Identities = 76/325 (23%), Positives = 123/325 (37%), Gaps = 75/325 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G   +V   ++  +   +A K I      KK +    +  G     I  E  +LR V
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFI------KKRQ-SRASRRGVCREEIEREVSILRQV 72

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP +  L  V      V   ++   G +L        ++  S++    +  +++  + Y
Sbjct: 73  LHPNIITLHDVYENRTDVVLILELVSGGELF--DFLAQKESLSEEEATSFIKQILDGVNY 130

Query: 144 LHNMGIVYRDLKPENIMIQ----ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           LH   I + DLKPENIM+        HI L+DF                         G 
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF-------------------------G- 164

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                 L+     G+  ++                           GT E+VAPEI+  +
Sbjct: 165 ------LAHEIEDGVEFKN-------------------------IFGTPEFVAPEIVNYE 193

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLI 314
                 D WS+GV+ + +L GA+PF G +++ET   I     D   E         ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKG 339
           R+LL K+  KR+ ++E   H +   
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITP 278

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  154 bits (392), Expect = 2e-43
 Identities = 76/327 (23%), Positives = 116/327 (35%), Gaps = 76/327 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG   VV       +   FA+K++     E  ++ L+     +       E  +LR V
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIM-----EVTAERLSPEQLEEVREATRRETHILRQV 156

Query: 84  -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
             HP +  L     +  F+    D     +L        +   S+   R     L+ A+ 
Sbjct: 157 AGHPHIITLIDSYESSSFMFLVFDLMRKGEL--FDYLTEKVALSEKETRSIMRSLLEAVS 214

Query: 143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           +LH   IV+RDLKPENI++ +N  I L DF                         G    
Sbjct: 215 FLHANNIVHRDLKPENILLDDNMQIRLSDF-------------------------G---- 245

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG---- 258
               S     G  L +                           GT  Y+APEI++     
Sbjct: 246 ---FSCHLEPGEKLRE-------------------------LCGTPGYLAPEILKCSMDE 277

Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----R 311
              G+   VD W+ GV+L  +L G+ PF    +      I+                  +
Sbjct: 278 THPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVK 337

Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           +LI RLL+ DP  R+  E+   H FF+
Sbjct: 338 DLISRLLQVDPEARLTAEQALQHPFFE 364

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  154 bits (391), Expect = 3e-43
 Identities = 85/395 (21%), Positives = 141/395 (35%), Gaps = 86/395 (21%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             V  +G G  GV  L++D  + E  A+K I R     +               +  E  
Sbjct: 23  DFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE--------------NVQREII 68

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
             R++ HP + R + V+ T   +   ++Y  G +L+   +  +   FS+D  RF+  +L+
Sbjct: 69  NHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLL 126

Query: 139 LALEYLHNMGIVYRDLKPENIMIQEN--GHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
             + Y H+M I +RDLK EN ++  +    + + DF  S                     
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK-------------------- 166

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                  S                                         GT  Y+APE++
Sbjct: 167 --SSVLHSQPKSTV-----------------------------------GTPAYIAPEVL 189

Query: 257 EGKGHD-FAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILC---RPPDLVGEPT 308
             + +D    D WS GV L+ ML GA PF         ++T  RIL      PD +    
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249

Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFF-KGVNWELLLKISRPPN--IPARFEHENNES 365
              +LI R+   DP  RI + EIK H +F K +  +L+ + +       P +     +  
Sbjct: 250 ECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTI 309

Query: 366 DGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEVND 400
                + T      + +        D +   +  D
Sbjct: 310 MQIISEATIPAVRNRCLDDFMTDNLDLDDDMDDFD 344

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  153 bits (389), Expect = 4e-43
 Identities = 64/326 (19%), Positives = 127/326 (38%), Gaps = 75/326 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G   VV    + E+ + FA+K++        +K  T++        +  E  +   +
Sbjct: 32  IGKGPFSVVRRCINRETGQQFAVKIV------DVAK-FTSSPGLST-EDLKREASICHML 83

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFYAAELVLAL 141
           +HP +  L    S+D  +    ++  G DL    +++  +  ++S+     Y  +++ AL
Sbjct: 84  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143

Query: 142 EYLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            Y H+  I++RD+KP  +++     +  + L  F ++                       
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI---------------------- 181

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                    +   SG+     V +P                          ++APE+++ 
Sbjct: 182 ---------QLGESGLVAGGRVGTP-------------------------HFMAPEVVKR 207

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNL 313
           + +   VD W  GV+L  +L G  PF G+  +  F  I+     +            ++L
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDL 266

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKG 339
           +RR+L  DP +RI V E   H + K 
Sbjct: 267 VRRMLMLDPAERITVYEALNHPWLKE 292

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  151 bits (385), Expect = 5e-43
 Identities = 80/325 (24%), Positives = 126/325 (38%), Gaps = 83/325 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA   VFLVK   + + FALK I      KKS    ++        +  E  VL+ +
Sbjct: 17  LGSGAFSEVFLVKQRLTGKLFALKCI------KKSPAFRDSS-------LENEIAVLKKI 63

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           +H  +  L  +  +       +    G +L   + ++     +++        +++ A++
Sbjct: 64  KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVK 120

Query: 143 YLHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           YLH  GIV+RDLKPEN++    +EN  IM+ DF LS                        
Sbjct: 121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN------------------- 161

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                 +S  C                                   GT  YVAPE++  K
Sbjct: 162 ----GIMSTAC-----------------------------------GTPGYVAPEVLAQK 182

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLI 314
            +  AVD WS+GV+ + +L G  PF   +  + F +I     +             ++ I
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFI 242

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKG 339
             LLEKDP +R   E+   H +  G
Sbjct: 243 CHLLEKDPNERYTCEKALSHPWIDG 267

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  153 bits (388), Expect = 6e-43
 Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 19/171 (11%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIW-RDLIEKKSKELTNNDNGDKYRR 72
            F  ++    LG G+ G V LVK  ES   +A+K++  + +++ K  E T N        
Sbjct: 42  QFDRIKT---LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-------- 90

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIR 131
              E+R+L+ V  P L +L      +  +   ++Y  G ++ S LR+      FS+   R
Sbjct: 91  ---EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHAR 144

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
           FYAA++VL  EYLH++ ++YRDLKPEN++I + G+I + DF  + ++  +T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  145 bits (367), Expect = 7e-40
 Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 7/124 (5%)

Query: 239 EKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC 298
            ++ +  GT E +APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+ 
Sbjct: 193 GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252

Query: 299 RPPDLVGEPTP-LRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRP 351
                    +  L++L+R LL+ D TKR G     V +IK H++F   +W  +  +    
Sbjct: 253 GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEA 312

Query: 352 PNIP 355
           P IP
Sbjct: 313 PFIP 316

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  151 bits (383), Expect = 1e-42
 Identities = 59/323 (18%), Positives = 109/323 (33%), Gaps = 79/323 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG  G+V    +  S +++  K +      K         +    ++   E  +L   
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFV------KVKGT-----DQVLVKK---EISILNIA 58

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            H  +  L     + + +    ++  G D+   R   S    ++  I  Y  ++  AL++
Sbjct: 59  RHRNILHLHESFESMEELVMIFEFISGLDIFE-RINTSAFELNEREIVSYVHQVCEALQF 117

Query: 144 LHNMGIVYRDLKPENIMIQ--ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           LH+  I + D++PENI+ Q   +  I +++F                         G   
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEF-------------------------G--- 149

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
                ++    G                         +         EY APE+ +    
Sbjct: 150 ----QARQLKPG-------------------------DNFRLLFTAPEYYAPEVHQHDVV 180

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIRR 316
             A D WSLG +++ +L G  PF   + ++    I+        E          + + R
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240

Query: 317 LLEKDPTKRIGVEEIKGHEFFKG 339
           LL K+   R+   E   H + K 
Sbjct: 241 LLVKERKSRMTASEALQHPWLKQ 263

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  152 bits (385), Expect = 2e-42
 Identities = 39/338 (11%), Positives = 94/338 (27%), Gaps = 89/338 (26%)

Query: 20  IVSALGRGAKGVVFLVK-----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS 74
           +   LG GA   V+        D ++ + F LKV       K +          ++   +
Sbjct: 69  VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQ------KPANP-------WEFYIGT 115

Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL---RKQQSEQMFSDDTIR 131
                L+     +  +               +      L +     K   E++     + 
Sbjct: 116 QLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVI 175

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQ-----------ENGHIMLVDFDLSTKLSP 180
            +A  ++  +E +H+  I++ D+KP+N ++             +  + L+D   S  +  
Sbjct: 176 SFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMK- 234

Query: 181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK 240
                             +  + +  +  C                              
Sbjct: 235 ------------------LFPKGTIFTAKC------------------------------ 246

Query: 241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP 300
                 T  +   E++  K  ++ +D++ +   ++ ML+G      +   E     L R 
Sbjct: 247 -----ETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRR 301

Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                           +L       +   ++   +  K
Sbjct: 302 LP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  153 bits (390), Expect = 2e-42
 Identities = 67/324 (20%), Positives = 121/324 (37%), Gaps = 77/324 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+GA  VV     V + + +A  +I         K L+  D+    R    E R+ R +
Sbjct: 19  LGKGAFSVVRRCVKVLAGQEYAAMII------NTKK-LSARDHQKLER----EARICRLL 67

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP + RL   +S +       D   G +L       + + +S+        +++ A+ +
Sbjct: 68  KHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLH 125

Query: 144 LHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
            H MG+V+R+LKPEN+++    +   + L DF L+ ++  +                   
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ------------------ 167

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                   F                                    GT  Y++PE++    
Sbjct: 168 ---QAWFGFA-----------------------------------GTPGYLSPEVLRKDP 189

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIR 315
           +   VD W+ GV+L+ +L G  PF    +   + +I     D             ++LI 
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249

Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
           ++L  +P+KRI   E   H +   
Sbjct: 250 KMLTINPSKRITAAEALKHPWISH 273

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  153 bits (388), Expect = 2e-42
 Identities = 74/329 (22%), Positives = 130/329 (39%), Gaps = 79/329 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA G V L  + ++ +  A+++I      K+   + +    D    +  E  +L+ +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRII-----SKRKFAIGSAREADPALNVETEIEILKKL 197

Query: 84  EHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            HP + +++     + +  Y + +   G +L    K    +   + T + Y  +++LA++
Sbjct: 198 NHPCIIKIKNFFDAEDY--YIVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 253

Query: 143 YLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           YLH  GI++RDLKPEN+++    E+  I + DF  S  L                     
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET------------------ 295

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 296 ----SLMRTLC-----------------------------------GTPTYLAPEVLVSV 316

Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET-FYRILCRPPDLVGEPTPL----- 310
              G++ AVD WSLGV+L   L G  PF     + +   +I     + + E         
Sbjct: 317 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKA 376

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
            +L+++LL  DP  R   EE   H + + 
Sbjct: 377 LDLVKKLLVVDPKARFTTEEALRHPWLQD 405

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  150 bits (382), Expect = 2e-42
 Identities = 71/333 (21%), Positives = 122/333 (36%), Gaps = 77/333 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRG   VV       + + +A K + +    +  +    +           E  VL   
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILH-----------EIAVLELA 85

Query: 84  EH-PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           +  P +  L  V      +   ++Y  G ++ SL   +  +M S++ +     +++  + 
Sbjct: 86  KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145

Query: 143 YLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           YLH   IV+ DLKP+NI++      G I +VDF                         G 
Sbjct: 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF-------------------------G- 179

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                 +S+       L +                          +GT EY+APEI+   
Sbjct: 180 ------MSRKIGHACELRE-------------------------IMGTPEYLAPEILNYD 208

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLI 314
               A D W++G++ + +L   +PF G   +ET+  I     D   E          + I
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFI 268

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLK 347
           + LL K+P KR   E    H + +  ++E L  
Sbjct: 269 QSLLVKNPEKRPTAEICLSHSWLQQWDFENLFH 301

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  150 bits (380), Expect = 5e-42
 Identities = 76/331 (22%), Positives = 129/331 (38%), Gaps = 83/331 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA G V L  + ++ +  A+K+I      K+   + +    D    +  E  +L+ +
Sbjct: 18  LGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKKL 72

Query: 84  EHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            HP + +++     + +  Y + +   G +L    K    +   + T + Y  +++LA++
Sbjct: 73  NHPCIIKIKNFFDAEDY--YIVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 128

Query: 143 YLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           YLH  GI++RDLKPEN+++    E+  I + DF  S  L                     
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET------------------ 170

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG- 258
               S +   C                                   GT  Y+APE++   
Sbjct: 171 ----SLMRTLC-----------------------------------GTPTYLAPEVLVSV 191

Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRG-SSRKETFYRILC-------RPPDLVGEPT 308
              G++ AVD WSLGV+L   L G  PF    ++     +I              V E  
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKA 251

Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
              +L+++LL  DP  R   EE   H + + 
Sbjct: 252 --LDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  149 bits (379), Expect = 7e-42
 Identities = 73/332 (21%), Positives = 129/332 (38%), Gaps = 90/332 (27%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+  +       +S+++FA+K+I       K  E          ++   E   L+  
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKII------SKRME-------ANTQK---EITALKLC 62

Query: 84  -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
             HP + +L  V          ++   G +L    + + ++ FS+    +   +LV A+ 
Sbjct: 63  EGHPNIVKLHEVFHDQLHTFLVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVS 120

Query: 143 YLHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           ++H++G+V+RDLKPEN++     +N  I ++DF  +    P                   
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP--------------- 165

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                           L+ P                           T  Y APE++   
Sbjct: 166 ----------------LKTPC-------------------------FTLHYAAPELLNQN 184

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRG-------SSRKETFYRILCRPPDLVGEPTPL-- 310
           G+D + D WSLGV+L+ ML G  PF+        +S  E   +I        GE      
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244

Query: 311 ---RNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
              ++LI+ LL  DP KR+ +  ++ +E+ + 
Sbjct: 245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  147 bits (374), Expect = 3e-41
 Identities = 72/345 (20%), Positives = 118/345 (34%), Gaps = 73/345 (21%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   LG+G  G VF    +      A+KVI R+ +   S     +D+      ++   +
Sbjct: 34  RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPL---SDSVTCPLEVALLWK 90

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           V     HP + RL     T +     ++   P +DL        +    +   R +  ++
Sbjct: 91  VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDL--FDYITEKGPLGEGPSRCFFGQV 148

Query: 138 VLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           V A+++ H+ G+V+RD+K ENI+I    G   L+DF     L                  
Sbjct: 149 VAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL------------------ 190

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                     + F                                    GT  Y  PE I
Sbjct: 191 -----HDEPYTDFD-----------------------------------GTRVYSPPEWI 210

Query: 257 EGKGHD-FAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCRPPDLVGEPTPLRNLI 314
               +       WSLG++L++M+ G  PF       E        P  +         LI
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHF---PAHV---SPDCCALI 264

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFE 359
           RR L   P+ R  +EEI    + +    ++ L  S+    P  + 
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLAWS 309

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  148 bits (375), Expect = 4e-41
 Identities = 78/328 (23%), Positives = 123/328 (37%), Gaps = 86/328 (26%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+  V        ++  FA+K+I       KSK        D    I   + +LR  
Sbjct: 30  IGVGSYSVCKRCIHKATNMEFAVKII------DKSKR-------DPTEEI---EILLRYG 73

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP +  L+ V    K+V    +   G +L  L K   ++ FS+         +   +EY
Sbjct: 74  QHPNIITLKDVYDDGKYVYVVTELMKGGEL--LDKILRQKFFSEREASAVLFTITKTVEY 131

Query: 144 LHNMGIVYRDLKPENIMIQENGH----IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           LH  G+V+RDLKP NI+  +       I + DF  + +L  +                  
Sbjct: 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN----------------- 174

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                 L   C                                    T  +VAPE++E +
Sbjct: 175 ----GLLMTPC-----------------------------------YTANFVAPEVLERQ 195

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCRPPDLVGEPTPL-----R 311
           G+D A D WSLGV+L+ ML G TPF      + +E   RI      L G          +
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255

Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           +L+ ++L  DP +R+    +  H +   
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIVH 283

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  148 bits (375), Expect = 4e-41
 Identities = 84/322 (26%), Positives = 133/322 (41%), Gaps = 82/322 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G+ G V L    ++ +  ALK I       +   L  +D   +  R   E   L+ +
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFI------SRQL-LKKSDMHMRVER---EISYLKLL 66

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            HP + +L  V++T   +   I+Y  G   D    +K+ +E     D  R +  +++ A+
Sbjct: 67  RHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTE-----DEGRRFFQQIICAI 121

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           EY H   IV+RDLKPEN+++ +N ++ + DF LS  ++                      
Sbjct: 122 EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-------------------- 161

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
             +FL   C S                P                    Y APE+I GK +
Sbjct: 162 --NFLKTSCGS----------------PN-------------------YAAPEVINGKLY 184

Query: 262 D-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC----RPPDLVGEPTPLRNLIRR 316
               VD WS G+VL+ ML G  PF        F ++       P  L       ++LIRR
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFL---SPGAQSLIRR 241

Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
           ++  DP +RI ++EI+   +F 
Sbjct: 242 MIVADPMQRITIQEIRRDPWFN 263

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  147 bits (373), Expect = 9e-41
 Identities = 59/359 (16%), Positives = 100/359 (27%), Gaps = 91/359 (25%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVI------WRDLIEKKSKEL--------TN 63
           L++V  L  G + VVFLV+DVE  E FALKV        R  +E+  +           +
Sbjct: 64  LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGES 123

Query: 64  NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDY-CPGRDLHSL-----R 117
            +     RR+      +     P   +L           Y +       DL  L      
Sbjct: 124 PEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDF 183

Query: 118 KQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK 177
                       +    A+L+     L + G+V+    P      +N   + +  D    
Sbjct: 184 VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTP------DN---LFIMPDGRLM 234

Query: 178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDS 237
                                       L          +                    
Sbjct: 235 ----------------------------LGDV---SALWKV------------------- 244

Query: 238 SEKSNSFVGTEEYVAPEIIEGKG--HDFAVDWWSLGVVLHEMLYGATPFRGSS--RKETF 293
             +  +      Y   E +         A++ W LG+ ++ +     PF   +   K ++
Sbjct: 245 GTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSW 304

Query: 294 YRILCRPPDLV--------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL 344
            R   R P             P  ++ LI R L  D  +R+   E      F  +  E+
Sbjct: 305 KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEI 363

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  149 bits (378), Expect = 2e-40
 Identities = 77/322 (23%), Positives = 129/322 (40%), Gaps = 81/322 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V + K   +    A+K++       + K + + D   K RR   E + L+  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKIL------NRQK-IRSLDVVGKIRR---EIQNLKLF 73

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            HP + +L  V+ST   +   ++Y  G +L  +  +  +      +   R    +++  +
Sbjct: 74  RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR----LDEKESRRLFQQILSGV 129

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           +Y H   +V+RDLKPEN+++  + +  + DF LS                      G   
Sbjct: 130 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS-----------------NMMSDG--- 169

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
              FL   C S                P                    Y APE+I G+ +
Sbjct: 170 --EFLRTSCGS----------------PN-------------------YAAPEVISGRLY 192

Query: 262 D-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC----RPPDLVGEPTPLRNLIRR 316
               VD WS GV+L+ +L G  PF        F +I       P  L      + +L++ 
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL---NPSVISLLKH 249

Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
           +L+ DP KR  +++I+ HE+FK
Sbjct: 250 MLQVDPMKRATIKDIREHEWFK 271

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  147 bits (372), Expect = 2e-40
 Identities = 66/325 (20%), Positives = 115/325 (35%), Gaps = 78/325 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V   ++  +    A K+I      K         + ++ +    E  V+  +
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKII------KTRGM----KDKEEVKN---EISVMNQL 143

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +H  L +L     +   +   ++Y  G +L   R        ++     +  ++   + +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIRH 202

Query: 144 LHNMGIVYRDLKPENIMIQ--ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           +H M I++ DLKPENI+    +   I ++DF                         G   
Sbjct: 203 MHQMYILHLDLKPENILCVNRDAKQIKIIDF-------------------------G--- 234

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
               L++       L+                            GT E++APE++     
Sbjct: 235 ----LARRYKPREKLKV-------------------------NFGTPEFLAPEVVNYDFV 265

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIRR 316
            F  D WS+GV+ + +L G +PF G +  ET   IL    DL  E         +  I +
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK 325

Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVN 341
           LL K+ + RI   E   H +     
Sbjct: 326 LLIKEKSWRISASEALKHPWLSDHK 350

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  150 bits (380), Expect = 2e-40
 Identities = 68/325 (20%), Positives = 111/325 (34%), Gaps = 78/325 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA GVV  V +  +  +FA K +                       +  E + +  +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFV------MTPH-------ESDKETVRKEIQTMSVL 211

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP L  L      D  +    ++  G +L   +        S+D    Y  ++   L +
Sbjct: 212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCKGLCH 270

Query: 144 LHNMGIVYRDLKPENIMIQ--ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           +H    V+ DLKPENIM     +  + L+DF                         G   
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDF-------------------------G--- 302

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
               L+                               +      GT E+ APE+ EGK  
Sbjct: 303 ----LTAHLDPK-------------------------QSVKVTTGTAEFAAPEVAEGKPV 333

Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIRR 316
            +  D WS+GV+ + +L G +PF G +  ET   +     ++            ++ IR+
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRK 393

Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVN 341
           LL  DP  R+ + +   H +    N
Sbjct: 394 LLLADPNTRMTIHQALEHPWLTPGN 418

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  145 bits (367), Expect = 5e-40
 Identities = 73/327 (22%), Positives = 124/327 (37%), Gaps = 83/327 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LGRGA  +V+  K   + + +ALKV+     +K   +          R    E  VL  +
Sbjct: 61  LGRGATSIVYRCKQKGTQKPYALKVL-----KKTVDK-------KIVRT---EIGVLLRL 105

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP + +L+ +  T   +   ++   G +L    +   +  +S+        +++ A+ Y
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGEL--FDRIVEKGYYSERDAADAVKQILEAVAY 163

Query: 144 LHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           LH  GIV+RDLKPEN++      +  + + DF                         G  
Sbjct: 164 LHENGIVHRDLKPENLLYATPAPDAPLKIADF-------------------------G-- 196

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                LSK     + ++                            GT  Y APEI+ G  
Sbjct: 197 -----LSKIVEHQVLMKT-------------------------VCGTPGYCAPEILRGCA 226

Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRG-SSRKETFYRILCRPPDLVGEPTPL-----RNLI 314
           +   VD WS+G++ + +L G  PF      +  F RIL      +           ++L+
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV 286

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           R+L+  DP KR+   +   H +  G  
Sbjct: 287 RKLIVLDPKKRLTTFQALQHPWVTGKA 313

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  144 bits (364), Expect = 7e-40
 Identities = 63/330 (19%), Positives = 110/330 (33%), Gaps = 81/330 (24%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++   LG G  G V+    V  +   A+K + +D I    +            R+  E  
Sbjct: 46  QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL-------PNGTRVPMEVV 98

Query: 79  VLRNVEHPLLP---RLRGVLSTDKFVGYAIDYC-PGRDLHSLRKQQSEQMFSDDTIRFYA 134
           +L+ V         RL             ++   P +DL             ++  R + 
Sbjct: 99  LLKKVSSGF-SGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFF 155

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
            +++ A+ + HN G+++RD+K ENI+I    G + L+DF     L               
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--------------- 200

Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP 253
                   + +  + F                                    GT  Y  P
Sbjct: 201 --------KDTVYTDFD-----------------------------------GTRVYSPP 217

Query: 254 EIIEGKGHD-FAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCRPPDLVGEPTPLR 311
           E I    +   +   WSLG++L++M+ G  PF                   +    +  +
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---RQRV---SSECQ 271

Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
           +LIR  L   P+ R   EEI+ H + + V 
Sbjct: 272 HLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  144 bits (364), Expect = 9e-40
 Identities = 76/367 (20%), Positives = 127/367 (34%), Gaps = 84/367 (22%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           LR+   L  G    V+  +DV S   +ALK +         +E        K R I  E 
Sbjct: 30  LRVRRVLAEGGFAFVYEAQDVGSGREYALKRL-----LSNEEE--------KNRAIIQEV 76

Query: 78  RVLRNV-EHPLLPRLRGVLSTDKFVGYA--------IDYCPGRDLHSLRKQQSEQMFSDD 128
             ++ +  HP + +     S  K              + C G+ +  L+K +S    S D
Sbjct: 77  CFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCD 136

Query: 129 TIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           T+     +   A++++H     I++RDLK EN+++   G I L DF  +T +S     + 
Sbjct: 137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW 196

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
                                                       S       E+  +   
Sbjct: 197 --------------------------------------------SAQRRALVEEEITRNT 212

Query: 247 TEEYVAPEIIE---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
           T  Y  PEII+           D W+LG +L+ + +   PF   +      RI+      
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA----KLRIVNGKYSI 268

Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEH 360
           P    + T   +LIR +L+ +P +R+ + E+           E+    +  P  P     
Sbjct: 269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL------QEIAAARNVNPKSPITELL 322

Query: 361 ENNESDG 367
           E N   G
Sbjct: 323 EQNGGYG 329

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  142 bits (361), Expect = 2e-38
 Identities = 73/356 (20%), Positives = 125/356 (35%), Gaps = 90/356 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA+G +   + +  +   A+K I  +      +E+                ++LR  
Sbjct: 32  LGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREV----------------QLLRES 74

Query: 84  -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
            EHP + R        +F   AI+ C    L     +Q +             +    L 
Sbjct: 75  DEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQE-YVEQKDFAHLGLEPITLLQQTTSGLA 132

Query: 143 YLHNMGIVYRDLKPENIMIQENGH-----IMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
           +LH++ IV+RDLKP NI+I           M+ DF L  KL+                  
Sbjct: 133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV----------------- 175

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
                                                  S  + +   GTE ++APE++ 
Sbjct: 176 ------------------------------------GRHSFSRRSGVPGTEGWIAPEMLS 199

Query: 258 G---KGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI----LCRPPDLVGEPTP 309
               +   + VD +S G V + ++  G+ PF  S +++    +    L        E   
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI 259

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNES 365
            R LI +++  DP KR   + +  H FF    W L  ++    ++  R E E+ + 
Sbjct: 260 ARELIEKMIAMDPQKRPSAKHVLKHPFF----WSLEKQLQFFQDVSDRIEKESLDG 311

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  140 bits (355), Expect = 2e-38
 Identities = 67/320 (20%), Positives = 109/320 (34%), Gaps = 76/320 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG+ G V  +KD ++    A+K +   L   + +EL                     +
Sbjct: 66  VGRGSFGEVHRMKDKQTGFQCAVKKV--RLEVFRVEELV----------------ACAGL 107

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
             P +  L G +    +V   ++   G  L  L KQ       +D   +Y  + +  LEY
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEY 165

Query: 144 LHNMGIVYRDLKPENIMIQENG-HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
           LH   I++ D+K +N+++  +G    L DF  +  L P                      
Sbjct: 166 LHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD--------------------- 204

Query: 203 RSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHD 262
                                             S    +   GTE ++APE++ GK  D
Sbjct: 205 ------------------------------GLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234

Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPLRNLIRRLL 318
             VD WS   ++  ML G  P+    R     +I   PP +   P          I+  L
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGL 294

Query: 319 EKDPTKRIGVEEIKGHEFFK 338
            K+P  R    E++      
Sbjct: 295 RKEPVHRASAMELRRKVGKA 314

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  139 bits (353), Expect = 4e-38
 Identities = 60/332 (18%), Positives = 115/332 (34%), Gaps = 91/332 (27%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V       + +  ALK++        S            + +    +     
Sbjct: 37  LGLGVNGKVLECFHRRTGQKCALKLL------YDSP--------KARQEVDHHWQASG-- 80

Query: 84  EHPLLPRLRGVLSTDKFVGYAI----DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
             P +  +  V          +    +   G +L S  +++ +Q F++        ++  
Sbjct: 81  -GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGT 139

Query: 140 ALEYLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           A+++LH+  I +RD+KPEN++     ++  + L DF                        
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF---------------------- 177

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                     +K  +   +L+ P                           T  YVAPE++
Sbjct: 178 ----------AKETTQN-ALQTPC-------------------------YTPYYVAPEVL 201

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDLVGEPTPL-- 310
             + +D + D WSLGV+++ +L G  PF  ++ +     +  R                 
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS 261

Query: 311 ---RNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
              + LIR LL+ DPT+R+ + +   H +   
Sbjct: 262 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  138 bits (349), Expect = 5e-38
 Identities = 45/325 (13%), Positives = 89/325 (27%), Gaps = 59/325 (18%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  +G G  G VF          +A+K            +     + D+   +     
Sbjct: 14  HELEKIGSGEFGSVFKCVKRLDGCIYAIKRS----------KKPLAGSVDEQNALREVYA 63

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIRFYAAE 136
                +H  + R     + D  +    +YC G  L        +    F +  ++    +
Sbjct: 64  HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           +   L Y+H+M +V+ D+KP NI I           +                       
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV------------ 171

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                    + K    G                                G   ++A E++
Sbjct: 172 ---------MFKIGDLGH--------------------VTRISSPQVEEGDSRFLANEVL 202

Query: 257 -EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPPDLVGE-PTPLRNL 313
            E   H    D ++L + +          R     + ++ I   R P +          L
Sbjct: 203 QENYTHLPKADIFALALTVVCAAGAEPLPRNG---DQWHEIRQGRLPRIPQVLSQEFTEL 259

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFK 338
           ++ ++  DP +R     +  H    
Sbjct: 260 LKVMIHPDPERRPSAMALVKHSVLL 284

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  138 bits (350), Expect = 4e-37
 Identities = 69/333 (20%), Positives = 119/333 (35%), Gaps = 92/333 (27%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V  + +  + E FALK++                      +   E  +    
Sbjct: 70  LGLGINGKVLQIFNKRTQEKFALKML------------------QDCPKARREVELHWRA 111

Query: 84  -EHPLLPRLRGV----LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
            + P + R+  V     +  K +   ++   G +L S  + + +Q F++         + 
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171

Query: 139 LALEYLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
            A++YLH++ I +RD+KPEN++      N  + L DF  +                    
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-------------------- 211

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                       K  +S  SL  P                           T  YVAPE+
Sbjct: 212 ------------KETTSHNSLTTPC-------------------------YTPYYVAPEV 234

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET----FYRILCRPPDLVGEPTPL- 310
           +  + +D + D WSLGV+++ +L G  PF  +           RI     +         
Sbjct: 235 LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 294

Query: 311 ----RNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
               + LIR LL+ +PT+R+ + E   H +   
Sbjct: 295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  138 bits (350), Expect = 6e-37
 Identities = 72/377 (19%), Positives = 129/377 (34%), Gaps = 109/377 (28%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR-N 82
           LG G+ G V   +        A+K +  D  +    E+                ++L  +
Sbjct: 23  LGYGSSGTVVF-QGSFQGRPVAVKRMLIDFCDIALMEI----------------KLLTES 65

Query: 83  VEHPLLPRLRGVLSTDKFVGYAIDYCPG--RDLHSLRKQQSEQM--FSDDTIRFYAAELV 138
            +HP + R     +TD+F+  A++ C    +DL   +    E +    +        ++ 
Sbjct: 66  DDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125

Query: 139 LALEYLHNMGIVYRDLKPENIMI-------------QENGHIMLVDFDLSTKLSPKTPQA 185
             + +LH++ I++RDLKP+NI++              EN  I++ DF L  KL       
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS----- 180

Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV 245
                                                            S      N+  
Sbjct: 181 -----------------------------------------------GQSSFRTNLNNPS 193

Query: 246 GTEEYVAPEIIEG-------KGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL 297
           GT  + APE++E        +    ++D +S+G V + +L  G  PF     +E+   I+
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NII 251

Query: 298 CRPPDLVGEPTPL--------RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
                L                +LI ++++ DP KR    ++  H  F    W    K+ 
Sbjct: 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF----WPKSKKLE 307

Query: 350 RPPNIPARFEHENNESD 366
               +  R E EN +  
Sbjct: 308 FLLKVSDRLEIENRDPP 324

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  135 bits (343), Expect = 9e-37
 Identities = 68/345 (19%), Positives = 122/345 (35%), Gaps = 93/345 (26%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA   V    ++ +S+ +A+K+I      +K           +  R   E  +L   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKII------EKQPG----HIRSRVFR---EVEMLYQC 67

Query: 84  E-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE 142
           + H  +  L      +       +   G  +  L      + F++        ++  AL+
Sbjct: 68  QGHRNVLELIEFFEEEDRFYLVFEKMRGGSI--LSHIHKRRHFNELEASVVVQDVASALD 125

Query: 143 YLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           +LHN GI +RDLKPENI+ +   +   + + DFDL + +                     
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI--------------------- 164

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG- 258
                                                S+ +  +  G+ EY+APE++E  
Sbjct: 165 ----------------------------KLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196

Query: 259 ----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET---------------FYRILCR 299
                 +D   D WSLGV+L+ +L G  PF G    +                F  I   
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256

Query: 300 PPDLVGEPTPL-----RNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
             +   +         ++LI +LL +D  +R+   ++  H + +G
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  132 bits (334), Expect = 6e-35
 Identities = 69/321 (21%), Positives = 117/321 (36%), Gaps = 74/321 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG GA GVV    +  +   F  K I                  DK   +  E  ++  +
Sbjct: 59  LGSGAFGVVHRCVEKATGRVFVAKFI------NTPYP------LDK-YTVKNEISIMNQL 105

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP L  L         +   +++  G +L   R    +   S+  +  Y  +    L++
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFD-RIAAEDYKMSEAEVINYMRQACEGLKH 164

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           +H   IV+ D+KP      EN  IM      S+                      +K   
Sbjct: 165 MHEHSIVHLDIKP------EN--IMCETKKASS----------------------VK--- 191

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
             +  F   G++        ++ PD          E       T E+ APEI++ +   F
Sbjct: 192 --IIDF---GLAT-------KLNPD----------EIVKVTTATAEFAAPEIVDREPVGF 229

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL-----RNLIRRLL 318
             D W++GV+ + +L G +PF G    ET   +     +   +         ++ I+ LL
Sbjct: 230 YTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLL 289

Query: 319 EKDPTKRIGVEEIKGHEFFKG 339
           +K+P KR+ V +   H + KG
Sbjct: 290 QKEPRKRLTVHDALEHPWLKG 310

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  120 bits (303), Expect = 2e-31
 Identities = 71/325 (21%), Positives = 131/325 (40%), Gaps = 81/325 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG+G  G+V+  +D+ +    A+K I      ++             + +  E  + +++
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEI-----PERDSR--------YSQPLHEEIALHKHL 76

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM-FSDDTIRFYAAELVLALE 142
           +H  + +  G  S + F+   ++  PG  L +L + +   +  ++ TI FY  +++  L+
Sbjct: 77  KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 136

Query: 143 YLHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           YLH+  IV+RD+K +N++I   +G + + DF  S +L+   P                  
Sbjct: 137 YLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-----------------C 179

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG--K 259
             +F                                        GT +Y+APEII+   +
Sbjct: 180 TETF---------------------------------------TGTLQYMAPEIIDKGPR 200

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILC--RPPDLVGEPTP-LRNL 313
           G+  A D WSLG  + EM  G  PF      E     +++      P++    +   +  
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 258

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFK 338
           I +  E DP KR    ++   EF K
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLK 283

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  115 bits (289), Expect = 2e-29
 Identities = 72/319 (22%), Positives = 125/319 (39%), Gaps = 76/319 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+GA G V+   DV + +  A++ +  +L ++  KEL           I  E  V+R  
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKEL-----------IINEILVMREN 74

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           ++P +            +   ++Y  G    SL    +E    +  I     E + ALE+
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALEF 131

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH+  +++RD+K +NI++  +G + L DF    +++P+                   KR 
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-----------------KRS 174

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
           +                                        VGT  ++APE++  K +  
Sbjct: 175 T---------------------------------------MVGTPYWMAPEVVTRKAYGP 195

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT----PLRNLIRRLLE 319
            VD WSLG++  EM+ G  P+   +     Y I       +  P       R+ + R LE
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE 255

Query: 320 KDPTKRIGVEEIKGHEFFK 338
            D  KR   +E+  H+F K
Sbjct: 256 MDVEKRGSAKELLQHQFLK 274

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  115 bits (290), Expect = 3e-29
 Identities = 70/319 (21%), Positives = 132/319 (41%), Gaps = 76/319 (23%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ G+V L ++  S    A+K++  DL +++ +EL  N           E  ++R+ 
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFN-----------EVVIMRDY 99

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +H  +  +       + +   +++  G    +L    S+   +++ I      ++ AL Y
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQG---GALTDIVSQVRLNEEQIATVCEAVLQALAY 156

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
           LH  G+++RD+K ++I++  +G + L DF    ++S   P                 KR+
Sbjct: 157 LHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-----------------KRK 199

Query: 204 SFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDF 263
           S                                        VGT  ++APE+I    +  
Sbjct: 200 S---------------------------------------LVGTPYWMAPEVISRSLYAT 220

Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT----PLRNLIRRLLE 319
            VD WSLG+++ EM+ G  P+   S  +   R+   PP  +         LR+ + R+L 
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV 280

Query: 320 KDPTKRIGVEEIKGHEFFK 338
           +DP +R   +E+  H F  
Sbjct: 281 RDPQERATAQELLDHPFLL 299

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  114 bits (288), Expect = 4e-29
 Identities = 70/322 (21%), Positives = 123/322 (38%), Gaps = 73/322 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  +G+G+ G VF   D  + +  A+K+I          +L   +  D+   I  E  
Sbjct: 25  TKLEKIGKGSFGEVFKGIDNRTQKVVAIKII----------DLEEAE--DEIEDIQQEIT 72

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           VL   + P + +  G    D  +   ++Y  G     L +        +  I     E++
Sbjct: 73  VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREIL 129

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             L+YLH+   ++RD+K  N+++ E+G + L DF ++ +L+         T +  NT   
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--------DTQIKRNT--- 178

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                                                        FVGT  ++APE+I+ 
Sbjct: 179 ---------------------------------------------FVGTPFWMAPEVIKQ 193

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPPDLVGEPTP-LRNLIRR 316
             +D   D WSLG+   E+  G  P       +  + I    PP L G  +  L+  +  
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 253

Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
            L K+P+ R   +E+  H+F  
Sbjct: 254 CLNKEPSFRPTAKELLKHKFIL 275

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  114 bits (287), Expect = 6e-29
 Identities = 69/358 (19%), Positives = 134/358 (37%), Gaps = 84/358 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            ++  LG G+ G V+     E+ +  A+K +    +E   +E+              E  
Sbjct: 32  DVLEKLGEGSYGSVYKAIHKETGQIVAIKQV---PVESDLQEIIK------------EIS 76

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPG---RDLHSLRKQQSEQMFSDDTIRFYAA 135
           +++  + P + +  G    +  +   ++YC      D+  LR +      ++D I     
Sbjct: 77  IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQ 132

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
             +  LEYLH M  ++RD+K  NI++   GH  L DF ++ +L+              +T
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT--------------DT 178

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
            +   KR +                                        +GT  ++APE+
Sbjct: 179 MA---KRNT---------------------------------------VIGTPFWMAPEV 196

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT----PLR 311
           I+  G++   D WSLG+   EM  G  P+         + I   PP    +P        
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFT 256

Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLK--ISRPPNIPARFEHENNESDG 367
           + +++ L K P +R    ++  H F +      +L+  I+   ++  + +      +G
Sbjct: 257 DFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLINEAMDVKLKRQESQQREEG 314

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  114 bits (288), Expect = 8e-29
 Identities = 76/341 (22%), Positives = 113/341 (33%), Gaps = 85/341 (24%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
              +S LG G  GVVF V    S    A K+I  ++                  +I  E 
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI------------KPAIRNQIIREL 82

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           +VL     P +    G   +D  +   +++  G  L  + K+       +  +   +  +
Sbjct: 83  QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAV 140

Query: 138 VLALEYLHNMG-IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           +  L YL     I++RD+KP NI++   G I                             
Sbjct: 141 IKGLTYLREKHKIMHRDVKPSNILVNSRGEI----------------------------- 171

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                      K C  G+S +                DS     +NSFVGT  Y++PE +
Sbjct: 172 -----------KLCDFGVSGQ--------------LIDS----MANSFVGTRSYMSPERL 202

Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRR 316
           +G  +    D WS+G+ L EM  G  P      KE      C+      E  P      R
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262

Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVNWELLLKI--SRPPNIP 355
            L K          I          +ELL  I    PP +P
Sbjct: 263 PLNKFGMDSRPPMAI----------FELLDYIVNEPPPKLP 293

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  112 bits (281), Expect = 3e-28
 Identities = 76/350 (21%), Positives = 127/350 (36%), Gaps = 88/350 (25%)

Query: 9   PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
            I   D+    +   +G GA  VV         E  A+K I  +L EK    +       
Sbjct: 11  SINRDDY---ELQEVIGSGATAVVQAAYCAPKKEKVAIKRI--NL-EKCQTSMDE----- 59

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRG--VLSTDKFVGYAIDYCPG---RDL---HSLRKQQ 120
               +  E + +    HP +       V+  + ++   +    G    D+      + + 
Sbjct: 60  ----LLKEIQAMSQCHHPNIVSYYTSFVVKDELWL--VMKLLSGGSVLDIIKHIVAKGEH 113

Query: 121 SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
              +  + TI     E++  LEYLH  G ++RD+K  NI++ E+G + + DF +S  L+ 
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLA- 172

Query: 181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK 240
                                                             +  D   ++ 
Sbjct: 173 --------------------------------------------------TGGDITRNKV 182

Query: 241 SNSFVGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-C 298
             +FVGT  ++APE++E  +G+DF  D WS G+   E+  GA P+      +     L  
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242

Query: 299 RPPDLVGEPT----------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
            PP L                 R +I   L+KDP KR    E+  H+FF+
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  111 bits (279), Expect = 5e-28
 Identities = 73/345 (21%), Positives = 122/345 (35%), Gaps = 92/345 (26%)

Query: 12  SLDFSC--LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           S++     L  +  LGRGA GVV  ++ V S +  A+K I            T N    +
Sbjct: 1   SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI----------RATVNS--QE 48

Query: 70  YRRISFEQRV-LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSD 127
            +R+  +  + +R V+ P      G L  +  V   ++          ++     Q   +
Sbjct: 49  QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPE 108

Query: 128 DTIRFYAAELVLALEYLH-NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           D +   A  +V ALE+LH  + +++RD+KP N++I   G +                   
Sbjct: 109 DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQV------------------- 149

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGIS--LEDPVHSPRIGPDPPSRSDSDSSEKSNSF 244
                                K C  GIS  L D                       +  
Sbjct: 150 ---------------------KMCDFGISGYLVD-------------------DVAKDID 169

Query: 245 VGTEEYVAPEIIEG----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR- 299
            G + Y+APE I      KG+    D WSLG+ + E+     P+       T ++ L + 
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW---GTPFQQLKQV 226

Query: 300 ----PPDLVGE--PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                P L  +       +   + L+K+  +R    E+  H FF 
Sbjct: 227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  110 bits (278), Expect = 7e-28
 Identities = 28/184 (15%), Positives = 64/184 (34%), Gaps = 33/184 (17%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           + +  +G G  G VF  K     +++ +K +     +  +++               E +
Sbjct: 14  KEIELIGSGGFGQVFKAKHRIDGKTYVIKRV-----KYNNEKAER------------EVK 56

Query: 79  VLRNVEHP----------------LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE 122
            L  ++H                          S  K +   +++C    L    +++  
Sbjct: 57  ALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 116

Query: 123 QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
           +            ++   ++Y+H+  ++ RDLKP NI + +   + + DF L T L    
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 176

Query: 183 PQAS 186
            +  
Sbjct: 177 KRTR 180

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 94.3 bits (235), Expect = 5e-22
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 5/104 (4%)

Query: 236 DSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
            +  K     GT  Y++PE I  + +   VD ++LG++L E+L+           + F  
Sbjct: 173 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA--FETSKFFTD 230

Query: 296 ILCRP-PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           +      D+       + L+++LL K P  R    EI       
Sbjct: 231 LRDGIISDIF--DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  110 bits (276), Expect = 1e-27
 Identities = 73/331 (22%), Positives = 127/331 (38%), Gaps = 79/331 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            IV  LG GA G V+  K+ E+    A KVI                + ++      E  
Sbjct: 22  EIVGELGDGAFGKVYKAKNKETGALAAAKVI-------------ETKSEEELEDYIVEIE 68

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L   +HP + +L G    D  +   I++CPG  + ++  +    + ++  I+    +++
Sbjct: 69  ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGL-TEPQIQVVCRQML 127

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            AL +LH+  I++RDLK  N+++   G I L DF +S K                 T   
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL--------------KTLQ- 172

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII-- 256
             KR                                       +SF+GT  ++APE++  
Sbjct: 173 --KR---------------------------------------DSFIGTPYWMAPEVVMC 191

Query: 257 ---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT----P 309
              +   +D+  D WSLG+ L EM     P    +      +I    P  +  P+     
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVE 251

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
            R+ ++  L+K+P  R    ++  H F   +
Sbjct: 252 FRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  107 bits (270), Expect = 1e-26
 Identities = 75/366 (20%), Positives = 134/366 (36%), Gaps = 103/366 (28%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           L  +  +G G  G V+ ++  ++    A+K +            + N   ++ +RI  + 
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQM----------RRSGNK--EENKRILMDL 74

Query: 78  RVL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
            V+ ++ + P + +  G   T+  V  A++   G     L+K+       +  +      
Sbjct: 75  DVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGP-IPERILGKMTVA 132

Query: 137 LVLALEYLH-NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
           +V AL YL    G+++RD+KP NI++ E G I                            
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLDERGQI---------------------------- 164

Query: 196 RSGIKKRRSFLSKFCSSGIS--LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP 253
                       K C  GIS  L D                    +  +   G   Y+AP
Sbjct: 165 ------------KLCDFGISGRLVD-------------------DKAKDRSAGCAAYMAP 193

Query: 254 EIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDL 303
           E I+        +D   D WSLG+ L E+  G  P++     +T + +L +     PP L
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC---KTDFEVLTKVLQEEPPLL 250

Query: 304 VGEPT---PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG--------VNW--ELLLKISR 350
            G        ++ ++  L KD  KR    ++  H F K          +W  +++ K   
Sbjct: 251 PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTES 310

Query: 351 PPNIPA 356
           P + P+
Sbjct: 311 PRSGPS 316

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  107 bits (268), Expect = 3e-26
 Identities = 75/370 (20%), Positives = 131/370 (35%), Gaps = 91/370 (24%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +V  +G G  G V+  + V++ +  A+KV+  D+   + +E+              E  
Sbjct: 27  ELVELVGNGTYGQVYKGRHVKTGQLAAIKVM--DVTGDEEEEIKQ------------EIN 72

Query: 79  VLRNV-EHPLLPRLRGVLSTDKFVGY------AIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
           +L+    H  +    G        G        +++C    +  L K        ++ I 
Sbjct: 73  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
           +   E++  L +LH   +++RD+K +N+++ EN  + LVDF +S +L         +TV 
Sbjct: 133 YICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD--------RTVG 184

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
             NT                                                F+GT  ++
Sbjct: 185 RRNT------------------------------------------------FIGTPYWM 196

Query: 252 APEII-----EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDLVG 305
           APE+I         +DF  D WSLG+   EM  GA P          + I     P L  
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS 256

Query: 306 EP--TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG------VNWELLLKISRPPNIPAR 357
           +      ++ I   L K+ ++R   E++  H F +       V  +L   I R       
Sbjct: 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKRGE 316

Query: 358 FEHENNESDG 367
            +    E  G
Sbjct: 317 KDETEYEYSG 326

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  106 bits (266), Expect = 3e-26
 Identities = 53/325 (16%), Positives = 114/325 (35%), Gaps = 81/325 (24%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +GRG+   V+   D E++   A   +     +    E          +R   E  +L+ +
Sbjct: 34  IGRGSFKTVYKGLDTETTVEVAWCEL--QDRKLTKSER---------QRFKEEAEMLKGL 82

Query: 84  EHP----LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           +HP            +   K +    +      L +  K+   ++     +R +  +++ 
Sbjct: 83  QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILK 140

Query: 140 ALEYLHNMG--IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
            L++LH     I++RDLK +NI I                                   +
Sbjct: 141 GLQFLHTRTPPIIHRDLKCDNIFI--------------------------------TGPT 168

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
           G  K    +     + +                       +  + + +GT E++APE+ E
Sbjct: 169 GSVK----IGDLGLATLK---------------------RASFAKAVIGTPEFMAPEMYE 203

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTP-LRNL 313
              +D +VD ++ G+ + EM     P+         YR +    +P        P ++ +
Sbjct: 204 E-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFK 338
           I   + ++  +R  ++++  H FF+
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQ 287

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  107 bits (269), Expect = 4e-26
 Identities = 69/376 (18%), Positives = 122/376 (32%), Gaps = 109/376 (28%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVI-----WRD--LIEKKSKELTNNDNGDKYR 71
            ++  +G G  G V L + +++ + +A+KV+     +     IE    +   ND+ +   
Sbjct: 38  LVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNN 97

Query: 72  RISFEQRVLRNVEHPLLPRLRG--VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
            +    +      +           L  +           G  L+ +  + +   F  + 
Sbjct: 98  IV----KYHGKFMY------YDHMCLIFEPL---------GPSLYEIITRNNYNGFHIED 138

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           I+ Y  E++ AL YL  M + + DLKPENI++ +      +          K      K 
Sbjct: 139 IKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK- 197

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                  +GIK     L  F  +                      +  S+   S + T +
Sbjct: 198 ------STGIK-----LIDFGCA----------------------TFKSDYHGSIINTRQ 224

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS--------------------- 288
           Y APE+I   G D + D WS G VL E+  G+  FR                        
Sbjct: 225 YRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLY 284

Query: 289 ----RKETFY----------------------RILCRPPDLVGEPTPLRNLIRRLLEKDP 322
                  + Y                         C P   + +     + +  +L+ DP
Sbjct: 285 EATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP 344

Query: 323 TKRIGVEEIKGHEFFK 338
           T R    E+  H+F +
Sbjct: 345 TLRPSPAELLKHKFLE 360

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  104 bits (262), Expect = 2e-25
 Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 20/170 (11%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G    VF V + E  + +A+K +  +  + ++ +         YR    E   L  +
Sbjct: 36  IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLD--------SYRN---EIAYLNKL 83

Query: 84  EHPLLP--RLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLA 140
           +       RL     TD+++ Y +  C   DL+S L+K++S         + Y   ++ A
Sbjct: 84  QQHSDKIIRLYDYEITDQYI-YMVMECGNIDLNSWLKKKKS---IDPWERKSYWKNMLEA 139

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           +  +H  GIV+ DLKP N +I  +G + L+DF ++ ++ P T      + 
Sbjct: 140 VHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 188

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 95.8 bits (239), Expect = 3e-22
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 19/123 (15%)

Query: 233 SDSDSSEKSNSFVGTEEYVAPEIIEGKG-----------HDFAVDWWSLGVVLHEMLYGA 281
               +S   +S VGT  Y+ PE I+                   D WSLG +L+ M YG 
Sbjct: 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

Query: 282 TPFRG-SSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHE 335
           TPF+   ++    + I+        PD+      L+++++  L++DP +RI + E+  H 
Sbjct: 237 TPFQQIINQISKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHP 294

Query: 336 FFK 338
           + +
Sbjct: 295 YVQ 297

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  105 bits (264), Expect = 2e-25
 Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 20/170 (11%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G    VF V + E  + +A+K +  +  + ++ +         YR    E   L  +
Sbjct: 17  IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLD--------SYRN---EIAYLNKL 64

Query: 84  EHPLLP--RLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLA 140
           +       RL     TD+++ Y +  C   DL+S L+K++S         + Y   ++ A
Sbjct: 65  QQHSDKIIRLYDYEITDQYI-YMVMECGNIDLNSWLKKKKS---IDPWERKSYWKNMLEA 120

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           +  +H  GIV+ DLKP N +I  +G + L+DF ++ ++ P T      + 
Sbjct: 121 VHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 169

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 93.2 bits (232), Expect = 3e-21
 Identities = 39/195 (20%), Positives = 76/195 (38%), Gaps = 26/195 (13%)

Query: 233 SDSDSSEKSNSFVGTEEYVAPEIIEGKG-----------HDFAVDWWSLGVVLHEMLYGA 281
               +S   +S VGT  Y+ PE I+                   D WSLG +L+ M YG 
Sbjct: 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

Query: 282 TPFRG-SSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHE 335
           TPF+   ++    + I+        PD+      L+++++  L++DP +RI + E+  H 
Sbjct: 218 TPFQQIINQISKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHP 275

Query: 336 FFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAGGGDAEQK 395
           + +       ++      +      E     G+         + K  + ++      E  
Sbjct: 276 YVQ-------IQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESH 328

Query: 396 NEVNDEMNKNRGGEK 410
           N  + +  + + G+K
Sbjct: 329 NSSSSKTFEKKRGKK 343

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  104 bits (260), Expect = 5e-25
 Identities = 71/328 (21%), Positives = 117/328 (35%), Gaps = 82/328 (25%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  +G G+ G V+  +DV +SE  A+K +            +   + +K++ I  E R
Sbjct: 57  SDLREIGHGSFGAVYFARDVRNSEVVAIKKM----------SYSGKQSNEKWQDIIKEVR 106

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPG--RDLHSLRKQQSEQMFSDDTIRFYAAE 136
            L+ + HP   + RG    +      ++YC G   DL  + K+       +  I      
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHG 162

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
            +  L YLH+  +++RD+K  NI++ E G + L DF  ++ ++                 
Sbjct: 163 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA----------------- 205

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
                  SF                                       VGT  ++APE+I
Sbjct: 206 ----PANSF---------------------------------------VGTPYWMAPEVI 222

Query: 257 ---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDLVGEP--TPL 310
              +   +D  VD WSLG+   E+     P    +     Y I     P L         
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF 282

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           RN +   L+K P  R   E +  H F  
Sbjct: 283 RNFVDSCLQKIPQDRPTSEVLLKHRFVL 310

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  103 bits (259), Expect = 1e-24
 Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 20/170 (11%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G    VF V + E  + +A+K +  +  + ++ +         YR    E   L  +
Sbjct: 64  IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLD--------SYRN---EIAYLNKL 111

Query: 84  EHPLLP--RLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFYAAELVLA 140
           +       RL     TD+++ Y +  C   DL+S L+K++S         + Y   ++ A
Sbjct: 112 QQHSDKIIRLYDYEITDQYI-YMVMECGNIDLNSWLKKKKS---IDPWERKSYWKNMLEA 167

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           +  +H  GIV+ DLKP N +I  +G + L+DF ++ ++ P T      + 
Sbjct: 168 VHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 93.0 bits (231), Expect = 6e-21
 Identities = 38/195 (19%), Positives = 75/195 (38%), Gaps = 26/195 (13%)

Query: 233 SDSDSSEKSNSFVGTEEYVAPEIIEGKG-----------HDFAVDWWSLGVVLHEMLYGA 281
               +S   +S VG   Y+ PE I+                   D WSLG +L+ M YG 
Sbjct: 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

Query: 282 TPFRG-SSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHE 335
           TPF+   ++    + I+        PD+      L+++++  L++DP +RI + E+  H 
Sbjct: 265 TPFQQIINQISKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHP 322

Query: 336 FFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAGGGDAEQK 395
           + +       ++      +      E     G+         + K  + ++      E  
Sbjct: 323 YVQ-------IQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESH 375

Query: 396 NEVNDEMNKNRGGEK 410
           N  + +  + + G+K
Sbjct: 376 NSSSSKTFEKKRGKK 390

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  101 bits (254), Expect = 5e-24
 Identities = 58/416 (13%), Positives = 126/416 (30%), Gaps = 115/416 (27%)

Query: 19  RIVSALGRGAK--GVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
            +++ +G+G +    V L +   + E   ++ I  +L            + +    +  E
Sbjct: 28  ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI--NL---------EACSNEMVTFLQGE 76

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
             V +   HP +   R     D  +     +        L         ++  I +    
Sbjct: 77  LHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 136

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           ++ AL+Y+H+MG V+R +K  +I+I  +G + L     +  +                  
Sbjct: 137 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI----------------- 179

Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII 256
           S  +++R                                   +     V    +++PE++
Sbjct: 180 SHGQRQRV--------------------------------VHDFPKYSVKVLPWLSPEVL 207

Query: 257 E--GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDLVGEPTP---- 309
           +   +G+D   D +S+G+   E+  G  PF+     +     L    P L+   T     
Sbjct: 208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 267

Query: 310 ------------------------------------------LRNLIRRLLEKDPTKRIG 327
                                                       + + + L+++P  R  
Sbjct: 268 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327

Query: 328 VEEIKGHEFFKGV----NWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVE 379
              +  H FFK +    +  L   +     I      ++ +  G     T   ++E
Sbjct: 328 ASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSGIFGLVTNLEELE 383

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  100 bits (250), Expect = 7e-24
 Identities = 74/330 (22%), Positives = 118/330 (35%), Gaps = 76/330 (23%)

Query: 8   RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE---KKSKELTNN 64
            P R    S L     LG+G  G                KV  R+  E    K     + 
Sbjct: 2   MPHRIFRPSDLIHGEVLGKGCFGQAI-------------KVTHRETGEVMVMKELIRFDE 48

Query: 65  DNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQ 123
           +    + +   E +V+R +EHP + +  GVL  DK +   I +Y  G  L  + K    Q
Sbjct: 49  ETQRTFLK---EVKVMRCLEHPNVLKFIGVLYKDKRL-NFITEYIKGGTLRGIIKSMDSQ 104

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
                 + F A ++   + YLH+M I++RDL   N +++EN ++++ DF L+  +  +  
Sbjct: 105 YPWSQRVSF-AKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163

Query: 184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS 243
           Q      L    R                                           K  +
Sbjct: 164 QPEGLRSLKKPDRK------------------------------------------KRYT 181

Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS--------RKETFYR 295
            VG   ++APE+I G+ +D  VD +S G+VL E++                      F  
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241

Query: 296 ILCRPPDLVGEPTPLRNLIRRLLEKDPTKR 325
               PP+    P     +  R  + DP KR
Sbjct: 242 -RYCPPNC---PPSFFPITVRCCDLDPEKR 267

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 99.6 bits (249), Expect = 2e-23
 Identities = 79/395 (20%), Positives = 137/395 (34%), Gaps = 118/395 (29%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVI--WRDLIEKKSKELTNNDNGDKYRRISFE 76
           ++ S LG GA GVV       + E  A+K I  +   +                 R   E
Sbjct: 14  QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL--------------RTLRE 59

Query: 77  QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCP----GRDLHSLRKQQSEQMFSDDTIRF 132
            ++L++ +H  +  +  +   D F  +   Y        DLH +   Q     SDD I++
Sbjct: 60  IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM---LSDDHIQY 116

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           +  + + A++ LH   +++RDLKP N++I  N  + + DF L+  +       S  T   
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT--- 173

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                    ++S + +                                   FV T  Y A
Sbjct: 174 --------GQQSGMVE-----------------------------------FVATRWYRA 190

Query: 253 PEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-- 309
           PE++     +  A+D WS G +L E+      F G   +     I      ++G P    
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF----GIIGTPHSDN 246

Query: 310 -------------LRN----------------------LIRRLLEKDPTKRIGVEEIKGH 334
                        +++                      L++R+L  DP KRI  +E   H
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306

Query: 335 EFFKG---VNWELLLKISRPPNIPARFEHENNESD 366
            + +     N E        P  P+ FE ++ +  
Sbjct: 307 PYLQTYHDPNDE----PEGEPIPPSFFEFDHYKEA 337

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 97.8 bits (244), Expect = 4e-23
 Identities = 64/364 (17%), Positives = 117/364 (32%), Gaps = 100/364 (27%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVK---DVESSESFALKVI-WRDLIEKKSKELTNNDNGDK 69
            F  L I   +G+G  G V+  +   +V      A+++I      E + K          
Sbjct: 31  PFEQLEIGELIGKGRFGQVYHGRWHGEV------AIRLIDIERDNEDQLKAFKR------ 78

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMFS 126
                 E    R   H  +    G          AI    C GR L+S +R    + +  
Sbjct: 79  ------EVMAYRQTRHENVVLFMGA-CMSPPH-LAIITSLCKGRTLYSVVRDA--KIVLD 128

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
            +  R  A E+V  + YLH  GI+++DLK +N+   +NG +++ DF L +          
Sbjct: 129 VNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFS---------- 177

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
                       I        +                              +K     G
Sbjct: 178 ------------ISGVLQAGRR-----------------------------EDKLRIQNG 196

Query: 247 TEEYVAPEII---------EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
              ++APEII         +        D ++LG + +E+     PF+    +   +++ 
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG 256

Query: 298 C--RPPDLVGE-PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI 354
              +P          + +++      +  +R    ++           E L K +R  + 
Sbjct: 257 TGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM-------LEKLPKRNRRLSH 309

Query: 355 PARF 358
           P  F
Sbjct: 310 PGHF 313

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 66/328 (20%), Positives = 112/328 (34%), Gaps = 78/328 (23%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDL---IEKKSKELTNNDNGDKY 70
           DF+ L +   +G G  G V+             +  W      + K ++   + D     
Sbjct: 5   DFAELTLEEIIGIGGFGKVY-------------RAFWIGDEVAV-KAARHDPDEDISQTI 50

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
             +  E ++   ++HP +  LRGV   +  +   +++  G  L+  L  ++       D 
Sbjct: 51  ENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR----IPPDI 106

Query: 130 IRFYAAELVLALEYLHNMG---IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
           +  +A ++   + YLH+     I++RDLK  NI         L+   +           S
Sbjct: 107 LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNI---------LILQKVEN------GDLS 151

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
            K +                 K    G++                R    +++ S    G
Sbjct: 152 NKIL-----------------KITDFGLA----------------REWHRTTKMSA--AG 176

Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDL 303
              ++APE+I         D WS GV+L E+L G  PFRG       Y +       P  
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236

Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
              P P   L+      DP  R     I
Sbjct: 237 STCPEPFAKLMEDCWNPDPHSRPSFTNI 264

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 97.0 bits (242), Expect = 2e-22
 Identities = 80/395 (20%), Positives = 131/395 (33%), Gaps = 117/395 (29%)

Query: 19  RIVSALGRGAKGVVFLVKD-VESSESFALKVI-----WRD--LIEKKS-KELTNNDNGDK 69
            IV  LG G  G V    D        ALK+I     +R+   +E    K++   D  +K
Sbjct: 22  EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENK 81

Query: 70  YRRISFEQRVLRNVEHPLLPRLRG--VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
           +  +     +             G   ++ +           G++     K+ + Q +  
Sbjct: 82  FLCV----LMSDWFNF------HGHMCIAFELL---------GKNTFEFLKENNFQPYPL 122

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
             +R  A +L  AL +LH   + + DLKPENI+   +      +F+          + S 
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNS------EFETLYNEHKSCEEKSV 176

Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT 247
           K        + I+     ++ F S+                      +   E   + V T
Sbjct: 177 K-------NTSIR-----VADFGSA----------------------TFDHEHHTTIVAT 202

Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPD-- 302
             Y  PE+I   G     D WS+G +L E   G T F+    +E    +   L   P   
Sbjct: 203 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHM 262

Query: 303 --------------------------LVGEPTPLRN--------------LIRRLLEKDP 322
                                     +     PL++              L+RR+LE DP
Sbjct: 263 IHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322

Query: 323 TKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPAR 357
            +RI + E   H FF G+  E   +       P+R
Sbjct: 323 AQRITLAEALLHPFFAGLTPE--ERSFHTSRNPSR 355

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 55/328 (16%), Positives = 109/328 (33%), Gaps = 96/328 (29%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVK----DVESSESFALKVI-WRDLIEKKSKELTNNDNGD 68
           DF  L  ++ L     G ++  +    D+       +KV+  RD   +KS++        
Sbjct: 8   DFKQLNFLTKLNENHSGELWKGRWQGNDI------VVKVLKVRDWSTRKSRDFNE----- 56

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMF 125
                  E   LR   HP +  + G   +       +   + P   L++ L +  +  + 
Sbjct: 57  -------ECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVD 109

Query: 126 SDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
               ++F A ++   + +LH +   I    L   ++         ++D D++ ++     
Sbjct: 110 QSQAVKF-ALDMARGMAFLHTLEPLIPRHALNSRSV---------MIDEDMTARI----- 154

Query: 184 QASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS 243
                                       + +                       S +S  
Sbjct: 155 --------------------------SMADVKF---------------------SFQSPG 167

Query: 244 FVGTEEYVAPEIIEGKGHDF---AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-- 298
            +    +VAPE ++ K  D    + D WS  V+L E++    PF   S  E   ++    
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG 227

Query: 299 -RPPDLVGEPTPLRNLIRRLLEKDPTKR 325
            RP    G    +  L++  + +DP KR
Sbjct: 228 LRPTIPPGISPHVSKLMKICMNEDPAKR 255

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 97.3 bits (242), Expect = 2e-22
 Identities = 63/387 (16%), Positives = 114/387 (29%), Gaps = 97/387 (25%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR-ISFEQ 77
            ++  LG G    V+L  D++  +  A+KV+                + + Y      E 
Sbjct: 40  HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV---------------KSAEHYTETALDEI 84

Query: 78  RVLR-----NVEHPLLPRLRGVLSTDKFVGYAID------YC----P-GRDLHSLRKQQS 121
           R+L+     +   P    +  +L  D F    I        C      G  L     + +
Sbjct: 85  RLLKSVRNSDPNDPNREMVVQLL--DDFK---ISGVNGTHICMVFEVLGHHLLKWIIKSN 139

Query: 122 EQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
            Q      ++    +++  L+YLH    I++ D+KPENI++  N   +            
Sbjct: 140 YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA-----EA 194

Query: 181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK 240
              Q S     + +  S                 + E      +I     +       + 
Sbjct: 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKL--KVKIADLGNACW---VHKH 249

Query: 241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF---------------- 284
               + T +Y + E++ G G++   D WS   +  E+  G   F                
Sbjct: 250 FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIA 309

Query: 285 ---------------RGSSRKETF-----------------YRILCRPPDLVG-EPTPLR 311
                           G   KE F                 + +L    +    E     
Sbjct: 310 LIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 369

Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           + +  +LE  P KR    E   H +  
Sbjct: 370 DFLLPMLELIPEKRATAAECLRHPWLN 396

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 96.2 bits (240), Expect = 2e-22
 Identities = 74/378 (19%), Positives = 125/378 (33%), Gaps = 115/378 (30%)

Query: 19  RIVSALGRGAKGVVFLVKDVES-SESFALKVI-----WRD--LIEKKS-KELTNNDNGDK 69
            IV  LG GA G V    D ++     A+K++     + +    E +  + L   D    
Sbjct: 17  EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNST 76

Query: 70  YRRISFEQRVLRNVEHPLLPRLRG--VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
           +R +    ++L   EH       G   +  +           G   +   K+     F  
Sbjct: 77  FRCV----QMLEWFEH------HGHICIVFELL---------GLSTYDFIKENGFLPFRL 117

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
           D IR  A ++  ++ +LH+  + + DLKPENI+  ++ +              +      
Sbjct: 118 DHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT-------------EAYNPKI 164

Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT 247
           K          IK     +  F S+                      +   E  ++ V T
Sbjct: 165 KRDERTLINPDIK-----VVDFGSA----------------------TYDDEHHSTLVST 197

Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS------------------- 288
             Y APE+I   G     D WS+G +L E   G T F                       
Sbjct: 198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHM 257

Query: 289 -----RKETFYRILCRPPD-------LVGEPTPLR--------------NLIRRLLEKDP 322
                +++ F+       +       +     PL+              +LI+++LE DP
Sbjct: 258 IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317

Query: 323 TKRIGVEEIKGHEFFKGV 340
            KRI + E   H FF  +
Sbjct: 318 AKRITLREALKHPFFDLL 335

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 96.0 bits (239), Expect = 7e-22
 Identities = 74/407 (18%), Positives = 123/407 (30%), Gaps = 153/407 (37%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVI-----WRD--LIEKKS-KELTNNDNGDKY 70
            ++  +G+G+ G V    D +  +  ALK++     +      E +  + L   D  +  
Sbjct: 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159

Query: 71  RRISFEQRVLRNVEHPLLPRLRG--VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
             I     +L N         R    ++ +             +L+ L K+   Q FS  
Sbjct: 160 NVI----HMLENFTF------RNHICMTFELL---------SMNLYELIKKNKFQGFSLP 200

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
            +R +A  ++  L+ LH   I++ DLKPENI++++ G                       
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG----------------------- 237

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                  RSGIK     +  F SS    E       I     SR                
Sbjct: 238 -------RSGIK-----VIDFGSS--CYEHQRVYTYI----QSRF--------------- 264

Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS-------------------- 288
            Y APE+I G  +   +D WSLG +L E+L G     G                      
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323

Query: 289 ----RKETFYRILCRPPDLVGEPTP----------------------------------- 309
               R + F      P                                            
Sbjct: 324 DASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383

Query: 310 -LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIP 355
              + +++ LE DP  R+   +   H + +        ++ +PP   
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLRR-------RLPKPPTGE 423

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 93.9 bits (234), Expect = 7e-22
 Identities = 61/328 (18%), Positives = 112/328 (34%), Gaps = 92/328 (28%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVK---DVESSESFALKVI-WRDLIEKKSKELTNNDNGDK 69
               + +   +G G+ G V+  K   DV      A+K++       ++ +   N      
Sbjct: 22  PDGQITVGQRIGSGSFGTVYKGKWHGDV------AVKMLNVTAPTPQQLQAFKN------ 69

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHSLRKQQSEQMFSD 127
                 E  VLR   H  +    G  +  +    AI   +C G  L+        +    
Sbjct: 70  ------EVGVLRKTRHVNILLFMGYSTAPQL---AIVTQWCEGSSLYHHLHASETKFEMK 120

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
             I   A +    ++YLH   I++RDLK  NI + E+  + + DF L             
Sbjct: 121 KLIDI-ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGL------------- 166

Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT 247
                    +  K R S                                 S +     G+
Sbjct: 167 ---------ATEKSRWS--------------------------------GSHQFEQLSGS 185

Query: 248 EEYVAPEIIEGKGH---DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP 301
             ++APE+I  +      F  D ++ G+VL+E++ G  P+   + ++    ++      P
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP 245

Query: 302 DLVGEPT----PLRNLIRRLLEKDPTKR 325
           DL    +     ++ L+   L+K   +R
Sbjct: 246 DLSKVRSNCPKRMKRLMAECLKKKRDER 273

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 95.2 bits (237), Expect = 1e-21
 Identities = 76/390 (19%), Positives = 139/390 (35%), Gaps = 118/390 (30%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISF 75
            I   +GRG+ G V+L  D  + ++ A+K + R   DLI+ K              RI  
Sbjct: 29  IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCK--------------RILR 74

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYC----PGRDLHSLRKQQSEQMFSDDTIR 131
           E  +L  ++   + RL  ++  D  + +   Y        DL  L K  +    +++ I+
Sbjct: 75  EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK--TPIFLTEEHIK 132

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
                L+L   ++H  GI++RDLKP N ++ ++  + + DF L+                
Sbjct: 133 TILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA---------------- 176

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                      R+  S+  ++ ++  +    P        +  +         V T  Y 
Sbjct: 177 -----------RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTS-------HVVTRWYR 218

Query: 252 APEIIEG-KGHDFAVDWWSLGVVLHEMLYGATP-----------FRGSSRKETFYRILCR 299
           APE+I   + +  ++D WS G +  E+L                F GSS          +
Sbjct: 219 APELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSK 278

Query: 300 PP-------------DLVGEPT-------------------------PLR---------- 311
                          +++G PT                          L+          
Sbjct: 279 KVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338

Query: 312 -NLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
            NL+  +L+ +P KRI +++   H + K V
Sbjct: 339 INLLESMLKFNPNKRITIDQALDHPYLKDV 368

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 92.0 bits (229), Expect = 3e-21
 Identities = 62/330 (18%), Positives = 118/330 (35%), Gaps = 76/330 (23%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           L  + +     +G+G  G+V   + V+     A+K +               +  +K++ 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL------ILGDSEGETEMIEKFQE 69

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHSLRKQQSEQMFSDDTI 130
              E  ++ N+ HP + +L G+   +      +  ++ P  DL+     ++  +     +
Sbjct: 70  FQREVFIMSNLNHPNIVKLYGL-MHN---PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125

Query: 131 RFYAAELVLALEYLHNMG--IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
           R    ++ L +EY+ N    IV+RDL+  N        I L   D +  +  K       
Sbjct: 126 RL-MLDIALGIEYMQNQNPPIVHRDLRSPN--------IFLQSLDENAPVCAK------- 169

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                            ++ F   G+S                +    S    +  +G  
Sbjct: 170 -----------------VADF---GLS----------------QQSVHSV---SGLLGNF 190

Query: 249 EYVAPEIIEGKG--HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPP 301
           +++APE I  +   +    D +S  ++L+ +L G  PF   S  +  +  +      RP 
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT 250

Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
                P  LRN+I      DP KR     I
Sbjct: 251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 92.4 bits (230), Expect = 1e-20
 Identities = 75/382 (19%), Positives = 126/382 (32%), Gaps = 120/382 (31%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +V  LG+GA G+V+   D  + E  A+K I                  D ++  +  QR
Sbjct: 12  ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-----------------FDAFQNSTDAQR 54

Query: 79  VLRNV-------EHPLLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
             R +        H  +  L  VL  D     Y +      DLH++ +            
Sbjct: 55  TFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANI---LEPVHK 111

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           ++   +L+  ++YLH+ G+++RD+KP NI++    H+ + DF LS          +   +
Sbjct: 112 QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPL 171

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
                       +  L+                                    +V T  Y
Sbjct: 172 SINENTENFDDDQPILTD-----------------------------------YVATRWY 196

Query: 251 VAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP 309
            APEI+ G   +   +D WSLG +L E+L G   F GSS      RI+     ++  P+ 
Sbjct: 197 RAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII----GVIDFPSN 252

Query: 310 --------------LRNL--------------------------------------IRRL 317
                         + +L                                      + +L
Sbjct: 253 EDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKL 312

Query: 318 LEKDPTKRIGVEEIKGHEFFKG 339
           L+ +P KRI   +   H F   
Sbjct: 313 LQFNPNKRISANDALKHPFVSI 334

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 93.0 bits (231), Expect = 1e-20
 Identities = 73/398 (18%), Positives = 126/398 (31%), Gaps = 126/398 (31%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISF 75
            I   +G G+ G V    D       A+K I R   DLI+ K              RI  
Sbjct: 56  EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCK--------------RILR 101

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCP----GRDLHSLRKQQSEQMFSDDTIR 131
           E  +L  + H  + ++  ++       +   Y        D   L +  +    ++  I+
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR--TPVYLTELHIK 159

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
                L++ ++Y+H+ GI++RDLKP N ++ ++  + + DF L+                
Sbjct: 160 TLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA---------------- 203

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE-- 249
                      R+                  P    +      +    K+     T    
Sbjct: 204 -----------RTV-------DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV 245

Query: 250 ---YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATP-----------FRGSSRKETFY 294
              Y APE+I   + +  A+D WS+G +  E+L                F GSS      
Sbjct: 246 TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSP 305

Query: 295 RILCRPP----------------DLVGEPT-------------------------PLR-- 311
                                  +++G P+                          L   
Sbjct: 306 DQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365

Query: 312 ---------NLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
                    +L++R+L  +P KRI + E   H FFK V
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 87.7 bits (218), Expect = 2e-19
 Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 25/159 (15%)

Query: 20  IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           +V  LGRG    VF   ++ ++E   +K++                   K +R   E ++
Sbjct: 40  LVRKLGRGKYSEVFEAINITNNEKVVVKIL-------------KPVKKKKIKR---EIKI 83

Query: 80  LRNV-EHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAE 136
           L N+   P +  L  ++     +      ++    D   L      Q  +D  IRFY  E
Sbjct: 84  LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYE 138

Query: 137 LVLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVDFDL 174
           ++ AL+Y H+MGI++RD+KP N+MI  E+  + L+D+ L
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 40/139 (28%)

Query: 242 NSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI--- 296
           N  V +  +  PE++   + +D+++D WSLG +L  M++   P F G    +   RI   
Sbjct: 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 247

Query: 297 --------------LCRPPDLVG-----EPTPLRNLIRR------------LLEK----D 321
                         +   P                 +               L+K    D
Sbjct: 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 307

Query: 322 PTKRIGVEEIKGHEFFKGV 340
              R+   E   H +F  V
Sbjct: 308 HQSRLTAREAMEHPYFYTV 326

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 86.2 bits (214), Expect = 6e-19
 Identities = 60/315 (19%), Positives = 107/315 (33%), Gaps = 79/315 (25%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   +GRG  G V+  +D       ALK++   L          + +     R+  E R
Sbjct: 37  RLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETL----------SSDPVFRTRMQREAR 86

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
               ++ P +  +      D  +   +    G DL ++ ++Q   +     +     ++ 
Sbjct: 87  TAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVA-IVRQIG 144

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            AL+  H  G  +RD+KPEN        I++                         +   
Sbjct: 145 SALDAAHAAGATHRDVKPEN--------ILV-------------------------SADD 171

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE-KSNSFVGTEEYVAPEIIE 257
                  L  F   GI+                 + +D    +  + VGT  Y+APE   
Sbjct: 172 FAY----LVDF---GIA----------------SATTDEKLTQLGNTVGTLYYMAPERFS 208

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-------KETFYRILCRPPDLVGEPTPL 310
                +  D ++L  VL+E L G+ P++G           +   R     P +   P   
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGI---PVAF 265

Query: 311 RNLIRRLLEKDPTKR 325
             +I R + K+P  R
Sbjct: 266 DAVIARGMAKNPEDR 280

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 86.7 bits (215), Expect = 6e-19
 Identities = 63/403 (15%), Positives = 120/403 (29%), Gaps = 136/403 (33%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS-FEQ 77
            +V  LG G    V+L KD+ ++   A+K++                    Y   +  E 
Sbjct: 22  ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV---------------RGDKVYTEAAEDEI 66

Query: 78  RVLRNV--------EHPLLPRLRGVLSTDKFVGYAIDYCP------GRDLHSLRKQQSEQ 123
           ++L+ V        +      +  +L      G    +        G +L +L K+   +
Sbjct: 67  KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR 126

Query: 124 MFSDDTIRFYAAELVLALEYLH-NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
                 ++  + +L+L L+Y+H   GI++ D+KPEN        +++   D         
Sbjct: 127 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN--------VLMEIVDSPEN----- 173

Query: 183 PQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN 242
                           IK     ++   ++                          E   
Sbjct: 174 -------------LIQIK-----IADLGNA----------------------CWYDEHYT 193

Query: 243 SFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY-------- 294
           + + T EY +PE++ G       D WS   ++ E++ G   F                  
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253

Query: 295 -RILCRPP--------------DLVGE--------PTPLRN------------------L 313
             +L   P              +  G           PL +                   
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPA 356
           +  +L+ DP KR     +  H + K     L ++  R P+   
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLKD---TLGMEEIRVPDREL 353

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 86.3 bits (214), Expect = 9e-19
 Identities = 67/333 (20%), Positives = 122/333 (36%), Gaps = 107/333 (32%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVI-----WRD--LIEKKS-KELTNNDNGDKY 70
            I S +G+G+ G V    D    E  A+K+I     + +   IE +  + +  +D   KY
Sbjct: 57  EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY 116

Query: 71  RRISFEQRVLRNVEHPLLPRLRG--VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
             +     + R+         R    L  +             +L+ L +  + +  S +
Sbjct: 117 YIV----HLKRHFMF------RNHLCLVFEML---------SYNLYDLLRNTNFRGVSLN 157

Query: 129 TIRFYAAELVLALEYLHN--MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
             R +A ++  AL +L    + I++ DLKPENI++                         
Sbjct: 158 LTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPK--------------------- 196

Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG 246
                    RS IK     +  F SS                          ++   ++ 
Sbjct: 197 ---------RSAIK-----IVDFGSS----------------------CQLGQRIYQYIQ 220

Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
           +  Y +PE++ G  +D A+D WSLG +L EM  G   F G++  +   +I+    +++G 
Sbjct: 221 SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV----EVLGI 276

Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
           P         +L++ P         K  +FF+ 
Sbjct: 277 PP------AHILDQAP---------KARKFFEK 294

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 69/320 (21%), Positives = 121/320 (37%), Gaps = 87/320 (27%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +IV  LG G    V+L +D   +   A+K I+              +  +  +R   E  
Sbjct: 14  KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP----------REKEETLKRFEREVH 63

Query: 79  VLRNVEHPLLPRLRGVLS-----TDKFVGY-AIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
               + H        ++S      +    Y  ++Y  G  L    +     +  D  I F
Sbjct: 64  NSSQLSHQ------NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINF 116

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
              +++  +++ H+M IV+RD+KP+N        I++                       
Sbjct: 117 -TNQILDGIKHAHDMRIVHRDIKPQN--------ILI----------------------- 144

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE-KSNSFVGTEEYV 251
               +   K   F       GI+                ++ S++S  ++N  +GT +Y 
Sbjct: 145 --DSNKTLKIFDF-------GIA----------------KALSETSLTQTNHVLGTVQYF 179

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR-ILCRPPDLVGE---- 306
           +PE  +G+  D   D +S+G+VL+EML G  PF G +      + I    P++  +    
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKD 239

Query: 307 -PTPLRNLIRRLLEKDPTKR 325
            P  L N+I R  EKD   R
Sbjct: 240 IPQSLSNVILRATEKDKANR 259

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 83.9 bits (208), Expect = 4e-18
 Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 16/166 (9%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           L+ +  +GRGA G V  +    S +  A+K I            T ++   + +++  + 
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI----------RSTVDE--KEQKQLLMDL 71

Query: 78  RV-LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPG--RDLHSLRKQQSEQMFSDDTIRFYA 134
            V +R+ + P + +  G L  +      ++         +       + +  ++ +    
Sbjct: 72  DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131

Query: 135 AELVLALEYLH-NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
              V AL +L  N+ I++RD+KP NI++  +G+I L DF +S +L 
Sbjct: 132 LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 65.0 bits (159), Expect = 9e-12
 Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 28/151 (18%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEG----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK 290
            DS  K+    G   Y+APE I+     +G+D   D WSLG+ L+E+  G  P+      
Sbjct: 177 VDSIAKTR-DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW--- 232

Query: 291 ETFYRILCR-----PPDLVGEPT-----PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
            + +  L +     PP L             N +   L KD +KR   +E+  H F    
Sbjct: 233 NSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292

Query: 341 N--------W--ELLLKISRPPNIPARFEHE 361
                    +  ++L ++   P+ P   +H 
Sbjct: 293 EERAVEVACYVCKILDQMPATPSSPMYVDHH 323

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 52/227 (22%), Positives = 80/227 (35%), Gaps = 66/227 (29%)

Query: 107 YCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH 166
           Y  G  L  +   +   M     I    A+   AL + H  GI++RD+KP N        
Sbjct: 97  YVDGVTLRDIVHTEG-PMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPAN-------- 146

Query: 167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIG 226
           IM+                         + +   K   F       GI+           
Sbjct: 147 IMI-------------------------SATNAVKVMDF-------GIA----------- 163

Query: 227 PDPPSRSDSDSSE---KSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP 283
                R+ +DS     ++ + +GT +Y++PE   G   D   D +SLG VL+E+L G  P
Sbjct: 164 -----RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218

Query: 284 FRGSSRKETFYR----ILCRPPDLVGE-PTPLRNLIRRLLEKDPTKR 325
           F G S     Y+        P          L  ++ + L K+P  R
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 78.6 bits (194), Expect = 5e-16
 Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 27/174 (15%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
                +G G+ GVV+  K  +S E  A+K +   L +K+           K R    E +
Sbjct: 57  TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKR----------FKNR----ELQ 99

Query: 79  VLRNVEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTI 130
           ++R ++H  + RLR    +      + ++   +DY P   ++ + +   +++Q      +
Sbjct: 100 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYV 158

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTP 183
           + Y  +L  +L Y+H+ GI +RD+KP+N+++  +  ++ L DF  + +L    P
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 45/167 (26%), Positives = 60/167 (35%), Gaps = 46/167 (27%)

Query: 236 DSSEKSNSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
              E + S++ +  Y APE+I G   +  ++D WS G VL E+L G   F G S  +   
Sbjct: 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267

Query: 295 RILCRPPDLVGEPT----------------------PLR------------NLIRRLLEK 320
            I+     ++G PT                      P               L  RLLE 
Sbjct: 268 EII----KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323

Query: 321 DPTKRIGVEEIKGHEFFKGVNWELLLKISRPPN---IPARFEHENNE 364
            PT R+   E   H FF     EL     + PN    PA F     E
Sbjct: 324 TPTARLTPLEACAHSFFD----ELRDPNVKLPNGRDTPALFNFTTQE 366

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 79.1 bits (195), Expect = 5e-16
 Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 23/160 (14%)

Query: 19  RIVSALGRGAKGVVFLVKDVE-SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
            +   +  G  G ++L  D   +     LK             L ++ + +       E+
Sbjct: 83  EVKGCIAHGGLGWIYLALDRNVNGRPVVLKG------------LVHSGDAEAQAMAMAER 130

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAI-----DYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           + L  V HP + ++   +      G  +     +Y  G+ L   +    +++   + I  
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---QKLPVAEAIA- 186

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
           Y  E++ AL YLH++G+VY DLKPENIM+ E   + L+D 
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ-LKLIDL 225

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 76.0 bits (187), Expect = 6e-15
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP 300
                GT  + APEI+   G   A D +++G  L  +        G          L   
Sbjct: 234 FGYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLDLPTRNGRYVDG-----LPED 287

Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKR 325
             ++        L+RR ++ DP +R
Sbjct: 288 DPVLKTYDSYGRLLRRAIDPDPRQR 312

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 76.0 bits (188), Expect = 1e-15
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 18/155 (11%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQRVL 80
           +G G  GVV+  ++  + E  ALK I           L     G      R IS    +L
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKI----------RLDTETEGVPSTAIREIS----LL 56

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + + HP + +L  V+ T+  +    ++   +DL       +        I+ Y  +L+  
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQG 115

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           L + H+  +++RDLKP+N++I   G I L DF L+
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 76.1 bits (188), Expect = 1e-15
 Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 13/151 (8%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVVF  ++ ++ +  A+K              + +D   K   +  E R+L+ +
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKF----------LESEDDPVIKKIALR-EIRMLKQL 59

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           +HP L  L  V    + +    +YC    +     +   +   +  ++    + + A+ +
Sbjct: 60  KHPNLVNLLEVFRRKRRLHLVFEYCD-HTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNF 117

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
            H    ++RD+KPENI+I ++  I L DF  
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGF 148

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 35/145 (24%)

Query: 250 YVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------------ 296
           Y +PE++ G       VD W++G V  E+L G   + G S  +  Y I            
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQ 227

Query: 297 --LCRPPDLVG-------EPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEF 336
                     G       +  PL             L++  L  DPT+R+  E++  H +
Sbjct: 228 QVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287

Query: 337 FKGVNWELLLKISRPPNIPARFEHE 361
           F+ +    +  +++  + PA   + 
Sbjct: 288 FENIR--EIEDLAKEHDKPAENLYF 310

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 76.7 bits (189), Expect = 1e-15
 Identities = 34/175 (19%), Positives = 71/175 (40%), Gaps = 25/175 (14%)

Query: 19  RIVSALGRGAKGVVFLVKDVESS--------ESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           ++ S   R  +G+++      +         + F+LK      ++ K   L N  N   +
Sbjct: 45  KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK------LDAKDGRLFNEQN--FF 96

Query: 71  RRISFEQRV-----LRNVEHPLLPRLRGV-LSTDKFVGYAIDYCPGRDLHSLRKQQSEQM 124
           +R +   +V     L +     +P   G  +  DK+    +    GR L S      + +
Sbjct: 97  QRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHV 155

Query: 125 FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTK 177
            S+ ++   A  L+ ALE+LH    V+ ++  ENI +  ++   + L  +  + +
Sbjct: 156 LSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFR 210

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 26/159 (16%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-RN 82
           LG G  G V  + +  + E FALK++                      +   E  +  R 
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKML------------------QDCPKARREVELHWRA 67

Query: 83  VEHPLLPRLRGV----LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
            + P + R+  V     +  K +   ++   G +L S  + + +Q F++         + 
Sbjct: 68  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127

Query: 139 LALEYLHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDL 174
            A++YLH++ I +RD+KPEN++      N  + L DF  
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET----FYRILCRPPDLVGEP 307
           A E   G+ +D + D WSLGV+++ +L G  PF  +           RI     +     
Sbjct: 167 AKETT-GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 225

Query: 308 TPL-----RNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
                   + LIR LL+ +PT+R+ + E   H +   
Sbjct: 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 74.9 bits (185), Expect = 3e-15
 Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 23/162 (14%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY------RRISFEQ 77
           +G GA G V+  +D  S    ALK +           + N   G         R ++  +
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSV----------RVPNGGGGGGGLPISTVREVALLR 66

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAI-----DYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           R L   EHP + RL  V +T +           ++   +DL +   +        +TI+ 
Sbjct: 67  R-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKD 124

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
              + +  L++LH   IV+RDLKPENI++   G + L DF L
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 28/117 (23%)

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPD----- 302
           Y APE++    +   VD WS+G +  EM      F G+S  +   +I  L   P      
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244

Query: 303 ----------LVGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                         P P++            L+  +L  +P KRI       H +  
Sbjct: 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 74.3 bits (183), Expect = 4e-15
 Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 32/183 (17%)

Query: 1   MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
            N+VV             ++   +G G+ GV+F   ++ +++  A+K       E +   
Sbjct: 4   QNNVVGVH---------YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK------FEPRR-- 46

Query: 61  LTNNDNGDKYRRISFEQRVLRNVEH-PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQ 119
                      ++  E R  + +     +P +             ID   G  L  L   
Sbjct: 47  -------SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDL 98

Query: 120 QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI----QENGH-IMLVDFDL 174
              + FS  T+   A +++  ++ +H   +VYRD+KP+N +I     +N + I +VDF +
Sbjct: 99  CG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157

Query: 175 STK 177
              
Sbjct: 158 VKF 160

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 73.6 bits (181), Expect = 9e-15
 Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 21/163 (12%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   +G G+ G ++L  D+ + E  A+K      +E             K+ ++  E +
Sbjct: 12  RLGRKIGSGSFGDIYLGTDIAAGEEVAIK------LECVK---------TKHPQLHIESK 56

Query: 79  VLRNVEH-PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           + + ++    +P +R   +   +    ++   G  L  L    S + FS  T+   A ++
Sbjct: 57  IYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQM 114

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGH---IMLVDFDLSTK 177
           +  +EY+H+   ++RD+KP+N ++        + ++DF L+ K
Sbjct: 115 ISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 28/169 (16%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G+ GVVF  K VES E  A+K +   L +K+           K R +     ++R V
Sbjct: 48  IGNGSFGVVFQAKLVESDE-VAIKKV---LQDKR----------FKNRELQ----IMRIV 89

Query: 84  EHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAA 135
           +HP +  L+    +      + F+   ++Y P   ++   +   + +Q      I+ Y  
Sbjct: 90  KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP-ETVYRASRHYAKLKQTMPMLLIKLYMY 148

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTP 183
           +L+ +L Y+H++GI +RD+KP+N+++     ++ L+DF  +  L    P
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP 197

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 42/169 (24%), Positives = 63/169 (37%), Gaps = 46/169 (27%)

Query: 236 DSSEKSNSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
            + E + S++ +  Y APE+I G   +   +D WS G V+ E++ G   F G S  +   
Sbjct: 193 IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252

Query: 295 RILCRPPDLVGEPT----------------------PLR------------NLIRRLLEK 320
            I+     ++G P+                      P              +LI RLLE 
Sbjct: 253 EII----KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY 308

Query: 321 DPTKRIGVEEIKGHEFFKGVNWELLLKISRPPN---IPARFEHENNESD 366
            P+ R+   E   H FF     EL    +R PN   +P  F     E  
Sbjct: 309 TPSARLTAIEALCHPFFD----ELRTGEARMPNGRELPPLFNWTKEELS 353

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 27/177 (15%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++    G+G  G V L K+  +  S A+K + +D   +              R +    +
Sbjct: 26  QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN-------------RELQ-IMQ 71

Query: 79  VLRNVEHPLLPRLRGVLST-------DKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDT 129
            L  + HP + +L+    T       D ++   ++Y P   LH   +   + +       
Sbjct: 72  DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPIL 130

Query: 130 IRFYAAELVLALEYLHN--MGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSPKTP 183
           I+ +  +L+ ++  LH   + + +RD+KP N+++ + +G + L DF  + KLSP  P
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP 187

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 50/183 (27%)

Query: 236 DSSEKSNSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
             SE + +++ +  Y APE+I G + +  AVD WS+G +  EM+ G   FRG +     +
Sbjct: 183 SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH 242

Query: 295 RILCRPPDLVGEPT----------------------PLRN---------------LIRRL 317
            I+     ++G P+                      P  N               L+  L
Sbjct: 243 EIV----RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSAL 298

Query: 318 LEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI----PARFEHENNESDGRGRDGT 373
           L+  P +R+   E   H +F     EL    ++ PN        F    NE +       
Sbjct: 299 LQYLPEERMKPYEALCHPYFD----ELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQK 354

Query: 374 KEI 376
            ++
Sbjct: 355 AKL 357

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 73.0 bits (180), Expect = 2e-14
 Identities = 30/155 (19%), Positives = 65/155 (41%), Gaps = 19/155 (12%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY---RRISFEQRVL 80
           +G G+ G+V   ++ ++    A+K              +++D   K    R I     +L
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKF----------LESDDDKMVKKIAMREIK----LL 78

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + + H  L  L  V    K      ++     +    +           ++ Y  +++  
Sbjct: 79  KQLRHENLVNLLEVCKKKKRWYLVFEFVD-HTILDDLELFP-NGLDYQVVQKYLFQIING 136

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           + + H+  I++RD+KPENI++ ++G + L DF  +
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA 171

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 33/122 (27%)

Query: 250 YVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPD---- 302
           Y APE++ G      AVD W++G ++ EM  G   F G S  +  Y I            
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249

Query: 303 ---------------LVGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEF 336
                           + E  PL            +L ++ L  DP KR    E+  H+F
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309

Query: 337 FK 338
           F+
Sbjct: 310 FQ 311

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 72.8 bits (179), Expect = 2e-14
 Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 24/173 (13%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   +G G  G + L K++ ++E  A+K      +E             +  ++  E R
Sbjct: 12  RVGKKIGCGNFGELRLGKNLYTNEYVAIK------LEPMK---------SRAPQLHLEYR 56

Query: 79  VLRNVEH-PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
             + +     +P++       K+    ++   G  L  L      + FS  T+   A +L
Sbjct: 57  FYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCD-RTFSLKTVLMIAIQL 114

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGH-----IMLVDFDLSTK-LSPKTPQ 184
           +  +EY+H+  ++YRD+KPEN +I   G+     I ++DF L+ + + P+T +
Sbjct: 115 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKK 167

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 20/167 (11%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
              + +G GA G V    D  S E  A+K + R              +    +R   E  
Sbjct: 27  VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-----------QSEIFAKRAYRELL 75

Query: 79  VLRNVEHPLLPRLRGVL----STDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
           +L++++H  +  L  V     S   F   Y +      DL  +   +    FS++ I++ 
Sbjct: 76  LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK----FSEEKIQYL 131

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
             +++  L+Y+H+ G+V+RDLKP N+ + E+  + ++DF L+     
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 58.8 bits (143), Expect = 8e-10
 Identities = 33/160 (20%), Positives = 54/160 (33%), Gaps = 46/160 (28%)

Query: 244 FVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V T  Y APE+I     ++  VD WS+G ++ EML G T F+G    +   +IL     
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL----K 238

Query: 303 LVGEPTP--------------LRN----------------------LIRRLLEKDPTKRI 326
           + G P                +++                      L+ ++LE D  KR+
Sbjct: 239 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL 298

Query: 327 GVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
              +   H FF+                   F+       
Sbjct: 299 TAAQALTHPFFEP-----FRDPEEETEAQQPFDDSLEHEK 333

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +   +  G+ G V    D E     A+K ++  + + ++  + ++    K  R+  E R
Sbjct: 25  TVQRFISSGSYGAVCAGVDSEG-IPVAIKRVFNTVSDGRTVNILSDSFLCK--RVLREIR 81

Query: 79  VLRNVEHPLLPRLRGVL---STDKFVG-YAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFY 133
           +L +  HP +  LR +            Y +      DL   +  Q+     S   I+++
Sbjct: 82  LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV--ISPQHIQYF 139

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              ++L L  LH  G+V+RDL P NI++ +N  I + DF+L+
Sbjct: 140 MYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 47/174 (27%)

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR 289
           +R D+  + K++ +V    Y APE++   KG    VD WS G V+ EM      FRGS+ 
Sbjct: 181 AREDTADANKTH-YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239

Query: 290 KETFYRILCRPPDLVGEPTP--------------LRN----------------------- 312
                +I+    ++VG P                LRN                       
Sbjct: 240 YNQLNKIV----EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALD 295

Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
           LI ++LE +P +RI  E+   H +F+     L   +     +  RF  + + +D
Sbjct: 296 LIAKMLEFNPQRRISTEQALRHPYFE----SLFDPLDLTEGLSERFHFDESVTD 345

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 71.6 bits (176), Expect = 6e-14
 Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 25/170 (14%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISF 75
           R +  +G GA G V    D  +    A+K ++R     +  K              R   
Sbjct: 28  RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK--------------RAYR 73

Query: 76  EQRVLRNVEHPLLPRLRGVL----STDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           E R+L+++ H  +  L  V     + D F   Y +    G DL  L K +      +D I
Sbjct: 74  ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK---LGEDRI 130

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
           +F   +++  L Y+H  GI++RDLKP N+ + E+  + ++DF L+ +   
Sbjct: 131 QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 41/133 (30%)

Query: 244 FVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V T  Y APE+I     +   VD WS+G ++ EM+ G T F+GS   +    I+     
Sbjct: 185 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM----K 240

Query: 303 LVGEPTP--------------LRN----------------------LIRRLLEKDPTKRI 326
           + G P                ++                       L+ ++L  D  +R+
Sbjct: 241 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV 300

Query: 327 GVEEIKGHEFFKG 339
              E   H +F+ 
Sbjct: 301 TAGEALAHPYFES 313

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 71.5 bits (176), Expect = 7e-14
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 10/151 (6%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G    V+  +D  +++  A+K I +     ++K+  N       R I     +L+ +
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKI-KLGHRSEAKDGINRTA---LREIK----LLQEL 69

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP +  L         +    D+    DL  + K  S  + +   I+ Y    +  LEY
Sbjct: 70  SHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEY 127

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
           LH   I++RDLKP N+++ ENG + L DF L
Sbjct: 128 LHQHWILHRDLKPNNLLLDENGVLKLADFGL 158

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 30/119 (25%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------------ 296
           Y APE++ G + +   VD W++G +L E+L       G S  +   RI            
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 237

Query: 297 --LCRPPDLVG----EPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
             +C  PD V        PL            +LI+ L   +P  RI   +    ++F 
Sbjct: 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 70.8 bits (174), Expect = 9e-14
 Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 30/173 (17%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVK----DVESSESFALKVI-WRDLIEKKSKELTNNDNGD 68
            +  L I   +G G+ G V   +    DV      A+K++  +D   ++  E        
Sbjct: 35  PWCDLNIKEKIGAGSFGTVHRAEWHGSDV------AVKILMEQDFHAERVNEFLR----- 83

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMF 125
                  E  +++ + HP +    G   T      +I  +Y     L+  L K  + +  
Sbjct: 84  -------EVAIMKRLRHPNIVLFMGA-VTQPPN-LSIVTEYLSRGSLYRLLHKSGAREQL 134

Query: 126 SDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQENGHIMLVDFDLST 176
            +      A ++   + YLHN    IV+R+LK  N+++ +   + + DF LS 
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 3/98 (3%)

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK 290
           SR  + +   S S  GT E++APE++  +  +   D +S GV+L E+     P+   +  
Sbjct: 186 SRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245

Query: 291 ETFYRILC---RPPDLVGEPTPLRNLIRRLLEKDPTKR 325
           +    +     R          +  +I      +P KR
Sbjct: 246 QVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKR 283

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 70.2 bits (173), Expect = 1e-13
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 19/155 (12%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQRVL 80
           +G G  G VF  K+ E+ E  ALK +           L ++D G      R I     +L
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALREIC----LL 55

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + ++H  + RL  VL +DK +    ++C  +DL       +      + ++ +  +L+  
Sbjct: 56  KELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCN-GDLDPEIVKSFLFQLLKG 113

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           L + H+  +++RDLKP+N++I  NG + L +F L+
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 32/124 (25%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI--LCRPPD--- 302
           Y  P+++ G K +  ++D WS G +  E+     P F G+   +   RI  L   P    
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226

Query: 303 --------------LVGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFF 337
                         +    T L            +L++ LL+ +P +RI  EE   H +F
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286

Query: 338 KGVN 341
               
Sbjct: 287 SDFC 290

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 70.1 bits (172), Expect = 1e-13
 Identities = 55/363 (15%), Positives = 104/363 (28%), Gaps = 126/363 (34%)

Query: 18  LRIVSALGRGAKGVVFLVK----DVESSESFALKVI-WRDLIEKKSKELTNNDNGDKYRR 72
           + ++  +G+G  G V+       +V      A+K+   RD                    
Sbjct: 10  ITLLECVGKGRYGEVWRGSWQGENV------AVKIFSSRDEKSWF--------------- 48

Query: 73  ISFEQRV--LRNVEHPLLPRLRGV--LSTDKFVGYAI--DYCPGRDLHSLRKQQSEQMFS 126
              E  +     + H  +         S        +   Y     L+   +  +     
Sbjct: 49  --RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LD 103

Query: 127 DDTIRFYAAELVLALEYLH--------NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
             +       +   L +LH           I +RDLK +NI++++NG   + D  L+   
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163

Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS 238
           S                                                     S +   
Sbjct: 164 SQ----------------------------------------------------STNQLD 171

Query: 239 EKSNSFVGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET 292
             +N  VGT+ Y+APE+++             VD W+ G+VL E+             + 
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231

Query: 293 FY--------------RILCR-------PPDLVGEPTP--LRNLIRRLLEKDPTKRIGVE 329
            +              +++C        P     +PT   L  L++    ++P+ R+   
Sbjct: 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTAL 291

Query: 330 EIK 332
            IK
Sbjct: 292 RIK 294

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 71.2 bits (174), Expect = 1e-13
 Identities = 32/163 (19%), Positives = 75/163 (46%), Gaps = 21/163 (12%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   +G G+ G ++L  +++++E  A+K+                    K+ ++ +E +
Sbjct: 10  RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK---------------TKHPQLLYESK 54

Query: 79  VLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           + R ++    +P +R       +    +D   G  L  L    S +  S  T+   A ++
Sbjct: 55  IYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQM 112

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGH---IMLVDFDLSTK 177
           +  +E++H+   ++RD+KP+N ++        + ++DF L+ K
Sbjct: 113 INRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 25/170 (14%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISF 75
           + +S +G GA G V    D ++    A+K + R    +I  K              R   
Sbjct: 32  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK--------------RTYR 77

Query: 76  EQRVLRNVEHPLLPRLRGVL----STDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           E R+L++++H  +  L  V     S ++F   Y + +  G DL+++ K Q     +DD +
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHV 134

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
           +F   +++  L+Y+H+  I++RDLKP N+ + E+  + ++DF L+   + 
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 41/132 (31%)

Query: 244 FVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
           +V T  Y APEI+     ++  VD WS+G ++ E+L G T F G+   +    IL     
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 244

Query: 303 LVGEPTP--------------LRN----------------------LIRRLLEKDPTKRI 326
           LVG P                +++                      L+ ++L  D  KRI
Sbjct: 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 304

Query: 327 GVEEIKGHEFFK 338
              +   H +F 
Sbjct: 305 TAAQALAHAYFA 316

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 69.7 bits (171), Expect = 2e-13
 Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 34/176 (19%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDL---IEKKSKELTNNDNGDKY 70
           D+  + +   +GRGA GVV              K  WR     I    K++ +      +
Sbjct: 6   DYKEIEVEEVVGRGAFGVVC-------------KAKWRAKDVAI----KQIESESERKAF 48

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMFSD 127
                E R L  V HP + +L G    +      +  +Y  G  L++ L   +    ++ 
Sbjct: 49  IV---ELRQLSRVNHPNIVKLYGA-CLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTA 101

Query: 128 DTIRFYAAELVLALEYLHNM---GIVYRDLKPENIMIQENGHIM-LVDFDLSTKLS 179
                +  +    + YLH+M    +++RDLKP N+++   G ++ + DF  +  + 
Sbjct: 102 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 68.5 bits (168), Expect = 5e-13
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 236 DSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
           D      +  G+  ++APE+ EG  +    D +S G++L E++    PF           
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214

Query: 296 ILC----RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
                  RPP +   P P+ +L+ R   KDP++R  +EEI
Sbjct: 215 WAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEI 254

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 23/159 (14%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQRVL 80
           LG G    V+   +  +    ALK +             +++ G      R IS    ++
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEV-----------KLDSEEGTPSTAIREIS----LM 57

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL----HSLRKQQSEQMFSDDTIRFYAAE 136
           + ++H  + RL  V+ T+  +    ++    DL     S     + +    + ++++  +
Sbjct: 58  KELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           L+  L + H   I++RDLKP+N++I + G + L DF L+
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 41/149 (27%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPD---- 302
           Y AP+++ G + +  ++D WS G +L EM+ G   F G++ +E    I  +   P+    
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233

Query: 303 -------------LVGEPTPLRN----------------LIRRLLEKDPTKRIGVEEIKG 333
                            P  LR                  +  LL+ +P  R+  ++   
Sbjct: 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293

Query: 334 HEFFKGVNWELLLKISRPPNIPARFEHEN 362
           H +F           +      +   H +
Sbjct: 294 HPWFAEYY-----HHASMGGSRSHHHHHH 317

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 69.4 bits (170), Expect = 3e-13
 Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 30/176 (17%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +   +G G  G+++L       E  A  V+          ++   +NG  +  + F QR
Sbjct: 40  VLGKKIGSGGFGLIYLAFPTNKPEKDARHVV----------KVEYQENGPLFSELKFYQR 89

Query: 79  V-----------LRNVEHPLLPRLRG----VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
           V            + +++  +P   G          +    ++   G DL  +  Q    
Sbjct: 90  VAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN--G 146

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTK 177
            F   T+      ++  LEY+H    V+ D+K  N+++  +    + L D+ LS +
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYR 202

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 68.7 bits (168), Expect = 8e-13
 Identities = 33/171 (19%), Positives = 74/171 (43%), Gaps = 26/171 (15%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISF 75
           + +  +G GA+G+V    D     + A+K + R   +    K              R   
Sbjct: 65  QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK--------------RAYR 110

Query: 76  EQRVLRNVEHPLLPRLRGVL----STDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           E  +++ V H  +  L  V     + ++F   Y +      +L  + + +       + +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERM 166

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK 181
            +   +++  +++LH+ GI++RDLKP NI+++ +  + ++DF L+      
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 57.2 bits (138), Expect = 4e-09
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 55/170 (32%)

Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+     F G    + + +++    + 
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 278

Query: 304 VGEPTP-----------------------------------------------LRNLIRR 316
           +G P P                                                R+L+ +
Sbjct: 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 338

Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
           +L  DP KRI V++   H +                  P  ++ + +E +
Sbjct: 339 MLVIDPAKRISVDDALQHPYIN----VWYDPAEVEAPPPQIYDKQLDERE 384

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 68.1 bits (167), Expect = 9e-13
 Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 23/177 (12%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVI--WRDLIEKKSKELTNNDNGDKYRRISFE 76
             +S +G GA G+V    D  +    A+K I  +      +              R   E
Sbjct: 30  TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--------------RTLRE 75

Query: 77  QRVLRNVEHPLLPRLRGVL---STDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
            ++L    H  +  +  ++   + ++    Y +      DL+ L K Q     S+D I +
Sbjct: 76  IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICY 132

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +  +++  L+Y+H+  +++RDLKP N+++     + + DF L+    P        T
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 49/176 (27%)

Query: 231 SRSDSDSSEKSNS---FVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRG 286
           +R      + +     +V T  Y APEI+   KG+  ++D WS+G +L EML     F G
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234

Query: 287 SSRKETFYRILCRPPDLVGEPTP--------------LRN-------------------- 312
               +    IL     ++G P+               L +                    
Sbjct: 235 KHYLDQLNHIL----GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKA 290

Query: 313 --LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
             L+ ++L  +P KRI VE+   H + +          S  P   A F+ +    D
Sbjct: 291 LDLLDKMLTFNPHKRIEVEQALAHPYLEQ-----YYDPSDEPIAEAPFKFDMELDD 341

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 57/366 (15%), Positives = 103/366 (28%), Gaps = 124/366 (33%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVK----DVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
               +++V  +G+G  G V++ K     V      A+KV      E+ S           
Sbjct: 35  IAKQIQMVKQIGKGRYGEVWMGKWRGEKV------AVKVF--FTTEEASWF--------- 77

Query: 70  YRRISFEQRV--LRNVEHPLLPRLRGV--LSTDKFVGYAI--DYCPGRDLHSLRKQQSEQ 123
                 E  +     + H  +          T  +    +  DY     L+   K  +  
Sbjct: 78  -----RETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-- 130

Query: 124 MFSDDTIRFYAAELVLALEYLH--------NMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                ++   A   V  L +LH           I +RDLK +NI++++NG   + D  L+
Sbjct: 131 -LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189

Query: 176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDS 235
            K    T                                                    +
Sbjct: 190 VKFISDT----------------------------------------------------N 197

Query: 236 DSSEKSNSFVGTEEYVAPEIIEGKGH------DFAVDWWSLGVVLHEMLYGATPFRGSSR 289
           +     N+ VGT+ Y+ PE+++   +          D +S G++L E+            
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257

Query: 290 KETFYRILC------------------RPP-----DLVGEPTPLRNLIRRLLEKDPTKRI 326
            +  Y  L                   RP              +  L+      +P  R+
Sbjct: 258 YQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRL 317

Query: 327 GVEEIK 332
               +K
Sbjct: 318 TALRVK 323

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 67.2 bits (165), Expect = 1e-12
 Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 20/155 (12%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQRVL 80
           LG G    V+  K   +    ALK I              ++ G      R +S    +L
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEI-----------RLEHEEGAPCTAIREVS----LL 54

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           ++++H  +  L  ++ T+K +    +Y   +DL          + +   ++ +  +L+  
Sbjct: 55  KDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRG 112

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           L Y H   +++RDLKP+N++I E G + L DF L+
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 147

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 36/142 (25%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPDL--- 303
           Y  P+I+ G   +   +D W +G + +EM  G   F GS+ +E  + I  +   P     
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225

Query: 304 ---------------VGEPTPLRN-----------LIRRLLEKDPTKRIGVEEIKGHEFF 337
                                L +           L+ +LL+ +   RI  E+   H FF
Sbjct: 226 PGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285

Query: 338 KGVNWELLLKISRPPNIPARFE 359
                 L  +I + P+  + F 
Sbjct: 286 ----LSLGERIHKLPDTTSIFA 303

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 35/186 (18%), Positives = 72/186 (38%), Gaps = 32/186 (17%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALK-VIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
             +  LG G  G+VF   D +  +  A+K ++  D    K                  E 
Sbjct: 14  MDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK--------------HALREI 59

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGR-------------DLHSLRKQQSEQM 124
           +++R ++H  + ++  +L                             DL ++ +Q     
Sbjct: 60  KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP--- 116

Query: 125 FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSPKTP 183
             ++  R +  +L+  L+Y+H+  +++RDLKP N+ I  E+  + + DF L+  + P   
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS 176

Query: 184 QASPKT 189
                +
Sbjct: 177 HKGHLS 182

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 40/131 (30%)

Query: 245 VGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           + T+ Y +P ++     +  A+D W+ G +  EML G T F G+   E    IL    + 
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL----ES 240

Query: 304 VGEPT------------------------PLR-----------NLIRRLLEKDPTKRIGV 328
           +                            PL            + + ++L   P  R+  
Sbjct: 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300

Query: 329 EEIKGHEFFKG 339
           EE   H +   
Sbjct: 301 EEALSHPYMSI 311

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 66.4 bits (163), Expect = 2e-12
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 20/155 (12%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQRVL 80
           +G G  GVV+  ++    E+FALK I           L   D G      R IS    +L
Sbjct: 10  IGEGTYGVVYKAQN-NYGETFALKKI----------RLEKEDEGIPSTTIREIS----IL 54

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + ++H  + +L  V+ T K +    ++   +DL  L            T + +  +L+  
Sbjct: 55  KELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCE-GGLESVTAKSFLLQLLNG 112

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           + Y H+  +++RDLKP+N++I   G + + DF L+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 49.4 bits (119), Expect = 7e-07
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 31/123 (25%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPD---- 302
           Y AP+++ G K +   +D WS+G +  EM+ G   F G S  +   RI  +   P+    
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW 225

Query: 303 -------------LVGEPTPLRN-----------LIRRLLEKDPTKRIGVEEIKGHEFFK 338
                         V EP P  +           L+ ++L+ DP +RI  ++   H +FK
Sbjct: 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

Query: 339 GVN 341
             N
Sbjct: 286 ENN 288

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 34/168 (20%), Positives = 74/168 (44%), Gaps = 20/168 (11%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           + +  +G GA+G+V    D     + A+K + R              N    +R   E  
Sbjct: 28  QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-----------QNQTHAKRAYRELV 76

Query: 79  VLRNVEHPLLPRLRGVL----STDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
           +++ V H  +  L  V     S ++F   Y +      +L  + + +       + + + 
Sbjct: 77  LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYL 132

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK 181
             +++  +++LH+ GI++RDLKP NI+++ +  + ++DF L+      
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 51/143 (35%)

Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
           +V T  Y APE+I G G+   VD WS+G ++ EM+ G   F G+   + + +++    + 
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 241

Query: 304 VGEPTP-----------------------------------------------LRNLIRR 316
           +G P P                                                R+L+ +
Sbjct: 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 301

Query: 317 LLEKDPTKRIGVEEIKGHEFFKG 339
           +L  D +KRI V+E   H +   
Sbjct: 302 MLVIDASKRISVDEALQHPYINV 324

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 50/366 (13%), Positives = 98/366 (26%), Gaps = 124/366 (33%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVK----DVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
               + +  ++G+G  G V+  K    +V      A+K+                 +  +
Sbjct: 40  IARTIVLQESIGKGRFGEVWRGKWRGEEV------AVKIF----------------SSRE 77

Query: 70  YRRISFEQRV--LRNVEHPLLPRLRGV--LSTDKFVGYAI--DYCPGRDLHSLRKQQSEQ 123
            R    E  +     + H  +             +    +  DY     L     + +  
Sbjct: 78  ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-- 135

Query: 124 MFSDDTIRFYAAELVLALEYLH--------NMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             + + +   A      L +LH           I +RDLK +NI++++NG   + D  L+
Sbjct: 136 -VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194

Query: 176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDS 235
            +    T                                                     
Sbjct: 195 VRHDSAT----------------------------------------------------D 202

Query: 236 DSSEKSNSFVGTEEYVAPEIIEGKG------HDFAVDWWSLGVVLHEMLYGATPFRGSSR 289
                 N  VGT+ Y+APE+++              D +++G+V  E+    +       
Sbjct: 203 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262

Query: 290 KETFYRIL------------------CRPP-----DLVGEPTPLRNLIRRLLEKDPTKRI 326
            +  Y  L                   RP              +  ++R     +   R+
Sbjct: 263 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL 322

Query: 327 GVEEIK 332
               IK
Sbjct: 323 TALRIK 328

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 72/381 (18%), Positives = 120/381 (31%), Gaps = 137/381 (35%)

Query: 24  LGRGAKGVVF--LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR 81
           +GRG  G V+    KD +  + +ALK I     E     ++        R I     +LR
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQI-----EGTGISMSA------CREI----ALLR 73

Query: 82  NVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSL-------RKQQSEQMFSDDTIRF 132
            ++HP +  L+ V     D+ V    DY    DL  +       +  +         ++ 
Sbjct: 74  ELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKS 132

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMI----QENGHIMLVDFDLSTKLSPKTPQASPK 188
              +++  + YLH   +++RDLKP NI++     E G + + D   +             
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA------------- 179

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                         R F                      + P +  +D        V T 
Sbjct: 180 --------------RLF----------------------NSPLKPLADLDPV----VVTF 199

Query: 249 EYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----- 302
            Y APE++ G  H   A+D W++G +  E+L     F      E          D     
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ--EDIKTSNPYHHDQLDRI 257

Query: 303 --LVGEPTP-------------------------------------------LRNLIRRL 317
             ++G P                                               +L+++L
Sbjct: 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKL 317

Query: 318 LEKDPTKRIGVEEIKGHEFFK 338
           L  DP KRI  E+     +F 
Sbjct: 318 LTMDPIKRITSEQAMQDPYFL 338

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 66.7 bits (163), Expect = 3e-12
 Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 27/190 (14%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL----------------- 61
            +   LG G+ G+V  V D+ES + FALK + +D    K++EL                 
Sbjct: 10  SLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-RYKNRELDIMKVLDHVNIIKLVDY 68

Query: 62  ---TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVG-YAI-DYCPGRDLHSL 116
              T ++     +      ++              +++  +      I +Y P   LH +
Sbjct: 69  FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKV 127

Query: 117 RKQ--QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVDFD 173
            K   +S +    + I  Y  +L  A+ ++H++GI +RD+KP+N+++  ++  + L DF 
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFG 187

Query: 174 LSTKLSPKTP 183
            + KL P  P
Sbjct: 188 SAKKLIPSEP 197

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 55.9 bits (135), Expect = 9e-09
 Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 47/184 (25%)

Query: 236 DSSEKSNSFVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY 294
             SE S +++ +  Y APE++ G      ++D WS+G V  E++ G   F G +  +   
Sbjct: 193 IPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLV 252

Query: 295 RILCRPPDLVGEPT----------------------PLRN------------LIRRLLEK 320
           RI+     ++G PT                        R             L+ ++L  
Sbjct: 253 RII----QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308

Query: 321 DPTKRIGVEEIKGHEFFKG---VNWELLLKISRPPN-----IPARFEHENNESDGRGRDG 372
           +P  RI   E   H FF          +   S  P+     IP  F     E      + 
Sbjct: 309 EPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGNV 368

Query: 373 TKEI 376
              I
Sbjct: 369 LNRI 372

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 65.2 bits (159), Expect = 5e-12
 Identities = 24/167 (14%), Positives = 45/167 (26%), Gaps = 17/167 (10%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R++   G       +   D       AL  +                  D  +       
Sbjct: 34  RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQG----------VLPDDVLQETLSRTL 83

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
            L  ++ P + R+  V+ T        ++  G  L  +             IR     L 
Sbjct: 84  RLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD---TSPSPVGAIR-AMQSLA 139

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
            A +  H  G+      P  + +  +G ++L        +    PQ 
Sbjct: 140 AAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT---MPDANPQD 183

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 9/89 (10%), Positives = 21/89 (23%), Gaps = 15/89 (16%)

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
           +     +          +   D   +G  L+ +L    P   +  +              
Sbjct: 170 LAYPATMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222

Query: 305 --------GEPTPLRNLIRRLLEKDPTKR 325
                     P  +  +  R ++ D   R
Sbjct: 223 IEPADIDRDIPFQISAVAARSVQGDGGIR 251

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 64.5 bits (158), Expect = 1e-11
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 20/155 (12%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQRVL 80
           +G G  GVV+  KD       ALK I           L   D G      R IS    +L
Sbjct: 29  VGEGTYGVVYKAKD-SQGRIVALKRI----------RLDAEDEGIPSTAIREIS----LL 73

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + + HP +  L  V+ +++ +    ++   +DL  +  +       D  I+ Y  +L+  
Sbjct: 74  KELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRG 131

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           + + H   I++RDLKP+N++I  +G + L DF L+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 40/128 (31%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
           Y AP+++ G K +  +VD WS+G +  EM+ G   F G +  +   +I      ++G P 
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF----SILGTPN 240

Query: 309 ------------------------PLRN-----------LIRRLLEKDPTKRIGVEEIKG 333
                                   P  +           L+  +L  DP KRI   +   
Sbjct: 241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300

Query: 334 HEFFKGVN 341
           H +FK ++
Sbjct: 301 HPYFKDLD 308

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 64.1 bits (157), Expect = 2e-11
 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)

Query: 24  LGRGAKGVVFLVKDVESSESF-ALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQRV 79
           +G GA G VF  +D+++   F ALK +           +   + G      R ++  +  
Sbjct: 19  IGEGAYGKVFKARDLKNGGRFVALKRV----------RVQTGEEGMPLSTIREVAVLRH- 67

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAI-----DYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           L   EHP + RL  V +  +           ++   +DL +   +  E     +TI+   
Sbjct: 68  LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMM 126

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
            +L+  L++LH+  +V+RDLKP+NI++  +G I L DF L
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 32/145 (22%)

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPD----- 302
           Y APE++    +   VD WS+G +  EM      FRGSS  +   +I  +   P      
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244

Query: 303 ----------LVGEPTPLRN-----------LIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                           P+             L+ + L  +P KRI       H +F+ + 
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304

Query: 342 WELLLKISRPPNIPA-RFEHENNES 365
                K +   ++P  +   E N +
Sbjct: 305 ---RCKENLDSHLPPSQNTSELNTA 326

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 35/180 (19%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++   +G+G  G ++L  D+ SSES                ++  +DNG     +  E +
Sbjct: 38  KVGLPIGQGGFGCIYLA-DMNSSESVGSD-------APCVVKVEPSDNG----PLFTELK 85

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGY-------------------AIDYCPGRDLHSLRKQ 119
             +    P   +        K++G                     +D   G DL  + + 
Sbjct: 86  FYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA 144

Query: 120 QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTK 177
            + + FS  T+   +  ++  LEY+H    V+ D+K  N+++  +    + LVD+ L+ +
Sbjct: 145 NA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR 203

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 27/176 (15%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK---YRRISFEQRVL 80
           +G+G  G VF  +  ++ +  ALK +           + N   G      R I     +L
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKV----------LMENEKEGFPITALREIK----IL 70

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAI--------DYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           + ++H  +  L  +  T                D+C   DL  L      + F+   I+ 
Sbjct: 71  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVK-FTLSEIKR 128

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
               L+  L Y+H   I++RD+K  N++I  +G + L DF L+   S        +
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 39/155 (25%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPDL--- 303
           Y  PE++ G + +   +D W  G ++ EM   +   +G++ +     I  LC        
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253

Query: 304 ---------------VGEPTPLR-------------NLIRRLLEKDPTKRIGVEEIKGHE 335
                           G+   ++             +LI +LL  DP +RI  ++   H+
Sbjct: 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313

Query: 336 FFKGVNWELLLKISRPPNIPARFEHENNESDGRGR 370
           FF    W   +  S    + +       E     R
Sbjct: 314 FF----WSDPMP-SDLKGMLSTHLTSMFEYLAPPR 343

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 62.7 bits (153), Expect = 5e-11
 Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 25/159 (15%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY---RRISFEQRVL 80
           LG G  G V+   D  ++E+ A+K I           L + + G      R +S    +L
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRI----------RLEHEEEGVPGTAIREVS----LL 87

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLA 140
           + ++H  +  L+ V+  +  +    +Y    DL     +  +   S   I+ +  +L+  
Sbjct: 88  KELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPD--VSMRVIKSFLYQLING 144

Query: 141 LEYLHNMGIVYRDLKPENIMI-----QENGHIMLVDFDL 174
           + + H+   ++RDLKP+N+++      E   + + DF L
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 32/121 (26%)

Query: 250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LCRPPD---- 302
           Y  PEI+ G + +  +VD WS+  +  EML     F G S  +  ++I  +   PD    
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262

Query: 303 -------------LVGEPTPLRN------------LIRRLLEKDPTKRIGVEEIKGHEFF 337
                               L+             L+  +LE DP KRI  +    H +F
Sbjct: 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322

Query: 338 K 338
            
Sbjct: 323 S 323

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 37/196 (18%), Positives = 59/196 (30%), Gaps = 67/196 (34%)

Query: 106 DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH---------NMGIVYRDLKP 156
           +Y P     SL K  S       +    A  +   L YLH            I +RDL  
Sbjct: 92  EYYPNG---SLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148

Query: 157 ENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISL 216
            N++++ +G  ++ DF LS                                         
Sbjct: 149 RNVLVKNDGTCVISDFGLS----------------------------------------- 167

Query: 217 EDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG-------KGHDFAVDWWS 269
                              +    + S VGT  Y+APE++EG       +     VD ++
Sbjct: 168 -------MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYA 220

Query: 270 LGVVLHEMLYGATPFR 285
           LG++  E+    T   
Sbjct: 221 LGLIYWEIFMRCTDLF 236

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 55.8 bits (135), Expect = 8e-09
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 18/167 (10%)

Query: 13  LDFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           LD + + I   +G G  G V    L    +   S A+K +     EK+ ++         
Sbjct: 42  LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG------ 95

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDD 128
                 E  ++   +HP + RL GV++  K V    +Y     L S LRK  ++  F+  
Sbjct: 96  ------EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVI 147

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +      +   ++YL +MG V+RDL   NI+I  N    + DF L 
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 13/124 (10%)

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPDLVG 305
           +PE I  +    A D WS G+VL E++ YG  P+   S ++    +     L  P D   
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC-- 275

Query: 306 EPTPLRNLIRRLLEKDPTKRIGVEEIKG--HEFFKGVNWELLLKISRPPNIPARFEHENN 363
            P  L  L+    +KD   R   E+I     +  +  N   L  I+     P+    + +
Sbjct: 276 -PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR--NPGSLKIITSAAARPSNLLLDQS 332

Query: 364 ESDG 367
             D 
Sbjct: 333 NVDI 336

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 22/176 (12%)

Query: 6   NDRPIRSLDFSCLRIVSALGRGAKGVVF---LVKDVESSESF-ALKVIWRDLIEKKSKEL 61
           N   +R L  +  + +  LG GA G V+    + + E  +   A+K +      K +KE+
Sbjct: 5   NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64

Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQ 119
            +            E  V+ +V++P + RL G+  T       I    P   L   +R+ 
Sbjct: 65  LD------------EAYVMASVDNPHVCRLLGICLTSTV--QLITQLMPFGCLLDYVREH 110

Query: 120 QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +         +  +  ++   + YL +  +V+RDL   N++++   H+ + DF L+
Sbjct: 111 KDN--IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 21/168 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           +    + +   +G G  G V     +     + + A+K       +   ++         
Sbjct: 12  IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ------ 65

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSD 127
                 E   +R  +HP + +L GV++ +    + I + C   +L S L+ ++       
Sbjct: 66  ------EALTMRQFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKYS--LDL 115

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            ++  YA +L  AL YL +   V+RD+   N+++  N  + L DF LS
Sbjct: 116 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 54.1 bits (130), Expect = 5e-08
 Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 21/168 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           +    + +   +G G  G V     +     + + A+K       +   ++         
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ------ 440

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSD 127
                 E   +R  +HP + +L GV++ +    + I + C   +L S L+ ++       
Sbjct: 441 ------EALTMRQFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKFS--LDL 490

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            ++  YA +L  AL YL +   V+RD+   N+++  N  + L DF LS
Sbjct: 491 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 17/165 (10%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           L+   L +   +GRG  G VF  +    +   A+K     L      +            
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ--------- 161

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSDDTI 130
              E R+L+   HP + RL GV +  + + Y + +   G D  + LR + +       T+
Sbjct: 162 ---EARILKQYSHPNIVRLIGVCTQKQPI-YIVMELVQGGDFLTFLRTEGAR--LRVKTL 215

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                +    +EYL +   ++RDL   N ++ E   + + DF +S
Sbjct: 216 LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 18/167 (10%)

Query: 13  LDFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           ++ S + I   +G G  G V    L    +     A+K +     E++ ++  +      
Sbjct: 46  IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS------ 99

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDD 128
                 E  ++   +HP + RL GV++  +      +Y     L + LR    +  F+  
Sbjct: 100 ------EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIM 151

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +      +   + YL ++G V+RDL   N+++  N    + DF LS
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 21/169 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVFL----VKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
           +  SC+     +G G  G V+         +     A+K +     EK+  +        
Sbjct: 41  IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG----- 95

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFS 126
                  E  ++    H  + RL GV+S  K +   I +Y     L   LR++  E  FS
Sbjct: 96  -------EAGIMGQFSHHNIIRLEGVISKYKPM-MIITEYMENGALDKFLREKDGE--FS 145

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              +      +   ++YL NM  V+RDL   NI++  N    + DF LS
Sbjct: 146 VLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS 194

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 23/169 (13%)

Query: 14  DFSCLRIVSALGRGAKGVVF--LVKDVESSESF-ALKVIWRDLIEKKSKELTNNDNGDKY 70
               +     +GRG  G V+   + D +  +   A+K              + N   D  
Sbjct: 23  SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVK--------------SLNRITDIG 68

Query: 71  RRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFS 126
               F  E  ++++  HP +  L G+    +     +  Y    DL + +R +      +
Sbjct: 69  EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PT 126

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              +  +  ++   ++YL +   V+RDL   N M+ E   + + DF L+
Sbjct: 127 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 175

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 17/164 (10%)

Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKV-IWRDLIEKKSKELTNNDNGDKYRRIS 74
             L+ +  LG G  G V L     +++     V +      K  K      +   +++  
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAV------KALKADAGPQHRSGWKQ-- 82

Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMFSDDTIR 131
            E  +LR + H  + + +G           +  +Y P   L   L +           + 
Sbjct: 83  -EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGLAQLL 137

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +A ++   + YLH    ++RDL   N+++  +  + + DF L+
Sbjct: 138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 53.6 bits (129), Expect = 7e-08
 Identities = 58/323 (17%), Positives = 116/323 (35%), Gaps = 86/323 (26%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           ++ + + +   LG G  G V+     + S + A+K +  D +E +               
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------------- 262

Query: 73  ISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
             F  E  V++ ++HP L +L GV + +       ++    +L   LR+   +++ +   
Sbjct: 263 --FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 320

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           +   A ++  A+EYL     ++R+L   N          LV  +   K++          
Sbjct: 321 LYM-ATQISSAMEYLEKKNFIHRNLAARNC---------LVGENHLVKVA---------- 360

Query: 190 VLAANTRSGIKKRRSF-LSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                          F LS+       +    ++   G   P +                
Sbjct: 361 --------------DFGLSRL------MTGDTYTAHAGAKFPIK---------------- 384

Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
            + APE +         D W+ GV+L E+  YG +P+ G    + +  +     + RP  
Sbjct: 385 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443

Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
               P  +  L+R   + +P+ R
Sbjct: 444 C---PEKVYELMRACWQWNPSDR 463

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 21/168 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           +    + +   LG G  G V+            + A+K           K+    DN +K
Sbjct: 9   IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC---------KKDCTLDNKEK 59

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSD 127
           +     E  +++N++HP + +L G++  +    + I +  P  +L   L + ++      
Sbjct: 60  FMS---EAVIMKNLDHPHIVKLIGIIEEEPT--WIIMELYPYGELGHYLERNKNS--LKV 112

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            T+  Y+ ++  A+ YL ++  V+RD+   NI++     + L DF LS
Sbjct: 113 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 21/168 (12%)

Query: 14  DFSCLRIVSALGRGAKGVVF--LVKDVESSESF-ALKVIWRDLIEKKSKELTNNDNGDKY 70
               +     +GRG  G V+   + D +  +   A+K              + N   D  
Sbjct: 87  SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVK--------------SLNRITDIG 132

Query: 71  RRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSD 127
               F  E  ++++  HP +  L G+    +     +  Y    DL +  + ++      
Sbjct: 133 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 192

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           D I F   ++   +++L +   V+RDL   N M+ E   + + DF L+
Sbjct: 193 DLIGF-GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 30/169 (17%), Positives = 66/169 (39%), Gaps = 22/169 (13%)

Query: 13  LDFSCLRIVSALGRGAKGVVF---LVKDVESSESF-ALKVIWRDLIEKKSKELTNNDNGD 68
              + LR +  LG G  G V     + + ES +    +KVI      +  + +T+     
Sbjct: 10  FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD----- 64

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFS 126
                      + +++H  + RL G+          +  Y P   L   +R+ +      
Sbjct: 65  -------HMLAIGSLDHAHIVRLLGLCPGSSL--QLVTQYLPLGSLLDHVRQHRGA--LG 113

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              +  +  ++   + YL   G+V+R+L   N++++    + + DF ++
Sbjct: 114 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 22/167 (13%)

Query: 16  SCLRIVSALGRGAKGVVFL----VKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR 71
             L+ +  LG+G  G V +         + E  A+K +         +  T     D  R
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---------QHSTEEHLRDFER 91

Query: 72  RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMFSDD 128
               E  +L++++H  + + +GV  +       +  +Y P   L   L+K +        
Sbjct: 92  ----EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHI 145

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +  Y +++   +EYL     ++RDL   NI+++    + + DF L+
Sbjct: 146 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 22/176 (12%)

Query: 6   NDRPIRSLDFSCLRIVSALGRGAKGVVF---LVKDVESSESF-ALKVIWRDLIEKKSKEL 61
           N   +R L  +  + +  LG GA G V+    + + E  +   A+K +      K +KE+
Sbjct: 5   NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64

Query: 62  TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQ 119
            +            E  V+ +V++P + RL G+  T       I    P   L   +R+ 
Sbjct: 65  LD------------EAYVMASVDNPHVCRLLGICLTSTV--QLITQLMPFGCLLDYVREH 110

Query: 120 QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           +         +  +  ++   + YL +  +V+RDL   N++++   H+ + DF L+
Sbjct: 111 KDN--IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 20/165 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +    L++   LG G  G V+                +    +   K  T          
Sbjct: 185 IPRESLKLEKKLGAGQFGEVW-------------MATYNKHTKVAVK--TMKPGSMSVEA 229

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSDDTI 130
              E  V++ ++H  L +L  V++ +    Y I ++     L   L+  +  +      I
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLI 287

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            F +A++   + ++     ++RDL+  NI++  +    + DF L+
Sbjct: 288 DF-SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 33/169 (19%), Positives = 68/169 (40%), Gaps = 23/169 (13%)

Query: 14  DFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           +         +G+G  GVV+    +   ++    A+K              + +   +  
Sbjct: 19  ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIK--------------SLSRITEMQ 64

Query: 71  RRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFS 126
           +  +F  E  ++R + HP +  L G++   + + + +  Y    DL   +R  Q      
Sbjct: 65  QVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVK 124

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           D  +  +  ++   +EYL     V+RDL   N M+ E+  + + DF L+
Sbjct: 125 D--LISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLA 171

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 19/168 (11%)

Query: 13  LDFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           +    LR++  LG G+ GVV           + S A+K +       K   L+  +  D 
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-------KPDVLSQPEAMDD 67

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSD 127
           + R   E   + +++H  L RL GV+ T       + +  P   L   LRK Q    F  
Sbjct: 68  FIR---EVNAMHSLDHRNLIRLYGVVLTPPM--KMVTELAPLGSLLDRLRKHQGH--FLL 120

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            T+  YA ++   + YL +   ++RDL   N+++     + + DF L 
Sbjct: 121 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM 168

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 21/167 (12%)

Query: 16  SCLRIVSALGRGAKGVVFL----VKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR 71
             L+ +  LG G  G V L     +   + E  A+K +         K  +  ++    +
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL---------KPESGGNHIADLK 71

Query: 72  RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMFSDD 128
           +   E  +LRN+ H  + + +G+ + D   G  +  ++ P   L   L K +++   +  
Sbjct: 72  K---EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLK 126

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
               YA ++   ++YL +   V+RDL   N++++    + + DF L+
Sbjct: 127 QQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 20/165 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +    LR+   LG+G  G V+                W        K  T          
Sbjct: 181 IPRESLRLEVKLGQGCFGEVW-------------MGTWNGTTRVAIK--TLKPGTMSPEA 225

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSDDTI 130
              E +V++ + H  L +L  V+S +    Y + +Y     L   L+ +  + +     +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLV 283

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              AA++   + Y+  M  V+RDL+  NI++ EN    + DF L+
Sbjct: 284 DM-AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 11/81 (13%)

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPPDLV 304
           APE           D WS G++L E+   G  P+ G   +E        YR +  PP+  
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MPCPPEC- 406

Query: 305 GEPTPLRNLIRRLLEKDPTKR 325
             P  L +L+ +   K+P +R
Sbjct: 407 --PESLHDLMCQCWRKEPEER 425

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 60/369 (16%), Positives = 111/369 (30%), Gaps = 128/369 (34%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
                L+++    RG  G V+  K    +E  A+K+    + +K+S +            
Sbjct: 21  FQSMPLQLLEVKARGRFGCVW--KAQLLNEYVAVKIF--PIQDKQSWQ------------ 64

Query: 73  ISFEQRV--LRNVEHPLLPRLRG--VLSTDKFVGYAI--DYCPGRDLHSLRKQQS---EQ 123
              E  V  L  ++H  + +  G     T   V   +   +     L    K       +
Sbjct: 65  --NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNE 122

Query: 124 MFSDDTIRFYAAELVLALEYLH----------NMGIVYRDLKPENIMIQENGHIMLVDFD 173
           +         A  +   L YLH             I +RD+K +N+         L+  +
Sbjct: 123 LCH------IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV---------LLKNN 167

Query: 174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSF-LSKFCSSGISLEDPVHSPRIGPDPPSR 232
           L+  ++                         F L+    +G S  D              
Sbjct: 168 LTACIA------------------------DFGLALKFEAGKSAGD-------------- 189

Query: 233 SDSDSSEKSNSFVGTEEYVAPEIIEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGS 287
                   ++  VGT  Y+APE++EG     +     +D +++G+VL E+    T   G 
Sbjct: 190 --------THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241

Query: 288 SRK---------------ETFYRILC----RP--PDLVGEPTPLR---NLIRRLLEKDPT 323
             +               E    ++     RP   D   +   +      I    + D  
Sbjct: 242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAE 301

Query: 324 KRIGVEEIK 332
            R+    + 
Sbjct: 302 ARLSAGCVG 310

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 20/165 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +    LR+   LG+G  G V+                W        K  T          
Sbjct: 264 IPRESLRLEVKLGQGCFGEVW-------------MGTWNGTTRVAIK--TLKPGTMSPEA 308

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSDDTI 130
              E +V++ + H  L +L  V+S +    Y + +Y     L   L+ +  + +     +
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLV 366

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              AA++   + Y+  M  V+RDL+  NI++ EN    + DF L+
Sbjct: 367 DM-AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 410

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 11/81 (13%)

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPPDLV 304
           APE           D WS G++L E+   G  P+ G   +E        YR +  PP+  
Sbjct: 432 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MPCPPEC- 489

Query: 305 GEPTPLRNLIRRLLEKDPTKR 325
             P  L +L+ +   K+P +R
Sbjct: 490 --PESLHDLMCQCWRKEPEER 508

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 48.7 bits (117), Expect = 1e-06
 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 38/174 (21%)

Query: 13  LDFSCLRIVSALGRGAKGVVFL----VKDVESSESFALKVI-----WRDLIEKKSKELTN 63
           L+   L+++  +G+G  G V L       V      A+K I      +  +         
Sbjct: 18  LNMKELKLLQTIGKGEFGDVMLGDYRGNKV------AVKCIKNDATAQAFLA-------- 63

Query: 64  NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQS 121
                       E  V+  + H  L +L GV+  +K   Y + +Y     L   LR +  
Sbjct: 64  ------------EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 111

Query: 122 EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             +  D  ++F + ++  A+EYL     V+RDL   N+++ E+    + DF L+
Sbjct: 112 SVLGGDCLLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 22/167 (13%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           ++ + + +   LG G  G V+     + S + A+K +  D +E +               
Sbjct: 10  MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------------- 55

Query: 73  ISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSDD 128
             F  E  V++ ++HP L +L GV + +    Y I ++    +L   LR+   +++ +  
Sbjct: 56  --FLKEAAVMKEIKHPNLVQLLGVCTREPPF-YIITEFMTYGNLLDYLRECNRQEVSAVV 112

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +   A ++  A+EYL     ++RDL   N ++ EN  + + DF LS
Sbjct: 113 LLYM-ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 22/170 (12%)

Query: 13  LDFSCLRIVSALGRGAKGVVFL----VKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
            +   L+ +  LG+G  G V +         + E  A+K +         +  T     D
Sbjct: 7   FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---------QHSTEEHLRD 57

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMF 125
             R    E  +L++++H  + + +GV  +       +  +Y P   L   L+K +     
Sbjct: 58  FER----EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--I 111

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
               +  Y +++   +EYL     ++RDL   NI+++    + + DF L+
Sbjct: 112 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 25/170 (14%)

Query: 13  LDFSCLRIVS-ALGRGAKGVVF--LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           LD   L +    LG G  G V     +  +  ++ A+K++         K     +  D 
Sbjct: 13  LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL---------KN----EANDP 59

Query: 70  YRRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMF 125
             +     E  V++ +++P + R+ G+   + +    + +      L+  L++ +     
Sbjct: 60  ALKDELLAEANVMQQLDNPYIVRMIGICEAESW--MLVMEMAELGPLNKYLQQNRH---V 114

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            D  I     ++ + ++YL     V+RDL   N+++    +  + DF LS
Sbjct: 115 KDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 164

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 34/175 (19%), Positives = 70/175 (40%), Gaps = 29/175 (16%)

Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL----TNNDNGDKYR 71
             + +   LG+G+ G+V+             + + + +++ + +      T N+      
Sbjct: 25  EKITMSRELGQGSFGMVY-------------EGVAKGVVKDEPETRVAIKTVNEAASMRE 71

Query: 72  RISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSD 127
           RI F  E  V++      + RL GV+S  +     I +     DL S LR  +     + 
Sbjct: 72  RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPAMANNP 130

Query: 128 DTIRFYAAELVL-------ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
                  ++++         + YL+    V+RDL   N M+ E+  + + DF ++
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 185

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 32/171 (18%)

Query: 13  LDFSCLRIVSALGRGAKGVVFL----VKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
           L+   L+++  +G+G  G V L       V      A+K I  D   +            
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV------AVKCIKNDATAQA----------- 232

Query: 69  KYRRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQM 124
                 F  E  V+  + H  L +L GV+  +K   Y + +Y     L   LR +    +
Sbjct: 233 ------FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 286

Query: 125 FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             D  ++F + ++  A+EYL     V+RDL   N+++ E+    + DF L+
Sbjct: 287 GGDCLLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 29/175 (16%)

Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS----KELTNNDNGDKYR 71
           + L +   LG G  G V              +   +           K +   DN  +  
Sbjct: 34  NLLILGKILGEGEFGSVM-------------EGNLKQEDGTSLKVAVKTM-KLDNSSQRE 79

Query: 72  RISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAID-----YCPGRDLHS-LRK---QQ 120
              F  E   +++  HP + RL GV       G         +    DLH+ L     + 
Sbjct: 80  IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139

Query: 121 SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             +     T+  +  ++ L +EYL N   ++RDL   N M++++  + + DF LS
Sbjct: 140 GPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 47.2 bits (113), Expect = 4e-06
 Identities = 36/168 (21%), Positives = 69/168 (41%), Gaps = 21/168 (12%)

Query: 13  LDFSCLRIVSA-LGRGAKGVVF--LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           L    L I    LG G  G V   + +  +     A+KV+         K+ T   + ++
Sbjct: 6   LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL---------KQGTEKADTEE 56

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSD 127
             R   E +++  +++P + RL GV   +      + +   G  LH  L  ++ E     
Sbjct: 57  MMR---EAQIMHQLDNPYIVRLIGVCQAEAL--MLVMEMAGGGPLHKFLVGKREE--IPV 109

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             +     ++ + ++YL     V+RDL   N+++    +  + DF LS
Sbjct: 110 SNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 16/164 (9%)

Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKV-IWRDLIEKKSKELTNNDNGDKYRRIS 74
             L+ +S LG+G  G V L +     ++    V +      K+ +    +   D  R   
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAV------KQLQHSGPDQQRDFQR--- 73

Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI--DYCPGRDLHS-LRKQQSEQMFSDDTIR 131
            E ++L+ +    + + RGV          +  +Y P   L   L++ ++        + 
Sbjct: 74  -EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLL 130

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            Y++++   +EYL +   V+RDL   NI+++   H+ + DF L+
Sbjct: 131 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 28/175 (16%)

Query: 16  SCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
               +   LG+G  G V    L ++  S    A+K++               D       
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-------------KADIIASSDI 69

Query: 73  ISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAID------YCPGRDLHS-LRKQQSEQ 123
             F  E   ++  +HP + +L GV    +  G          +    DLH+ L   +  +
Sbjct: 70  EEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE 129

Query: 124 MFSDDTIR---FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              +  ++    +  ++   +EYL +   ++RDL   N M+ E+  + + DF LS
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 24/167 (14%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE---KKSKELTNNDNGDK 69
           +D S L  V  +G G  G+V                 W +  +   K  +E   ++  + 
Sbjct: 5   IDPSELTFVQEIGSGQFGLVH-------------LGYWLNKDKVAIKTIREGAMSE--ED 49

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDD 128
           +     E  V+  + HP L +L GV      +    ++     L   LR Q+    F+ +
Sbjct: 50  FIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL--FAAE 104

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
           T+     ++   + YL    +++RDL   N ++ EN  I + DF ++
Sbjct: 105 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 151

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 37/181 (20%)

Query: 16  SCLRIVSALGRGAKGVVFL--VKDVESSESF---ALKVIWRDLIEKKSKELTNNDNGDKY 70
             + +   LG GA G VFL    ++   +     A+K +         KE + +      
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---------KEASESA----- 86

Query: 71  RRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFS 126
            R  F  E  +L  ++H  + R  GV +  + +   + +Y    DL+  LR    +    
Sbjct: 87  -RQDFQREAELLTMLQHQHIVRFFGVCTEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLL 144

Query: 127 DDTIRFYAAELVLA------------LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
                     L L             + YL  +  V+RDL   N ++ +   + + DF +
Sbjct: 145 AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGM 204

Query: 175 S 175
           S
Sbjct: 205 S 205

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
           L YLH   I++RD+K  NI++ EN    + DF +S K   
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS-KKGT 190

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 30/170 (17%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE---KKSKELTNNDNGDK 69
           +    L++V  LG G  G V+                +    +   K  K+ + +     
Sbjct: 10  VPRETLKLVERLGAGQFGEVW-------------MGYYNGHTKVAVKSLKQGSMS----- 51

Query: 70  YRRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMF 125
               +F  E  +++ ++H  L RL  V++ +    Y I +Y     L   L+     ++ 
Sbjct: 52  --PDAFLAEANLMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT 107

Query: 126 SDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
            +  +   AA++   + ++     ++RDL+  NI++ +     + DF L+
Sbjct: 108 INKLLDM-AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 6/102 (5%)

Query: 76  EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSDDTIRFY 133
           E +++  +++P + RL GV   +      + +   G  LH  L  ++ E       +   
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQAEAL--MLVMEMAGGGPLHKFLVGKREE--IPVSNVAEL 441

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
             ++ + ++YL     V+R+L   N+++    +  + DF LS
Sbjct: 442 LHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 29/175 (16%)

Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL----TNNDNGDKYR 71
             + ++  LG GA G V+             +     +    S       T  +   +  
Sbjct: 71  KNITLIRGLGHGAFGEVY-------------EGQVSGMPNDPSPLQVAVKTLPEVCSEQD 117

Query: 72  RISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRK-----QQSEQ 123
            + F  E  ++    H  + R  GV          ++   G DL S LR+      Q   
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV---DFDLS 175
           +   D +   A ++    +YL     ++RD+   N ++   G   +    DF ++
Sbjct: 178 LAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 59/142 (41%)

Query: 141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
           + +LH    ++RD+K  NI++ E     + DF L+                         
Sbjct: 146 INFLHENHHIHRDIKSANILLDEAFTAKISDFGLA------------------------- 180

Query: 201 KRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG 260
                                  R             +  ++  VGT  Y+APE + G+ 
Sbjct: 181 -----------------------RASEK------FAQTVMTSRIVGTTAYMAPEALRGE- 210

Query: 261 HDFAV--DWWSLGVVLHEMLYG 280
                  D +S GVVL E++ G
Sbjct: 211 --ITPKSDIYSFGVVLLEIITG 230

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 28/169 (16%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE---KKSKELTNNDNGDK 69
           L    + ++  LG G  GVV                 W+   +   K  KE + +++   
Sbjct: 5   LKREEITLLKELGSGQFGVVK-------------LGKWKGQYDVAVKMIKEGSMSED--- 48

Query: 70  YRRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFS 126
                F  E + +  + HP L +  GV S +  +    +Y     L + LR         
Sbjct: 49  ----EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LE 102

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              +     ++   + +L +   ++RDL   N ++  +  + + DF ++
Sbjct: 103 PSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 29/175 (16%)

Query: 16  SCLRIVSALGRGAKGVVF--LVKDVESSESF---ALKVIWRDLIEKKSKELTNNDNGDKY 70
             + ++  LG GA G V+   V  + +  S    A+K +     E+   +          
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM------- 82

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRK-----QQSEQ 123
                E  ++    H  + R  GV S      + + +   G DL S LR+      Q   
Sbjct: 83  -----EALIISKFNHQNIVRCIGV-SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136

Query: 124 MFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV---DFDLS 175
           +   D +   A ++    +YL     ++RD+   N ++   G   +    DF ++
Sbjct: 137 LAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 28/169 (16%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE---KKSKELTNNDNGDK 69
           +D   L  +  LG G  GVV                 WR   +   K  KE + +     
Sbjct: 21  IDPKDLTFLKELGTGQFGVVK-------------YGKWRGQYDVAIKMIKEGSMS----- 62

Query: 70  YRRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFS 126
                F  E +V+ N+ H  L +L GV +  + +    +Y     L + LR+ +    F 
Sbjct: 63  --EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQ 118

Query: 127 DDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
              +     ++  A+EYL +   ++RDL   N ++ + G + + DF LS
Sbjct: 119 TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 43.7 bits (102), Expect = 7e-05
 Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 44/202 (21%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
           L+    +G G  G VF           A+K+I       +  +L N  +   +  I  E 
Sbjct: 22  LQRCEKIGEGVFGEVFQTIA--DHTPVAIKII-----AIEGPDLVNGSHQKTFEEILPEI 74

Query: 78  RVLRNVE---------HPLLPRLRGV------------------LSTDKFVGYAIDYCPG 110
            + + +                L  V                   ST        D+   
Sbjct: 75  IISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKD 134

Query: 111 RDLH---------SLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIM 160
             L             +Q   ++ S  T +    +L  +L      +   +RDL   N++
Sbjct: 135 DQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVL 194

Query: 161 IQENGHIMLVDFDLSTKLSPKT 182
           +++     L         +  +
Sbjct: 195 LKKTSLKKLHYTLNGKSSTIPS 216

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 35/181 (19%), Positives = 64/181 (35%), Gaps = 35/181 (19%)

Query: 16  SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL----TNNDNGDKYR 71
           S +R +  LG    G V+             K         +  +     T  D  +   
Sbjct: 9   SAVRFMEELGEDRFGKVY-------------KGHLFGPAPGEQTQAVAIKTLKDKAEGPL 55

Query: 72  RISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRKQQSEQMFSD 127
           R  F  E  +   ++HP +  L GV++ D+ +   I  YC   DLH  L  +        
Sbjct: 56  REEFRHEAMLRARLQHPNVVCLLGVVTKDQPL-SMIFSYCSHGDLHEFLVMRSPHSDVGS 114

Query: 128 DTIRF-------------YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
                               A++   +EYL +  +V++DL   N+++ +  ++ + D  L
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174

Query: 175 S 175
            
Sbjct: 175 F 175

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 60/474 (12%), Positives = 124/474 (26%), Gaps = 145/474 (30%)

Query: 24  LGRGAKGVVFLVKDVESSES----FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
           LG G K    +  DV  S         K+ W +L    S E            +   Q++
Sbjct: 159 LGSG-KTW--VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV----------LEMLQKL 205

Query: 80  LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           L  ++     R     +                +HS++ +    + S    + Y   L  
Sbjct: 206 LYQIDPNWTSRSDHSSNIK------------LRIHSIQAELRRLLKS----KPYENCL-- 247

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
                    +V  +++                F+LS K+   T        L+A T + I
Sbjct: 248 ---------LVLLNVQNAKA---------WNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 200 -----------KKRRSFLSKFCSSGISLED-PVHSPRIGP-----------DPPSRSD-- 234
                       + +S L K+       +D P       P           D  +  D  
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYL--DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347

Query: 235 --SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAV---D-----------WWSLGVVLHEML 278
              +  + +     +   + P          +V               W+ +      ++
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407

Query: 279 YGATPFRGSS-----RKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKR-------- 325
                    S      KE+   I     +L  +      L R +++     +        
Sbjct: 408 --VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465

Query: 326 -----------IG-----VEEIKGHEFFKGV----NWELLLKISRPPNIPARFEHENNES 365
                      IG     +E  +    F+ V     +           +  +  H++   
Sbjct: 466 PPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF-----------LEQKIRHDSTAW 514

Query: 366 DGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEVNDEMN-KNRGGEKVNNQRHAC 418
           +  G        ++ +   I       E+   VN  ++   +  E +   ++  
Sbjct: 515 NASGSILNTLQQLKFYKPYICDNDPKYERL--VNAILDFLPKIEENLICSKYTD 566

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 6e-04
 Identities = 50/315 (15%), Positives = 89/315 (28%), Gaps = 107/315 (33%)

Query: 1   MNDVVNDRPIRSLDFSC--L---R---IVSALGRGAKGVVFLVKDVES---SES------ 43
           + +V N +   + + SC  L   R   +   L       + L     +    E       
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309

Query: 44  ------------------FALKVIWRDLIEKKSK-ELTNNDNGDKYRRI---------SF 75
                               L +I   + +  +  +   + N DK   I           
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 76  EQR-------VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--EQMFS 126
           E R       V        +P    +LS        I       ++ L K  S  E+   
Sbjct: 370 EYRKMFDRLSVFP--PSAHIP--TILLSL--IWFDVIKSDVMVVVNKLHK-YSLVEKQPK 422

Query: 127 DDTIRFYAAELVLALE-----YLHNMGIV--YRDLK---PENIMIQEN--------GH-- 166
           + TI   +  L L ++      LH   IV  Y   K    ++++            GH  
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRS-IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481

Query: 167 -------------IMLVDFD-LSTKL-SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCS 211
                        ++ +DF  L  K+    T   +  ++L  NT   +K  + +      
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL--NTLQQLKFYKPY------ 533

Query: 212 SGISLEDPVHSPRIG 226
             I   DP +   + 
Sbjct: 534 --ICDNDPKYERLVN 546

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 38/182 (20%)

Query: 16  SCLRIVSALGRGAKGVVFL--VKDVESSESF---ALKVIWRDLIEKKSKELTNNDNGDKY 70
             + +   LG GA G VFL    ++  ++     A+K +         K+ T        
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---------KDPTLAA----- 60

Query: 71  RRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHS-LRK-------- 118
            R  F  E  +L N++H  + +  GV      +   + +Y    DL+  LR         
Sbjct: 61  -RKDFQREAELLTNLQHEHIVKFYGVCGDGDPL-IMVFEYMKHGDLNKFLRAHGPDAMIL 118

Query: 119 -----QQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD 173
                +Q++       +   A+++   + YL +   V+RDL   N ++  N  + + DF 
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG 178

Query: 174 LS 175
           +S
Sbjct: 179 MS 180

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 28/179 (15%), Positives = 59/179 (32%), Gaps = 31/179 (17%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTN-----NDNG 67
           +    L    +LG+G    +F             K + R++ +      T       D  
Sbjct: 5   IRNEDLIFNESLGQGTFTKIF-------------KGVRREVGDYGQLHETEVLLKVLDKA 51

Query: 68  DKYRRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQM 124
            +    SF     ++  + H  L    GV           ++     L + L+K ++   
Sbjct: 52  HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC-- 109

Query: 125 FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ--------ENGHIMLVDFDLS 175
            +       A +L  A+ +L    +++ ++  +NI++             I L D  +S
Sbjct: 110 INILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 26/116 (22%), Positives = 34/116 (29%), Gaps = 22/116 (18%)

Query: 252 APE-IIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPDLV 304
            PE I   K  + A D WS G  L E+   G  P      +           L  P    
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK--- 241

Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEH 360
                L NLI   ++ +P  R     I             L  +  P  +P    H
Sbjct: 242 --AAELANLINNCMDYEPDHRPSFRAII----------RDLNSLFTPDLVPRGSHH 285

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	426
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.96
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.94
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.88
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.82
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.51
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.36
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.26
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.16
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.99
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.83
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.8
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.62
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.47
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.41
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.4
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.32
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.03
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.89
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.77
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.66
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.66
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.61
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.55
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.53
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.52
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.42
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.41
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.37
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.93
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.7
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.47
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.2
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	87.88
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	84.92

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=6.4e-72  Score=530.73  Aligned_cols=275  Identities=34%  Similarity=0.605  Sum_probs=245.4

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ....++|++++.||+|+||+||+|+++.+++.||||++.+..+...          ...+.+.+|+++|+.|+|||||++
T Consensus        28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~----------~~~~~~~~E~~il~~l~HpnIv~l   97 (311)
T 4aw0_A           28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRLDHPFFVKL   97 (311)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             CCCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCH----------HHHHHHHHHHHHHHhCCCCCCCeE
Confidence            3556789999999999999999999999999999999988765433          235678999999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +++|++++.+|||||||+||+|.++++...  .+++..++.|++||+.||+|||++|||||||||+||||+.+|++||+|
T Consensus        98 ~~~~~~~~~~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~D  175 (311)
T 4aw0_A           98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD  175 (311)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECC
T ss_pred             EEEEEeCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEE
Confidence            999999999999999999999999987654  499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+.+....                                                      ......++|||+.||
T Consensus       176 FGla~~~~~~~------------------------------------------------------~~~~~~~~~GTp~Ym  201 (311)
T 4aw0_A          176 FGTAKVLSPES------------------------------------------------------KQARANSFVGTAQYV  201 (311)
T ss_dssp             CTTCEECCTTT------------------------------------------------------TCCCBCCCCSCGGGC
T ss_pred             cCCceecCCCC------------------------------------------------------CcccccCcccCcccC
Confidence            99998764221                                                      122456789999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |||++.+..|+.++|||||||++|+|++|++||.+.+..+.+.+|+.....+ ...++++++||.+||++||++|||++|
T Consensus       202 APEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e  281 (311)
T 4aw0_A          202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEE  281 (311)
T ss_dssp             CHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGG
T ss_pred             CHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHH
Confidence            9999999999999999999999999999999999999999999998665444 356889999999999999999999988


Q ss_pred             ------HhcCCCcCCCChhhhhhccCCCC
Q 014344          331 ------IKGHEFFKGVNWELLLKISRPPN  353 (426)
Q Consensus       331 ------il~hp~f~~~~~~~~~~~~~~~~  353 (426)
                            |++||||++++|+.+.+. .||.
T Consensus       282 ~~~~~~i~~Hp~F~~idw~~l~~~-~pP~  309 (311)
T 4aw0_A          282 MEGYGPLKAHPFFESVTWENLHQQ-TPPK  309 (311)
T ss_dssp             GTCHHHHHTSGGGTTCCCTTGGGS-CCCC
T ss_pred             HcCCHHHHCCCCcCCCCHHHhcCC-CCCC
Confidence                  589999999999998664 3444

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.2e-69  Score=514.76  Aligned_cols=276  Identities=39%  Similarity=0.729  Sum_probs=234.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ...+.++|++++.||+|+||+||+|++.   .+++.||||++.+......           ...++.+|+.+|++++|||
T Consensus        19 ~~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-----------~~~~~~~E~~il~~l~Hpn   87 (304)
T 3ubd_A           19 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-----------DRVRTKMERDILVEVNHPF   87 (304)
T ss_dssp             CCCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-----------ECC------CCCCCCCCTT
T ss_pred             ccCCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-----------HHHHHHHHHHHHHHCCCCC
Confidence            3456789999999999999999999984   4678999999976543221           1235777999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ||+++++|++++.+|+|||||+||+|.+++....  .+++..++.|+.||+.||+|||++|||||||||+|||++.+|++
T Consensus        88 Iv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~v  165 (304)
T 3ubd_A           88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI  165 (304)
T ss_dssp             EECEEEEEEETTEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCE
T ss_pred             CCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCE
Confidence            9999999999999999999999999999987654  49999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||+|+.....                                                        .....+++||
T Consensus       166 Kl~DFGla~~~~~~--------------------------------------------------------~~~~~~~~GT  189 (304)
T 3ubd_A          166 KLTDFGLSKESIDH--------------------------------------------------------EKKAYSFCGT  189 (304)
T ss_dssp             EEESSEEEEC-------------------------------------------------------------CCCCSCCCC
T ss_pred             EecccccceeccCC--------------------------------------------------------CccccccccC
Confidence            99999999865321                                                        1234567899


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      +.|||||++.+..|+.++|||||||++|||++|++||.+.+..+++.++......+ ...++++++||.+||++||++||
T Consensus       190 ~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  269 (304)
T 3ubd_A          190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL  269 (304)
T ss_dssp             GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             cccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCC
Confidence            99999999999999999999999999999999999999999999999888665444 35689999999999999999999


Q ss_pred             C-----hHHHhcCCCcCCCChhhhhhcc-CCCCCC
Q 014344          327 G-----VEEIKGHEFFKGVNWELLLKIS-RPPNIP  355 (426)
Q Consensus       327 s-----~~eil~hp~f~~~~~~~~~~~~-~~~~~~  355 (426)
                      |     ++||++||||++++|+.+.... .||++|
T Consensus       270 ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          270 GAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             TCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             CCCcCCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence            8     4799999999999999987643 455544

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.6e-68  Score=515.57  Aligned_cols=259  Identities=27%  Similarity=0.446  Sum_probs=227.3

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|+++++||+|+||+||+|+++.+|+.||||++.+.....           ...+++.+|+.+|++|+|||||++++
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-----------~~~~~~~~E~~il~~l~HpnIV~~~~   90 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-----------KEREESRREVAVLANMKHPNIVQYRE   90 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-----------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-----------HHHHHHHHHHHHHHHCCCCCCCcEEE
Confidence            4679999999999999999999999999999999997653322           24567889999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      +|++++.+|||||||+||+|.+++.......+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||
T Consensus        91 ~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFG  170 (350)
T 4b9d_A           91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFG  170 (350)
T ss_dssp             EEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTT
T ss_pred             EEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccc
Confidence            99999999999999999999999987766678999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      +|+.+...                                                        ....++.+||+.||||
T Consensus       171 la~~~~~~--------------------------------------------------------~~~~~~~~GT~~YmAP  194 (350)
T 4b9d_A          171 IARVLNST--------------------------------------------------------VELARACIGTPYYLSP  194 (350)
T ss_dssp             EESCCCHH--------------------------------------------------------HHHHHHHHSCCTTCCH
T ss_pred             cceeecCC--------------------------------------------------------cccccccCCCccccCH
Confidence            99875311                                                        1123466899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      |++.+..|+.++|||||||++|||++|++||.+.+..+.+.+++...  +.....+.++++||.+||++||++|||++||
T Consensus       195 E~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~  274 (350)
T 4b9d_A          195 EICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI  274 (350)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            99999999999999999999999999999999999999998887543  3344678999999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      |+||||+.
T Consensus       275 l~hp~~~~  282 (350)
T 4b9d_A          275 LEKGFIAK  282 (350)
T ss_dssp             HTSHHHHT
T ss_pred             hcCHHhhc
Confidence            99999974

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=5.8e-67  Score=503.87  Aligned_cols=252  Identities=24%  Similarity=0.398  Sum_probs=225.6

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|+++++||+|+||+||+|+++.+|+.||||++.+...             ...+.+.+|+.+|+.++|||||+++++|
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-------------~~~~~~~~Ei~il~~l~HpnIV~l~~~~  140 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-------------QRRELLFNEVVIMRDYQHENVVEMYNSY  140 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-------------SSGGGGHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-------------hHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            569999999999999999999999999999999965321             1234678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ++++.+|||||||+||+|.+++..   ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|
T Consensus       141 ~~~~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla  217 (346)
T 4fih_A          141 LVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC  217 (346)
T ss_dssp             EETTEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCc
Confidence            999999999999999999998865   34999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      +.+...                                                        .....+++||+.|||||+
T Consensus       218 ~~~~~~--------------------------------------------------------~~~~~~~~GTp~YmAPEv  241 (346)
T 4fih_A          218 AQVSKE--------------------------------------------------------VPRRKSLVGTPYWMAPEL  241 (346)
T ss_dssp             EECCSS--------------------------------------------------------SCCBCCCCSCGGGCCHHH
T ss_pred             eecCCC--------------------------------------------------------CCcccccccCcCcCCHHH
Confidence            876421                                                        123456789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..|+.++|||||||++|||++|++||.+.+..+.+..+....+.    ....++++++||.+||++||++|||++||
T Consensus       242 l~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~  321 (346)
T 4fih_A          242 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL  321 (346)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             HCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            99999999999999999999999999999999999888888654322    23468899999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      |+||||+.
T Consensus       322 l~Hp~~~~  329 (346)
T 4fih_A          322 LKHPFLAK  329 (346)
T ss_dssp             TTCGGGGG
T ss_pred             hcCHhhcC
Confidence            99999974

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=6.9e-67  Score=489.39  Aligned_cols=255  Identities=32%  Similarity=0.475  Sum_probs=212.6

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|++++.||+|+||+||+|+++.+|+.||||++.+......          ....++.+|+.+|+.++|||||++++
T Consensus        11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~----------~~~~~~~~Ei~il~~l~HpnIv~~~~   80 (275)
T 3hyh_A           11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS----------DMQGRIEREISYLRLLRHPHIIKLYD   80 (275)
T ss_dssp             ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC----------------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCH----------HHHHHHHHHHHHHHHCCCCCCCeEEE
Confidence            46799999999999999999999999999999999976543322          23567899999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      +|++++.+|+||||| +|+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||
T Consensus        81 ~~~~~~~~~ivmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFG  157 (275)
T 3hyh_A           81 VIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG  157 (275)
T ss_dssp             EEECSSEEEEEEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred             EEEECCEEEEEEeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecC
Confidence            999999999999999 68999988764  459999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      +|+.....                                                         ....+.+||+.||||
T Consensus       158 la~~~~~~---------------------------------------------------------~~~~~~~GT~~Y~AP  180 (275)
T 3hyh_A          158 LSNIMTDG---------------------------------------------------------NFLKTSCGSPNYAAP  180 (275)
T ss_dssp             CC------------------------------------------------------------------------CTTSCH
T ss_pred             CCeecCCC---------------------------------------------------------CccCCeeECcccCCh
Confidence            99765321                                                         123456899999999


Q ss_pred             hhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          254 EIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       254 E~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      |++.+..| +.++|||||||++|+|++|++||.+.+..+.+.++......+ ...++.+++||.+||++||++|||++|+
T Consensus       181 E~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~ei  260 (275)
T 3hyh_A          181 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEI  260 (275)
T ss_dssp             HHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            99999886 589999999999999999999999999988888887665444 3468899999999999999999999999


Q ss_pred             hcCCCcC
Q 014344          332 KGHEFFK  338 (426)
Q Consensus       332 l~hp~f~  338 (426)
                      ++||||+
T Consensus       261 l~hpw~k  267 (275)
T 3hyh_A          261 MQDDWFK  267 (275)
T ss_dssp             HHCHHHH
T ss_pred             HcCcccc
Confidence            9999996

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.5e-65  Score=505.72  Aligned_cols=252  Identities=24%  Similarity=0.403  Sum_probs=226.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|+++++||+|+||+||+|+++.+|+.||||++.+..             ....+.+.+|+.+|+.|+|||||+++++|
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-------------~~~~~~~~~Ei~il~~l~HpnIV~l~~~~  217 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-------------QQRRELLFNEVVIMRDYQHENVVEMYNSY  217 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT-------------CSSGGGHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc-------------hhHHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            56999999999999999999999999999999995432             12245688899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+++.+|||||||+||+|.+++..   ..+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|
T Consensus       218 ~~~~~~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla  294 (423)
T 4fie_A          218 LVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC  294 (423)
T ss_dssp             EETTEEEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTC
T ss_pred             EECCEEEEEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccc
Confidence            999999999999999999999864   34999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      +.+...                                                        .....+++||+.|||||+
T Consensus       295 ~~~~~~--------------------------------------------------------~~~~~~~~GTp~YmAPEv  318 (423)
T 4fie_A          295 AQVSKE--------------------------------------------------------VPRRKSLVGTPYWMAPEL  318 (423)
T ss_dssp             EECCSS--------------------------------------------------------CCCBCCCEECTTTCCHHH
T ss_pred             eECCCC--------------------------------------------------------CccccccccCcCcCCHHH
Confidence            876421                                                        123456799999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----CCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..|+.++|||||||++|||++|++||.+.+..+.+..+....+    .....+..+++||.+||++||++|||++||
T Consensus       319 l~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~el  398 (423)
T 4fie_A          319 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAEL  398 (423)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             HCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            9999999999999999999999999999999999988888865432    233568899999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      |+||||+.
T Consensus       399 l~Hp~~~~  406 (423)
T 4fie_A          399 LKHPFLAK  406 (423)
T ss_dssp             TTCGGGGG
T ss_pred             hcCHHhcC
Confidence            99999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.1e-64  Score=521.31  Aligned_cols=279  Identities=32%  Similarity=0.586  Sum_probs=237.5

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+.+++|+++++||+|+||+||+|+++.+|+.||||++.+..+....       ..........++.+++.++|||||++
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~-------~~~~~~~E~~~l~ll~~~~HP~IV~l  257 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ-------GETLALNERIMLSLVSTGDCPFIVCM  257 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTT-------CHHHHHHHHHHHHHHSSSCCTTBCCE
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhh-------hHHHHHHHHHHHHHHhhCCCCCEeEE
Confidence            57789999999999999999999999999999999999887765432       11122233344666777899999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +++|++++.+|||||||+||+|.+++....  .|++..+++|++||+.||+|||++|||||||||+||||+.+|++||+|
T Consensus       258 ~~~f~~~~~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~D  335 (689)
T 3v5w_A          258 SYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISD  335 (689)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEEECCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecc
Confidence            999999999999999999999999987653  499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+.+..                                                          ....++||||.||
T Consensus       336 FGlA~~~~~----------------------------------------------------------~~~~t~~GTp~Ym  357 (689)
T 3v5w_A          336 LGLACDFSK----------------------------------------------------------KKPHASVGTHGYM  357 (689)
T ss_dssp             CTTCEECSS----------------------------------------------------------CCCCSCCSCGGGC
T ss_pred             cceeeecCC----------------------------------------------------------CCCCCccCCcCcc
Confidence            999986532                                                          1345678999999


Q ss_pred             cchhhc-CCCCChhhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~---~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++. +..|+.++|||||||++|||++|++||.+.   +..+.+..+....... ...++++++||.+||++||.+|+
T Consensus       358 APEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl  437 (689)
T 3v5w_A          358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL  437 (689)
T ss_dssp             CHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCT
T ss_pred             CHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCC
Confidence            999996 568999999999999999999999999764   3345556666554433 45689999999999999999999


Q ss_pred             C-----hHHHhcCCCcCCCChhhhhh-ccCCCCCCCC
Q 014344          327 G-----VEEIKGHEFFKGVNWELLLK-ISRPPNIPAR  357 (426)
Q Consensus       327 s-----~~eil~hp~f~~~~~~~~~~-~~~~~~~~~~  357 (426)
                      +     ++||++||||++++|+.+.. ...||.+|..
T Consensus       438 ~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~  474 (689)
T 3v5w_A          438 GCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPR  474 (689)
T ss_dssp             TCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCT
T ss_pred             CCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccCCC
Confidence            8     79999999999999999875 4456666643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.7e-64  Score=477.17  Aligned_cols=252  Identities=21%  Similarity=0.370  Sum_probs=213.8

Q ss_pred             CCc-EEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           16 SCL-RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        16 ~~y-~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .+| ++.++||+|+||+||+|+++.+++.||+|++.+.....           ...+++.+|+.+|++|+|||||+++++
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-----------~~~~~~~~E~~il~~l~HpnIV~~~~~   93 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-----------SERQRFKEEAEMLKGLQHPNIVRFYDS   93 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-----------HHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-----------HHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            344 78889999999999999999999999999996543222           235678999999999999999999999


Q ss_pred             eec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeeecc-CCcE
Q 014344           95 LST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQE-NGHI  167 (426)
Q Consensus        95 ~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiLl~~-~g~i  167 (426)
                      |++    +..+|||||||+||+|.+++....  .+++..++.|+.||+.||+|||++|  ||||||||+||||+. +|.+
T Consensus        94 ~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~v  171 (290)
T 3fpq_A           94 WESTVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSV  171 (290)
T ss_dssp             EEEEETTEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCE
T ss_pred             EeeccCCCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCE
Confidence            965    457899999999999999987653  4999999999999999999999998  999999999999984 7999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||+|+....                                                          ....+.+||
T Consensus       172 Kl~DFGla~~~~~----------------------------------------------------------~~~~~~~GT  193 (290)
T 3fpq_A          172 KIGDLGLATLKRA----------------------------------------------------------SFAKAVIGT  193 (290)
T ss_dssp             EECCTTGGGGCCT----------------------------------------------------------TSBEESCSS
T ss_pred             EEEeCcCCEeCCC----------------------------------------------------------CccCCcccC
Confidence            9999999975321                                                          134567899


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhcCCC--C-CCCCCHHHHHHHHHHhccCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET-FYRILCRPP--D-LVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~--~-~~~~~~~~~~li~~~L~~dP~  323 (426)
                      |.|||||++.+ .|+.++|||||||++|||++|++||.+.+.... +..+.....  . ....++++++||.+||++||+
T Consensus       194 p~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  272 (290)
T 3fpq_A          194 PEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             CCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             ccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChh
Confidence            99999999876 599999999999999999999999987655444 444443321  1 123567899999999999999


Q ss_pred             CCCChHHHhcCCCcCC
Q 014344          324 KRIGVEEIKGHEFFKG  339 (426)
Q Consensus       324 ~R~s~~eil~hp~f~~  339 (426)
                      +|||++|+|+||||++
T Consensus       273 ~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          273 ERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             GSCCHHHHHTSGGGC-
T ss_pred             HCcCHHHHhcCccccC
Confidence            9999999999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.5e-65  Score=488.65  Aligned_cols=255  Identities=25%  Similarity=0.367  Sum_probs=219.7

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ..+.|++.++||+|+||+||+|+++.+|+.||||++.++..                  ..+|+.+|+.|+|||||++++
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------------------~~~E~~il~~l~HpnIV~l~~  117 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------------------RVEELVACAGLSSPRIVPLYG  117 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------------------CTHHHHTTTTCCCTTBCCEEE
T ss_pred             chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------------------HHHHHHHHHhCCCCCCCcEEE
Confidence            45679999999999999999999999999999999965321                  124999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-cEEEecc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-HIMLVDF  172 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-~ikL~DF  172 (426)
                      +|++++.+|||||||+||+|.++++...  .+++..++.|+.||+.||+|||++|||||||||+||||+.+| ++||+||
T Consensus       118 ~~~~~~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DF  195 (336)
T 4g3f_A          118 AVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDF  195 (336)
T ss_dssp             EEEETTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCC
T ss_pred             EEEECCEEEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeC
Confidence            9999999999999999999999987654  499999999999999999999999999999999999999998 6999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.+......                                                   .......+++||+.|||
T Consensus       196 Gla~~~~~~~~~---------------------------------------------------~~~~~~~~~~GT~~YmA  224 (336)
T 4g3f_A          196 GHALCLQPDGLG---------------------------------------------------KSLLTGDYIPGTETHMA  224 (336)
T ss_dssp             TTCEEC---------------------------------------------------------------CCCCCCGGGCC
T ss_pred             CCCeEccCCCcc---------------------------------------------------cceecCCccccCccccC
Confidence            999876432100                                                   01112345789999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      ||++.+..|+.++|||||||++|||++|++||.+.+..+.+.++...++.    ....++.+.+||.+||++||.+|||+
T Consensus       225 PE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa  304 (336)
T 4g3f_A          225 PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASA  304 (336)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCH
Confidence            99999999999999999999999999999999998877777777765432    34568899999999999999999999


Q ss_pred             HHH-------------hcCCCcCC
Q 014344          329 EEI-------------KGHEFFKG  339 (426)
Q Consensus       329 ~ei-------------l~hp~f~~  339 (426)
                      .||             |+|||++.
T Consensus       305 ~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          305 MELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             HHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             HHHHHHHHHHHhhhhhccCCCcCC
Confidence            997             57888865

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2e-62  Score=483.70  Aligned_cols=261  Identities=25%  Similarity=0.403  Sum_probs=220.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+...           .....+++.+|+.+|+.|+|||||++++++
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-----------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~  122 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-----------VVTNAKRTLRELKILKHFKHDNIIAIKDIL  122 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-----------SHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-----------chHHHHHHHHHHHHHHhcCCCCcceEeeee
Confidence            479999999999999999999999999999999954321           122456788999999999999999999987


Q ss_pred             ec------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           96 ST------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        96 ~~------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ..      .+.+|||||||. |+|.+++...  +.+++..++.|++||+.||+|||++|||||||||+|||++.+|.+||
T Consensus       123 ~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki  199 (398)
T 4b99_A          123 RPTVPYGEFKSVYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI  199 (398)
T ss_dssp             CCSSCTTTCCCEEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEE
T ss_pred             ecccccccCCEEEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEE
Confidence            54      468999999996 7798887653  45999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|+.+.....                                                    .......+++||+.
T Consensus       200 ~DFGla~~~~~~~~----------------------------------------------------~~~~~~~~~~GT~~  227 (398)
T 4b99_A          200 GDFGMARGLCTSPA----------------------------------------------------EHQYFMTEYVATRW  227 (398)
T ss_dssp             CCCTTCBCC-----------------------------------------------------------CCCCCSSCCCCT
T ss_pred             eecceeeecccCcc----------------------------------------------------ccccccccceeChH
Confidence            99999987642110                                                    11223456789999


Q ss_pred             CccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC---------------------C--
Q 014344          250 YVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP---------------------D--  302 (426)
Q Consensus       250 y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~---------------------~--  302 (426)
                      |||||++.+. .|+.++||||+||++|||++|++||.+.+..+++..|+.   .++                     .  
T Consensus       228 Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  307 (398)
T 4b99_A          228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQP  307 (398)
T ss_dssp             TCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCC
T ss_pred             hcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCC
Confidence            9999999875 569999999999999999999999999998888877642   111                     0  


Q ss_pred             ------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          303 ------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       303 ------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                            ....++++.|||.+||++||.+|||++|+|+||||+....
T Consensus       308 ~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          308 VPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             CCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred             CCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence                  1234778999999999999999999999999999987643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=8.6e-63  Score=468.94  Aligned_cols=270  Identities=23%  Similarity=0.375  Sum_probs=201.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|+++.+|+.||||++....            .....+++.+|+.+|++|+|||||+++++|
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~------------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~   72 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN------------RELAREKVMREVKALAKLEHPGIVRYFNAW   72 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS------------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC------------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            57999999999999999999999999999999985431            122346788999999999999999999999


Q ss_pred             ecCC------------eEEEEEeccCCCChHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec
Q 014344           96 STDK------------FVGYAIDYCPGRDLHSLRKQQSE-QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ  162 (426)
Q Consensus        96 ~~~~------------~~~lV~Ey~~gg~L~~l~~~~~~-~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~  162 (426)
                      .+.+            ++|+|||||+||+|.+++..... ...+...++.|+.||+.||+|||++|||||||||+||||+
T Consensus        73 ~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~  152 (299)
T 4g31_A           73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT  152 (299)
T ss_dssp             EEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             EecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEEC
Confidence            6544            47999999999999999875432 2245677899999999999999999999999999999999


Q ss_pred             cCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          163 ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       163 ~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                      .+|.+||+|||+|+.+.........                                            ..........+
T Consensus       153 ~~~~vKl~DFGla~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~  188 (299)
T 4g31_A          153 MDDVVKVGDFGLVTAMDQDEEEQTV--------------------------------------------LTPMPAYARHT  188 (299)
T ss_dssp             TTCCEEECCCCCC-------------------------------------------------------------------
T ss_pred             CCCcEEEccCccceecCCCcccccc--------------------------------------------ccccccccccC
Confidence            9999999999999877532211000                                            00001123445


Q ss_pred             ccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcC--CCCCCCCCHHHHHHHHHHhc
Q 014344          243 SFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILCR--PPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~--~~~~~~~~~~~~~li~~~L~  319 (426)
                      +.+||+.|||||++.+..|+.++|||||||++|||++   ||...... .....+...  ++.+...++.+.+||.+||+
T Consensus       189 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~  265 (299)
T 4g31_A          189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLS  265 (299)
T ss_dssp             ---CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTC
T ss_pred             CcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcC
Confidence            6789999999999999999999999999999999995   88654332 223333222  12222335667899999999


Q ss_pred             cCCCCCCChHHHhcCCCcCCCChhh
Q 014344          320 KDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       320 ~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                      +||++|||+.|||+||||++++|..
T Consensus       266 ~dP~~Rps~~eil~h~~~~~~~~p~  290 (299)
T 4g31_A          266 PSPMERPEAINIIENAVFEDLDFPG  290 (299)
T ss_dssp             SSGGGSCCHHHHHTSGGGCCC----
T ss_pred             CChhHCcCHHHHhcCHhhCCCCCCC
Confidence            9999999999999999999998843

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=7.5e-61  Score=467.43  Aligned_cols=278  Identities=24%  Similarity=0.344  Sum_probs=209.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCccee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRL   91 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l   91 (426)
                      ++|+++++||+|+||+||+|+++   .+++.||||++.+..               ...++.+|+++|+.+ +||||+++
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---------------~~~~~~~E~~~l~~~~~h~nIv~l   85 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---------------HPIRIAAELQCLTVAGGQDNVMGV   85 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---------------CHHHHHHHHHHHHHTCSBTTBCCC
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---------------CHHHHHHHHHHHHHhcCCCCCceE
Confidence            46999999999999999999975   467899999984321               234677899999998 59999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-CcEEEe
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-GHIMLV  170 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-g~ikL~  170 (426)
                      +++|++++.+|+|||||+||+|.+++.     .+++..++.|+.||+.||+|||++|||||||||+|||++.+ +++||+
T Consensus        86 ~~~~~~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~  160 (361)
T 4f9c_A           86 KYCFRKNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALV  160 (361)
T ss_dssp             SEEEEETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEEC
T ss_pred             EEEEEECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEEC
Confidence            999999999999999999999999873     39999999999999999999999999999999999999876 899999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+............                     ..+.......       ................+.+||+.|
T Consensus       161 DFGla~~~~~~~~~~~~~---------------------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~GT~~Y  212 (361)
T 4f9c_A          161 DFGLAQGTHDTKIELLKF---------------------VQSEAQQERC-------SQNKCSICLSRRQQVAPRAGTPGF  212 (361)
T ss_dssp             CCTTCEECTTCSCGGGGG---------------------C---------------------------------CCCCGGG
T ss_pred             cCCCCcccCCcccccccc---------------------cccccccccc-------ccccccccccccccccccccCccc
Confidence            999998765332110000                     0000000000       000000001112345677899999


Q ss_pred             ccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhc------------------------------
Q 014344          251 VAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRILC------------------------------  298 (426)
Q Consensus       251 ~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~------------------------------  298 (426)
                      ||||++.+. .|+.++||||+||++|||++|++||... +..+++.+|..                              
T Consensus       213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~  292 (361)
T 4f9c_A          213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLR  292 (361)
T ss_dssp             CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHH
T ss_pred             cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhh
Confidence            999999875 5899999999999999999999999654 44444433321                              


Q ss_pred             -------------------------CCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          299 -------------------------RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       299 -------------------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                                               ........+++++|||.+||++||++|+|++|+|+||||++++
T Consensus       293 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          293 KLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             HHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             HHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence                                     0011234578899999999999999999999999999999764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.3e-60  Score=490.64  Aligned_cols=259  Identities=28%  Similarity=0.437  Sum_probs=230.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|+++.+|+.||||++.+...             ...+.+.+|+.+|+.|+|||||+++++
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-------------~~~~~~~~Ei~il~~l~hpnIv~l~~~  222 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-------------SDKETVRKEIQTMSVLRHPTLVNLHDA  222 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-------------HHHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-------------hhHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            4689999999999999999999999999999999855322             223567889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC--CcEEEecc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN--GHIMLVDF  172 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~--g~ikL~DF  172 (426)
                      |+++..+|||||||+||+|.+++.... ..+++..++.|++||+.||+|||++||+||||||+|||++.+  |++||+||
T Consensus       223 ~~~~~~~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DF  301 (573)
T 3uto_A          223 FEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF  301 (573)
T ss_dssp             EECSSEEEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred             EEECCEEEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeec
Confidence            999999999999999999999876433 459999999999999999999999999999999999999854  89999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.+...                                                         ....+.+||+.|||
T Consensus       302 G~a~~~~~~---------------------------------------------------------~~~~~~~GT~~y~A  324 (573)
T 3uto_A          302 GLTAHLDPK---------------------------------------------------------QSVKVTTGTAEFAA  324 (573)
T ss_dssp             SSCEECCTT---------------------------------------------------------SEEEEECSSGGGCC
T ss_pred             cceeEccCC---------------------------------------------------------CceeeeEECccccC
Confidence            999876421                                                         23446689999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..|+.++|||||||++|+|++|++||.+.+..+++.++......+     ...+..+++||.+||++||.+|||
T Consensus       325 PEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t  404 (573)
T 3uto_A          325 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT  404 (573)
T ss_dssp             HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC
Confidence            999999999999999999999999999999999999999999887654332     356889999999999999999999


Q ss_pred             hHHHhcCCCcCCCChhh
Q 014344          328 VEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       328 ~~eil~hp~f~~~~~~~  344 (426)
                      ++|+|+||||+..+|..
T Consensus       405 ~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          405 IHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             HHHHHHSTTTSCCCCTT
T ss_pred             HHHHhcCcCcCCCCCCC
Confidence            99999999999887754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.2e-60  Score=450.69  Aligned_cols=259  Identities=21%  Similarity=0.306  Sum_probs=220.8

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      .+.++.++|.+.++||+|+||+||+|++.     .++..||||++...             .....+.+.+|+++|++|+
T Consensus         7 ~~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-------------~~~~~~~f~~E~~il~~l~   73 (299)
T 4asz_A            7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-------------SDNARKDFHREAELLTNLQ   73 (299)
T ss_dssp             CCBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-------------CHHHHHHHHHHHHHHTTCC
T ss_pred             hcccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-------------ChHHHHHHHHHHHHHHhCC
Confidence            45678899999999999999999999875     46788999998532             1234567899999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc-----------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-----------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRD  153 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~-----------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrD  153 (426)
                      |||||++++++.+++.+|+|||||+||+|.++++...           ...+++..+..++.||+.||+|||+++|||||
T Consensus        74 HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD  153 (299)
T 4asz_A           74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRD  153 (299)
T ss_dssp             CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCc
Confidence            9999999999999999999999999999999987642           34699999999999999999999999999999


Q ss_pred             CCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 014344          154 LKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS  233 (426)
Q Consensus       154 lKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (426)
                      |||+||||+.++.+||+|||+|+......                                                   
T Consensus       154 lKp~NILl~~~~~~Ki~DFGla~~~~~~~---------------------------------------------------  182 (299)
T 4asz_A          154 LATRNCLVGENLLVKIGDFGMSRDVYSTD---------------------------------------------------  182 (299)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGG---------------------------------------------------
T ss_pred             cCHhhEEECCCCcEEECCcccceecCCCC---------------------------------------------------
Confidence            99999999999999999999998653211                                                   


Q ss_pred             CCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHH
Q 014344          234 DSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPL  310 (426)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~  310 (426)
                         ........+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+.+..+...  ++.+..+|..+
T Consensus       183 ---~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~  259 (299)
T 4asz_A          183 ---YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEV  259 (299)
T ss_dssp             ---CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHH
T ss_pred             ---ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHH
Confidence               0112234569999999999999999999999999999999998 99999999998888877643  33445678999


Q ss_pred             HHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          311 RNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       311 ~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      .+||.+||+.||++|||+++|+  +|+
T Consensus       260 ~~li~~cl~~dP~~RPs~~~i~--~~L  284 (299)
T 4asz_A          260 YELMLGCWQREPHMRKNIKGIH--TLL  284 (299)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHH--HHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHH--HHH
Confidence            9999999999999999999994  455

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.5e-59  Score=452.01  Aligned_cols=262  Identities=19%  Similarity=0.287  Sum_probs=217.2

Q ss_pred             CCCCCCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHH
Q 014344            6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL   80 (426)
Q Consensus         6 ~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il   80 (426)
                      ++.....++.++|.+.++||+|+||+||+|+..     .+++.||||++...             .....+.+.+|+++|
T Consensus        31 ~~~~~~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-------------~~~~~~~f~~E~~il   97 (329)
T 4aoj_A           31 SDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-------------SESARQDFQREAELL   97 (329)
T ss_dssp             --CCSCBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-------------SHHHHHHHHHHHHHH
T ss_pred             chhhhcccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-------------CHHHHHHHHHHHHHH
Confidence            344456678889999999999999999999864     46889999998432             123456799999999


Q ss_pred             HhcCCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc-------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-------------EQMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        81 ~~l~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~-------------~~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      ++|+|||||++++++.+++.+|||||||+||+|.++++...             ...+++..+..|+.||+.||+|||++
T Consensus        98 ~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~  177 (329)
T 4aoj_A           98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL  177 (329)
T ss_dssp             TTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999987542             24599999999999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      +||||||||+||||+.++.+||+|||+|+.+....                                             
T Consensus       178 ~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~---------------------------------------------  212 (329)
T 4aoj_A          178 HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD---------------------------------------------  212 (329)
T ss_dssp             TCCCSCCCGGGEEEETTTEEEECCCC------------------------------------------------------
T ss_pred             CeecccccHhhEEECCCCcEEEcccccceeccCCC---------------------------------------------
Confidence            99999999999999999999999999998653211                                             


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCC
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLV  304 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~  304 (426)
                               ........+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+.+..+...  ++.+.
T Consensus       213 ---------~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~  283 (329)
T 4aoj_A          213 ---------YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR  283 (329)
T ss_dssp             ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCT
T ss_pred             ---------cceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence                     0112334579999999999999999999999999999999998 99999999988888777643  34445


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+++.+.+||.+||+.||++|||++||+.+
T Consensus       284 ~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          284 ACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             TCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             cccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            678999999999999999999999999864

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-59  Score=447.47  Aligned_cols=255  Identities=22%  Similarity=0.336  Sum_probs=208.9

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .|+++.+++++.++||+|+||+||+|+..   ..||||++....           ......+.+.+|+.+|++++|||||
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-----------~~~~~~~~f~~E~~il~~l~HpNIV   95 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-----------PTPEQFQAFRNEVAVLRKTRHVNIL   95 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-----------CCHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-----------CCHHHHHHHHHHHHHHHhCCCCCEe
Confidence            46889999999999999999999999854   359999984321           1233567899999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++. ++.+|||||||+||+|.+++.... ..+++..+..|+.||+.||+|||++|||||||||+||||+.++.+||
T Consensus        96 ~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki  173 (307)
T 3omv_A           96 LFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKI  173 (307)
T ss_dssp             CEEEEEC-SSSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEE
T ss_pred             eEEEEEE-CCeEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEE
Confidence            9999875 456899999999999999987543 45999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|+......                                                      ......+.+||+.
T Consensus       174 ~DFGla~~~~~~~------------------------------------------------------~~~~~~~~~GT~~  199 (307)
T 3omv_A          174 GDFGLATVKSRWS------------------------------------------------------GSQQVEQPTGSVL  199 (307)
T ss_dssp             CCCSSCBC------------------------------------------------------------------CCCCTT
T ss_pred             eeccCceecccCC------------------------------------------------------cceeecccccCCC
Confidence            9999998653211                                                      1123445689999


Q ss_pred             CccchhhcCC---CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CC----CCCCCCHHHHHHHHHHhc
Q 014344          250 YVAPEIIEGK---GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PP----DLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       250 y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~----~~~~~~~~~~~li~~~L~  319 (426)
                      |||||++.+.   .|+.++|||||||++|||++|+.||.+.+.......++..   .+    ....++..+.+||.+||+
T Consensus       200 ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~  279 (307)
T 3omv_A          200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVK  279 (307)
T ss_dssp             SCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTC
T ss_pred             ccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcC
Confidence            9999999753   5899999999999999999999999987766555544422   11    123568899999999999


Q ss_pred             cCCCCCCChHHHhcC
Q 014344          320 KDPTKRIGVEEIKGH  334 (426)
Q Consensus       320 ~dP~~R~s~~eil~h  334 (426)
                      .||++|||+.||+++
T Consensus       280 ~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          280 KVKEERPLFPQILSS  294 (307)
T ss_dssp             SSSTTSCCHHHHHHH
T ss_pred             CCHhHCcCHHHHHHH
Confidence            999999999988643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2e-59  Score=447.18  Aligned_cols=260  Identities=22%  Similarity=0.350  Sum_probs=222.7

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV   83 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l   83 (426)
                      ..+++.+++++++++||+|+||+||+|+..     .+++.||||++....            .....+.+.+|+.+|++|
T Consensus        19 ~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~------------~~~~~~~f~~E~~il~~l   86 (308)
T 4gt4_A           19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA------------EGPLREEFRHEAMLRARL   86 (308)
T ss_dssp             CCCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C------------CC-CHHHHHHHHHHHHHC
T ss_pred             CcccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc------------ChHHHHHHHHHHHHHHhC
Confidence            356788999999999999999999999853     467899999984321            122356789999999999


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGI  149 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~gi  149 (426)
                      +|||||++++++.+++.+|+|||||++|+|.+++....              ...+++..+..++.||+.||+|||+++|
T Consensus        87 ~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i  166 (308)
T 4gt4_A           87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV  166 (308)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999986532              2358999999999999999999999999


Q ss_pred             cccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCC
Q 014344          150 VYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDP  229 (426)
Q Consensus       150 iHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (426)
                      |||||||+||||+.++.+||+|||+|+.+....                                               
T Consensus       167 iHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~-----------------------------------------------  199 (308)
T 4gt4_A          167 VHKDLATRNVLVYDKLNVKISDLGLFREVYAAD-----------------------------------------------  199 (308)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCSCCBCGGGGGG-----------------------------------------------
T ss_pred             CCCCccccceEECCCCCEEECCcccceeccCCC-----------------------------------------------
Confidence            999999999999999999999999998653211                                               


Q ss_pred             CCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCC
Q 014344          230 PSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGE  306 (426)
Q Consensus       230 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~  306 (426)
                             ........+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+....+...  ++.+..+
T Consensus       200 -------~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~  272 (308)
T 4gt4_A          200 -------YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDC  272 (308)
T ss_dssp             -------CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred             -------ceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccc
Confidence                   1122345579999999999999999999999999999999998 89999999988888777643  3445577


Q ss_pred             CHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          307 PTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       307 ~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      |..+.+||.+||+.||++|||+.||+++
T Consensus       273 ~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          273 PAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            8999999999999999999999999875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.1e-58  Score=451.97  Aligned_cols=279  Identities=32%  Similarity=0.576  Sum_probs=237.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLL   88 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i   88 (426)
                      ...+.+++|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|..+|+.+ +||||
T Consensus        17 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~----------~~~~~~~~E~~il~~~~~hp~I   86 (353)
T 3txo_A           17 SNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD----------DDVECTMTEKRILSLARNHPFL   86 (353)
T ss_dssp             ------CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHH----------TTHHHHHHHHHHHHHTTTCTTB
T ss_pred             cCCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcch----------hHHHHHHHHHHHHHhccCCCce
Confidence            456888999999999999999999999999999999999987654332          2345678899999998 69999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++|.+.+.+|+|||||+||+|..++....  .+++..++.|+.||+.||+|||++||+||||||+|||++.+|++|
T Consensus        87 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ik  164 (353)
T 3txo_A           87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCK  164 (353)
T ss_dssp             CCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             eeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEE
Confidence            999999999999999999999999999887653  499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+|+.....                                                        .....+++||+
T Consensus       165 L~DFG~a~~~~~~--------------------------------------------------------~~~~~~~~gt~  188 (353)
T 3txo_A          165 LADFGMCKEGICN--------------------------------------------------------GVTTATFCGTP  188 (353)
T ss_dssp             ECCCTTCBCSCC-----------------------------------------------------------------CCG
T ss_pred             EccccceeecccC--------------------------------------------------------CccccccCCCc
Confidence            9999998753211                                                        12344568999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      .|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+.++.......+ ..+..+.+||++||++||.+||+
T Consensus       189 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~  268 (353)
T 3txo_A          189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLG  268 (353)
T ss_dssp             GGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             CeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccC
Confidence            99999999999999999999999999999999999999999999998886654443 35788999999999999999999


Q ss_pred             h------HHHhcCCCcCCCChhhhhhc-cCCCCCCC
Q 014344          328 V------EEIKGHEFFKGVNWELLLKI-SRPPNIPA  356 (426)
Q Consensus       328 ~------~eil~hp~f~~~~~~~~~~~-~~~~~~~~  356 (426)
                      +      ++|++||||++++|+.+... ..||..|.
T Consensus       269 ~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~  304 (353)
T 3txo_A          269 SLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPR  304 (353)
T ss_dssp             SGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             CcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCC
Confidence            8      89999999999999998754 34455543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=4.8e-58  Score=444.72  Aligned_cols=276  Identities=34%  Similarity=0.648  Sum_probs=241.9

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +.+++|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|+.+|+.++||||++++
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~iv~l~   71 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTESRVLQNTRHPFLTALK   71 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhh----------hHHHHHHHHHHHHHhCCCCcCcceE
Confidence            567899999999999999999999999999999999987654322          2345778899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++|.+.+.+|+|||||+||+|..++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+||
T Consensus        72 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DF  149 (337)
T 1o6l_A           72 YAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF  149 (337)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeec
Confidence            9999999999999999999999988764  34999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+++.....                                                        .....+.+||+.|+|
T Consensus       150 G~a~~~~~~--------------------------------------------------------~~~~~~~~gt~~y~a  173 (337)
T 1o6l_A          150 GLCKEGISD--------------------------------------------------------GATMKTFCGTPEYLA  173 (337)
T ss_dssp             TTCBCSCCT--------------------------------------------------------TCCBCCCEECGGGCC
T ss_pred             cchhhcccC--------------------------------------------------------CCcccccccChhhCC
Confidence            998754211                                                        112345689999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC-----
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI-----  326 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~-----  326 (426)
                      ||++.+..|+.++|||||||++|||++|+.||.+.+....+..+......+ ...++.+.+||.+||+.||.+||     
T Consensus       174 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~  253 (337)
T 1o6l_A          174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPS  253 (337)
T ss_dssp             GGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTT
T ss_pred             hhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCC
Confidence            999999999999999999999999999999999999888888887554433 35688999999999999999999     


Q ss_pred             ChHHHhcCCCcCCCChhhhhhcc-CCCCCCC
Q 014344          327 GVEEIKGHEFFKGVNWELLLKIS-RPPNIPA  356 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~~~~~~-~~~~~~~  356 (426)
                      +++||++||||++++|+.+.... .||..|.
T Consensus       254 ~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~  284 (337)
T 1o6l_A          254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ  284 (337)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             CHHHHHcCCCcCCCCHHHHHhCCCCCCCCCC
Confidence            89999999999999999987644 4454443

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=8.2e-58  Score=451.62  Aligned_cols=279  Identities=32%  Similarity=0.663  Sum_probs=234.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLL   88 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i   88 (426)
                      ...+.+++|+++++||+|+||+||+|+++.+++.||||++.+......          .....+..|..+|.++ +||||
T Consensus        46 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~----------~~~~~~~~E~~il~~~~~hp~I  115 (396)
T 4dc2_A           46 SSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD----------EDIDWVQTEKHVFEQASNHPFL  115 (396)
T ss_dssp             ---CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC--------------CCHHHHHHHHHHHHTTCTTB
T ss_pred             ccCCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH----------HHHHHHHHHHHHHHhcCCCCCc
Confidence            456788999999999999999999999999999999999976543221          2345678899999887 79999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++|.+++.+|+|||||+||+|..++....  .+++..++.|+.||+.||+|||++||+||||||+|||++.+|++|
T Consensus       116 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ik  193 (396)
T 4dc2_A          116 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK  193 (396)
T ss_dssp             CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             CeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEE
Confidence            999999999999999999999999999887653  499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+|+.....                                                        .....+++||+
T Consensus       194 L~DFGla~~~~~~--------------------------------------------------------~~~~~~~~gt~  217 (396)
T 4dc2_A          194 LTDYGMCKEGLRP--------------------------------------------------------GDTTSTFCGTP  217 (396)
T ss_dssp             ECCCTTCBCCCCT--------------------------------------------------------TCCBCCCCBCG
T ss_pred             EeecceeeecccC--------------------------------------------------------CCccccccCCc
Confidence            9999999753211                                                        12345678999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC---------CHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHh
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS---------SRKETFYRILCRPPDL-VGEPTPLRNLIRRLL  318 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~---------~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L  318 (426)
                      .|+|||++.+..|+.++|||||||++|||++|++||...         .....+..+....... ...+..+++||++||
T Consensus       218 ~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL  297 (396)
T 4dc2_A          218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFL  297 (396)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHh
Confidence            999999999999999999999999999999999999643         2233455555444333 356889999999999


Q ss_pred             ccCCCCCCCh------HHHhcCCCcCCCChhhhhhcc-CCCCCCC
Q 014344          319 EKDPTKRIGV------EEIKGHEFFKGVNWELLLKIS-RPPNIPA  356 (426)
Q Consensus       319 ~~dP~~R~s~------~eil~hp~f~~~~~~~~~~~~-~~~~~~~  356 (426)
                      ++||.+||++      +||++||||++++|+.+.... .||..|.
T Consensus       298 ~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p~  342 (396)
T 4dc2_A          298 NKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPN  342 (396)
T ss_dssp             CSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCCCC
T ss_pred             cCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCcCC
Confidence            9999999995      799999999999999987644 4455543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1e-57  Score=443.76  Aligned_cols=277  Identities=35%  Similarity=0.640  Sum_probs=237.9

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcc
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLP   89 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv   89 (426)
                      ..+.+++|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|..+|+.+ +||||+
T Consensus        12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~E~~il~~~~~hp~iv   81 (345)
T 1xjd_A           12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD----------DDVECTMVEKRVLSLAWEHPFLT   81 (345)
T ss_dssp             ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHHHTTCTTBC
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhh----------hhHHHHHHHHHHHHhcCCCCCCC
Confidence            45788999999999999999999999999999999999987654322          1345677899999887 899999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +++++|++.+.+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||
T Consensus        82 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL  159 (345)
T 1xjd_A           82 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI  159 (345)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEE
T ss_pred             cEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEE
Confidence            99999999999999999999999999987653  4999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.....                                                        .....+.+||+.
T Consensus       160 ~DFG~a~~~~~~--------------------------------------------------------~~~~~~~~gt~~  183 (345)
T 1xjd_A          160 ADFGMCKENMLG--------------------------------------------------------DAKTNTFCGTPD  183 (345)
T ss_dssp             CCCTTCBCCCCT--------------------------------------------------------TCCBCCCCSCGG
T ss_pred             eEChhhhhcccC--------------------------------------------------------CCcccCCCCCcc
Confidence            999998754211                                                        112446689999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCCh
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |+|||++.+..|+.++|||||||++|||++|+.||.+.+..+.+..+....+..+ ..+..+.+||.+||+.||++||++
T Consensus       184 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~  263 (345)
T 1xjd_A          184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV  263 (345)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTT
T ss_pred             cCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCC
Confidence            9999999999999999999999999999999999999999888888876554433 468899999999999999999999


Q ss_pred             H-HHhcCCCcCCCChhhhhhcc-CCCCCC
Q 014344          329 E-EIKGHEFFKGVNWELLLKIS-RPPNIP  355 (426)
Q Consensus       329 ~-eil~hp~f~~~~~~~~~~~~-~~~~~~  355 (426)
                      . +|++||||++++|+.+.... .||..|
T Consensus       264 ~~~i~~hp~f~~~~w~~l~~~~~~~p~~p  292 (345)
T 1xjd_A          264 RGDIRQHPLFREINWEELERKEIDPPFRP  292 (345)
T ss_dssp             BSCGGGSGGGTTCCHHHHHTTCSCC----
T ss_pred             hHHHHcCccccCCCHHHHhhCCCCCCcCC
Confidence            8 99999999999999987644 344444

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.9e-57  Score=443.24  Aligned_cols=282  Identities=32%  Similarity=0.580  Sum_probs=240.4

Q ss_pred             CCCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CC
Q 014344            7 DRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EH   85 (426)
Q Consensus         7 ~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h   85 (426)
                      ......+.+++|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|..+|..+ .|
T Consensus        11 ~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~----------~~~~~~~~E~~~l~~~~~h   80 (353)
T 2i0e_A           11 NGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----------DDVECTMVEKRVLALPGKP   80 (353)
T ss_dssp             --------CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHTCTTCC
T ss_pred             CCCcCCCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcc----------hHHHHHHHHHHHHHhcCCC
Confidence            334567889999999999999999999999999999999999987654332          2345678899999988 79


Q ss_pred             CCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      |||++++++|++.+.+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|
T Consensus        81 p~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g  158 (353)
T 2i0e_A           81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG  158 (353)
T ss_dssp             TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC
Confidence            999999999999999999999999999999987653  499999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      ++||+|||+++.....                                                        .....+++
T Consensus       159 ~vkL~DFG~a~~~~~~--------------------------------------------------------~~~~~~~~  182 (353)
T 2i0e_A          159 HIKIADFGMCKENIWD--------------------------------------------------------GVTTKTFC  182 (353)
T ss_dssp             CEEECCCTTCBCCCCT--------------------------------------------------------TCCBCCCC
T ss_pred             cEEEEeCCcccccccC--------------------------------------------------------Cccccccc
Confidence            9999999998753211                                                        11234568


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~  324 (426)
                      ||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+.+++...... ...+..+.+||.+||+.||.+
T Consensus       183 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~  262 (353)
T 2i0e_A          183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGK  262 (353)
T ss_dssp             SCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTS
T ss_pred             CCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHH
Confidence            9999999999999999999999999999999999999999999999888887654433 356889999999999999999


Q ss_pred             CCC-----hHHHhcCCCcCCCChhhhhhcc-CCCCCCC
Q 014344          325 RIG-----VEEIKGHEFFKGVNWELLLKIS-RPPNIPA  356 (426)
Q Consensus       325 R~s-----~~eil~hp~f~~~~~~~~~~~~-~~~~~~~  356 (426)
                      ||+     +++|++||||++++|+.+.... .||..|.
T Consensus       263 R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~  300 (353)
T 2i0e_A          263 RLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPK  300 (353)
T ss_dssp             CTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             cCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCcCCC
Confidence            995     6999999999999999987643 4555543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-57  Score=436.71  Aligned_cols=274  Identities=34%  Similarity=0.653  Sum_probs=241.3

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+.+++|++++.||+|+||+||+|+++.+|+.||||++.+......          .....+..|+.+|+.++||||+++
T Consensus         2 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~Iv~~   71 (318)
T 1fot_A            2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL----------KQVEHTNDERLMLSIVTHPFIIRM   71 (318)
T ss_dssp             -CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHSCCBTTBCCE
T ss_pred             CCChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHhhCCCCCCceE
Confidence            4678899999999999999999999999999999999987654332          134567789999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +++|.+...+|+|||||+||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|
T Consensus        72 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~D  149 (318)
T 1fot_A           72 WGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITD  149 (318)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECC
T ss_pred             eEEEEeCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEee
Confidence            99999999999999999999999998764  3499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+++....                                                           ...+.+||+.|+
T Consensus       150 fg~a~~~~~-----------------------------------------------------------~~~~~~gt~~y~  170 (318)
T 1fot_A          150 FGFAKYVPD-----------------------------------------------------------VTYTLCGTPDYI  170 (318)
T ss_dssp             CSSCEECSS-----------------------------------------------------------CBCCCCSCTTTC
T ss_pred             cCcceecCC-----------------------------------------------------------ccccccCCcccc
Confidence            999876421                                                           123457999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC----
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI----  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~----  326 (426)
                      |||++.+..++.++|||||||++|+|++|+.||.+.+..+.+.+++...... ...+..+.+||.+||+.||++|+    
T Consensus       171 aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~  250 (318)
T 1fot_A          171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQ  250 (318)
T ss_dssp             CHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSST
T ss_pred             CHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcC
Confidence            9999999999999999999999999999999999999988888887654433 34578999999999999999999    


Q ss_pred             -ChHHHhcCCCcCCCChhhhhhcc-CCCCCCC
Q 014344          327 -GVEEIKGHEFFKGVNWELLLKIS-RPPNIPA  356 (426)
Q Consensus       327 -s~~eil~hp~f~~~~~~~~~~~~-~~~~~~~  356 (426)
                       ++++|++||||++++|+.+.... .||..|.
T Consensus       251 ~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~  282 (318)
T 1fot_A          251 NGTEDVKNHPWFKEVVWEKLLSRNIETPYEPP  282 (318)
T ss_dssp             TTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred             CCHHHHhcCccccCCCHHHHHhCCCCCCCCCC
Confidence             89999999999999999987643 3455543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=7.9e-57  Score=438.54  Aligned_cols=276  Identities=33%  Similarity=0.612  Sum_probs=244.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+.+++|++++.||+|+||.||+|++..+++.||||++.+......          .....+.+|+.+|+.++||||+
T Consensus        35 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~iv  104 (350)
T 1rdq_E           35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL----------KQIEHTLNEKRILQAVNFPFLV  104 (350)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHTTCCCTTBC
T ss_pred             ccCCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccH----------HHHHHHHHHHHHHHhCCCCCCC
Confidence            445788999999999999999999999999999999999977654332          2346788899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.+...+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||
T Consensus       105 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL  182 (350)
T 1rdq_E          105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV  182 (350)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             eEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEE
Confidence            99999999999999999999999999987653  4999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++....                                                           ...+.+||+.
T Consensus       183 ~DFg~a~~~~~-----------------------------------------------------------~~~~~~gt~~  203 (350)
T 1rdq_E          183 TDFGFAKRVKG-----------------------------------------------------------RTWTLCGTPE  203 (350)
T ss_dssp             CCCTTCEECSS-----------------------------------------------------------CBCCCEECGG
T ss_pred             cccccceeccC-----------------------------------------------------------CcccccCCcc
Confidence            99999876521                                                           1234579999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC-
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG-  327 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s-  327 (426)
                      |+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+.++......+ ...+..+.+||.+||+.||.+||+ 
T Consensus       204 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~  283 (350)
T 1rdq_E          204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGN  283 (350)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTS
T ss_pred             ccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCC
Confidence            999999999999999999999999999999999999999988888887654433 356889999999999999999998 


Q ss_pred             ----hHHHhcCCCcCCCChhhhhhc-cCCCCCCC
Q 014344          328 ----VEEIKGHEFFKGVNWELLLKI-SRPPNIPA  356 (426)
Q Consensus       328 ----~~eil~hp~f~~~~~~~~~~~-~~~~~~~~  356 (426)
                          +++|++||||++++|+.+... ..||.+|.
T Consensus       284 ~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~  317 (350)
T 1rdq_E          284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK  317 (350)
T ss_dssp             STTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             ccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCC
Confidence                999999999999999998754 34455553

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=2.6e-57  Score=450.24  Aligned_cols=277  Identities=32%  Similarity=0.562  Sum_probs=238.9

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+..++|++++.||+|+||+||+|+++.+++.||+|++.+.......          ....+..|+.+|+.++||||+++
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~----------~~~~~~~E~~il~~l~hp~Iv~l  134 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRS----------DSAFFWEERDIMAFANSPWVVQL  134 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTC----------CCSTHHHHHHHHHHCCCTTBCCE
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhH----------HHHHHHHHHHHHHhCCCCCCCeE
Confidence            45678999999999999999999999999999999999775543321          23457789999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +++|.++..+|+|||||+||+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|
T Consensus       135 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~D  211 (410)
T 3v8s_A          135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLAD  211 (410)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEEECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEec
Confidence            99999999999999999999999988653   499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+.+....                                                       .....+.+||+.|+
T Consensus       212 FG~a~~~~~~~-------------------------------------------------------~~~~~~~~gt~~Y~  236 (410)
T 3v8s_A          212 FGTCMKMNKEG-------------------------------------------------------MVRCDTAVGTPDYI  236 (410)
T ss_dssp             CTTCEECCTTS-------------------------------------------------------EEECCSCCSCGGGC
T ss_pred             cceeEeeccCC-------------------------------------------------------cccccCCcCCcccc
Confidence            99997653211                                                       11234568999999


Q ss_pred             cchhhcCCC----CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCHHHHHHHHHHhccCC
Q 014344          252 APEIIEGKG----HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       252 aPE~~~~~~----~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      |||++.+..    |+.++|||||||++|||++|++||.+.+..+.+.+++..     .+.....+..+++||++||+.+|
T Consensus       237 APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~  316 (410)
T 3v8s_A          237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDRE  316 (410)
T ss_dssp             CHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGG
T ss_pred             CHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChh
Confidence            999998766    789999999999999999999999999999888888642     23334678999999999999999


Q ss_pred             CC--CCChHHHhcCCCcCCCChhhhhh-ccCCCCCCC
Q 014344          323 TK--RIGVEEIKGHEFFKGVNWELLLK-ISRPPNIPA  356 (426)
Q Consensus       323 ~~--R~s~~eil~hp~f~~~~~~~~~~-~~~~~~~~~  356 (426)
                      .+  |++++||++||||++++|+.+.. ...||.+|.
T Consensus       317 ~rlgR~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~  353 (410)
T 3v8s_A          317 VRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPD  353 (410)
T ss_dssp             GCTTSSCHHHHHTSGGGCCSSCCSTTGGGSCCSCCCC
T ss_pred             hhCCCCCHHHHhcCccccCCCHHHHhhcccCCCCCCc
Confidence            88  99999999999999999986644 345555554

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=9.7e-57  Score=437.14  Aligned_cols=278  Identities=32%  Similarity=0.667  Sum_probs=236.1

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLL   88 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i   88 (426)
                      ...+.+++|++++.||+|+||.||+|+++.+++.||||++.+....          .......+..|+.+|+++ +||||
T Consensus         3 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----------~~~~~~~~~~E~~~l~~~~~hp~i   72 (345)
T 3a8x_A            3 MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN----------DDEDIDWVQTEKHVFEQASNHPFL   72 (345)
T ss_dssp             CCCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC----------SHHHHHHHHHHHHHHHHTTTCTTB
T ss_pred             CCCCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc----------chHHHHHHHHHHHHHHhcCCCCcc
Confidence            3567889999999999999999999999999999999999765432          123456788899999988 89999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++|.++..+|+|||||+||+|..++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++|
T Consensus        73 v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~k  150 (345)
T 3a8x_A           73 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK  150 (345)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEE
T ss_pred             CeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEE
Confidence            999999999999999999999999999887653  499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.....                                                        .....+.+||+
T Consensus       151 L~DFG~a~~~~~~--------------------------------------------------------~~~~~~~~gt~  174 (345)
T 3a8x_A          151 LTDYGMCKEGLRP--------------------------------------------------------GDTTSTFCGTP  174 (345)
T ss_dssp             ECCGGGCBCSCCT--------------------------------------------------------TCCBCCCCSCG
T ss_pred             EEeccccccccCC--------------------------------------------------------CCcccccCCCc
Confidence            9999998753211                                                        11234568999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCC---------CCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHh
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRG---------SSRKETFYRILCRPPD-LVGEPTPLRNLIRRLL  318 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~---------~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L  318 (426)
                      .|+|||++.+..|+.++|||||||++|||++|+.||..         ......+..+...... ....+..+.+||.+||
T Consensus       175 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL  254 (345)
T 3a8x_A          175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFL  254 (345)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             cccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999975         2334445555544333 2356889999999999


Q ss_pred             ccCCCCCCCh------HHHhcCCCcCCCChhhhhhcc-CCCCCC
Q 014344          319 EKDPTKRIGV------EEIKGHEFFKGVNWELLLKIS-RPPNIP  355 (426)
Q Consensus       319 ~~dP~~R~s~------~eil~hp~f~~~~~~~~~~~~-~~~~~~  355 (426)
                      +.||.+||++      ++|++||||++++|+.+.+.. .||..|
T Consensus       255 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~~p~~p  298 (345)
T 3a8x_A          255 NKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP  298 (345)
T ss_dssp             CSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred             cCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCCCCcCC
Confidence            9999999996      799999999999999987644 344444

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=5.9e-58  Score=444.54  Aligned_cols=258  Identities=21%  Similarity=0.337  Sum_probs=216.7

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCC-----CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVES-----SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      |+++.++|++++.||+|+||+||+|++..+     ++.||||++....            .....+.+.+|+.+|+++.|
T Consensus        59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~------------~~~~~~~~~~E~~il~~l~h  126 (353)
T 4ase_A           59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA------------THSEHRALMSELKILIHIGH  126 (353)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC------------CHHHHHHHHHHHHHHHHHCC
T ss_pred             cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc------------ChHHHHHHHHHHHHHHHcCC
Confidence            467788999999999999999999997654     3679999985432            12345678999999999976


Q ss_pred             -CCcceeeeeeec-CCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014344           86 -PLLPRLRGVLST-DKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGI  149 (426)
Q Consensus        86 -p~iv~l~~~~~~-~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~gi  149 (426)
                       ||||++++++.. ++.+|+|||||+||+|.++++...              ...+++..+..|+.||+.||+|||+++|
T Consensus       127 hpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~i  206 (353)
T 4ase_A          127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC  206 (353)
T ss_dssp             CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCe
Confidence             899999999865 567999999999999999987643              2348999999999999999999999999


Q ss_pred             cccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCC
Q 014344          150 VYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDP  229 (426)
Q Consensus       150 iHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (426)
                      |||||||+|||++.++.+||+|||+|+.+....                                               
T Consensus       207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~-----------------------------------------------  239 (353)
T 4ase_A          207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDP-----------------------------------------------  239 (353)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-----------------------------------------------
T ss_pred             ecCccCccceeeCCCCCEEECcchhhhhcccCC-----------------------------------------------
Confidence            999999999999999999999999998764221                                               


Q ss_pred             CCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh---cCCCCCCC
Q 014344          230 PSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRIL---CRPPDLVG  305 (426)
Q Consensus       230 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~---~~~~~~~~  305 (426)
                             ......+.+||+.|||||++.+..|+.++|||||||++|||++ |+.||.+.+..+.+.+.+   ..++.+..
T Consensus       240 -------~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~  312 (353)
T 4ase_A          240 -------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY  312 (353)
T ss_dssp             -------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTT
T ss_pred             -------CceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCcc
Confidence                   1113345679999999999999999999999999999999998 999999876544444433   22344456


Q ss_pred             CCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       306 ~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .++++.+||.+||+.||++|||+.||++|
T Consensus       313 ~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          313 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            78999999999999999999999999987

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=9.4e-57  Score=449.59  Aligned_cols=279  Identities=34%  Similarity=0.570  Sum_probs=239.8

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+..++|+++++||+|+||+||+|+++.+++.||||++.+.......          ....+..|+.+|..++||||+++
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~----------~~~~~~~E~~il~~~~hp~Iv~l  139 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRA----------ETACFREERDVLVNGDSKWITTL  139 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTT----------TTCCHHHHHHHHHHSCTTTBCCE
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHH----------HHHHHHHHHHHHHhCCCCCEEEE
Confidence            35567899999999999999999999999999999999775543321          23457789999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +++|.+++.+|+|||||+||+|.+++.... ..+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|
T Consensus       140 ~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~D  218 (437)
T 4aw2_A          140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLAD  218 (437)
T ss_dssp             EEEEECSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEeeCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcc
Confidence            999999999999999999999999987532 4599999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+.+....                                                       .......+||+.|+
T Consensus       219 FGla~~~~~~~-------------------------------------------------------~~~~~~~~GT~~Y~  243 (437)
T 4aw2_A          219 FGSCLKLMEDG-------------------------------------------------------TVQSSVAVGTPDYI  243 (437)
T ss_dssp             CTTCEECCTTS-------------------------------------------------------CEECCSCCSCGGGC
T ss_pred             hhhhhhcccCC-------------------------------------------------------CcccccccCCcCee
Confidence            99997653211                                                       11223457999999


Q ss_pred             cchhhc-----CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc------CCCCCCCCCHHHHHHHHHHhcc
Q 014344          252 APEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC------RPPDLVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       252 aPE~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~------~~~~~~~~~~~~~~li~~~L~~  320 (426)
                      |||++.     ...|+.++|||||||++|||++|++||.+.+..+.+.+++.      .+......+..+++||++||+.
T Consensus       244 APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~  323 (437)
T 4aw2_A          244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICS  323 (437)
T ss_dssp             CHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSC
T ss_pred             ChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcc
Confidence            999997     45689999999999999999999999999999888888753      2233345789999999999999


Q ss_pred             CCCC--CCChHHHhcCCCcCCCChhhhhhccCCCCCCCC
Q 014344          321 DPTK--RIGVEEIKGHEFFKGVNWELLLKISRPPNIPAR  357 (426)
Q Consensus       321 dP~~--R~s~~eil~hp~f~~~~~~~~~~~~~~~~~~~~  357 (426)
                      +|.+  |++++||++||||++++|+.+. ...||.+|..
T Consensus       324 ~~~r~~r~~~~eil~Hpff~~i~w~~l~-~~~~p~~P~~  361 (437)
T 4aw2_A          324 REHRLGQNGIEDFKKHPFFSGIDWDNIR-NCEAPYIPEV  361 (437)
T ss_dssp             GGGCTTTTTTHHHHTSGGGTTCCTTTGG-GSCCSCCCCC
T ss_pred             cccccCCCCHHHHhCCCccCCCCHHHHh-hCCCCCCCcC
Confidence            8888  9999999999999999999984 4456666644

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=9.8e-57  Score=441.25  Aligned_cols=277  Identities=39%  Similarity=0.667  Sum_probs=233.3

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHH-HHhcCCCCcc
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV-LRNVEHPLLP   89 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i-l~~l~hp~iv   89 (426)
                      ..+..++|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|..+ ++.++||||+
T Consensus        33 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~----------~~~~~~~~e~~~ll~~~~hp~Iv  102 (373)
T 2r5t_A           33 PHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK----------KEEKHIMSERNVLLKNVKHPFLV  102 (373)
T ss_dssp             TTCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-----------------------CCBCCCCCTTBC
T ss_pred             CCCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh----------HHHHHHHHHHHHHHHhCCCCCCC
Confidence            45778899999999999999999999999999999999977543222          123455667776 5678999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +++++|.+.+.+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||
T Consensus       103 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL  180 (373)
T 2r5t_A          103 GLHFSFQTADKLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVL  180 (373)
T ss_dssp             CEEEEEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEE
T ss_pred             CEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEE
Confidence            99999999999999999999999999887653  4999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.....                                                        .....+++||+.
T Consensus       181 ~DFG~a~~~~~~--------------------------------------------------------~~~~~~~~gt~~  204 (373)
T 2r5t_A          181 TDFGLCKENIEH--------------------------------------------------------NSTTSTFCGTPE  204 (373)
T ss_dssp             CCCCBCGGGBCC--------------------------------------------------------CCCCCSBSCCCC
T ss_pred             eeCccccccccC--------------------------------------------------------CCccccccCCcc
Confidence            999998753211                                                        113445689999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |+|||++.+..|+.++|||||||++|||++|..||.+.+..+.+.+++..+... ...+..+++||.+||+.||.+||++
T Consensus       205 y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~  284 (373)
T 2r5t_A          205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGA  284 (373)
T ss_dssp             CCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTT
T ss_pred             ccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCC
Confidence            999999999999999999999999999999999999999999998888665443 3568899999999999999999986


Q ss_pred             ----HHHhcCCCcCCCChhhhhhcc-CCCCCC
Q 014344          329 ----EEIKGHEFFKGVNWELLLKIS-RPPNIP  355 (426)
Q Consensus       329 ----~eil~hp~f~~~~~~~~~~~~-~~~~~~  355 (426)
                          .+|++||||++++|+.+.... .||..|
T Consensus       285 ~~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p  316 (373)
T 2r5t_A          285 KDDFMEIKSHVFFSLINWDDLINKKITPPFNP  316 (373)
T ss_dssp             TTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred             CCCHHHHhCCccccCCCHHHHHhCCCCCCCCC
Confidence                699999999999999987644 445554

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2e-56  Score=444.17  Aligned_cols=277  Identities=33%  Similarity=0.578  Sum_probs=237.5

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+..++|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|+.+|..++||||+++
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~----------~~~~~~~~E~~il~~~~hp~Iv~l  126 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR----------GEVSCFREERDVLVNGDRRWITQL  126 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHH----------GGGCCHHHHHHHHHHSCTTTBCCE
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhH----------HHHHHHHHHHHHHHhcCCCCeeeE
Confidence            4667899999999999999999999999999999999987554332          134567889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      +++|++++.+|+|||||+||+|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++.+|++||+|
T Consensus       127 ~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~D  205 (412)
T 2vd5_A          127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLAD  205 (412)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EEEEeeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEee
Confidence            999999999999999999999999987653 3599999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+++.+....                                                       .......+||+.|+
T Consensus       206 FGla~~~~~~~-------------------------------------------------------~~~~~~~~Gt~~Y~  230 (412)
T 2vd5_A          206 FGSCLKLRADG-------------------------------------------------------TVRSLVAVGTPDYL  230 (412)
T ss_dssp             CTTCEECCTTS-------------------------------------------------------CEECSSCCSCGGGC
T ss_pred             chhheeccCCC-------------------------------------------------------ccccceeccccCcC
Confidence            99998653211                                                       01233567999999


Q ss_pred             cchhhc-------CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCHHHHHHHHHHh
Q 014344          252 APEIIE-------GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR------PPDLVGEPTPLRNLIRRLL  318 (426)
Q Consensus       252 aPE~~~-------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~li~~~L  318 (426)
                      |||++.       +..|+.++|||||||++|||++|++||.+.+..+.+.+++..      +......+..+++||++||
T Consensus       231 APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL  310 (412)
T 2vd5_A          231 SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL  310 (412)
T ss_dssp             CHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTS
T ss_pred             CHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHc
Confidence            999997       356899999999999999999999999999998888877631      1112357899999999999


Q ss_pred             ccCCCCCC---ChHHHhcCCCcCCCChhhhhhccCCCCCCC
Q 014344          319 EKDPTKRI---GVEEIKGHEFFKGVNWELLLKISRPPNIPA  356 (426)
Q Consensus       319 ~~dP~~R~---s~~eil~hp~f~~~~~~~~~~~~~~~~~~~  356 (426)
                      + +|.+|+   +++||++||||++++|+.+.+ ..||..|.
T Consensus       311 ~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l~~-~~~p~~p~  349 (412)
T 2vd5_A          311 C-PPETRLGRGGAGDFRTHPFFFGLDWDGLRD-SVPPFTPD  349 (412)
T ss_dssp             S-CGGGCTTTTTHHHHHTSGGGTTCCSTTSTT-SCCSCCCC
T ss_pred             C-ChhhcCCCCCHHHHhcCCCcCCCCHHHHhh-cCCCCCCc
Confidence            9 999984   899999999999999999854 45666654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=8.2e-56  Score=435.80  Aligned_cols=278  Identities=29%  Similarity=0.577  Sum_probs=238.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+.+++|++++.||+|+||+||+|++..+++.||||++.+......          .....+.+|+.+|+.++||||+
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~----------~~~~~~~~E~~il~~l~hp~Iv   78 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVER----------NEVRNVFKELQIMQGLEHPFLV   78 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHTCCCTTBC
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccH----------HHHHHHHHHHHHHHhCCCCCCC
Confidence            467889999999999999999999999999999999999977654332          2356788899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +++++|.+...+|+|||||.||+|..++...  ..+++..++.|+.||+.||.|||++||+||||||+|||++.+|++||
T Consensus        79 ~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL  156 (384)
T 4fr4_A           79 NLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHI  156 (384)
T ss_dssp             CEEEEEECSSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEE
T ss_pred             cEEEEEEeCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEE
Confidence            9999999999999999999999999988754  45999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+...                                                         ....+.+||+.
T Consensus       157 ~DFG~a~~~~~~---------------------------------------------------------~~~~~~~gt~~  179 (384)
T 4fr4_A          157 TDFNIAAMLPRE---------------------------------------------------------TQITTMAGTKP  179 (384)
T ss_dssp             CCCTTCEECCTT---------------------------------------------------------CCBCCCCSCGG
T ss_pred             eccceeeeccCC---------------------------------------------------------CceeccCCCcc
Confidence            999999765321                                                         12345679999


Q ss_pred             CccchhhcC---CCCChhhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHhcCCC-CCCCCCHHHHHHHHHHhccCC
Q 014344          250 YVAPEIIEG---KGHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCRPP-DLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       250 y~aPE~~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~---~~~~~~~~i~~~~~-~~~~~~~~~~~li~~~L~~dP  322 (426)
                      |+|||++.+   ..|+.++|||||||++|+|++|+.||...   ...+.+..+..... .....+..+.+||.+||+.||
T Consensus       180 Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP  259 (384)
T 4fr4_A          180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNP  259 (384)
T ss_dssp             GCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred             ccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCH
Confidence            999999974   45899999999999999999999999753   33444444443333 334568899999999999999


Q ss_pred             CCCCC-hHHHhcCCCcCCCChhhhhhc-cCCCCCCC
Q 014344          323 TKRIG-VEEIKGHEFFKGVNWELLLKI-SRPPNIPA  356 (426)
Q Consensus       323 ~~R~s-~~eil~hp~f~~~~~~~~~~~-~~~~~~~~  356 (426)
                      .+||+ ++++++||||++++|+.+... ..||.+|.
T Consensus       260 ~~R~s~~~~l~~hp~f~~~~w~~~~~~~~~p~~~p~  295 (384)
T 4fr4_A          260 DQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIPN  295 (384)
T ss_dssp             GGSCCSHHHHHTSGGGTTCCHHHHHTTCSCCCCCCS
T ss_pred             hHhcccHHHHHcChhhhcCCHHHHHhCCCCCCCCCC
Confidence            99998 899999999999999998764 44555554

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.2e-55  Score=424.64  Aligned_cols=261  Identities=28%  Similarity=0.464  Sum_probs=229.7

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ....+++|++++.||+|+||+||+|++..+|+.||||++.+...           .....+++.+|+.+|+.++||||++
T Consensus        10 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~hpnIv~   78 (328)
T 3fe3_A           10 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-----------NPTSLQKLFREVRIMKILNHPNIVK   78 (328)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-----------CHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-----------CHHHHHHHHHHHHHHHhCCCCCEee
Confidence            44567899999999999999999999999999999999966432           1234567889999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++.+.+.+|+|||||+|++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        79 l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~  156 (328)
T 3fe3_A           79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIA  156 (328)
T ss_dssp             EEEEEECSSEEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEEECCEEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEe
Confidence            9999999999999999999999999987653  49999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++......                                                         ......+||+.|
T Consensus       157 DFG~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y  179 (328)
T 3fe3_A          157 DFGFSNEFTVG---------------------------------------------------------GKLDAFCGAPPY  179 (328)
T ss_dssp             STTCCGGGSSS---------------------------------------------------------CGGGTTSSSGGG
T ss_pred             eccCceecCCC---------------------------------------------------------CccccccCCcce
Confidence            99998765321                                                         123456799999


Q ss_pred             ccchhhcCCCCC-hhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          251 VAPEIIEGKGHD-FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       251 ~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      +|||++.+..+. .++|||||||++|+|++|+.||.+.+..+....+....... ...++.+.+||++||+.||.+|||+
T Consensus       180 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~  259 (328)
T 3fe3_A          180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL  259 (328)
T ss_dssp             CCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCH
T ss_pred             eCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCH
Confidence            999999988874 89999999999999999999999999888888877554333 3458899999999999999999999


Q ss_pred             HHHhcCCCcCCCC
Q 014344          329 EEIKGHEFFKGVN  341 (426)
Q Consensus       329 ~eil~hp~f~~~~  341 (426)
                      +|+++||||+...
T Consensus       260 ~eil~h~~~~~~~  272 (328)
T 3fe3_A          260 EQIMKDRWINAGH  272 (328)
T ss_dssp             HHHTTCTTTTTTC
T ss_pred             HHHhcCHhhcCCC
Confidence            9999999998654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=2.7e-55  Score=441.69  Aligned_cols=278  Identities=35%  Similarity=0.634  Sum_probs=231.7

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+..++|++++.||+|+||.||+|++..+++.||||++.+......          .....+..|+.+|+.++||||+
T Consensus       142 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~iv  211 (446)
T 4ejn_A          142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNSRHPFLT  211 (446)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-----------------------CCCCCSCTTSC
T ss_pred             ccCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhh----------HHHHHHHHHHHHHHhCCCCeEe
Confidence            345677899999999999999999999999999999999976543221          2345667799999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++.+.+.+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||+ +||+||||||+|||++.+|.+|
T Consensus       212 ~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~k  289 (446)
T 4ejn_A          212 ALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIK  289 (446)
T ss_dssp             CEEEEEEETTEEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEE
T ss_pred             eEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEE
Confidence            99999999999999999999999999887653  59999999999999999999998 9999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.....                                                        .......+||+
T Consensus       290 l~DFG~a~~~~~~--------------------------------------------------------~~~~~~~~gt~  313 (446)
T 4ejn_A          290 ITDFGLCKEGIKD--------------------------------------------------------GATMKTFCGTP  313 (446)
T ss_dssp             ECCCCCCCTTCC-------------------------------------------------------------CCSSSCG
T ss_pred             EccCCCceeccCC--------------------------------------------------------CcccccccCCc
Confidence            9999998754211                                                        11234567999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC-
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI-  326 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~-  326 (426)
                      .|+|||++.+..|+.++|||||||++|+|++|+.||.+.+....+..+....... ...++.+.+||.+||+.||.+|| 
T Consensus       314 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~  393 (446)
T 4ejn_A          314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLG  393 (446)
T ss_dssp             GGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             cccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHHHhCC
Confidence            9999999999999999999999999999999999999999888888877554433 35688999999999999999999 


Q ss_pred             ----ChHHHhcCCCcCCCChhhhhhccCC-CCCC
Q 014344          327 ----GVEEIKGHEFFKGVNWELLLKISRP-PNIP  355 (426)
Q Consensus       327 ----s~~eil~hp~f~~~~~~~~~~~~~~-~~~~  355 (426)
                          +++|+++||||++++|+.+.....+ |..|
T Consensus       394 ~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~p  427 (446)
T 4ejn_A          394 GGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP  427 (446)
T ss_dssp             CSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred             CCCCCHHHHHhCccccCCCHHHHhhCcCCCCccC
Confidence                9999999999999999998765444 4444

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=5.1e-55  Score=459.70  Aligned_cols=279  Identities=32%  Similarity=0.586  Sum_probs=242.2

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLL   88 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i   88 (426)
                      ...+.+++|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|..+|..+ .||+|
T Consensus       335 ~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~----------~~~~~~~~E~~~l~~~~~~~~i  404 (674)
T 3pfq_A          335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----------DDVECTMVEKRVLALPGKPPFL  404 (674)
T ss_dssp             -----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHT----------TTTHHHHHHHHHHTCTTCCTTB
T ss_pred             cccccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccH----------HHHHHHHHHHHHHHhccCCCeE
Confidence            345778999999999999999999999999999999999987654332          2345678899999988 69999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +.++++|++.+.+|+||||++||+|..++....  .+++..++.|+.||+.||+|||++|||||||||+||||+.+|++|
T Consensus       405 ~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ik  482 (674)
T 3pfq_A          405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIK  482 (674)
T ss_dssp             CCEEEECBCSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEE
T ss_pred             EEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEE
Confidence            999999999999999999999999999987654  499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.....                                                        .....+++||+
T Consensus       483 L~DFGla~~~~~~--------------------------------------------------------~~~~~~~~GT~  506 (674)
T 3pfq_A          483 IADFGMCKENIWD--------------------------------------------------------GVTTKTFCGTP  506 (674)
T ss_dssp             ECCCTTCEECCCT--------------------------------------------------------TCCBCCCCSCS
T ss_pred             EeecceeeccccC--------------------------------------------------------CcccccccCCC
Confidence            9999999753211                                                        12345678999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      .|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..|+.....+ ...+..+.+||++||++||.+|++
T Consensus       507 ~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~  586 (674)
T 3pfq_A          507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLG  586 (674)
T ss_dssp             SSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTT
T ss_pred             cccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHccCCHHHCCC
Confidence            9999999999999999999999999999999999999999999999998765444 356889999999999999999999


Q ss_pred             h-----HHHhcCCCcCCCChhhhhhc-cCCCCCCC
Q 014344          328 V-----EEIKGHEFFKGVNWELLLKI-SRPPNIPA  356 (426)
Q Consensus       328 ~-----~eil~hp~f~~~~~~~~~~~-~~~~~~~~  356 (426)
                      +     +||++||||++++|+.+... ..||..|.
T Consensus       587 ~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~  621 (674)
T 3pfq_A          587 CGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPK  621 (674)
T ss_dssp             CSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCB
T ss_pred             CCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCc
Confidence            7     99999999999999998764 34555553

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.6e-55  Score=421.75  Aligned_cols=275  Identities=36%  Similarity=0.660  Sum_probs=227.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      ...+..++|++++.||+|+||.||+|++.   .+++.||||++.+......         ......+..|+.+|+.++||
T Consensus        11 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~hp   81 (327)
T 3a62_A           11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN---------AKDTAHTKAERNILEEVKHP   81 (327)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC-----------------------HHHHHHHCCCT
T ss_pred             CCCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhh---------hhHHHHHHHHHHHHHhCCCC
Confidence            45678899999999999999999999985   6899999999976543211         12334567799999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++.+++.+|+|||||+|++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+|.
T Consensus        82 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~  159 (327)
T 3a62_A           82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH  159 (327)
T ss_dssp             TBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSC
T ss_pred             CccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCc
Confidence            99999999999999999999999999999887653  4999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++......                                                        .......+|
T Consensus       160 ~kl~Dfg~~~~~~~~--------------------------------------------------------~~~~~~~~g  183 (327)
T 3a62_A          160 VKLTDFGLCKESIHD--------------------------------------------------------GTVTHTFCG  183 (327)
T ss_dssp             EEECCCSCC------------------------------------------------------------------CTTSS
T ss_pred             EEEEeCCcccccccC--------------------------------------------------------CccccccCC
Confidence            999999998754211                                                        112334579


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      |+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+.++....... ...+..+.+||.+||..||.+|
T Consensus       184 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R  263 (327)
T 3a62_A          184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASR  263 (327)
T ss_dssp             CCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGS
T ss_pred             CcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhc
Confidence            999999999999999999999999999999999999999999888888877544333 3457899999999999999999


Q ss_pred             C-----ChHHHhcCCCcCCCChhhhhhccCC
Q 014344          326 I-----GVEEIKGHEFFKGVNWELLLKISRP  351 (426)
Q Consensus       326 ~-----s~~eil~hp~f~~~~~~~~~~~~~~  351 (426)
                      |     ++.++++||||++++|+.+......
T Consensus       264 ~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~  294 (327)
T 3a62_A          264 LGAGPGDAGEVQAHPFFRHINWEELLARKVE  294 (327)
T ss_dssp             TTSSTTTHHHHHHSGGGSSCCHHHHHTTCSC
T ss_pred             cCCCCCCHHHHHcCCcccCCCHHHHhhccCC
Confidence            9     7899999999999999988764333

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=6.4e-55  Score=426.62  Aligned_cols=265  Identities=28%  Similarity=0.448  Sum_probs=231.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|++++.||+|+||+||+|+++.+|+.||+|++.+......       ........+.+|+.+|+.++||||++++++|
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~-------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~   84 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRAS-------RRGVCREEIEREVSILRQVLHPNIITLHDVY   84 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTC-------SSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccc-------cchhHHHHHHHHHHHHHhCCCcCCCcEEEEE
Confidence            459999999999999999999999999999999966432111       1112346788999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC----cEEEec
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG----HIMLVD  171 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g----~ikL~D  171 (426)
                      .+...+|+|||||+||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|
T Consensus        85 ~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~D  162 (361)
T 2yab_A           85 ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLID  162 (361)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred             EeCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence            9999999999999999999988643  4599999999999999999999999999999999999998877    799999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+...                                                         ......+||+.|+
T Consensus       163 FG~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~  185 (361)
T 2yab_A          163 FGLAHEIEDG---------------------------------------------------------VEFKNIFGTPEFV  185 (361)
T ss_dssp             CSSCEECCTT---------------------------------------------------------CCCCCCCSCGGGC
T ss_pred             cCCceEcCCC---------------------------------------------------------CccccCCCCccEE
Confidence            9999865321                                                         1123457999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+..+......+     ...+..+++||.+||..||.+||
T Consensus       186 aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  265 (361)
T 2yab_A          186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL  265 (361)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             CchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCc
Confidence            9999999999999999999999999999999999999988888887554333     35578899999999999999999


Q ss_pred             ChHHHhcCCCcCCCChhhhh
Q 014344          327 GVEEIKGHEFFKGVNWELLL  346 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~~~  346 (426)
                      |+.|+|+||||++++|....
T Consensus       266 t~~e~l~hp~~~~~~~~~~~  285 (361)
T 2yab_A          266 TIQEALRHPWITPVDTQQAM  285 (361)
T ss_dssp             CHHHHHTSTTTSCSSHHHHH
T ss_pred             CHHHHhcCcCcCCCchhhhh
Confidence            99999999999999987654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=6.5e-55  Score=447.16  Aligned_cols=279  Identities=30%  Similarity=0.479  Sum_probs=240.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ..+..++|++++.||+|+||.||+|+++.+|+.||||++.+..+...          .....+..|+.+|+.++||||++
T Consensus       179 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~----------~~~~~~~~E~~iL~~l~hp~Iv~  248 (576)
T 2acx_A          179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------KGEAMALNEKQILEKVNSRFVVS  248 (576)
T ss_dssp             SCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhh----------HHHHHHHHHHHHHHHcCCCCEee
Confidence            34677899999999999999999999999999999999987655432          12456788999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ++++|.+.+.+|+|||||+||+|.+++.......+++..++.|+.||+.||+|||++||+||||||+|||++.+|++||+
T Consensus       249 l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~  328 (576)
T 2acx_A          249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRIS  328 (576)
T ss_dssp             EEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEE
Confidence            99999999999999999999999998876655569999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++..+...                                                         ......+||+.|
T Consensus       329 DFGla~~~~~~---------------------------------------------------------~~~~~~~GT~~Y  351 (576)
T 2acx_A          329 DLGLAVHVPEG---------------------------------------------------------QTIKGRVGTVGY  351 (576)
T ss_dssp             CCTTCEECCTT---------------------------------------------------------CCEECCCSCGGG
T ss_pred             ecccceecccC---------------------------------------------------------ccccccCCCccc
Confidence            99999765321                                                         112345799999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS----RKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      +|||++.+..|+.++|||||||++|||++|++||.+.+    .......+...+... ...+..+++||.+||+.||.+|
T Consensus       352 ~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R  431 (576)
T 2acx_A          352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER  431 (576)
T ss_dssp             CCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHc
Confidence            99999999999999999999999999999999998763    344555555444333 3568899999999999999999


Q ss_pred             C-----ChHHHhcCCCcCCCChhhhhhc-cCCCCCCC
Q 014344          326 I-----GVEEIKGHEFFKGVNWELLLKI-SRPPNIPA  356 (426)
Q Consensus       326 ~-----s~~eil~hp~f~~~~~~~~~~~-~~~~~~~~  356 (426)
                      |     +++||++||||++++|+.+... ..||..|.
T Consensus       432 ~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~  468 (576)
T 2acx_A          432 LGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPD  468 (576)
T ss_dssp             TTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             CCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCC
Confidence            9     7899999999999999998763 44555554

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2.2e-54  Score=442.01  Aligned_cols=281  Identities=28%  Similarity=0.521  Sum_probs=241.7

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ..+..++|++++.||+|+||+||+|+++.+|+.||||++.+......          .....+..|+.+|+.++||||++
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~----------~~~~~~~~E~~iL~~l~hp~Iv~  249 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR----------KGYQGAMVEKKILAKVHSRFIVS  249 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhh----------HHHHHHHHHHHHHHhcCCCCEee
Confidence            45778899999999999999999999999999999999987655432          13457888999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++|++...+|+|||||+||+|..++....  ...+++..++.|+.||+.||.|||++||+||||||+|||++.+|++|
T Consensus       250 l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vk  329 (543)
T 3c4z_A          250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVR  329 (543)
T ss_dssp             EEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEE
T ss_pred             EEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEE
Confidence            9999999999999999999999999887543  34699999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.+....                                                        ......+||+
T Consensus       330 L~DFGla~~~~~~~--------------------------------------------------------~~~~~~~GT~  353 (543)
T 3c4z_A          330 ISDLGLAVELKAGQ--------------------------------------------------------TKTKGYAGTP  353 (543)
T ss_dssp             ECCCTTCEECCTTC--------------------------------------------------------CCBCCCCSCT
T ss_pred             EeecceeeeccCCC--------------------------------------------------------cccccccCCc
Confidence            99999998653211                                                        1233457999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS----SRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~----~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~  323 (426)
                      .|+|||++.+..|+.++|||||||++|||++|++||.+.    ...+....++...... ...+..+.+||.+||++||.
T Consensus       354 ~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~  433 (543)
T 3c4z_A          354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPE  433 (543)
T ss_dssp             TTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred             cccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHh
Confidence            999999999999999999999999999999999999875    3455666666544333 35688999999999999999


Q ss_pred             CCCC-----hHHHhcCCCcCCCChhhhhh-ccCCCCCCCC
Q 014344          324 KRIG-----VEEIKGHEFFKGVNWELLLK-ISRPPNIPAR  357 (426)
Q Consensus       324 ~R~s-----~~eil~hp~f~~~~~~~~~~-~~~~~~~~~~  357 (426)
                      +||+     +++|++||||++++|..+.. ...||..|..
T Consensus       434 ~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P~~  473 (543)
T 3c4z_A          434 KRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS  473 (543)
T ss_dssp             GSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCCCS
T ss_pred             HCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCCCc
Confidence            9996     58999999999999999875 3456666643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.6e-53  Score=405.92  Aligned_cols=254  Identities=26%  Similarity=0.416  Sum_probs=221.5

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ...+|++++.||+|+||+||+|++..+++.||||++.....             .....+.+|+.+++.++||||+++++
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~E~~~l~~l~hp~iv~~~~   84 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-------------PKKELIINEILVMRENKNPNIVNYLD   84 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-------------SCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-------------cHHHHHHHHHHHHhcCCCCCCCeEeE
Confidence            34679999999999999999999999999999999854321             12356788999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++...+.+|+|||||+|++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg  161 (297)
T 3fxz_A           85 SYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG  161 (297)
T ss_dssp             EEEETTEEEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred             EEEECCEEEEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCC
Confidence            999999999999999999999998753   49999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        ......+||+.|+||
T Consensus       162 ~~~~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aP  185 (297)
T 3fxz_A          162 FCAQITPEQ--------------------------------------------------------SKRSTMVGTPYWMAP  185 (297)
T ss_dssp             TCEECCSTT--------------------------------------------------------CCBCCCCSCGGGCCH
T ss_pred             CceecCCcc--------------------------------------------------------cccCCccCCcCccCh
Confidence            987654211                                                        123345799999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC----CCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP----PDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      |++.+..++.++|||||||++|+|++|+.||.+.+.......+....    ......+..+.+||.+||+.||.+|||++
T Consensus       186 E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  265 (297)
T 3fxz_A          186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAK  265 (297)
T ss_dssp             HHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             hhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHH
Confidence            99999999999999999999999999999999988877666554221    12234578899999999999999999999


Q ss_pred             HHhcCCCcCC
Q 014344          330 EIKGHEFFKG  339 (426)
Q Consensus       330 eil~hp~f~~  339 (426)
                      |+++||||+.
T Consensus       266 ell~h~~~~~  275 (297)
T 3fxz_A          266 ELLQHQFLKI  275 (297)
T ss_dssp             HHTTCGGGGG
T ss_pred             HHhhChhhcc
Confidence            9999999974

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.2e-53  Score=406.83  Aligned_cols=265  Identities=26%  Similarity=0.447  Sum_probs=228.5

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|++++.||+|+||+||+|++..+++.||+|++.+......       ........+.+|+.+|+.++||||+++++++
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   83 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS-------RRGVSREDIEREVSILKEIQHPNVITLHEVY   83 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTC-------SSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccc-------cchhhHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            469999999999999999999999999999999965432111       1112356788999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC----cEEEec
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG----HIMLVD  171 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g----~ikL~D  171 (426)
                      .+...+|+|||||+|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|
T Consensus        84 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D  161 (326)
T 2y0a_A           84 ENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID  161 (326)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred             EeCCEEEEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence            9999999999999999999987643  4599999999999999999999999999999999999999887    899999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                         .....+||+.|+
T Consensus       162 fg~a~~~~~~~---------------------------------------------------------~~~~~~gt~~y~  184 (326)
T 2y0a_A          162 FGLAHKIDFGN---------------------------------------------------------EFKNIFGTPEFV  184 (326)
T ss_dssp             CTTCEECCTTS---------------------------------------------------------CCCCCCSCTTTC
T ss_pred             CCCCeECCCCC---------------------------------------------------------ccccccCCcCcC
Confidence            99997653211                                                         122346999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.......     ...+..+.+||.+||+.||.+||
T Consensus       185 aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  264 (326)
T 2y0a_A          185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM  264 (326)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             CceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCC
Confidence            9999999999999999999999999999999999998888777765433322     35578899999999999999999


Q ss_pred             ChHHHhcCCCcCCCChhhhh
Q 014344          327 GVEEIKGHEFFKGVNWELLL  346 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~~~  346 (426)
                      |+.++|+||||++.+|....
T Consensus       265 t~~e~l~hp~~~~~~~~~~~  284 (326)
T 2y0a_A          265 TIQDSLQHPWIKPKDTQQAL  284 (326)
T ss_dssp             CHHHHHHSTTTSCCSHHHHH
T ss_pred             CHHHHhcCCCccCCcchhhh
Confidence            99999999999998886553

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=5.9e-54  Score=409.59  Aligned_cols=248  Identities=20%  Similarity=0.217  Sum_probs=189.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|.+.++||+|+||+||+|++  +|+.||||++.....              .......|+..+.+++|||||++++++
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~--------------~~~~~e~Ei~~~~~l~HpNIv~l~g~~   66 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE--------------RSWFREAEIYQTVMLRHENILGFIAAD   66 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH--------------HHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch--------------hhHHHHHHHHHHhcCCCCCCCcEEEEE
Confidence            3589999999999999999986  689999999854321              111223466666788999999999999


Q ss_pred             ecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCCCCeeecc
Q 014344           96 STDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM--------GIVYRDLKPENIMIQE  163 (426)
Q Consensus        96 ~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~--------giiHrDlKp~NiLl~~  163 (426)
                      ..++    .+|||||||+||+|.++++..   .++++.+..++.|++.||+|||++        +||||||||+||||+.
T Consensus        67 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~  143 (303)
T 3hmm_A           67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK  143 (303)
T ss_dssp             EEECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred             EecCCCceEEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECC
Confidence            7653    689999999999999998753   489999999999999999999987        9999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++++||+|||+|+.......                                                    .......+
T Consensus       144 ~~~~Ki~DFGla~~~~~~~~----------------------------------------------------~~~~~~~~  171 (303)
T 3hmm_A          144 NGTCCIADLGLAVRHDSATD----------------------------------------------------TIDIAPNH  171 (303)
T ss_dssp             TSCEEECCCTTCEEEETTTT----------------------------------------------------EESCC---
T ss_pred             CCCEEEEeCCCCccccCCCC----------------------------------------------------ceeeeccc
Confidence            99999999999986532110                                                    00112345


Q ss_pred             cccCCCCccchhhcCC------CCChhhHHHHHHHHHHHHHhCCCCCCCC---------------CHHHHHHHHhcCC--
Q 014344          244 FVGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGS---------------SRKETFYRILCRP--  300 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~ell~g~~pf~~~---------------~~~~~~~~i~~~~--  300 (426)
                      .+||+.|||||++.+.      .|+.++|||||||++|||++|.+||...               ........+....  
T Consensus       172 ~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~r  251 (303)
T 3hmm_A          172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR  251 (303)
T ss_dssp             --CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             ccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCC
Confidence            6899999999999765      3578999999999999999998766322               1222222332221  


Q ss_pred             CCCCC------CCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          301 PDLVG------EPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       301 ~~~~~------~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +..+.      .+..+.+||.+||+.||++|||+.||++.
T Consensus       252 p~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          252 PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             CCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            22211      12357899999999999999999999863

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=6.7e-53  Score=422.97  Aligned_cols=255  Identities=24%  Similarity=0.414  Sum_probs=222.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|.+..+|+.||+|++.+.....           .....+.+|+.+|+.++||||+++++++
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~-----------~~~~~~~~E~~il~~l~hpnIv~l~~~~   79 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA-----------RDHQKLEREARICRLLKHPNIVRLHDSI   79 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH-----------HHHHHHHHHHHHHHHCCBTTBCCEEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH-----------HHHHHHHHHHHHHHhCCCcCCCeEEEEE
Confidence            46999999999999999999999999999999996543322           2345788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec---cCCcEEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ---ENGHIMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~---~~g~ikL~DF  172 (426)
                      .+++..|+|||||.||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+||
T Consensus        80 ~~~~~~~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DF  157 (444)
T 3soa_A           80 SEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADF  157 (444)
T ss_dssp             ECSSEEEEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCC
T ss_pred             EECCEEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccC
Confidence            9999999999999999999988764  3499999999999999999999999999999999999998   4578999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                        ......+||+.|+|
T Consensus       158 G~a~~~~~~~--------------------------------------------------------~~~~~~~gt~~Y~A  181 (444)
T 3soa_A          158 GLAIEVEGEQ--------------------------------------------------------QAWFGFAGTPGYLS  181 (444)
T ss_dssp             SSCBCCCTTC--------------------------------------------------------CBCCCSCSCGGGCC
T ss_pred             ceeEEecCCC--------------------------------------------------------ceeecccCCcccCC
Confidence            9997653211                                                        12234579999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----DLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+..+.....     .....++.+.+||.+||+.||.+|||
T Consensus       182 PE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  261 (444)
T 3soa_A          182 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT  261 (444)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCC
Confidence            9999999999999999999999999999999999998888888764432     22356889999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      +.|+|+||||+.
T Consensus       262 a~e~L~hp~~~~  273 (444)
T 3soa_A          262 AAEALKHPWISH  273 (444)
T ss_dssp             HHHHHHSCTTHH
T ss_pred             HHHHhcCccccC
Confidence            999999999964

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=4.1e-53  Score=418.30  Aligned_cols=274  Identities=18%  Similarity=0.293  Sum_probs=223.9

Q ss_pred             CCCCCCCcEEEeeeccc--CceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344           11 RSLDFSCLRIVSALGRG--AKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G--~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      -..+.++|++++.||+|  +||+||+|++..+++.||||++......           ......+.+|+.+|+.++||||
T Consensus        20 ~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~ni   88 (389)
T 3gni_B           20 FLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-----------NEMVTFLQGELHVSKLFNHPNI   88 (389)
T ss_dssp             CCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-----------HHHHHHHHHHHHHHHHCCCTTB
T ss_pred             ccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-----------hHHHHHHHHHHHHHHhCCCCCC
Confidence            34567889999999999  9999999999999999999999654321           2345678889999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++|.+++.+|+|||||+||+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.+|.+|
T Consensus        89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~k  168 (389)
T 3gni_B           89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVY  168 (389)
T ss_dssp             CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred             CcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence            99999999999999999999999999998877556699999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++..........                                                 ..........+||+
T Consensus       169 l~dfg~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~gt~  199 (389)
T 3gni_B          169 LSGLRSNLSMISHGQRQ-------------------------------------------------RVVHDFPKYSVKVL  199 (389)
T ss_dssp             ECCGGGCEECEETTEEC-------------------------------------------------SCBCCCCTTCTTTG
T ss_pred             Ecccccceeeccccccc-------------------------------------------------cccccccccccccc
Confidence            99999987553211000                                                 00011223347999


Q ss_pred             CCccchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--------------------------
Q 014344          249 EYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--------------------------  300 (426)
Q Consensus       249 ~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--------------------------  300 (426)
                      .|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......++...                          
T Consensus       200 ~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (389)
T 3gni_B          200 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANS  279 (389)
T ss_dssp             GGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------------------------
T ss_pred             cccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccc
Confidence            9999999988  678999999999999999999999998876554443332111                          


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          301 ---------------------PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       301 ---------------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                                           +.....+..+.+||.+||+.||++|||++|+|+||||+.+.|..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  344 (389)
T 3gni_B          280 GLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRA  344 (389)
T ss_dssp             --------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC---C
T ss_pred             ccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhhcc
Confidence                                 11223467799999999999999999999999999999877643

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=8e-54  Score=414.84  Aligned_cols=258  Identities=31%  Similarity=0.457  Sum_probs=220.2

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ...+++|++++.||+|+||+||+|++..+++.||||++.+......          .....+.+|+.+|+.++||||+++
T Consensus         5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hpnIv~l   74 (336)
T 3h4j_B            5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKS----------DMHMRVEREISYLKLLRHPHIIKL   74 (336)
T ss_dssp             CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCSHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccch----------hHHHHHHHHHHHHHhCCCCCCCeE
Confidence            3456889999999999999999999999999999999977654322          123578889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++.+++.+|+||||+ +|+|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        75 ~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~D  151 (336)
T 3h4j_B           75 YDVITTPTDIVMVIEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIAD  151 (336)
T ss_dssp             EEEEECSSEEEEEECCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECC
T ss_pred             EEEEEeCCEEEEEEECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEE
Confidence            99999999999999999 689988876653  499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++......                                                         ......+||+.|+
T Consensus       152 FG~s~~~~~~---------------------------------------------------------~~~~~~~gt~~y~  174 (336)
T 3h4j_B          152 FGLSNIMTDG---------------------------------------------------------NFLKTSCGSPNYA  174 (336)
T ss_dssp             SSCTBTTTTS---------------------------------------------------------BTTCCCTTSTTTS
T ss_pred             eccceeccCC---------------------------------------------------------cccccccCCcCcC
Confidence            9998765321                                                         1223457999999


Q ss_pred             cchhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          252 APEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-DLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       252 aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      |||++.+..+ +.++|||||||++|+|++|+.||.+......+..+..... .....++.+.+||++||+.||.+|||++
T Consensus       175 aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~  254 (336)
T 3h4j_B          175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQ  254 (336)
T ss_dssp             CGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             CHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            9999998876 7899999999999999999999988765444333322222 2234578899999999999999999999


Q ss_pred             HHhcCCCcCC
Q 014344          330 EIKGHEFFKG  339 (426)
Q Consensus       330 eil~hp~f~~  339 (426)
                      ||++||||+.
T Consensus       255 eil~hp~~~~  264 (336)
T 3h4j_B          255 EIRRDPWFNV  264 (336)
T ss_dssp             HHTTCHHHHT
T ss_pred             HHHhChhhcc
Confidence            9999999974

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=4.4e-53  Score=405.61  Aligned_cols=260  Identities=26%  Similarity=0.432  Sum_probs=214.5

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      -.++|++++.||+|+||+||+|++. +++.||+|++.....           .......+.+|+.+|+.++||||+++++
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~hp~iv~~~~   86 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-----------DEGIPSTAIREISLLKELHHPNIVSLID   86 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-----------------CHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-----------cchhhHHHHHHHHHHHHcCCCCEeeeee
Confidence            3577999999999999999999985 589999999854321           1123467888999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.++..+|+|||||. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  164 (311)
T 3niz_A           87 VIHSERCLTLVFEFME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFG  164 (311)
T ss_dssp             EECCSSCEEEEEECCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             EEccCCEEEEEEcCCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCc
Confidence            9999999999999998 57877766543 459999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        ......+||+.|+||
T Consensus       165 ~a~~~~~~~--------------------------------------------------------~~~~~~~~t~~y~aP  188 (311)
T 3niz_A          165 LARAFGIPV--------------------------------------------------------RSYTHEVVTLWYRAP  188 (311)
T ss_dssp             TCEETTSCC--------------------------------------------------------C---CCCCCCTTCCH
T ss_pred             CceecCCCc--------------------------------------------------------ccccCCcccCCcCCH
Confidence            997653211                                                        112234689999999


Q ss_pred             hhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCCCC---------------------------
Q 014344          254 EIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD---------------------------  302 (426)
Q Consensus       254 E~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~~---------------------------  302 (426)
                      |++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.   ..+..                           
T Consensus       189 E~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (311)
T 3niz_A          189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS  268 (311)
T ss_dssp             HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHH
T ss_pred             HHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHH
Confidence            99987 568999999999999999999999998877665554443   11110                           


Q ss_pred             -CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          303 -LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       303 -~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                       ....+.++.+||.+||++||++|||++|+|+||||+++++.
T Consensus       269 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  310 (311)
T 3niz_A          269 IIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQ  310 (311)
T ss_dssp             HSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCTT
T ss_pred             hCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCcc
Confidence             11346788999999999999999999999999999987753

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-53  Score=409.35  Aligned_cols=253  Identities=22%  Similarity=0.352  Sum_probs=223.4

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|.+..+++.||+|++....              .....+.+|+.+|+.++||||++++++
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--------------~~~~~~~~E~~~l~~l~hpnIv~~~~~   69 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--------------TDQVLVKKEISILNIARHRNILHLHES   69 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--------------HHHHHHHHHHHHHHHSCCTTBCCEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--------------ccHHHHHHHHHHHHhCCCCCCCeEeEE
Confidence            357999999999999999999999999999999984321              223467889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc--CCcEEEecc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE--NGHIMLVDF  172 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~--~g~ikL~DF  172 (426)
                      +.+.+.+|+|||||+|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+||
T Consensus        70 ~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Df  148 (321)
T 1tki_A           70 FESMEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEF  148 (321)
T ss_dssp             EEETTEEEEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred             EecCCEEEEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEEC
Confidence            999999999999999999999876432 45999999999999999999999999999999999999997  789999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+...                                                         ......+||+.|+|
T Consensus       149 g~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~a  171 (321)
T 1tki_A          149 GQARQLKPG---------------------------------------------------------DNFRLLFTAPEYYA  171 (321)
T ss_dssp             TTCEECCTT---------------------------------------------------------CEEEEEESCGGGSC
T ss_pred             CCCeECCCC---------------------------------------------------------CccccccCChhhcC
Confidence            999866321                                                         12234579999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+......+     ...+..+.+||.+||..||.+|||
T Consensus       172 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt  251 (321)
T 1tki_A          172 PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT  251 (321)
T ss_dssp             HHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             cHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcC
Confidence            999999889999999999999999999999999999888888877554433     256889999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      +.|+|+||||+.
T Consensus       252 ~~e~l~hp~~~~  263 (321)
T 1tki_A          252 ASEALQHPWLKQ  263 (321)
T ss_dssp             HHHHHHSHHHHS
T ss_pred             HHHHhcChhhcc
Confidence            999999999975

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-52  Score=414.71  Aligned_cols=277  Identities=28%  Similarity=0.438  Sum_probs=210.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~   93 (426)
                      +++|++++.||+|+||+||+|.+..+++.||||++.+..           .......++.+|+.+|+.+. ||||+++++
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-----------~~~~~~~~~~~E~~~l~~l~~h~niv~l~~   76 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-----------QNSTDAQRTFREIMILTELSGHENIVNLLN   76 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC-------------CCHHHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-----------cChHHHHHHHHHHHHHHhccCCCCCCeeee
Confidence            467999999999999999999999999999999985432           12234567788999999997 999999999


Q ss_pred             eeecCC--eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           94 VLSTDK--FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        94 ~~~~~~--~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++..++  .+|+|||||. ++|..++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        77 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~D  152 (388)
T 3oz6_A           77 VLRADNDRDVYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVAD  152 (388)
T ss_dssp             EEECTTSSCEEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             EEecCCCCEEEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecC
Confidence            997544  7999999997 689888765   3499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+.+.............                                   ..................+||+.|+
T Consensus       153 FG~a~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~gt~~y~  197 (388)
T 3oz6_A          153 FGLSRSFVNIRRVTNNIPLS-----------------------------------INENTENFDDDQPILTDYVATRWYR  197 (388)
T ss_dssp             CTTCEESSSCCCCCCCGGGC-----------------------------------CC---------------CCCGGGGC
T ss_pred             Cccccccccccccccccccc-----------------------------------ccccccccccccccccCCcccCCcC
Confidence            99998764321110000000                                   0000000011123345678999999


Q ss_pred             cchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC--------------------------
Q 014344          252 APEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP--------------------------  301 (426)
Q Consensus       252 aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~--------------------------  301 (426)
                      |||++.+ ..|+.++|||||||++|||++|++||.+.+...++.+++.   .+.                          
T Consensus       198 aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (388)
T 3oz6_A          198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIR  277 (388)
T ss_dssp             CHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC--
T ss_pred             CHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCccccccc
Confidence            9999987 6789999999999999999999999999988877766642   110                          


Q ss_pred             -------------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          302 -------------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       302 -------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                                         .....++.+.+||.+||+.||.+|||++|+|+||||+...
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          278 QSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             ---CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             CCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence                               0114578899999999999999999999999999998754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=7.1e-53  Score=411.01  Aligned_cols=262  Identities=24%  Similarity=0.407  Sum_probs=220.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      -++|++++.||+|+||+||+|+++.+++.||||++.+......        .....+.+.+|+.+|+.++||||++++++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--------~~~~~~~~~~E~~~l~~l~hpnIv~~~~~   94 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS--------PGLSTEDLKREASICHMLKHPHIVELLET   94 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTS--------SSCCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcccc--------ccchHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            3569999999999999999999999999999999976543221        11234678889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc---EEE
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH---IML  169 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~---ikL  169 (426)
                      +.+++.+|+|||||+|++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||
T Consensus        95 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl  174 (351)
T 3c0i_A           95 YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKL  174 (351)
T ss_dssp             EEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEE
T ss_pred             EEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEE
Confidence            99999999999999999998876543  2345899999999999999999999999999999999999987654   999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                        ......+||+.
T Consensus       175 ~Dfg~a~~~~~~~--------------------------------------------------------~~~~~~~gt~~  198 (351)
T 3c0i_A          175 GGFGVAIQLGESG--------------------------------------------------------LVAGGRVGTPH  198 (351)
T ss_dssp             CCCTTCEECCTTS--------------------------------------------------------CBCCCCCSCGG
T ss_pred             ecCcceeEecCCC--------------------------------------------------------eeecCCcCCcC
Confidence            9999997653211                                                        11234579999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~  324 (426)
                      |+|||++.+..++.++|||||||++|+|++|+.||.+.. .+.+..+.......     ...+..+.+||.+||+.||++
T Consensus       199 y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  277 (351)
T 3c0i_A          199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAE  277 (351)
T ss_dssp             GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             ccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhH
Confidence            999999999999999999999999999999999998754 44555554433222     356788999999999999999


Q ss_pred             CCChHHHhcCCCcCCCC
Q 014344          325 RIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       325 R~s~~eil~hp~f~~~~  341 (426)
                      |||+.++|+||||++.+
T Consensus       278 R~s~~e~l~hp~~~~~~  294 (351)
T 3c0i_A          278 RITVYEALNHPWLKERD  294 (351)
T ss_dssp             SCCHHHHHTSHHHHTHH
T ss_pred             CcCHHHHhcChhhcCCc
Confidence            99999999999998643

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.2e-52  Score=396.74  Aligned_cols=257  Identities=26%  Similarity=0.439  Sum_probs=213.4

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|++..+++.||||++....           ........+.+|+.+++.++||||++++++
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   69 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-----------DDEGVPSSALREICLLKELKHKNIVRLHDV   69 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-----------SSTTHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC-----------CcCCcchHHHHHHHHHhcCCCCCEeeEEeE
Confidence            468999999999999999999999999999999995432           122345678889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.+++.+|+|||||.| +|.+++... .+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        70 ~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~  147 (292)
T 3o0g_A           70 LHSDKKLTLVFEFCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGL  147 (292)
T ss_dssp             EEETTEEEEEEECCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEeCCEEEEEEecCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence            9999999999999975 555555443 34599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        ......+||+.|+|||
T Consensus       148 ~~~~~~~~--------------------------------------------------------~~~~~~~~t~~y~aPE  171 (292)
T 3o0g_A          148 ARAFGIPV--------------------------------------------------------RCYSAEVVTLWYRPPD  171 (292)
T ss_dssp             CEECCSCC--------------------------------------------------------SCCCSCCSCGGGCCHH
T ss_pred             ceecCCcc--------------------------------------------------------ccccCCccccCCcChH
Confidence            97653211                                                        1123346899999999


Q ss_pred             hhcCCC-CChhhHHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHhc---CCC---------------------------C
Q 014344          255 IIEGKG-HDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRILC---RPP---------------------------D  302 (426)
Q Consensus       255 ~~~~~~-~~~~~DiwSlG~il~ell~g~~p-f~~~~~~~~~~~i~~---~~~---------------------------~  302 (426)
                      ++.+.. ++.++|||||||++|+|++|..| |.+.+..+....+..   .+.                           .
T Consensus       172 ~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (292)
T 3o0g_A          172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV  251 (292)
T ss_dssp             HHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTT
T ss_pred             HHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhc
Confidence            998765 79999999999999999987766 566666666555431   110                           0


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ....+..+++||.+||+.||++|||++|+|+||||+++
T Consensus       252 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             STTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             ccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence            11346789999999999999999999999999999863

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.1e-52  Score=411.17  Aligned_cols=254  Identities=25%  Similarity=0.443  Sum_probs=221.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|.+..+++.||+|++......           ......+.+|+.+|+.++||||+++++++
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------~~~~~~~~~E~~il~~l~hpnIv~~~~~~   97 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-----------ARDFQKLEREARICRKLQHPNIVRLHDSI   97 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----------HHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-----------HHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            4699999999999999999999999999999999654321           22456788999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC---CcEEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN---GHIMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~---g~ikL~DF  172 (426)
                      .+++..|+|||||.||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+||+||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df  175 (362)
T 2bdw_A           98 QEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF  175 (362)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCC
T ss_pred             EeCCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeec
Confidence            9999999999999999999887643  459999999999999999999999999999999999999865   45999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++......                                                         ......+||+.|+|
T Consensus       176 G~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~a  198 (362)
T 2bdw_A          176 GLAIEVNDS---------------------------------------------------------EAWHGFAGTPGYLS  198 (362)
T ss_dssp             TTCBCCTTC---------------------------------------------------------CSCCCSCSCTTTCC
T ss_pred             CcceEecCC---------------------------------------------------------cccccCCCCccccC
Confidence            998765321                                                         11234579999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+..+.......     ...+..+.+||.+||+.||.+|||
T Consensus       199 PE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  278 (362)
T 2bdw_A          199 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT  278 (362)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcC
Confidence            999999999999999999999999999999999999888887776543322     245788999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      +.++|+||||+.
T Consensus       279 ~~e~l~hp~~~~  290 (362)
T 2bdw_A          279 ADQALKVPWICN  290 (362)
T ss_dssp             HHHHTTSHHHHT
T ss_pred             HHHHhcCcccCC
Confidence            999999999964

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1e-52  Score=398.36  Aligned_cols=256  Identities=26%  Similarity=0.421  Sum_probs=212.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|++ .+++.||+|++......           ......+.+|+.+++.++||||++++++
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~   68 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED-----------EGIPSTTIREISILKELKHSNIVKLYDV   68 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGG-----------GCCCHHHHHHHHGGGGCCCTTBCCEEEE
T ss_pred             CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccc-----------cccchhHHHHHHHHHhcCCCCEeeeeeE
Confidence            46899999999999999999998 67899999998543211           1123567789999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.+++.+|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+
T Consensus        69 ~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  146 (288)
T 1ob3_A           69 IHTKKRLVLVFEHLD-QDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGL  146 (288)
T ss_dssp             EECSSCEEEEEECCS-EEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred             EccCCeEEEEEEecC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECcc
Confidence            999999999999997 58888876543 4599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        ......+||+.|+|||
T Consensus       147 ~~~~~~~~--------------------------------------------------------~~~~~~~~t~~y~aPE  170 (288)
T 1ob3_A          147 ARAFGIPV--------------------------------------------------------RKYTHEIVTLWYRAPD  170 (288)
T ss_dssp             HHHHCC-----------------------------------------------------------------CCCTTCCHH
T ss_pred             ccccCccc--------------------------------------------------------cccccccccccccCch
Confidence            87653110                                                        1122346899999999


Q ss_pred             hhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC---------------------------CC
Q 014344          255 IIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP---------------------------DL  303 (426)
Q Consensus       255 ~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~---------------------------~~  303 (426)
                      ++.+. .++.++|||||||++|+|++|++||.+.+..+...++..   .+.                           ..
T Consensus       171 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (288)
T 1ob3_A          171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL  250 (288)
T ss_dssp             HHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTC
T ss_pred             heeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHh
Confidence            99764 589999999999999999999999999888776665532   110                           01


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      .+.+..+.+||.+||+.||++|||++|+++||||++.
T Consensus       251 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             hhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            2357789999999999999999999999999999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=4.4e-53  Score=408.76  Aligned_cols=264  Identities=24%  Similarity=0.370  Sum_probs=213.1

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .....+++|++++.||+|+||+||+|++..+++.||||++......           ......+.+|+.+|+.++||||+
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~~iv   96 (329)
T 3gbz_A           28 PSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-----------EGVPGTAIREVSLLKELQHRNII   96 (329)
T ss_dssp             ----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-------------------CHHHHHHGGGCCCTTBC
T ss_pred             CcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc-----------cccchhHHHHHHHHHHcCCCCcc
Confidence            3456778999999999999999999999999999999998543211           12344567899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec-----cC
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ-----EN  164 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~-----~~  164 (426)
                      ++++++.++..+|+|||||. ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++     ..
T Consensus        97 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~  173 (329)
T 3gbz_A           97 ELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASET  173 (329)
T ss_dssp             CEEEEEEETTEEEEEEECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----C
T ss_pred             eEEEEEecCCEEEEEEecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCcc
Confidence            99999999999999999997 59999887653  499999999999999999999999999999999999994     45


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||++..+....                                                        ......
T Consensus       174 ~~~kl~Dfg~a~~~~~~~--------------------------------------------------------~~~~~~  197 (329)
T 3gbz_A          174 PVLKIGDFGLARAFGIPI--------------------------------------------------------RQFTHE  197 (329)
T ss_dssp             CEEEECCTTHHHHHC-----------------------------------------------------------------
T ss_pred             ceEEECcCCCccccCCcc--------------------------------------------------------cccCCC
Confidence            569999999997653211                                                        112334


Q ss_pred             ccCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCC--C--------------
Q 014344          245 VGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL--V--------------  304 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~~~--~--------------  304 (426)
                      +||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+...   +...  .              
T Consensus       198 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (329)
T 3gbz_A          198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPK  277 (329)
T ss_dssp             --CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred             cCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhh
Confidence            689999999999874 4899999999999999999999999999887776665421   1100  0              


Q ss_pred             ------------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          305 ------------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       305 ------------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                                  ..+..+.+||.+||+.||.+|||++|+|+||||++.+|+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          278 FRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD  328 (329)
T ss_dssp             CCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCSC
T ss_pred             hccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCCC
Confidence                        046788999999999999999999999999999999885

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.5e-52  Score=403.00  Aligned_cols=262  Identities=23%  Similarity=0.367  Sum_probs=205.5

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|++..+++.||+|++....            .......+.+|+.+|+.++||||++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   71 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS------------EEGTPSTAIREISLMKELKHENIVRLYDV   71 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCS------------TTCSCHHHHHHHHHHTTCCBTTBCCEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc------------ccccHHHHHHHHHHHHhcCCCCcceEEEE
Confidence            467999999999999999999999999999999985432            11223567789999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQS----EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~----~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +.+++.+|+|||||. ++|.+++....    ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+
T Consensus        72 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~  150 (317)
T 2pmi_A           72 IHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLG  150 (317)
T ss_dssp             ECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             EEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEEC
Confidence            999999999999998 68998876543    2358999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++.......                                                        ......+||+.|
T Consensus       151 Dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~t~~y  174 (317)
T 2pmi_A          151 DFGLARAFGIPV--------------------------------------------------------NTFSSEVVTLWY  174 (317)
T ss_dssp             CCSSCEETTSCC--------------------------------------------------------CCCCCCCSCCTT
T ss_pred             cCccceecCCCc--------------------------------------------------------ccCCCCcccccc
Confidence            999997653211                                                        112234689999


Q ss_pred             ccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC-------------------------
Q 014344          251 VAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP-------------------------  301 (426)
Q Consensus       251 ~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~-------------------------  301 (426)
                      +|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+..   .+.                         
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (317)
T 2pmi_A          175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDL  254 (317)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCS
T ss_pred             cCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhH
Confidence            99999987 4689999999999999999999999999988777665531   110                         


Q ss_pred             -------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhhh
Q 014344          302 -------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       302 -------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~~  345 (426)
                             .....+..+.+||.+||+.||++|||++|+|+||||++..|...
T Consensus       255 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  305 (317)
T 2pmi_A          255 RQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHAS  305 (317)
T ss_dssp             HHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC---
T ss_pred             HHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchhh
Confidence                   01134678999999999999999999999999999988766543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.1e-52  Score=398.75  Aligned_cols=263  Identities=28%  Similarity=0.381  Sum_probs=214.2

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC---CCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE---HPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~   87 (426)
                      ..+..++|++++.||+|+||+||+|++..+++.||||++.......        ........+.+|+.+++.+.   |||
T Consensus         4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~~~~~~e~~~l~~l~~~~h~n   75 (308)
T 3g33_A            4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGG--------GGGGLPISTVREVALLRRLEAFEHPN   75 (308)
T ss_dssp             ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCT--------TSSCCCHHHHHHHHHHHHHHHHCCTT
T ss_pred             CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccc--------cccccchhHHHHHHHHHHHhhcCCCC
Confidence            3455667999999999999999999999999999999985432111        11112235566777777664   999


Q ss_pred             cceeeeeeecCC-----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec
Q 014344           88 LPRLRGVLSTDK-----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ  162 (426)
Q Consensus        88 iv~l~~~~~~~~-----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~  162 (426)
                      |+++++++....     .+++||||+. ++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus        76 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~  154 (308)
T 3g33_A           76 VVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT  154 (308)
T ss_dssp             BCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC
T ss_pred             eEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc
Confidence            999999997765     5899999997 6999998876656699999999999999999999999999999999999999


Q ss_pred             cCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          163 ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       163 ~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                      .++.+||+|||++......                                                         ....
T Consensus       155 ~~~~~kl~Dfg~a~~~~~~---------------------------------------------------------~~~~  177 (308)
T 3g33_A          155 SGGTVKLADFGLARIYSYQ---------------------------------------------------------MALT  177 (308)
T ss_dssp             TTSCEEECSCSCTTTSTTC---------------------------------------------------------CCSG
T ss_pred             CCCCEEEeeCccccccCCC---------------------------------------------------------cccC
Confidence            9999999999998765321                                                         1223


Q ss_pred             ccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC-----------------
Q 014344          243 SFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD-----------------  302 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~-----------------  302 (426)
                      ..+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+...++..   .++.                 
T Consensus       178 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (308)
T 3g33_A          178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPR  257 (308)
T ss_dssp             GGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCC
T ss_pred             CccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCC
Confidence            45799999999999999999999999999999999999999999998877766642   1110                 


Q ss_pred             --------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 --------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 --------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                              ....+..+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~  302 (308)
T 3g33_A          258 GPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK  302 (308)
T ss_dssp             CCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred             CCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence                    1234678899999999999999999999999999975

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.4e-52  Score=404.90  Aligned_cols=282  Identities=38%  Similarity=0.692  Sum_probs=230.4

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp   86 (426)
                      ..+.+++|++++.||+|+||+||+|++.   .+++.||||++.+......         ......+..|+.+|+.+ .||
T Consensus        49 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~~h~  119 (355)
T 1vzo_A           49 EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK---------AKTTEHTRTERQVLEHIRQSP  119 (355)
T ss_dssp             CCCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE---------ESSGGGCCCHHHHHHHHHTCT
T ss_pred             ccccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhh---------hhHHHHHHHHHHHHHHccCCC
Confidence            4567789999999999999999999985   5899999999865432111         11223455699999999 699


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++..+..+|+|||||+|++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus       120 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  197 (355)
T 1vzo_A          120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH  197 (355)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC
T ss_pred             ceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCc
Confidence            99999999999999999999999999999987653  4999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||+++.+....                                                       .......+|
T Consensus       198 ~kl~DfG~a~~~~~~~-------------------------------------------------------~~~~~~~~g  222 (355)
T 1vzo_A          198 VVLTDFGLSKEFVADE-------------------------------------------------------TERAYDFCG  222 (355)
T ss_dssp             EEESCSSEEEECCGGG-------------------------------------------------------GGGGCGGGS
T ss_pred             EEEeeCCCCeecccCC-------------------------------------------------------CCcccCccc
Confidence            9999999997653110                                                       112335679


Q ss_pred             CCCCccchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcC-CCCCCCCCHHHHHHHHHHhc
Q 014344          247 TEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSS----RKETFYRILCR-PPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       247 t~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~~~~i~~~-~~~~~~~~~~~~~li~~~L~  319 (426)
                      |+.|+|||++.+  ..++.++|||||||++|+|++|+.||....    .......+... ++.....+..+.+||.+||.
T Consensus       223 t~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  302 (355)
T 1vzo_A          223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLM  302 (355)
T ss_dssp             CCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhh
Confidence            999999999986  347899999999999999999999997543    33444444433 33344668889999999999


Q ss_pred             cCCCCCC-----ChHHHhcCCCcCCCChhhhhhccCCCCCCCCC
Q 014344          320 KDPTKRI-----GVEEIKGHEFFKGVNWELLLKISRPPNIPARF  358 (426)
Q Consensus       320 ~dP~~R~-----s~~eil~hp~f~~~~~~~~~~~~~~~~~~~~~  358 (426)
                      .||.+||     +++++++||||+.++|+.+.....|+...+..
T Consensus       303 ~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~~p~~p~~  346 (355)
T 1vzo_A          303 KDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVI  346 (355)
T ss_dssp             SSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             hCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCCCCCCCcc
Confidence            9999999     99999999999999999987766555544443

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2e-52  Score=422.46  Aligned_cols=261  Identities=27%  Similarity=0.399  Sum_probs=229.7

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+.+++|++++.||+|+||+||+|++..+|+.||||++.+......          .....+.+|+.+|+.++||||+
T Consensus        10 ~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~----------~~~~~~~~Ei~~l~~l~HpnIv   79 (476)
T 2y94_A           10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSL----------DVVGKIRREIQNLKLFRHPHII   79 (476)
T ss_dssp             CSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHT----------TTHHHHHHHHHHHTTCCCTTBC
T ss_pred             CCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH----------HHHHHHHHHHHHHHhCCCCCCC
Confidence            456788999999999999999999999999999999999977544321          2346788999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.+.+.+|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        80 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL  157 (476)
T 2y94_A           80 KLYQVISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKI  157 (476)
T ss_dssp             CEEEEEECSSEEEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEE
T ss_pred             cEEEEEEECCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEE
Confidence            9999999999999999999999999987643  45999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++......                                                         ....+.+||+.
T Consensus       158 ~DFG~a~~~~~~---------------------------------------------------------~~~~~~~gt~~  180 (476)
T 2y94_A          158 ADFGLSNMMSDG---------------------------------------------------------EFLRTSCGSPN  180 (476)
T ss_dssp             CCCSSCEECCTT---------------------------------------------------------CCBCCCCSCST
T ss_pred             Eeccchhhcccc---------------------------------------------------------ccccccCCCcC
Confidence            999999765321                                                         12234579999


Q ss_pred             CccchhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          250 YVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       250 y~aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      |+|||++.+..+ +.++|||||||++|+|++|+.||.+.+....+.++....... ...++.+.+||.+||+.||.+|||
T Consensus       181 y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt  260 (476)
T 2y94_A          181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRAT  260 (476)
T ss_dssp             TCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             eEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcC
Confidence            999999998776 789999999999999999999999988888888877554333 345789999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      +++|++||||+.
T Consensus       261 ~~eil~hp~~~~  272 (476)
T 2y94_A          261 IKDIREHEWFKQ  272 (476)
T ss_dssp             HHHHHTCHHHHT
T ss_pred             HHHHHhCHHhhh
Confidence            999999999975

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.8e-52  Score=398.58  Aligned_cols=270  Identities=26%  Similarity=0.441  Sum_probs=216.4

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhh-------------cccCCCchhhHHHHHH
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE-------------LTNNDNGDKYRRISFE   76 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~E   76 (426)
                      ...+.+++|++++.||+|+||+||+|++..+++.||||++.+.........             ..........+.+.+|
T Consensus         7 ~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   86 (298)
T 2zv2_A            7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE   86 (298)
T ss_dssp             ---CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHH
T ss_pred             CCceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence            345678899999999999999999999999999999999976543221100             0000111234678899


Q ss_pred             HHHHHhcCCCCcceeeeeeec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCC
Q 014344           77 QRVLRNVEHPLLPRLRGVLST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDL  154 (426)
Q Consensus        77 ~~il~~l~hp~iv~l~~~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDl  154 (426)
                      +.+|+.++||||+++++++.+  ...+|+|||||++++|.++..   ...+++..++.++.||+.||.|||++||+||||
T Consensus        87 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  163 (298)
T 2zv2_A           87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI  163 (298)
T ss_dssp             HHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            999999999999999999986  678999999999999987643   345999999999999999999999999999999


Q ss_pred             CCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          155 KPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSD  234 (426)
Q Consensus       155 Kp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (426)
                      ||+|||++.++.+||+|||++..+....                                                    
T Consensus       164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------  191 (298)
T 2zv2_A          164 KPSNLLVGEDGHIKIADFGVSNEFKGSD----------------------------------------------------  191 (298)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECSSSS----------------------------------------------------
T ss_pred             CHHHEEECCCCCEEEecCCCcccccccc----------------------------------------------------
Confidence            9999999999999999999997653211                                                    


Q ss_pred             CCCCCCccccccCCCCccchhhcCCC---CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCH
Q 014344          235 SDSSEKSNSFVGTEEYVAPEIIEGKG---HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPT  308 (426)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~  308 (426)
                          ......+||+.|+|||++.+..   ++.++|||||||++|+|++|+.||.+.........+.....   .....+.
T Consensus       192 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (298)
T 2zv2_A          192 ----ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAE  267 (298)
T ss_dssp             ----CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCH
T ss_pred             ----ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCH
Confidence                1122346999999999998765   37899999999999999999999999887776666654332   2345688


Q ss_pred             HHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       309 ~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                      .+.+||.+||+.||++|||+.|+++||||+
T Consensus       268 ~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          268 DLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            999999999999999999999999999985

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=5e-52  Score=419.26  Aligned_cols=289  Identities=24%  Similarity=0.356  Sum_probs=204.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.+..           ......+++.+|+.+|+.++||||+++++++
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-----------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  121 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-----------EDLIDCKRILREIAILNRLNHDHVVKVLDIV  121 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTT-----------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-----------cCHHHHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            67999999999999999999999999999999985431           1223456788999999999999999999999


Q ss_pred             e-----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           96 S-----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        96 ~-----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      .     ....+|+||||+ +++|..++...  ..+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+
T Consensus       122 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~  198 (458)
T 3rp9_A          122 IPKDVEKFDELYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVC  198 (458)
T ss_dssp             CCSCTTTCCCEEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEEC
T ss_pred             ecCCcccCceEEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeec
Confidence            4     346799999998 58899887643  459999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+++.................                 ......            ................+||+.|
T Consensus       199 DFGla~~~~~~~~~~~~~~~~~~-----------------~~~~~~------------~~~~~~~~~~~~~~~~~gt~~Y  249 (458)
T 3rp9_A          199 DFGLARTVDYPENGNSQLPISPR-----------------EDDMNL------------VTFPHTKNLKRQLTGHVVTRWY  249 (458)
T ss_dssp             CCTTCBCTTSCTTCCCCCC--------------------------------------------------------CCCTT
T ss_pred             ccccchhccCccccccccccCcc-----------------cccccc------------ccccccccccccccCCcccccc
Confidence            99999876432211000000000                 000000            0000000112345567899999


Q ss_pred             ccchhh-cCCCCChhhHHHHHHHHHHHHHh-----------CCCCCCCCCH--------------------HHHHHHH--
Q 014344          251 VAPEII-EGKGHDFAVDWWSLGVVLHEMLY-----------GATPFRGSSR--------------------KETFYRI--  296 (426)
Q Consensus       251 ~aPE~~-~~~~~~~~~DiwSlG~il~ell~-----------g~~pf~~~~~--------------------~~~~~~i--  296 (426)
                      +|||++ .+..|+.++|||||||++|||++           |+++|.+.+.                    ..++..+  
T Consensus       250 ~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  329 (458)
T 3rp9_A          250 RAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFN  329 (458)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHH
T ss_pred             cChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHH
Confidence            999986 56679999999999999999998           7888877542                    1122111  


Q ss_pred             -hcCCC-----------------------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhhhh
Q 014344          297 -LCRPP-----------------------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLL  346 (426)
Q Consensus       297 -~~~~~-----------------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~~~  346 (426)
                       +..++                             .+...+..+.+||.+||+.||.+|||++|+|+||||++++|....
T Consensus       330 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~~e  409 (458)
T 3rp9_A          330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVE  409 (458)
T ss_dssp             HHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGGGC
T ss_pred             HcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCccC
Confidence             11110                             123457889999999999999999999999999999999988764


Q ss_pred             h
Q 014344          347 K  347 (426)
Q Consensus       347 ~  347 (426)
                      .
T Consensus       410 ~  410 (458)
T 3rp9_A          410 T  410 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=6.4e-52  Score=390.80  Aligned_cols=259  Identities=31%  Similarity=0.507  Sum_probs=226.0

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      +.+.+++|++++.||+|+||+||+|.+..+++.||+|++.+......          .....+.+|+.+++.++||||++
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~   73 (279)
T 3fdn_A            4 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA----------GVEHQLRREVEIQSHLRHPNILR   73 (279)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHH----------TCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ceeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchh----------hHHHHHHHHHHHHHcCCCCCCcc
Confidence            46788999999999999999999999999999999999977554332          12456888999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++.+....|+||||+++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~  151 (279)
T 3fdn_A           74 LYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA  151 (279)
T ss_dssp             EEEEEECSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEEC
T ss_pred             hhheEecCCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEE
Confidence            9999999999999999999999999887653  49999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++......                                                          .....+||+.|
T Consensus       152 Dfg~~~~~~~~----------------------------------------------------------~~~~~~~~~~y  173 (279)
T 3fdn_A          152 DFGWSVHAPSS----------------------------------------------------------RRTDLCGTLDY  173 (279)
T ss_dssp             SCCEESCC------------------------------------------------------------------CCCCTT
T ss_pred             eccccccCCcc----------------------------------------------------------cccccCCCCCc
Confidence            99988543211                                                          12234689999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      +|||++.+..++.++|||||||++|+|++|..||...+..+....+....... ...+..+.+||.+||..||.+|||++
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  253 (279)
T 3fdn_A          174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR  253 (279)
T ss_dssp             CCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             cCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHH
Confidence            99999999999999999999999999999999999999888877776544333 34678899999999999999999999


Q ss_pred             HHhcCCCcCC
Q 014344          330 EIKGHEFFKG  339 (426)
Q Consensus       330 eil~hp~f~~  339 (426)
                      ||++||||+.
T Consensus       254 e~l~h~~~~~  263 (279)
T 3fdn_A          254 EVLEHPWITA  263 (279)
T ss_dssp             HHHHCHHHHH
T ss_pred             HHhhCccccC
Confidence            9999999964

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=9.5e-52  Score=397.90  Aligned_cols=265  Identities=28%  Similarity=0.441  Sum_probs=229.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||+|++.+......       ........+.+|+.+|+.+.||||+++++++
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   84 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRAS-------RRGVSREEIEREVSILRQVLHHNVITLHDVY   84 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSC-------SSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEeccccccc-------ccchhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            469999999999999999999999999999999965432111       1112356788999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC----cEEEec
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG----HIMLVD  171 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g----~ikL~D  171 (426)
                      .+...+|+|||||+|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~D  162 (321)
T 2a2a_A           85 ENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLID  162 (321)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred             ecCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEcc
Confidence            9999999999999999999998653  4589999999999999999999999999999999999999888    899999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                         .....+||+.|+
T Consensus       163 fg~~~~~~~~~---------------------------------------------------------~~~~~~gt~~y~  185 (321)
T 2a2a_A          163 FGLAHEIEDGV---------------------------------------------------------EFKNIFGTPEFV  185 (321)
T ss_dssp             CTTCEECCTTC---------------------------------------------------------CCCCCCSCGGGC
T ss_pred             CccceecCccc---------------------------------------------------------cccccCCCCCcc
Confidence            99987653211                                                         122346999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..++.++|||||||++|+|++|..||.+.+..+....+.......     ...+..+.+||.+||..||.+||
T Consensus       186 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  265 (321)
T 2a2a_A          186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL  265 (321)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSC
T ss_pred             CcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCc
Confidence            9999999999999999999999999999999999998888877776543332     35678899999999999999999


Q ss_pred             ChHHHhcCCCcCCCChhhhh
Q 014344          327 GVEEIKGHEFFKGVNWELLL  346 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~~~  346 (426)
                      |++|+++||||+.++|....
T Consensus       266 s~~e~l~hp~~~~~~~~~~~  285 (321)
T 2a2a_A          266 TIQEALRHPWITPVDNQQAM  285 (321)
T ss_dssp             CHHHHHHSTTTSCSSHHHHH
T ss_pred             CHHHHhcCccccCCCccccc
Confidence            99999999999999887654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=8e-52  Score=396.15  Aligned_cols=261  Identities=26%  Similarity=0.437  Sum_probs=214.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|++..+++.||||++....           ......+.+.+|+.+++.++||||++++++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   70 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-----------DDPVIKKIALREIRMLKQLKHPNLVNLLEV   70 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-----------C-HHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-----------cchHHHHHHHHHHHHHHhCCCCCccchhhe
Confidence            467999999999999999999999999999999984432           122345677889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +...+..++|||||++++|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        71 ~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  148 (311)
T 4agu_A           71 FRRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGF  148 (311)
T ss_dssp             EEETTEEEEEEECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             eecCCeEEEEEEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence            99999999999999999999886643  4499999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        ......+||+.|+|||
T Consensus       149 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE  172 (311)
T 4agu_A          149 ARLLTGPS--------------------------------------------------------DYYDDEVATRWYRSPE  172 (311)
T ss_dssp             CEECC--------------------------------------------------------------------GGGCCHH
T ss_pred             chhccCcc--------------------------------------------------------cccCCCcCCccccChH
Confidence            97653211                                                        1122346899999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----------------------CCC---------
Q 014344          255 IIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----------------------PPD---------  302 (426)
Q Consensus       255 ~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~----------------------~~~---------  302 (426)
                      ++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+...                      .+.         
T Consensus       173 ~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (311)
T 4agu_A          173 LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLEL  252 (311)
T ss_dssp             HHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHH
T ss_pred             HHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhh
Confidence            9986 66899999999999999999999999998877665443210                      000         


Q ss_pred             -CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          303 -LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       303 -~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                       ....+..+.+||.+||..||.+|||++|+++||||+++.+..
T Consensus       253 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  295 (311)
T 4agu_A          253 KFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE  295 (311)
T ss_dssp             HCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC---
T ss_pred             hcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHH
Confidence             124577899999999999999999999999999999887654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.7e-52  Score=421.36  Aligned_cols=252  Identities=25%  Similarity=0.445  Sum_probs=208.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++.+...           .....+++.+|+.+|+.++||||++++++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~hpnIv~l~~~  129 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-----------NQTHAKRAYRELVLMKCVNHKNIISLLNV  129 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-----------SHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-----------ChHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            4689999999999999999999999999999999965421           12345678899999999999999999999


Q ss_pred             eecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      |...      ..+|+|||||.++ |...+.    ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus       130 ~~~~~~~~~~~~~~lv~E~~~~~-l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~k  204 (464)
T 3ttj_A          130 FTPQKTLEEFQDVYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  204 (464)
T ss_dssp             ECSCCSTTTCCEEEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred             EccCCccccCCeEEEEEeCCCCC-HHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEE
Confidence            9654      4679999999754 555543    2399999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.....                                                         ......+||+
T Consensus       205 l~DFG~a~~~~~~---------------------------------------------------------~~~~~~~gt~  227 (464)
T 3ttj_A          205 ILDFGLARTAGTS---------------------------------------------------------FMMTPYVVTR  227 (464)
T ss_dssp             ECCCCCC-----C---------------------------------------------------------CCC----CCC
T ss_pred             EEEEEeeeecCCC---------------------------------------------------------cccCCCcccc
Confidence            9999999765321                                                         1234467999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C-------------------CCCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P-------------------PDLVGE  306 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~-------------------~~~~~~  306 (426)
                      .|+|||++.+..|+.++|||||||++|+|++|++||.+.+..+++.+++..   +                   +.....
T Consensus       228 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~  307 (464)
T 3ttj_A          228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL  307 (464)
T ss_dssp             TTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCC
T ss_pred             cccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCC
Confidence            999999999999999999999999999999999999999887777665421   0                   000000


Q ss_pred             ---------------------CHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          307 ---------------------PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       307 ---------------------~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                           ++.+++||.+||++||.+|||++|+|+||||+.
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          308 TFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             CHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence                                 345899999999999999999999999999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=6.6e-52  Score=408.87  Aligned_cols=256  Identities=27%  Similarity=0.438  Sum_probs=222.5

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|.+..+++.||+|++.....             .....+.+|+.+|+.++||||++++++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-------------~~~~~~~~E~~il~~l~hpnIv~~~~~  116 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-------------LDKYTVKNEISIMNQLHHPKLINLHDA  116 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-------------HHHHHHHHHHHHHTTCCSTTBCCEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-------------hhHHHHHHHHHHHHhCCCcCCCeEEEE
Confidence            4579999999999999999999999999999999854321             123467889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc--CCcEEEecc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE--NGHIMLVDF  172 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~--~g~ikL~DF  172 (426)
                      +.+...+|+|||||.||+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.  .+.+||+||
T Consensus       117 ~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DF  195 (387)
T 1kob_A          117 FEDKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDF  195 (387)
T ss_dssp             EECSSEEEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred             EEeCCEEEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEec
Confidence            999999999999999999999876432 35999999999999999999999999999999999999974  478999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+...                                                         ......+||+.|+|
T Consensus       196 G~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~a  218 (387)
T 1kob_A          196 GLATKLNPD---------------------------------------------------------EIVKVTTATAEFAA  218 (387)
T ss_dssp             TTCEECCTT---------------------------------------------------------SCEEEECSSGGGCC
T ss_pred             ccceecCCC---------------------------------------------------------cceeeeccCCCccC
Confidence            999865321                                                         11233469999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+....     ......+..+.+||.+||+.||.+|||
T Consensus       219 PE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  298 (387)
T 1kob_A          219 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT  298 (387)
T ss_dssp             HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             chhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC
Confidence            999999999999999999999999999999999998888777765432     222356889999999999999999999


Q ss_pred             hHHHhcCCCcCCCC
Q 014344          328 VEEIKGHEFFKGVN  341 (426)
Q Consensus       328 ~~eil~hp~f~~~~  341 (426)
                      +.++|+||||++..
T Consensus       299 ~~ell~hp~~~~~~  312 (387)
T 1kob_A          299 VHDALEHPWLKGDH  312 (387)
T ss_dssp             HHHHHTSTTTSSCC
T ss_pred             HHHHhhCccccCCc
Confidence            99999999998754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=8.8e-52  Score=404.78  Aligned_cols=254  Identities=32%  Similarity=0.473  Sum_probs=207.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ...++|++++.||+|+||+||+|++..+++.||||++.+..              .....+.+|+.+++.++||||++++
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~hpniv~~~   82 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--------------AIDENVQREIINHRSLRHPNIVRFK   82 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--------------TSCHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--------------cccHHHHHHHHHHHhCCCCCCCcEE
Confidence            45678999999999999999999999999999999985432              1124577899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc--EEEe
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH--IMLV  170 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~--ikL~  170 (426)
                      +++.+.+.+|+|||||.||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+
T Consensus        83 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~  160 (361)
T 3uc3_A           83 EVILTPTHLAIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKIC  160 (361)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEEC
T ss_pred             EEEeeCCEEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEe
Confidence            99999999999999999999999887643  4999999999999999999999999999999999999987765  9999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+++.....                                                         ......+||+.|
T Consensus       161 Dfg~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y  183 (361)
T 3uc3_A          161 DFGYSKSSVLH---------------------------------------------------------SQPKSTVGTPAY  183 (361)
T ss_dssp             CCCCC------------------------------------------------------------------------CTT
T ss_pred             ecCcccccccc---------------------------------------------------------CCCCCCcCCCCc
Confidence            99998743211                                                         122344699999


Q ss_pred             ccchhhcCCCCChh-hHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCC---CCCCCCCHHHHHHHHHHhccCC
Q 014344          251 VAPEIIEGKGHDFA-VDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRP---PDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       251 ~aPE~~~~~~~~~~-~DiwSlG~il~ell~g~~pf~~~~~----~~~~~~i~~~~---~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      +|||++.+..++.+ +|||||||++|+|++|+.||.+...    ......+....   +.....+..+.+||.+||+.||
T Consensus       184 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  263 (361)
T 3uc3_A          184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADP  263 (361)
T ss_dssp             SCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCT
T ss_pred             CChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCCh
Confidence            99999998887655 8999999999999999999987543    34444444333   2233468899999999999999


Q ss_pred             CCCCChHHHhcCCCcCC
Q 014344          323 TKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~  339 (426)
                      .+|||+.||++||||..
T Consensus       264 ~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          264 ATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             TTSCCHHHHHTSHHHHT
T ss_pred             hHCcCHHHHHhCcchhc
Confidence            99999999999999953

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.6e-52  Score=402.05  Aligned_cols=263  Identities=27%  Similarity=0.408  Sum_probs=224.0

Q ss_pred             CcEEE-eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeee
Q 014344           17 CLRIV-SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGV   94 (426)
Q Consensus        17 ~y~i~-~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~   94 (426)
                      .|.+. +.||+|+||+||+|++..+++.||+|++.+...           .......+.+|+.+++.+. ||||++++++
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-----------GQDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-----------TEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-----------chHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            47777 899999999999999999999999999865321           1123467888999999995 6999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---CCcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---NGHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~g~ikL~D  171 (426)
                      +.+...+|+|||||.||+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~D  177 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVD  177 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEee
Confidence            999999999999999999999876555567999999999999999999999999999999999999997   78999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                         .....+||+.|+
T Consensus       178 fg~a~~~~~~~---------------------------------------------------------~~~~~~gt~~y~  200 (327)
T 3lm5_A          178 FGMSRKIGHAC---------------------------------------------------------ELREIMGTPEYL  200 (327)
T ss_dssp             GGGCEEC------------------------------------------------------------------CCCGGGC
T ss_pred             CccccccCCcc---------------------------------------------------------ccccccCCcCcc
Confidence            99998653211                                                         122346999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+....     ......+..+.+||.+||+.||.+||
T Consensus       201 aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  280 (327)
T 3lm5_A          201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRP  280 (327)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             CCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCc
Confidence            9999999999999999999999999999999999998888777665322     22335678899999999999999999


Q ss_pred             ChHHHhcCCCcCCCChhhhhh
Q 014344          327 GVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~~~~  347 (426)
                      |++++|+||||++.+|+.+..
T Consensus       281 t~~~ll~h~~~~~~~~~~~~~  301 (327)
T 3lm5_A          281 TAEICLSHSWLQQWDFENLFH  301 (327)
T ss_dssp             CHHHHTTCGGGCCCCTTCC--
T ss_pred             CHHHHhCCHhhcccccccccC
Confidence            999999999999999987644

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.1e-52  Score=403.05  Aligned_cols=258  Identities=25%  Similarity=0.401  Sum_probs=215.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|++..+++.||||++......            ...+.+.+|+.+++.++||||++++++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~~~~~   73 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV------------DCPENIKKEICINKMLNHENVVKFYGH   73 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------CHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc------------chHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            46899999999999999999999999999999998543211            123467789999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.+++..|+|||||+|++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        74 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~  151 (323)
T 3tki_A           74 RREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL  151 (323)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EecCCeEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeec
Confidence            99999999999999999999987543  3499999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +..+....                                                      ........+||+.|+|||
T Consensus       152 a~~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~aPE  177 (323)
T 3tki_A          152 ATVFRYNN------------------------------------------------------RERLLNKMCGTLPYVAPE  177 (323)
T ss_dssp             CEECEETT------------------------------------------------------EECCBCSCCSCGGGSCHH
T ss_pred             cceeccCC------------------------------------------------------cccccCCCccCcCccCcH
Confidence            97653111                                                      011233457999999999


Q ss_pred             hhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhcCC---CCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          255 IIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKET-FYRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       255 ~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ++.+..+ +.++|||||||++|+|++|+.||...+.... +.......   ......+..+.+||.+||+.||++|||++
T Consensus       178 ~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  257 (323)
T 3tki_A          178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP  257 (323)
T ss_dssp             HHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHH
Confidence            9988775 7899999999999999999999987665322 22222221   22234678899999999999999999999


Q ss_pred             HHhcCCCcCCC
Q 014344          330 EIKGHEFFKGV  340 (426)
Q Consensus       330 eil~hp~f~~~  340 (426)
                      |+++||||+..
T Consensus       258 eil~h~~~~~~  268 (323)
T 3tki_A          258 DIKKDRWYNKP  268 (323)
T ss_dssp             HHTTCTTTTCC
T ss_pred             HHhhChhhccc
Confidence            99999999753

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.5e-51  Score=402.55  Aligned_cols=252  Identities=26%  Similarity=0.424  Sum_probs=215.0

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-----CCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-----HPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-----hp~   87 (426)
                      +-.++|+++++||+|+||+||+|++..+++.||||++....              .....+..|+.+++.+.     |||
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~~~~~~h~~   97 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--------------KYTRSAKIEADILKKIQNDDINNNN   97 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--------------HHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--------------hhhhhhHHHHHHHHHhcccCCCCCC
Confidence            33467999999999999999999999999999999985321              23345677999999986     999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc----
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE----  163 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~----  163 (426)
                      |+++++++...+.+|+||||| |++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.    
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~  176 (360)
T 3llt_A           98 IVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFE  176 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCC
T ss_pred             eecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccc
Confidence            999999999999999999999 899999988776667999999999999999999999999999999999999975    


Q ss_pred             ---------------------CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCC
Q 014344          164 ---------------------NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHS  222 (426)
Q Consensus       164 ---------------------~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (426)
                                           ++.+||+|||++.....                                          
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~------------------------------------------  214 (360)
T 3llt_A          177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD------------------------------------------  214 (360)
T ss_dssp             EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS------------------------------------------
T ss_pred             ccccchhcccccccccccccCCCCEEEEeccCceecCC------------------------------------------
Confidence                                 78999999999875421                                          


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC
Q 014344          223 PRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD  302 (426)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  302 (426)
                                       .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+......
T Consensus       215 -----------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~  277 (360)
T 3llt_A          215 -----------------YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQP  277 (360)
T ss_dssp             -----------------CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCC
T ss_pred             -----------------CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCC
Confidence                             112346999999999999999999999999999999999999999988877665544311100


Q ss_pred             CC-----------------------------------------------CCCHHHHHHHHHHhccCCCCCCChHHHhcCC
Q 014344          303 LV-----------------------------------------------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHE  335 (426)
Q Consensus       303 ~~-----------------------------------------------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp  335 (426)
                      .+                                               ..+..+.+||.+||+.||++|||++|+|+||
T Consensus       278 ~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp  357 (360)
T 3llt_A          278 IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHK  357 (360)
T ss_dssp             CCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred             CCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence            00                                               1125677999999999999999999999999


Q ss_pred             CcC
Q 014344          336 FFK  338 (426)
Q Consensus       336 ~f~  338 (426)
                      ||+
T Consensus       358 ~f~  360 (360)
T 3llt_A          358 FLE  360 (360)
T ss_dssp             GGC
T ss_pred             ccC
Confidence            995

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2.9e-51  Score=387.06  Aligned_cols=258  Identities=24%  Similarity=0.428  Sum_probs=223.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|.+..+++.||+|++......           ......+.+|+.+++.++||||++++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~   73 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-----------ARDFQKLEREARICRKLQHPNIVRLHDS   73 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-----------HHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-----------HHHHHHHHHHHHHHHHcCCCCcCeEEEE
Confidence            35699999999999999999999999999999999654321           2245678889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc---EEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH---IMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~---ikL~D  171 (426)
                      +..+...|+||||+.|++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.   +||+|
T Consensus        74 ~~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~D  151 (284)
T 3kk8_A           74 IQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD  151 (284)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECC
T ss_pred             EEcCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEee
Confidence            99999999999999999999887665  34999999999999999999999999999999999999987655   99999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++......                                                         .......||+.|+
T Consensus       152 fg~~~~~~~~---------------------------------------------------------~~~~~~~~~~~y~  174 (284)
T 3kk8_A          152 FGLAIEVNDS---------------------------------------------------------EAWHGFAGTPGYL  174 (284)
T ss_dssp             CTTCEECCSS---------------------------------------------------------CBCCCSCSCGGGC
T ss_pred             ceeeEEcccC---------------------------------------------------------ccccCCCCCcCCc
Confidence            9998765321                                                         1122346999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----DLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..++.++|||||||++|+|++|+.||.+.+.......+.....     .....++.+.+||.+||+.||++||
T Consensus       175 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  254 (284)
T 3kk8_A          175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI  254 (284)
T ss_dssp             CHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             CchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCC
Confidence            99999999999999999999999999999999999988877777654322     2235688999999999999999999


Q ss_pred             ChHHHhcCCCcCCCCh
Q 014344          327 GVEEIKGHEFFKGVNW  342 (426)
Q Consensus       327 s~~eil~hp~f~~~~~  342 (426)
                      |++|+++||||+...+
T Consensus       255 s~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          255 TADQALKVPWICNRER  270 (284)
T ss_dssp             CHHHHTTSHHHHSCCC
T ss_pred             CHHHHhcCccccCChh
Confidence            9999999999986543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3.4e-52  Score=404.63  Aligned_cols=254  Identities=28%  Similarity=0.438  Sum_probs=215.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~   93 (426)
                      .++|++++.||+|+||+||+|+++.+++.||||++.+..                 .....|+.+|.++ +||||+++++
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----------------~~~~~E~~~l~~~~~hp~iv~~~~   83 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-----------------RDPTEEIEILLRYGQHPNIITLKD   83 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT-----------------CCCHHHHHHHHHHTTSTTBCCEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc-----------------CChHHHHHHHHHhcCCCCcCeEEE
Confidence            346999999999999999999999999999999995432                 1223588888887 7999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC----CcEEE
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN----GHIML  169 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~----g~ikL  169 (426)
                      ++.+...+|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||+...    +.+||
T Consensus        84 ~~~~~~~~~lv~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl  161 (342)
T 2qr7_A           84 VYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRI  161 (342)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred             EEEcCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEE
Confidence            999999999999999999999987654  459999999999999999999999999999999999998543    35999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                        ....+.+||+.
T Consensus       162 ~Dfg~a~~~~~~~--------------------------------------------------------~~~~~~~gt~~  185 (342)
T 2qr7_A          162 CDFGFAKQLRAEN--------------------------------------------------------GLLMTPCYTAN  185 (342)
T ss_dssp             CCCTTCEECBCTT--------------------------------------------------------CCBCCSSCCSS
T ss_pred             EECCCcccCcCCC--------------------------------------------------------CceeccCCCcc
Confidence            9999998653211                                                        12334579999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhccC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRG---SSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~---~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~d  321 (426)
                      |+|||++.+..|+.++|||||||++|+|++|..||.+   .+..+.+..+......     +...+..+.+||++||..|
T Consensus       186 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  265 (342)
T 2qr7_A          186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVD  265 (342)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSS
T ss_pred             ccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCC
Confidence            9999999988899999999999999999999999986   3455666666543322     2356889999999999999


Q ss_pred             CCCCCChHHHhcCCCcCCCChhhh
Q 014344          322 PTKRIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       322 P~~R~s~~eil~hp~f~~~~~~~~  345 (426)
                      |.+|||+.++++||||.  +|+.+
T Consensus       266 P~~R~t~~~il~hp~~~--~~~~~  287 (342)
T 2qr7_A          266 PHQRLTAALVLRHPWIV--HWDQL  287 (342)
T ss_dssp             TTTSCCHHHHTTSHHHH--TGGGS
T ss_pred             hhHCcCHHHHhcCCeec--Ccccc
Confidence            99999999999999995  46654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.9e-51  Score=388.62  Aligned_cols=265  Identities=28%  Similarity=0.489  Sum_probs=227.9

Q ss_pred             CCCCCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344            5 VNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus         5 ~~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      +.+.+.+.+.+++|++++.||+|+||.||+|++..+++.||||++.+......          .....+.+|+.+++.++
T Consensus         3 l~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~   72 (284)
T 2vgo_A            3 LAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE----------GVEHQLRREIEIQSHLR   72 (284)
T ss_dssp             -------CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHTCC
T ss_pred             hhhCCccchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchH----------HHHHHHHHHHHHHhcCC
Confidence            34567788999999999999999999999999999999999999976544322          12356888999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      ||||+++++++.+.+.+|+||||+++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        73 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~  150 (284)
T 2vgo_A           73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK  150 (284)
T ss_dssp             CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT
T ss_pred             CCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCC
Confidence            9999999999999999999999999999999887653  49999999999999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||++......                                                          .....
T Consensus       151 ~~~kl~Dfg~~~~~~~~----------------------------------------------------------~~~~~  172 (284)
T 2vgo_A          151 GELKIADFGWSVHAPSL----------------------------------------------------------RRRTM  172 (284)
T ss_dssp             CCEEECCCTTCEECSSS----------------------------------------------------------CBCCC
T ss_pred             CCEEEecccccccCccc----------------------------------------------------------ccccc
Confidence            99999999998654211                                                          12234


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCC
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~  323 (426)
                      +||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+....... ...+..+.+||.+||..||.
T Consensus       173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  252 (284)
T 2vgo_A          173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPP  252 (284)
T ss_dssp             CSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGG
T ss_pred             cCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHHHhhcCHh
Confidence            68999999999999999999999999999999999999999988888777776543332 34688999999999999999


Q ss_pred             CCCChHHHhcCCCcCC
Q 014344          324 KRIGVEEIKGHEFFKG  339 (426)
Q Consensus       324 ~R~s~~eil~hp~f~~  339 (426)
                      +|||++++++||||+.
T Consensus       253 ~Rps~~~ll~h~~~~~  268 (284)
T 2vgo_A          253 QRLPLKGVMEHPWVKA  268 (284)
T ss_dssp             GSCCHHHHHTCHHHHH
T ss_pred             hCCCHHHHhhCHHHHh
Confidence            9999999999999963

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=2.6e-51  Score=410.88  Aligned_cols=285  Identities=24%  Similarity=0.390  Sum_probs=213.3

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++.+..           ......+++.+|+.+|+.++||||++++++
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~   93 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-----------EDLIDCKRILREITILNRLKSDYIIRLYDL   93 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-----------TSHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-----------cChHHHHHHHHHHHHHHHcCCCCcceEEEE
Confidence            357999999999999999999999999999999995421           122345688899999999999999999999


Q ss_pred             eecC-----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           95 LSTD-----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        95 ~~~~-----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +...     ..+|+|||||. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL  170 (432)
T 3n9x_A           94 IIPDDLLKFDELYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKV  170 (432)
T ss_dssp             CCCSCTTTCCCEEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred             EecCCCCcCCeEEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEE
Confidence            9766     67999999996 6999987653  45999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++................                                  ..................+||+.
T Consensus       171 ~DFGla~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~gt~~  216 (432)
T 3n9x_A          171 CDFGLARTINSEKDTNIVNDLEE----------------------------------NEEPGPHNKNLKKQLTSHVVTRW  216 (432)
T ss_dssp             CCCTTCEEC-----------------------------------------------------------------CCCCCT
T ss_pred             ccCCCcccccccccccccccccc----------------------------------cccccccccchhccccCCCCCcc
Confidence            99999987643221100000000                                  00000000011124567789999


Q ss_pred             Cccchhh-cCCCCChhhHHHHHHHHHHHHHh-----------CCCCCCCCCH-----------------HHHHHHH---h
Q 014344          250 YVAPEII-EGKGHDFAVDWWSLGVVLHEMLY-----------GATPFRGSSR-----------------KETFYRI---L  297 (426)
Q Consensus       250 y~aPE~~-~~~~~~~~~DiwSlG~il~ell~-----------g~~pf~~~~~-----------------~~~~~~i---~  297 (426)
                      |+|||++ .+..|+.++|||||||++|||++           |.++|.+.+.                 ..++..+   +
T Consensus       217 Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~  296 (432)
T 3n9x_A          217 YRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNII  296 (432)
T ss_dssp             TCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHH
T ss_pred             ccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhc
Confidence            9999986 56679999999999999999998           5555555431                 1122111   1


Q ss_pred             cCCC-----------------------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhhhhh
Q 014344          298 CRPP-----------------------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       298 ~~~~-----------------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~~~~  347 (426)
                      ..++                             .....++.+.+||.+||+.||.+|||++|+|+||||++++|.....
T Consensus       297 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e~  375 (432)
T 3n9x_A          297 GTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLEN  375 (432)
T ss_dssp             CSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC-
T ss_pred             CCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccCc
Confidence            1110                             0134688899999999999999999999999999999998876543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-51  Score=404.20  Aligned_cols=255  Identities=28%  Similarity=0.467  Sum_probs=211.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|.+..+|+.||||++.+..           ......+++.+|+.+|+.++||||++++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~   92 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-----------QSELFAKRAYRELRLLKHMRHENVIGLLDV   92 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-----------SSHHHHHHHHHHHHHHHHCCBTTBCCCSEE
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-----------cCHHHHHHHHHHHHHHHhCCCcCCCCceee
Confidence            367999999999999999999999999999999985432           122345678899999999999999999999


Q ss_pred             eecCC------eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTDK------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~~------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +....      .+|+||||+ |++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k  168 (367)
T 1cm8_A           93 FTPDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK  168 (367)
T ss_dssp             ECSCSSTTTCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             EecCCccccCceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEE
Confidence            97663      469999999 8999998875   3499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++....                                                           .....+||+
T Consensus       169 l~Dfg~a~~~~~-----------------------------------------------------------~~~~~~~t~  189 (367)
T 1cm8_A          169 ILDFGLARQADS-----------------------------------------------------------EMTGYVVTR  189 (367)
T ss_dssp             ECCCTTCEECCS-----------------------------------------------------------SCCSSCSCG
T ss_pred             EEeeeccccccc-----------------------------------------------------------ccCcCcCCC
Confidence            999999876421                                                           123356899


Q ss_pred             CCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC------------------------
Q 014344          249 EYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP------------------------  300 (426)
Q Consensus       249 ~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~------------------------  300 (426)
                      .|+|||++.+ ..++.++|||||||++|+|++|++||.+.+...++..+..   .+                        
T Consensus       190 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (367)
T 1cm8_A          190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE  269 (367)
T ss_dssp             GGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCC
T ss_pred             CcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCC
Confidence            9999999987 7799999999999999999999999999988776665531   11                        


Q ss_pred             -----CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          301 -----PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       301 -----~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                           ..+...++.+.+||.+||+.||.+|||++|+|+||||+...+.
T Consensus       270 ~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~  317 (367)
T 1cm8_A          270 KKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT  317 (367)
T ss_dssp             CCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred             CCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCC
Confidence                 0123457889999999999999999999999999999876543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.2e-51  Score=397.82  Aligned_cols=258  Identities=25%  Similarity=0.392  Sum_probs=210.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|++..+++.||||++.......            ....+.+|+.+|+.++||||++++++
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~E~~~l~~l~h~~iv~~~~~   68 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG------------APCTAIREVSLLKDLKHANIVTLHDI   68 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------------------CCCCCCCHHHHSCCCCTTBCCEEEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc------------cchhHHHHHHHHHhcCCCCCCeeeeE
Confidence            468999999999999999999999999999999985432111            11123458999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.+++.+|+|||||. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        69 ~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  146 (324)
T 3mtl_A           69 IHTEKSLTLVFEYLD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGL  146 (324)
T ss_dssp             EECSSCEEEEEECCS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSE
T ss_pred             EeeCCEEEEEecccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcc
Confidence            999999999999997 68888876653 4599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                        ......+||+.|+|||
T Consensus       147 a~~~~~~~--------------------------------------------------------~~~~~~~~t~~y~aPE  170 (324)
T 3mtl_A          147 ARAKSIPT--------------------------------------------------------KTYDNEVVTLWYRPPD  170 (324)
T ss_dssp             EECC--------------------------------------------------------------------CGGGCCHH
T ss_pred             cccccCCc--------------------------------------------------------cccccccCcccccChh
Confidence            87543111                                                        1123346899999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC----------------------------
Q 014344          255 IIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD----------------------------  302 (426)
Q Consensus       255 ~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~----------------------------  302 (426)
                      ++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+..   .+..                            
T Consensus       171 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (324)
T 3mtl_A          171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSH  250 (324)
T ss_dssp             HHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHH
T ss_pred             hhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhh
Confidence            9987 6689999999999999999999999999988776655532   1110                            


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                      ....+..+.+||.+||+.||.+|||++|+|+||||+++..
T Consensus       251 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          251 APRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             cCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence            1134677899999999999999999999999999987543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4.3e-51  Score=417.29  Aligned_cols=266  Identities=27%  Similarity=0.389  Sum_probs=220.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|+++.+++.||||++.+...................+.+.+|+.+|+.++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            46799999999999999999999999999999999765543211000011112345678899999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC---cEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG---HIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g---~ikL~D  171 (426)
                      +.+...+|+|||||+||+|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence            999999999999999999999877653  499999999999999999999999999999999999999876   699999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+...                                                         ......+||+.|+
T Consensus       193 fg~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~  215 (504)
T 3q5i_A          193 FGLSSFFSKD---------------------------------------------------------YKLRDRLGTAYYI  215 (504)
T ss_dssp             CTTCEECCTT---------------------------------------------------------SCBCCCCSCTTTC
T ss_pred             CCCCEEcCCC---------------------------------------------------------CccccccCCcCCC
Confidence            9999765321                                                         1223456999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+.......     ...+..+++||++||++||.+||
T Consensus       216 aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~  294 (504)
T 3q5i_A          216 APEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRC  294 (504)
T ss_dssp             CHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             CHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCC
Confidence            9999875 58999999999999999999999999999988888877554332     35688999999999999999999


Q ss_pred             ChHHHhcCCCcCCC
Q 014344          327 GVEEIKGHEFFKGV  340 (426)
Q Consensus       327 s~~eil~hp~f~~~  340 (426)
                      |++|+|+||||+..
T Consensus       295 t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          295 TAEEALNSRWIKKY  308 (504)
T ss_dssp             CHHHHHTSHHHHHT
T ss_pred             CHHHHhcCHhhhhc
Confidence            99999999999753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1e-51  Score=401.21  Aligned_cols=267  Identities=27%  Similarity=0.430  Sum_probs=221.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|.+..+++.||+|++.+......        .....+.+.+|+.+|+.++||||+++++++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   97 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI--------NPKDVERIKTEVRLMKKLHHPNIARLYEVY   97 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC-----------CHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhccc--------CHHHHHHHHHHHHHHHhCCCCCcceeehhh
Confidence            469999999999999999999999999999999977654321        123457889999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhc--------------------------------------cCCCCHHHHHHHHHHH
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQS--------------------------------------EQMFSDDTIRFYAAEL  137 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------------------------------~~~l~~~~~~~~~~qi  137 (426)
                      .+.+..|+|||||+||+|.+++....                                      ...+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            99999999999999999998864110                                      1124678899999999


Q ss_pred             HHHHHHHHHCCCcccCCCCCCeeeccCC--cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCC
Q 014344          138 VLALEYLHNMGIVYRDLKPENIMIQENG--HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGIS  215 (426)
Q Consensus       138 l~aL~~LH~~giiHrDlKp~NiLl~~~g--~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (426)
                      +.||+|||++||+||||||+|||++.++  .+||+|||++..+.....                                
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~--------------------------------  225 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN--------------------------------  225 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTC--------------------------------
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCc--------------------------------
Confidence            9999999999999999999999998776  899999999976532110                                


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 014344          216 LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF  293 (426)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~  293 (426)
                                          .........+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+..+..
T Consensus       226 --------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  285 (345)
T 3hko_A          226 --------------------GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI  285 (345)
T ss_dssp             --------------------C--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             --------------------cccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHH
Confidence                                00112234569999999999976  67899999999999999999999999999988888


Q ss_pred             HHHhcCCCCCC-----CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          294 YRILCRPPDLV-----GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       294 ~~i~~~~~~~~-----~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                      ..++.......     ..+..+.+||.+||+.||.+|||+.++|+||||++..|
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          286 SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            87765543322     35788999999999999999999999999999987654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=3.4e-51  Score=416.20  Aligned_cols=254  Identities=28%  Similarity=0.444  Sum_probs=220.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.+.....           .....+.+|+.+|+.++||||+++++++
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hpniv~~~~~~   90 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-----------KDTSTILREVELLKKLDHPNIMKLFEIL   90 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-----------SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-----------hHHHHHHHHHHHHHhCCCCCcCeEEEEE
Confidence            46999999999999999999999999999999996643211           1346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec---cCCcEEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ---ENGHIMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~---~~g~ikL~DF  172 (426)
                      .+...+|+|||||.|++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+||
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df  168 (486)
T 3mwu_A           91 EDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF  168 (486)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSC
T ss_pred             EcCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEEC
Confidence            99999999999999999999876653  499999999999999999999999999999999999995   4568999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+...                                                         ......+||+.|+|
T Consensus       169 g~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~a  191 (486)
T 3mwu_A          169 GLSTCFQQN---------------------------------------------------------TKMKDRIGTAYYIA  191 (486)
T ss_dssp             SCTTTBCCC-------------------------------------------------------------CCTTGGGGCC
T ss_pred             CcCeECCCC---------------------------------------------------------CccCCCcCCCCCCC
Confidence            999765321                                                         11234469999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......     +...+..+++||.+||+.||.+|||
T Consensus       192 PE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  270 (486)
T 3mwu_A          192 PEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT  270 (486)
T ss_dssp             GGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcC
Confidence            999987 4999999999999999999999999999988888877654322     2345788999999999999999999


Q ss_pred             hHHHhcCCCcCCC
Q 014344          328 VEEIKGHEFFKGV  340 (426)
Q Consensus       328 ~~eil~hp~f~~~  340 (426)
                      +.++|+||||+..
T Consensus       271 ~~~~l~hp~~~~~  283 (486)
T 3mwu_A          271 ATQCLEHPWIQKY  283 (486)
T ss_dssp             HHHHHHCHHHHHT
T ss_pred             HHHHhcCHhhccC
Confidence            9999999999754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=7.8e-51  Score=391.73  Aligned_cols=252  Identities=25%  Similarity=0.438  Sum_probs=219.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|...+.||+|+||.||+|++..+|+.||||++....             ....+.+.+|+.+|+.++||||+++++++.
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  112 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-------------QQRRELLFNEVVIMRDYQHFNVVEMYKSYL  112 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-------------CCSHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-------------hhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence            4888999999999999999999999999999985421             123456788999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      ..+..|+||||++|++|.+++..   ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       113 ~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~  189 (321)
T 2c30_A          113 VGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCA  189 (321)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeee
Confidence            99999999999999999998753   349999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ......                                                        ......+||+.|+|||++
T Consensus       190 ~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE~~  213 (321)
T 2c30_A          190 QISKDV--------------------------------------------------------PKRKSLVGTPYWMAPEVI  213 (321)
T ss_dssp             ECCSSS--------------------------------------------------------CCBCCCCSCGGGCCHHHH
T ss_pred             ecccCc--------------------------------------------------------cccccccCCccccCHhhh
Confidence            653211                                                        112345799999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC----CCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL----VGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      .+..++.++|||||||++|+|++|+.||.+.+..+....+....+..    ...+..+.+||.+||+.||++|||+++++
T Consensus       214 ~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  293 (321)
T 2c30_A          214 SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELL  293 (321)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            99999999999999999999999999999988887777665443322    23578899999999999999999999999


Q ss_pred             cCCCcCCC
Q 014344          333 GHEFFKGV  340 (426)
Q Consensus       333 ~hp~f~~~  340 (426)
                      +||||...
T Consensus       294 ~hp~~~~~  301 (321)
T 2c30_A          294 DHPFLLQT  301 (321)
T ss_dssp             TSGGGGGC
T ss_pred             cChhhccC
Confidence            99999753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1e-50  Score=384.15  Aligned_cols=254  Identities=28%  Similarity=0.463  Sum_probs=215.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||+||+|++..+++.+|+|++.+...            ....+.+..|+.+|+.++||||+++++++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   89 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS------------QVPMEQIEAEIEVLKSLDHPNIIKIFEVF   89 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC------------CSCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc------------chhHHHHHHHHHHHHhCCCchHHhHHHhe
Confidence            579999999999999999999999999999999865421            12346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee---ccCCcEEEe
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI---QENGHIMLV  170 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl---~~~g~ikL~  170 (426)
                      .+....|+|||||+|++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~  169 (285)
T 3is5_A           90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKII  169 (285)
T ss_dssp             ECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEEC
T ss_pred             ecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEE
Confidence            9999999999999999999887543  23569999999999999999999999999999999999999   456889999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++..+...                                                         ......+||+.|
T Consensus       170 Dfg~a~~~~~~---------------------------------------------------------~~~~~~~~t~~y  192 (285)
T 3is5_A          170 DFGLAELFKSD---------------------------------------------------------EHSTNAAGTALY  192 (285)
T ss_dssp             CCCCCCC-------------------------------------------------------------------CTTGGG
T ss_pred             eeecceecCCc---------------------------------------------------------ccCcCcccccCc
Confidence            99998765321                                                         112334699999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC----CCCCHHHHHHHHHHhccCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL----VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      +|||++. ..++.++|||||||++|+|++|+.||.+.+..+....+....+..    ...++.+.+||.+||+.||++||
T Consensus       193 ~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  271 (285)
T 3is5_A          193 MAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRP  271 (285)
T ss_dssp             CCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSC
T ss_pred             CChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCc
Confidence            9999986 468999999999999999999999999988877766665433222    23578899999999999999999


Q ss_pred             ChHHHhcCCCcCC
Q 014344          327 GVEEIKGHEFFKG  339 (426)
Q Consensus       327 s~~eil~hp~f~~  339 (426)
                      |+.|+|+||||+.
T Consensus       272 s~~e~l~hp~f~~  284 (285)
T 3is5_A          272 SAAQVLHHEWFKQ  284 (285)
T ss_dssp             CHHHHHTSGGGGC
T ss_pred             CHHHHhcCHHhhc
Confidence            9999999999974

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=4.2e-51  Score=394.27  Aligned_cols=250  Identities=27%  Similarity=0.454  Sum_probs=195.9

Q ss_pred             CCcEEE---eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           16 SCLRIV---SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        16 ~~y~i~---~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      .+|++.   +.||+|+||+||+|++..+++.||||++.+.                ....+.+|+.+++.+. ||||+++
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----------------~~~~~~~e~~~l~~l~~h~niv~~   71 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----------------MEANTQKEITALKLCEGHPNIVKL   71 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----------------GHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh----------------hhhhHHHHHHHHHHhcCCCCeeEE
Confidence            457775   7899999999999999999999999998543                2245667999999997 9999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC---cEE
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG---HIM  168 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g---~ik  168 (426)
                      ++++.++...|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++   .+|
T Consensus        72 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~k  149 (325)
T 3kn6_A           72 HEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIK  149 (325)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEE
T ss_pred             EEEEEcCCEEEEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEE
Confidence            99999999999999999999999998764  4599999999999999999999999999999999999998766   899


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++.......                                                        ......+||+
T Consensus       150 l~Dfg~a~~~~~~~--------------------------------------------------------~~~~~~~~t~  173 (325)
T 3kn6_A          150 IIDFGFARLKPPDN--------------------------------------------------------QPLKTPCFTL  173 (325)
T ss_dssp             ECCCTTCEECCC--------------------------------------------------------------------
T ss_pred             EeccccceecCCCC--------------------------------------------------------CcccccCCCc
Confidence            99999997653211                                                        1223456899


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhcCCCCCC-----CCCHHHHHHHHH
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-------KETFYRILCRPPDLV-----GEPTPLRNLIRR  316 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~~~-----~~~~~~~~li~~  316 (426)
                      .|+|||++.+..++.++|||||||++|+|++|+.||.+.+.       .+....+........     ..+..+++||.+
T Consensus       174 ~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  253 (325)
T 3kn6_A          174 HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQG  253 (325)
T ss_dssp             ----------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHH
T ss_pred             CccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999987543       345555554433322     457889999999


Q ss_pred             HhccCCCCCCChHHHhcCCCcCC
Q 014344          317 LLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ||+.||.+|||++++++||||++
T Consensus       254 ~L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          254 LLTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             HHCCCTTTCCCTTTSTTCGGGCT
T ss_pred             HCCCChhHCCCHHHHhcChhhcc
Confidence            99999999999999999999975

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=3e-51  Score=399.21  Aligned_cols=252  Identities=28%  Similarity=0.458  Sum_probs=204.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++.+.||+|+||+||+|++..+++.||||++.+..               ..+.+.+|+.+|+.++||||++++++
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~~~~~  116 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---------------DKKIVRTEIGVLLRLSHPNIIKLKEI  116 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------------CHHHHHCCCTTBCCEEEE
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---------------hHHHHHHHHHHHHhCCCCCCcceeee
Confidence            356999999999999999999999999999999985432               12356679999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---CCcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---NGHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~g~ikL~D  171 (426)
                      +.+...+|+||||++|++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|
T Consensus       117 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~D  194 (349)
T 2w4o_A          117 FETPTEISLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIAD  194 (349)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred             EecCCeEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEcc
Confidence            99999999999999999999987653  45999999999999999999999999999999999999975   88999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++......                                                         ......+||+.|+
T Consensus       195 fg~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~  217 (349)
T 2w4o_A          195 FGLSKIVEHQ---------------------------------------------------------VLMKTVCGTPGYC  217 (349)
T ss_dssp             CC-------------------------------------------------------------------------CGGGS
T ss_pred             CccccccCcc---------------------------------------------------------cccccccCCCCcc
Confidence            9998764311                                                         1123456999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhcCCC-----CCCCCCHHHHHHHHHHhccCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-TFYRILCRPP-----DLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~-----~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      |||++.+..++.++|||||||++|+|++|..||....... .+..+.....     .....+..+.+||.+||+.||++|
T Consensus       218 aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  297 (349)
T 2w4o_A          218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKR  297 (349)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhC
Confidence            9999999999999999999999999999999998766544 4555554322     223568899999999999999999


Q ss_pred             CChHHHhcCCCcCCC
Q 014344          326 IGVEEIKGHEFFKGV  340 (426)
Q Consensus       326 ~s~~eil~hp~f~~~  340 (426)
                      ||+.++|+||||++.
T Consensus       298 pt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          298 LTTFQALQHPWVTGK  312 (349)
T ss_dssp             CCHHHHHHSTTTTST
T ss_pred             cCHHHHhcCcccCCC
Confidence            999999999999764

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.2e-51  Score=403.62  Aligned_cols=255  Identities=25%  Similarity=0.396  Sum_probs=216.3

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCC
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      ..+.||+|+||.||+|++..+++.||+|++.....             .....+.+|+.+|+.++||||+++++++.+.+
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  159 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-------------KDKEEVKNEISVMNQLDHANLIQLYDAFESKN  159 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSH-------------HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-------------ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            36789999999999999999999999999854321             23457888999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee--ccCCcEEEeccccccc
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTK  177 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl--~~~g~ikL~DFgls~~  177 (426)
                      .+|+|||||+|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+  +.++.+||+|||++..
T Consensus       160 ~~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~  238 (373)
T 2x4f_A          160 DIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR  238 (373)
T ss_dssp             EEEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence            9999999999999998876543 349999999999999999999999999999999999999  5667999999999986


Q ss_pred             CCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhc
Q 014344          178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE  257 (426)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  257 (426)
                      +....                                                         .....+||+.|+|||++.
T Consensus       239 ~~~~~---------------------------------------------------------~~~~~~gt~~y~aPE~~~  261 (373)
T 2x4f_A          239 YKPRE---------------------------------------------------------KLKVNFGTPEFLAPEVVN  261 (373)
T ss_dssp             CCTTC---------------------------------------------------------BCCCCCSSCTTCCHHHHT
T ss_pred             cCCcc---------------------------------------------------------ccccccCCCcEeChhhcc
Confidence            53211                                                         122346999999999999


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       258 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      +..++.++|||||||++|+|++|+.||.+.+..+.+..++.....     ....+..+.+||.+||+.||.+|||+.|+|
T Consensus       262 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l  341 (373)
T 2x4f_A          262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEAL  341 (373)
T ss_dssp             TCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence            999999999999999999999999999999988888887654322     235688999999999999999999999999


Q ss_pred             cCCCcCCCChhhh
Q 014344          333 GHEFFKGVNWELL  345 (426)
Q Consensus       333 ~hp~f~~~~~~~~  345 (426)
                      +||||++..|...
T Consensus       342 ~hp~~~~~~~~~~  354 (373)
T 2x4f_A          342 KHPWLSDHKLHSR  354 (373)
T ss_dssp             HSHHHHCHHHHHH
T ss_pred             cCcCcCCCchhhh
Confidence            9999998765543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.4e-51  Score=385.48  Aligned_cols=259  Identities=24%  Similarity=0.473  Sum_probs=199.8

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|++++.||+|+||.||+|++..+++.||||++.+......          .....+.+|+.+++.++||||+++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~   78 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKA----------GMVQRVQNEVKIHCQLKHPSILELYN   78 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHTTBCCTTBCCEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhh----------hHHHHHHHHHHHHHhCCCCCeEeEEE
Confidence            45789999999999999999999999999999999976543221          23467888999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.+.+..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        79 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg  157 (278)
T 3cok_A           79 YFEDSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFG  157 (278)
T ss_dssp             EEECSSEEEEEEECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCT
T ss_pred             EEccCCeEEEEEecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeec
Confidence            999999999999999999999988754 3459999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++.......                                                        ......+||+.|+||
T Consensus       158 ~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aP  181 (278)
T 3cok_A          158 LATQLKMPH--------------------------------------------------------EKHYTLCGTPNYISP  181 (278)
T ss_dssp             TCEECC--------------------------------------------------------------------------
T ss_pred             ceeeccCCC--------------------------------------------------------CcceeccCCCCcCCc
Confidence            987653211                                                        112234689999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCCCCHHHHHHHHHHhccCCCCCCChHHHh
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK  332 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~s~~eil  332 (426)
                      |++.+..++.++|||||||++|+|++|+.||...+.......+..... .....+..+.+||.+||..||++|||+++++
T Consensus       182 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l  261 (278)
T 3cok_A          182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL  261 (278)
T ss_dssp             ----------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             chhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHh
Confidence            999999999999999999999999999999988776555555443322 2234578899999999999999999999999


Q ss_pred             cCCCcCC
Q 014344          333 GHEFFKG  339 (426)
Q Consensus       333 ~hp~f~~  339 (426)
                      +||||..
T Consensus       262 ~h~~~~~  268 (278)
T 3cok_A          262 DHPFMSR  268 (278)
T ss_dssp             TSTTTC-
T ss_pred             cCccccC
Confidence            9999975

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=7.1e-51  Score=390.46  Aligned_cols=265  Identities=26%  Similarity=0.397  Sum_probs=208.9

Q ss_pred             CCcEEE-eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeee
Q 014344           16 SCLRIV-SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRG   93 (426)
Q Consensus        16 ~~y~i~-~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~   93 (426)
                      +.|++. +.||+|+||+||+|++..+++.||||++.+..             ......+.+|+.+|.++ +||||+++++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~~~~h~~i~~~~~   78 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-------------GHIRSRVFREVEMLYQCQGHRNVLELIE   78 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-------------SCCHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-------------chhHHHHHHHHHHHHHhcCCCCeeeEEE
Confidence            569996 78999999999999999999999999985421             12346788899999985 7999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc---EEEe
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH---IMLV  170 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~---ikL~  170 (426)
                      ++.+++.+|+|||||+|++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.   +||+
T Consensus        79 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~  156 (316)
T 2ac3_A           79 FFEEEDRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKIC  156 (316)
T ss_dssp             EEEETTEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEEC
T ss_pred             EEeeCCEEEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEE
Confidence            9999999999999999999999987653  4999999999999999999999999999999999999998776   9999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++...........                                                 .........+||+.|
T Consensus       157 Dfg~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~gt~~y  187 (316)
T 2ac3_A          157 DFDLGSGIKLNGDCSP-------------------------------------------------ISTPELLTPCGSAEY  187 (316)
T ss_dssp             CTTCCC--------------------------------------------------------------------CCSGGG
T ss_pred             EccCccccccCCcccc-------------------------------------------------ccccccccccCCcCc
Confidence            9999876532110000                                                 001122345699999


Q ss_pred             ccchhhcC-----CCCChhhHHHHHHHHHHHHHhCCCCCCCCCH---------------HHHHHHHhcCCCCC-----CC
Q 014344          251 VAPEIIEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR---------------KETFYRILCRPPDL-----VG  305 (426)
Q Consensus       251 ~aPE~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---------------~~~~~~i~~~~~~~-----~~  305 (426)
                      +|||++.+     ..++.++|||||||++|+|++|+.||.+...               ...+..+.......     ..
T Consensus       188 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  267 (316)
T 2ac3_A          188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAH  267 (316)
T ss_dssp             CCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTT
T ss_pred             cChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhccc
Confidence            99999975     4578899999999999999999999987642               23344444333222     24


Q ss_pred             CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       306 ~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                      .+..+.+||.+||+.||.+|||+.|+++||||++..++.
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~  306 (316)
T 2ac3_A          268 ISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN  306 (316)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC------
T ss_pred             CCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCcc
Confidence            578899999999999999999999999999999876543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.6e-50  Score=380.70  Aligned_cols=251  Identities=26%  Similarity=0.460  Sum_probs=220.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||+||+|.+..++..+|+|++.+...             ...+.+.+|+.+++.++||||+++++++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~   75 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-------------EDVDRFKQEIEIMKSLDHPNIIRLYETF   75 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-------------SCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-------------chHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            469999999999999999999999999999999854321             1245788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee---ccCCcEEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI---QENGHIMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl---~~~g~ikL~DF  172 (426)
                      .+....|+|||||+|++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+||
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Df  153 (277)
T 3f3z_A           76 EDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDF  153 (277)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             ecCCeEEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEec
Confidence            99999999999999999999877643  49999999999999999999999999999999999999   78899999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+...                                                         ......+||+.|+|
T Consensus       154 g~~~~~~~~---------------------------------------------------------~~~~~~~~t~~y~a  176 (277)
T 3f3z_A          154 GLAARFKPG---------------------------------------------------------KMMRTKVGTPYYVS  176 (277)
T ss_dssp             TTCEECCTT---------------------------------------------------------SCBCCCCSCTTTCC
T ss_pred             ccceeccCc---------------------------------------------------------cchhccCCCCCccC
Confidence            998765321                                                         11233469999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-----CCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-----GEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+. ++.++|||||||++|+|++|+.||...+..+....+........     ..+..+.+||.+||+.||.+|||
T Consensus       177 PE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s  255 (277)
T 3f3z_A          177 PQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRIT  255 (277)
T ss_dssp             HHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             hHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcC
Confidence            9998765 89999999999999999999999999998888777765543333     56889999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      +.++|+||||+.
T Consensus       256 ~~~~l~h~~~~~  267 (277)
T 3f3z_A          256 SLQALEHEWFEK  267 (277)
T ss_dssp             HHHHTTSHHHHH
T ss_pred             HHHHhcCHHHhc
Confidence            999999999963

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-51  Score=396.85  Aligned_cols=263  Identities=25%  Similarity=0.385  Sum_probs=213.2

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ..++|++++.||+|+||+||+|++..+|+.||||++........        .....+.+.+|+.+++.++||||+++++
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~   79 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA--------KDGINRTALREIKLLQELSHPNIIGLLD   79 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC--------------------CTHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchh--------hhhhhHHHHHHHHHHhhCCCCCCCeEEE
Confidence            45789999999999999999999999999999999865432111        1122356788999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.....+|+|||||.+ +|..++... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||
T Consensus        80 ~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  157 (346)
T 1ua2_A           80 AFGHKSNISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFG  157 (346)
T ss_dssp             EECCTTCCEEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCG
T ss_pred             EEeeCCceEEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecc
Confidence            99999999999999985 888776543 3458999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++..+....                                                        ......+||+.|+||
T Consensus       158 ~a~~~~~~~--------------------------------------------------------~~~~~~~~t~~y~aP  181 (346)
T 1ua2_A          158 LAKSFGSPN--------------------------------------------------------RAYTHQVVTRWYRAP  181 (346)
T ss_dssp             GGSTTTSCC--------------------------------------------------------CCCCCSCCCCTTCCH
T ss_pred             cceeccCCc--------------------------------------------------------ccCCcccccccccCc
Confidence            998653211                                                        122344689999999


Q ss_pred             hhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC--------------------------C
Q 014344          254 EIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD--------------------------L  303 (426)
Q Consensus       254 E~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~--------------------------~  303 (426)
                      |++.+. .++.++|||||||++|+|++|.+||.+.+..+.+.++..   .+..                          .
T Consensus       182 E~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (346)
T 1ua2_A          182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF  261 (346)
T ss_dssp             HHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHC
T ss_pred             hHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhh
Confidence            999764 589999999999999999999999999998877776642   1100                          0


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                      ...+..+.+||.+||+.||.+|||++|+|+||||+...|
T Consensus       262 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          262 SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             TTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             ccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence            233578999999999999999999999999999987544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.5e-51  Score=408.61  Aligned_cols=251  Identities=26%  Similarity=0.415  Sum_probs=204.2

Q ss_pred             CCCCcEEE-eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHH-hcCCCCccee
Q 014344           14 DFSCLRIV-SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR-NVEHPLLPRL   91 (426)
Q Consensus        14 ~~~~y~i~-~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~-~l~hp~iv~l   91 (426)
                      .+++|.++ +.||+|+||+||+|++..+++.||||++...                  ..+.+|+.++. ..+||||+++
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------------------~~~~~E~~~~~~~~~hp~iv~l  120 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------------------PKARREVELHWRASQCPHIVRI  120 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------------------HHHHHHHHHHHHHTTSTTBCCE
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------------------hhHHHHHHHHHHhcCCCCcceE
Confidence            45678887 7899999999999999999999999998421                  24556888874 4579999999


Q ss_pred             eeeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---C
Q 014344           92 RGVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---N  164 (426)
Q Consensus        92 ~~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~  164 (426)
                      +++|..    ...+|+|||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   +
T Consensus       121 ~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~  200 (400)
T 1nxk_A          121 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN  200 (400)
T ss_dssp             EEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTT
T ss_pred             eEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCC
Confidence            999875    678999999999999999988655556999999999999999999999999999999999999997   7


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||+++.....                                                         ......
T Consensus       201 ~~~kl~DFG~a~~~~~~---------------------------------------------------------~~~~~~  223 (400)
T 1nxk_A          201 AILKLTDFGFAKETTSH---------------------------------------------------------NSLTTP  223 (400)
T ss_dssp             CCEEECCCTTCEECC-----------------------------------------------------------------
T ss_pred             ccEEEEecccccccCCC---------------------------------------------------------CccccC
Confidence            89999999998764311                                                         122345


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhcCC-----CCCCCCCHHHHHHHH
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE----TFYRILCRP-----PDLVGEPTPLRNLIR  315 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~~~~i~~~~-----~~~~~~~~~~~~li~  315 (426)
                      +||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.....    ....+....     +.....+..+.+||+
T Consensus       224 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  303 (400)
T 1nxk_A          224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR  303 (400)
T ss_dssp             ---CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             CCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHH
Confidence            79999999999999999999999999999999999999998764321    222332211     222456889999999


Q ss_pred             HHhccCCCCCCChHHHhcCCCcCC
Q 014344          316 RLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       316 ~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      +||+.||.+|||+.||++||||..
T Consensus       304 ~~L~~dP~~Rpt~~eil~hp~~~~  327 (400)
T 1nxk_A          304 NLLKTEPTQRMTITEFMNHPWIMQ  327 (400)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HHCCCChhHCcCHHHHhcCccccC
Confidence            999999999999999999999964

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=9.5e-51  Score=406.37  Aligned_cols=251  Identities=24%  Similarity=0.381  Sum_probs=214.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc------CCCCc
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV------EHPLL   88 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~i   88 (426)
                      ..+|++++.||+|+||+||+|.+..+++.||||++....              .....+..|+.+++.+      .|+||
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--------------~~~~~~~~E~~~l~~l~~~~~~~~~~i  161 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--------------RFHRQAAEEIRILEHLRKQDKDNTMNV  161 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--------------HHHHHHHHHHHHHHHHHTTCTTSCSCB
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--------------chHHHHHHHHHHHHHHhhccccCCcCE
Confidence            356999999999999999999999999999999985432              2234566788888877      57799


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc--
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH--  166 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~--  166 (426)
                      +++++++.....+|+||||+. ++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.  
T Consensus       162 v~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~  240 (429)
T 3kvw_A          162 IHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG  240 (429)
T ss_dssp             CCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCC
T ss_pred             EEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcc
Confidence            999999999999999999996 68999888776666999999999999999999999999999999999999999987  


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++.....                                                           ...+.+|
T Consensus       241 vkL~DFG~a~~~~~-----------------------------------------------------------~~~~~~g  261 (429)
T 3kvw_A          241 IKVIDFGSSCYEHQ-----------------------------------------------------------RVYTYIQ  261 (429)
T ss_dssp             EEECCCTTCEETTC-----------------------------------------------------------CCCSSCS
T ss_pred             eEEeecccceecCC-----------------------------------------------------------cccccCC
Confidence            99999999865421                                                           1234579


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CC----------------------
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PP----------------------  301 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~----------------------  301 (426)
                      |+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+.+..+...   ++                      
T Consensus       262 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  341 (429)
T 3kvw_A          262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRY  341 (429)
T ss_dssp             CGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTT
T ss_pred             CCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccc
Confidence            99999999999999999999999999999999999999999887766554310   00                      


Q ss_pred             ---------------------------C--------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          302 ---------------------------D--------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       302 ---------------------------~--------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                                 .        ....++.+.+||.+||++||++|||++|+|+||||+.
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~  414 (429)
T 3kvw_A          342 CTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR  414 (429)
T ss_dssp             SCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-
T ss_pred             ccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhcc
Confidence                                       0        0012567899999999999999999999999999975

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.3e-51  Score=397.58  Aligned_cols=267  Identities=22%  Similarity=0.348  Sum_probs=207.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||||++....            .....+.+.+|+.+|++++||||++++++|
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   73 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN------------RELAREKVMREVKALAKLEHPGIVRYFNAW   73 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS------------TTTHHHHHHHHHHHHTSCCCTTBCCEEEEE
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC------------chhHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            57999999999999999999999999999999985321            123456788999999999999999999998


Q ss_pred             ecCC---------------------------------------------------------eEEEEEeccCCCChHHHHH
Q 014344           96 STDK---------------------------------------------------------FVGYAIDYCPGRDLHSLRK  118 (426)
Q Consensus        96 ~~~~---------------------------------------------------------~~~lV~Ey~~gg~L~~l~~  118 (426)
                      .+..                                                         .+|+|||||+|++|.+++.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  153 (332)
T 3qd2_B           74 LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMN  153 (332)
T ss_dssp             EECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHH
T ss_pred             EEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHh
Confidence            5543                                                         4899999999999999987


Q ss_pred             Hhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhcccccc
Q 014344          119 QQSE-QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS  197 (426)
Q Consensus       119 ~~~~-~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~  197 (426)
                      .... ...++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..............        
T Consensus       154 ~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~--------  225 (332)
T 3qd2_B          154 RRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT--------  225 (332)
T ss_dssp             TCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC----------------
T ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccc--------
Confidence            5432 2355667899999999999999999999999999999999999999999999987653321100000        


Q ss_pred             ccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHH
Q 014344          198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEM  277 (426)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  277 (426)
                                                          ...........+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       226 ------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el  269 (332)
T 3qd2_B          226 ------------------------------------PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL  269 (332)
T ss_dssp             ------------------------------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHH
T ss_pred             ------------------------------------cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHH
Confidence                                                00001223455799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          278 LYGATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       278 l~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ++|..|+...  ......+...  +......++.+.+||.+||+.||.+|||++|+++||||+++
T Consensus       270 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          270 LYSFSTQMER--VRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL  332 (332)
T ss_dssp             HSCCCCHHHH--HHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred             HHcCCChhHH--HHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence            9987775321  1122222211  11112335778999999999999999999999999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=8.1e-51  Score=414.25  Aligned_cols=253  Identities=26%  Similarity=0.444  Sum_probs=215.8

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|++++.||+|+||+||+|+++.++..||||++.+.....           .....+.+|+.+|+.++||||+++++++.
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hpniv~~~~~~~  106 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-----------SSNSKLLEEVAVLKLLDHPNIMKLYDFFE  106 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC----------------CTTHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-----------hHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            6999999999999999999999999999999996543221           12456888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC---CcEEEeccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN---GHIMLVDFD  173 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~---g~ikL~DFg  173 (426)
                      +...+|+|||||.||+|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++..   +.+||+|||
T Consensus       107 ~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG  184 (494)
T 3lij_A          107 DKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG  184 (494)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECC
Confidence            9999999999999999998876653  49999999999999999999999999999999999999764   559999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++..+...                                                         ......+||+.|+||
T Consensus       185 ~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~aP  207 (494)
T 3lij_A          185 LSAVFENQ---------------------------------------------------------KKMKERLGTAYYIAP  207 (494)
T ss_dssp             TCEECBTT---------------------------------------------------------BCBCCCCSCTTTCCH
T ss_pred             CCeECCCC---------------------------------------------------------ccccccCCCcCeeCH
Confidence            98765321                                                         122345799999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |++.+ .|+.++|||||||++|+|++|.+||.+.+..+.+..+......     +...+..+++||.+||+.||.+|||+
T Consensus       208 E~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~  286 (494)
T 3lij_A          208 EVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISA  286 (494)
T ss_dssp             HHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccH
Confidence            99874 6899999999999999999999999999998888877644322     23568899999999999999999999


Q ss_pred             HHHhcCCCcCCC
Q 014344          329 EEIKGHEFFKGV  340 (426)
Q Consensus       329 ~eil~hp~f~~~  340 (426)
                      .++|+||||+..
T Consensus       287 ~e~l~hp~~~~~  298 (494)
T 3lij_A          287 QQALEHPWIKEM  298 (494)
T ss_dssp             HHHHTCHHHHHH
T ss_pred             HHHhcCcccccC
Confidence            999999999753

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.5e-51  Score=418.63  Aligned_cols=258  Identities=26%  Similarity=0.434  Sum_probs=224.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++.+....          .......+.+|+.+|+.++||||++++++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----------~~~~~~~~~~E~~~l~~l~hpniv~~~~~   94 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK----------QKTDKESLLREVQLLKQLDHPNIMKLYEF   94 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC----------BSSCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc----------cchHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            35699999999999999999999999999999999654321          12235678899999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee---ccCCcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI---QENGHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl---~~~g~ikL~D  171 (426)
                      +.+...+|+|||||.|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  172 (484)
T 3nyv_A           95 FEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID  172 (484)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred             EEeCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEe
Confidence            99999999999999999999987654  459999999999999999999999999999999999999   4678999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+...                                                         ......+||+.|+
T Consensus       173 fg~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~  195 (484)
T 3nyv_A          173 FGLSTHFEAS---------------------------------------------------------KKMKDKIGTAYYI  195 (484)
T ss_dssp             TTHHHHBCCC---------------------------------------------------------CSHHHHTTGGGTC
T ss_pred             eeeeEEcccc---------------------------------------------------------cccccCCCCcccc
Confidence            9999765321                                                         1223456999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+ .|+.++|||||||++|+|++|++||.+.+..+.+..+......     +...+..+++||.+||++||.+||
T Consensus       196 aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~  274 (484)
T 3nyv_A          196 APEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI  274 (484)
T ss_dssp             CHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSC
T ss_pred             CceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCc
Confidence            9999987 6899999999999999999999999999998888887654322     234678899999999999999999


Q ss_pred             ChHHHhcCCCcCCCCh
Q 014344          327 GVEEIKGHEFFKGVNW  342 (426)
Q Consensus       327 s~~eil~hp~f~~~~~  342 (426)
                      |+.|+|+||||+...+
T Consensus       275 s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          275 SARDALDHEWIQTYTK  290 (484)
T ss_dssp             CHHHHHTSHHHHHHTC
T ss_pred             CHHHHhhChhhccccc
Confidence            9999999999975443

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.1e-50  Score=395.21  Aligned_cols=264  Identities=23%  Similarity=0.339  Sum_probs=216.0

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      -.+++|++++.||+|+||+||+|++..+++.||||++.....           .......+.+|+.+|+.++||||++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv~~~   82 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-----------KEGFPITALREIKILQLLKHENVVNLI   82 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-----------SSSSCHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-----------cccchHHHHHHHHHHHhccCCCcccHh
Confidence            457899999999999999999999999999999999854321           112345677899999999999999999


Q ss_pred             eeeec--------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           93 GVLST--------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        93 ~~~~~--------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      +++..        .+.+|+|||||. ++|...+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~  160 (351)
T 3mi9_A           83 EICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD  160 (351)
T ss_dssp             EEEEEC--------CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             heeeccccccccCCceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC
Confidence            99977        457899999997 57777665443 459999999999999999999999999999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||++..+.....                                                    .........
T Consensus       161 ~~~kl~Dfg~a~~~~~~~~----------------------------------------------------~~~~~~~~~  188 (351)
T 3mi9_A          161 GVLKLADFGLARAFSLAKN----------------------------------------------------SQPNRYTNR  188 (351)
T ss_dssp             SCEEECCCTTCEECCCCSS----------------------------------------------------SSCCCCCSS
T ss_pred             CCEEEccchhccccccccc----------------------------------------------------ccccccCCc
Confidence            9999999999987642210                                                    011223445


Q ss_pred             ccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC-C-CCC-------------
Q 014344          245 VGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP-D-LVG-------------  305 (426)
Q Consensus       245 ~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~-~-~~~-------------  305 (426)
                      +||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+..   ..+ . ...             
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (351)
T 3mi9_A          189 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV  268 (351)
T ss_dssp             CSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCC
T ss_pred             ccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccc
Confidence            79999999999986 4589999999999999999999999999988777665532   111 1 110             


Q ss_pred             ---------------CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          306 ---------------EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       306 ---------------~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                                     .++.+.+||.+||+.||++|||++|+|+||||+...
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          269 KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             SSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             cccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence                           146689999999999999999999999999997643

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.1e-50  Score=398.39  Aligned_cols=253  Identities=25%  Similarity=0.434  Sum_probs=206.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++.+..           ........+.+|+.+++.++||||++++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~   92 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-----------QNQTHAKRAYRELVLMKCVNHKNIIGLLNV   92 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-----------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-----------CChHHHHHHHHHHHHHHhcCCCCccceEEe
Confidence            478999999999999999999999999999999985432           122345678889999999999999999999


Q ss_pred             eecCC------eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTDK------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~~------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +....      .+|+|||||. ++|.+++.    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~k  167 (371)
T 2xrw_A           93 FTPQKSLEEFQDVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK  167 (371)
T ss_dssp             ECSCCSTTTCCEEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred             eccccccccccceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEE
Confidence            97665      7899999997 57777764    2489999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++......                                                         ......+||+
T Consensus       168 l~Dfg~a~~~~~~---------------------------------------------------------~~~~~~~gt~  190 (371)
T 2xrw_A          168 ILDFGLARTAGTS---------------------------------------------------------FMMTPYVVTR  190 (371)
T ss_dssp             ECCCCC-------------------------------------------------------------------------C
T ss_pred             EEEeecccccccc---------------------------------------------------------cccCCceecC
Confidence            9999998754311                                                         1123456999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----------------------CCC-
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----------------------LVG-  305 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----------------------~~~-  305 (426)
                      .|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..++.....                      ... 
T Consensus       191 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (371)
T 2xrw_A          191 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY  270 (371)
T ss_dssp             TTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCC
T ss_pred             CccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcccccc
Confidence            999999999999999999999999999999999999999888777766532110                      000 


Q ss_pred             --------------------CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          306 --------------------EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       306 --------------------~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                                          .+..+++||.+||+.||.+|||++|+|+||||+..
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          271 SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             CHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             chhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence                                03468899999999999999999999999999853

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.3e-50  Score=379.21  Aligned_cols=261  Identities=27%  Similarity=0.385  Sum_probs=218.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+..++|++++.||+|+||.||+|.+..+++.||||++........          .....+.+|+.+++.++||||+
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~   74 (276)
T 2h6d_A            5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSL----------DVVGKIKREIQNLKLFRHPHII   74 (276)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHTCCCTTBC
T ss_pred             cCcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccch----------hHHHHHHHHHHHHhcCCCCCEe
Confidence            345678899999999999999999999999999999999976543221          2346788899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++...+..|+||||++|++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        75 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l  152 (276)
T 2h6d_A           75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKI  152 (276)
T ss_dssp             CEEEEEECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEE
T ss_pred             EEEEEEecCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEE
Confidence            99999999999999999999999999987653  4999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                         .....+||+.
T Consensus       153 ~dfg~~~~~~~~~---------------------------------------------------------~~~~~~~~~~  175 (276)
T 2h6d_A          153 ADFGLSNMMSDGE---------------------------------------------------------FLRTSCGSPN  175 (276)
T ss_dssp             CCCCGGGCCCC---------------------------------------------------------------------
T ss_pred             eecccccccCCCc---------------------------------------------------------ceecccCCcc
Confidence            9999987653211                                                         1123468999


Q ss_pred             CccchhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          250 YVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       250 y~aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      |+|||++.+..+ +.++|||||||++|+|++|+.||...+....+..+...... ....+..+.+||.+||+.||.+|||
T Consensus       176 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  255 (276)
T 2h6d_A          176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRAT  255 (276)
T ss_dssp             -CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCC
Confidence            999999988766 68999999999999999999999998887777766544332 2345788999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      ++++++||||+.
T Consensus       256 ~~~~l~h~~~~~  267 (276)
T 2h6d_A          256 IKDIREHEWFKQ  267 (276)
T ss_dssp             HHHHHHSHHHHT
T ss_pred             HHHHHhChhhcc
Confidence            999999999964

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=6.9e-51  Score=390.27  Aligned_cols=253  Identities=25%  Similarity=0.359  Sum_probs=203.5

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~   94 (426)
                      ++|+++++||+|+||+||+|++..+++.||||++.....           ..........|+..+..+ .||||++++++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~  125 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-----------GPKDRARKLAEVGSHEKVGQHPCCVRLEQA  125 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-----------SHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-----------ChHHHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            569999999999999999999999999999998743211           112223444455555554 89999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.+.+.+|+||||| +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus       126 ~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~  203 (311)
T 3p1a_A          126 WEEGGILYLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL  203 (311)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred             EEeCCEEEEEEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEcccee
Confidence            99999999999999 678888876654 4599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +.......                                                         ......||+.|+|||
T Consensus       204 a~~~~~~~---------------------------------------------------------~~~~~~gt~~y~aPE  226 (311)
T 3p1a_A          204 LVELGTAG---------------------------------------------------------AGEVQEGDPRYMAPE  226 (311)
T ss_dssp             CEECC---------------------------------------------------------------CCCCCGGGCCGG
T ss_pred             eeecccCC---------------------------------------------------------CCcccCCCccccCHh
Confidence            87653211                                                         122345999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ++.+ .++.++|||||||++|||++|..|+.+.............+......+..+.+||.+||+.||++|||++|+|+|
T Consensus       227 ~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          227 LLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             GGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            9987 689999999999999999999777765433222211111111123457889999999999999999999999999


Q ss_pred             CCcCC
Q 014344          335 EFFKG  339 (426)
Q Consensus       335 p~f~~  339 (426)
                      |||+.
T Consensus       306 p~~~~  310 (311)
T 3p1a_A          306 PVLRQ  310 (311)
T ss_dssp             GGGSC
T ss_pred             ccccC
Confidence            99974

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3e-51  Score=396.98  Aligned_cols=267  Identities=25%  Similarity=0.411  Sum_probs=218.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.+........     ........+..|+.+|+.++||||+++++++
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~   98 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCW-----IEDPKLGKVTLEIAILSRVEHANIIKVLDIF   98 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSE-----EEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccc-----cchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            46999999999999999999999999999999996653221100     0111334567799999999999999999999


Q ss_pred             ecCCeEEEEEeccCCC-ChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           96 STDKFVGYAIDYCPGR-DLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg-~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      .+.+.+++||||+.+| +|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~  176 (335)
T 3dls_A           99 ENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGS  176 (335)
T ss_dssp             ECSSEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             eeCCEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence            9999999999999766 999987654  3499999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +......                                                         ......+||+.|+|||
T Consensus       177 a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~aPE  199 (335)
T 3dls_A          177 AAYLERG---------------------------------------------------------KLFYTFCGTIEYCAPE  199 (335)
T ss_dssp             CEECCTT---------------------------------------------------------CCBCEECSCGGGCCHH
T ss_pred             ceECCCC---------------------------------------------------------CceeccCCCccccChh
Confidence            9765321                                                         1223457999999999


Q ss_pred             hhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          255 IIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       255 ~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ++.+..+ +.++|||||||++|+|++|..||......     ...........+..+.+||.+||+.||.+|||++++++
T Consensus       200 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----VEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             HHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----TTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----HhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9998877 89999999999999999999999763321     11112223345889999999999999999999999999


Q ss_pred             CCCcCC------CChhhhhhccCC
Q 014344          334 HEFFKG------VNWELLLKISRP  351 (426)
Q Consensus       334 hp~f~~------~~~~~~~~~~~~  351 (426)
                      ||||+.      ..|+.+.....|
T Consensus       275 hp~~~~~~~~~~~~~~~~~~~~~~  298 (335)
T 3dls_A          275 DPWVTQPVNLADYTWEEVFRVNKP  298 (335)
T ss_dssp             CTTTTCCCCGGGCCHHHHC-----
T ss_pred             CccccCCccccccCHHHHhhhcCC
Confidence            999965      567776554443

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.7e-51  Score=408.21  Aligned_cols=266  Identities=26%  Similarity=0.418  Sum_probs=209.2

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|.+..+++.||||++.+.......     .........+.+|+.+|++++||||++++++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~  208 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS-----AREADPALNVETEIEILKKLNHPCIIKIKNF  208 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC-------------CCHHHHHHHHHHCCCTTBCCCCEE
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccc-----cccchhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            36799999999999999999999999999999999765432211     0112233467889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC---cEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG---HIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g---~ikL~D  171 (426)
                      +.. +..|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.++   .+||+|
T Consensus       209 ~~~-~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~D  285 (419)
T 3i6u_A          209 FDA-EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITD  285 (419)
T ss_dssp             EES-SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred             Eec-CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEee
Confidence            854 5579999999999999876543  4599999999999999999999999999999999999997544   599999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+++.....                                                         ......+||+.|+
T Consensus       286 FG~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~  308 (419)
T 3i6u_A          286 FGHSKILGET---------------------------------------------------------SLMRTLCGTPTYL  308 (419)
T ss_dssp             SSTTTSCC--------------------------------------------------------------------CTTC
T ss_pred             cccceecCCC---------------------------------------------------------ccccccCCCCCcc
Confidence            9999765321                                                         1223457999999


Q ss_pred             cchhhcC---CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhcCCCC-----CCCCCHHHHHHHHHHhccCC
Q 014344          252 APEIIEG---KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET-FYRILCRPPD-----LVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       252 aPE~~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP  322 (426)
                      |||++.+   ..|+.++|||||||++|+|++|++||........ ...+......     ....+..+.+||.+||+.||
T Consensus       309 aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  388 (419)
T 3i6u_A          309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP  388 (419)
T ss_dssp             CTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSST
T ss_pred             CceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCCh
Confidence            9999864   5678999999999999999999999987544322 2223222211     13457889999999999999


Q ss_pred             CCCCChHHHhcCCCcCCCChhhh
Q 014344          323 TKRIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~~~~~~~  345 (426)
                      .+|||++|+|+||||++.+|...
T Consensus       389 ~~Rps~~e~l~hp~~~~~~~~~~  411 (419)
T 3i6u_A          389 KARFTTEEALRHPWLQDEDMKRK  411 (419)
T ss_dssp             TTSCCHHHHHHSGGGCCHHHHHH
T ss_pred             hHCcCHHHHhCCcccCChhHHHH
Confidence            99999999999999998777654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=5.8e-51  Score=398.53  Aligned_cols=262  Identities=28%  Similarity=0.449  Sum_probs=220.7

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+..++|++++.||+|+||+||+|++..+++.||+|++....            .....+.+.+|+.+|+.++||||+
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~iv   94 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI------------KPAIRNQIIRELQVLHECNSPYIV   94 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC------------CHHHHHHHHHHHGGGGGCCCTTBC
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc------------CHHHHHHHHHHHHHHHHCCCCCEE
Confidence            45677788999999999999999999999999999999985431            123456788999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeeccCCcEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++..++.+|+|||||+|++|.+++....  .+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+|
T Consensus        95 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~k  172 (360)
T 3eqc_A           95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK  172 (360)
T ss_dssp             CEEEEEEETTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEE
T ss_pred             EEeEEEEECCEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEE
Confidence            99999999999999999999999999987654  499999999999999999999996 999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++......                                                          .....+||+
T Consensus       173 l~Dfg~~~~~~~~----------------------------------------------------------~~~~~~gt~  194 (360)
T 3eqc_A          173 LCDFGVSGQLIDS----------------------------------------------------------MANSFVGTR  194 (360)
T ss_dssp             ECCCCCCHHHHHH----------------------------------------------------------C----CCCC
T ss_pred             EEECCCCcccccc----------------------------------------------------------cccCCCCCC
Confidence            9999998654210                                                          122346999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---------------------------------
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR---------------------------------  295 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~---------------------------------  295 (426)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...+..+....                                 
T Consensus       195 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (360)
T 3eqc_A          195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPP  274 (360)
T ss_dssp             TTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------C
T ss_pred             CeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCc
Confidence            99999999999999999999999999999999999988765443211                                 


Q ss_pred             ---------HhcC-CCCC--CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          296 ---------ILCR-PPDL--VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       296 ---------i~~~-~~~~--~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                               +... .+..  ...+..+.+||.+||+.||++|||++|+|+||||++.+|+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  334 (360)
T 3eqc_A          275 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE  334 (360)
T ss_dssp             CCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHHS
T ss_pred             ccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchHh
Confidence                     1111 1111  1247789999999999999999999999999999865544

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=4.4e-50  Score=381.16  Aligned_cols=261  Identities=30%  Similarity=0.516  Sum_probs=227.1

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ....++|++++.||+|+||.||+|.+..+++.||+|++.+....          .......+..|+.+++.+.||||+++
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----------~~~~~~~~~~e~~~l~~l~h~~iv~~   80 (294)
T 2rku_A           11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL----------KPHQREKMSMEISIHRSLAHQHVVGF   80 (294)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC----------SHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc----------CHHHHHHHHHHHHHHHhCCCCCEeee
Confidence            34567899999999999999999999999999999998654321          12345678889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++.+.+..|+||||++|++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        81 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~d  158 (294)
T 2rku_A           81 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGD  158 (294)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             eeeeccCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEe
Confidence            999999999999999999999999877643  499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                        ......+||+.|+
T Consensus       159 fg~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~  182 (294)
T 2rku_A          159 FGLATKVEYDG--------------------------------------------------------ERKKVLCGTPNYI  182 (294)
T ss_dssp             CTTCEECCSTT--------------------------------------------------------CCBCCCCSCCSSC
T ss_pred             ccCceecccCc--------------------------------------------------------cccccccCCCCcC
Confidence            99987653211                                                        1123346999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |||++.+..++.++|||||||++|+|++|+.||......+.+..+...... ....+..+.+||.+||+.||++|||+++
T Consensus       183 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  262 (294)
T 2rku_A          183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINE  262 (294)
T ss_dssp             CHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             CcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHH
Confidence            999999999999999999999999999999999999888877777654433 3356788999999999999999999999


Q ss_pred             HhcCCCcCCC
Q 014344          331 IKGHEFFKGV  340 (426)
Q Consensus       331 il~hp~f~~~  340 (426)
                      +++||||+..
T Consensus       263 ll~~~~~~~~  272 (294)
T 2rku_A          263 LLNDEFFTSG  272 (294)
T ss_dssp             GGGSHHHHTS
T ss_pred             HhhChheecC
Confidence            9999999753

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=8e-51  Score=393.11  Aligned_cols=265  Identities=24%  Similarity=0.371  Sum_probs=219.1

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .-.+++|++++.||+|+||.||+|++..+++.||||++....           ......+.+.+|+.+++.++||||+++
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~~iv~~   89 (331)
T 4aaa_A           21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-----------DDKMVKKIAMREIKLLKQLRHENLVNL   89 (331)
T ss_dssp             CBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-----------SCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-----------CchHHHHHHHHHHHHHhhCCCCCEeeE
Confidence            346788999999999999999999999999999999984432           122234567889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++.+.+..|+||||+.+++|..++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~D  167 (331)
T 4aaa_A           90 LEVCKKKKRWYLVFEFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCD  167 (331)
T ss_dssp             EEEEEETTEEEEEEECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEeecCCEEEEEEecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEe
Confidence            99999999999999999999998875543  3499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+....                                                        ......+||+.|+
T Consensus       168 fg~~~~~~~~~--------------------------------------------------------~~~~~~~~t~~y~  191 (331)
T 4aaa_A          168 FGFARTLAAPG--------------------------------------------------------EVYDDEVATRWYR  191 (331)
T ss_dssp             CTTC--------------------------------------------------------------------CCCCCTTC
T ss_pred             CCCceeecCCc--------------------------------------------------------cccCCCcCCcccc
Confidence            99987653211                                                        1122346899999


Q ss_pred             cchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----------------------CCC------
Q 014344          252 APEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----------------------PPD------  302 (426)
Q Consensus       252 aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~----------------------~~~------  302 (426)
                      |||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+...                      .+.      
T Consensus       192 aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (331)
T 4aaa_A          192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREP  271 (331)
T ss_dssp             CHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCC
T ss_pred             CcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccch
Confidence            99999875 6899999999999999999999999998877665554310                      000      


Q ss_pred             ----CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhhh
Q 014344          303 ----LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       303 ----~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~~  345 (426)
                          ....+..+.+||.+||+.||.+|||+.|+|+||||+...|...
T Consensus       272 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  318 (331)
T 4aaa_A          272 LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAER  318 (331)
T ss_dssp             HHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGGHHHH
T ss_pred             hhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCChhhh
Confidence                1245788999999999999999999999999999987665543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=6.8e-51  Score=399.25  Aligned_cols=253  Identities=28%  Similarity=0.448  Sum_probs=200.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|.+..+|+.||||++....           ......+++.+|+.+|+.++||||+++++++
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~   97 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-----------QSIIHAKRTYRELRLLKHMKHENVIGLLDVF   97 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-----------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-----------cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            67999999999999999999999999999999985421           1223456788899999999999999999998


Q ss_pred             ecC------CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           96 STD------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        96 ~~~------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ...      ..+|+||||+ +++|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        98 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL  173 (367)
T 2fst_X           98 TPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI  173 (367)
T ss_dssp             CSCSSGGGCCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             ecCCccccCCeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEE
Confidence            654      6689999999 7999988764   35999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++....                                                           .....+||+.
T Consensus       174 ~DFG~a~~~~~-----------------------------------------------------------~~~~~~~t~~  194 (367)
T 2fst_X          174 LDFGLARHTAD-----------------------------------------------------------EMTGYVATRW  194 (367)
T ss_dssp             CC--------------------------------------------------------------------------CCCT
T ss_pred             eeccccccccc-----------------------------------------------------------cCCCcCcCcC
Confidence            99999875421                                                           1223579999


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC--------------------CC---
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP--------------------PD---  302 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~--------------------~~---  302 (426)
                      |+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..++.   .+                    +.   
T Consensus       195 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  274 (367)
T 2fst_X          195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK  274 (367)
T ss_dssp             TCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCC
T ss_pred             ccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCC
Confidence            999999987 6789999999999999999999999999888776655532   11                    00   


Q ss_pred             ------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          303 ------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       303 ------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                            ..+.++.+.+||.+||+.||.+|||++|+|+||||+....
T Consensus       275 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             CCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             CCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence                  1244678999999999999999999999999999987653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=4.3e-50  Score=388.77  Aligned_cols=260  Identities=30%  Similarity=0.520  Sum_probs=226.4

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ....+|++++.||+|+||.||+|++..+++.||+|++.+....          .......+..|+.+++.++||||++++
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----------~~~~~~~~~~E~~~l~~l~h~~iv~~~  107 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL----------KPHQREKMSMEISIHRSLAHQHVVGFH  107 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC----------SHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc----------CHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            4456899999999999999999999999999999999654321          123456788899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++.+.+.+|+|||||.|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       108 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Df  185 (335)
T 2owb_A          108 GFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDF  185 (335)
T ss_dssp             EEEECSSEEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCC
T ss_pred             EEEecCCeEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeec
Confidence            9999999999999999999999987764  34999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                        ......+||+.|+|
T Consensus       186 g~~~~~~~~~--------------------------------------------------------~~~~~~~gt~~y~a  209 (335)
T 2owb_A          186 GLATKVEYDG--------------------------------------------------------ERKKVLCGTPNYIA  209 (335)
T ss_dssp             TTCEECCSTT--------------------------------------------------------CCBCCCCSCCSSCC
T ss_pred             cCceecccCc--------------------------------------------------------ccccccCCCccccC
Confidence            9987653211                                                        11233569999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      ||++.+..++.++|||||||++|+|++|+.||......+.+..+...... ....+..+.+||.+||+.||++|||++++
T Consensus       210 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el  289 (335)
T 2owb_A          210 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINEL  289 (335)
T ss_dssp             HHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            99999999999999999999999999999999998888777766544333 33557889999999999999999999999


Q ss_pred             hcCCCcCCC
Q 014344          332 KGHEFFKGV  340 (426)
Q Consensus       332 l~hp~f~~~  340 (426)
                      ++||||+..
T Consensus       290 l~~~~~~~~  298 (335)
T 2owb_A          290 LNDEFFTSG  298 (335)
T ss_dssp             GGSHHHHTS
T ss_pred             hcCccccCC
Confidence            999999754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=7.8e-50  Score=378.66  Aligned_cols=256  Identities=21%  Similarity=0.351  Sum_probs=214.1

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ..+...|++.+.||+|+||+||+|.+..++..||+|++......           ....+.+.+|+.+|+.++||||+++
T Consensus        22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~iv~~   90 (290)
T 1t4h_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-----------KSERQRFKEEAEMLKGLQHPNIVRF   90 (290)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-----------HHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-----------HHHHHHHHHHHHHHHhCCCCCeeee
Confidence            34455699999999999999999999999999999998654322           2245678899999999999999999


Q ss_pred             eeeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeeec-cC
Q 014344           92 RGVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQ-EN  164 (426)
Q Consensus        92 ~~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiLl~-~~  164 (426)
                      ++++..    ...+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++|  |+||||||+|||++ .+
T Consensus        91 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~  168 (290)
T 1t4h_A           91 YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT  168 (290)
T ss_dssp             EEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT
T ss_pred             eeeeccccCCCceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCC
Confidence            999865    46799999999999999998765  34999999999999999999999999  99999999999998 78


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||++......                                                          .....
T Consensus       169 ~~~kl~Dfg~~~~~~~~----------------------------------------------------------~~~~~  190 (290)
T 1t4h_A          169 GSVKIGDLGLATLKRAS----------------------------------------------------------FAKAV  190 (290)
T ss_dssp             SCEEECCTTGGGGCCTT----------------------------------------------------------SBEES
T ss_pred             CCEEEeeCCCccccccc----------------------------------------------------------ccccc
Confidence            99999999998654211                                                          12344


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhcCCC---CCCCCCHHHHHHHHHHhcc
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF-YRILCRPP---DLVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~-~~i~~~~~---~~~~~~~~~~~li~~~L~~  320 (426)
                      +||+.|+|||++.+ .++.++|||||||++|+|++|+.||......... ..+.....   .....++.+.+||.+||+.
T Consensus       191 ~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  269 (290)
T 1t4h_A          191 IGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQ  269 (290)
T ss_dssp             CSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCS
T ss_pred             cCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccC
Confidence            69999999999875 4899999999999999999999999885554444 33332211   1123467899999999999


Q ss_pred             CCCCCCChHHHhcCCCcCC
Q 014344          321 DPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       321 dP~~R~s~~eil~hp~f~~  339 (426)
                      ||.+|||++++++||||++
T Consensus       270 dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          270 NKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             SGGGSCCHHHHHTSGGGC-
T ss_pred             ChhhCCCHHHHhhCccccc
Confidence            9999999999999999975

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.3e-50  Score=382.29  Aligned_cols=260  Identities=27%  Similarity=0.485  Sum_probs=222.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||+|++.+......       ........+.+|+.+++.++||||+++++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   77 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSS-------RRGVSREEIEREVNILREIRHPNIITLHDIF   77 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTC-------SSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccccc-------ccchHHHHHHHHHHHHHhCCCCCeeehhhee
Confidence            459999999999999999999999999999999965432211       1112356788999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC----cEEEec
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG----HIMLVD  171 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g----~ikL~D  171 (426)
                      .+....|+||||+++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||+++.++    .+||+|
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~d  155 (283)
T 3bhy_A           78 ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLID  155 (283)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred             cCCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEe
Confidence            99999999999999999999987643  499999999999999999999999999999999999999877    899999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                         ......||+.|+
T Consensus       156 fg~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~  178 (283)
T 3bhy_A          156 FGIAHKIEAGN---------------------------------------------------------EFKNIFGTPEFV  178 (283)
T ss_dssp             CTTCEECC-----------------------------------------------------------------CCCGGGC
T ss_pred             cccceeccCCC---------------------------------------------------------cccccCCCcCcc
Confidence            99987653211                                                         122346899999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..++.++|||||||++|+|++|..||.+.+..+....+.......     ...+..+.+||.+||..||++||
T Consensus       179 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  258 (283)
T 3bhy_A          179 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM  258 (283)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSC
T ss_pred             CcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCc
Confidence            9999999999999999999999999999999999998888777765443322     35578899999999999999999


Q ss_pred             ChHHHhcCCCcCCCC
Q 014344          327 GVEEIKGHEFFKGVN  341 (426)
Q Consensus       327 s~~eil~hp~f~~~~  341 (426)
                      |+.++++||||+.+.
T Consensus       259 s~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          259 TIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CHHHHHHCHHHHHHH
T ss_pred             CHHHHHhCHHHHHHH
Confidence            999999999997643

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.2e-51  Score=401.44  Aligned_cols=253  Identities=29%  Similarity=0.532  Sum_probs=209.6

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ...++|++++.||+|+||+||+|++..+++.||||++....                 ....+|+.+|+.++||||++++
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----------------~~~~~E~~il~~l~hpnIv~l~   66 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----------------RYKNRELDIMKVLDHVNIIKLV   66 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-----------------TSCCHHHHHHTTCCCTTBCCEE
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-----------------chHHHHHHHHHHcCCCCccchh
Confidence            34567999999999999999999999999999999984321                 1122599999999999999999


Q ss_pred             eeeec--------------------------------------CCeEEEEEeccCCCChHHHHHH--hccCCCCHHHHHH
Q 014344           93 GVLST--------------------------------------DKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRF  132 (426)
Q Consensus        93 ~~~~~--------------------------------------~~~~~lV~Ey~~gg~L~~l~~~--~~~~~l~~~~~~~  132 (426)
                      ++|..                                      ..++++|||||+ ++|.+++..  .....+++..++.
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~  145 (383)
T 3eb0_A           67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISI  145 (383)
T ss_dssp             EEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             heeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHH
Confidence            99843                                      445899999998 587776653  2345699999999


Q ss_pred             HHHHHHHHHHHHHHCCCcccCCCCCCeeec-cCCcEEEecccccccCCCCCCCCCcchhhcccccccccccccccccccc
Q 014344          133 YAAELVLALEYLHNMGIVYRDLKPENIMIQ-ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCS  211 (426)
Q Consensus       133 ~~~qil~aL~~LH~~giiHrDlKp~NiLl~-~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (426)
                      ++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+....                             
T Consensus       146 i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-----------------------------  196 (383)
T 3eb0_A          146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-----------------------------  196 (383)
T ss_dssp             HHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-----------------------------
T ss_pred             HHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-----------------------------
Confidence            999999999999999999999999999998 68999999999998653211                             


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 014344          212 SGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRK  290 (426)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~  290 (426)
                                                  .....+||+.|+|||++.+. .++.++||||+||++|+|++|++||.+.+..
T Consensus       197 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  248 (383)
T 3eb0_A          197 ----------------------------PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI  248 (383)
T ss_dssp             ----------------------------CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ----------------------------CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH
Confidence                                        12344689999999998875 4899999999999999999999999999888


Q ss_pred             HHHHHHhc---CC-----------------C----------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          291 ETFYRILC---RP-----------------P----------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       291 ~~~~~i~~---~~-----------------~----------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      +.+.+++.   .+                 +          .....+..+.+||.+||++||.+|||+.|+|+||||+.+
T Consensus       249 ~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          249 DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence            77766642   10                 0          112357789999999999999999999999999999764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.2e-49  Score=378.66  Aligned_cols=270  Identities=29%  Similarity=0.394  Sum_probs=224.1

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      --.++|++++.||+|+||.||+|++..+++.||||++..........    .......+.+.+|+.+|+++. ||||+++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~----~~~~~~~~~~~~e~~~l~~l~~h~~i~~~   89 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA----EEVQELREATLKEVDILRKVSGHPNIIQL   89 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCH----HHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCH----HHHHHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            34678999999999999999999999999999999996532100000    000123467888999999996 9999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++..+...|+||||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~d  167 (298)
T 1phk_A           90 KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD  167 (298)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             eeeeccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEec
Confidence            99999999999999999999999998764  3499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                         .....+||+.|+
T Consensus       168 fg~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~  190 (298)
T 1phk_A          168 FGFSCQLDPGE---------------------------------------------------------KLREVCGTPSYL  190 (298)
T ss_dssp             CTTCEECCTTC---------------------------------------------------------CBCCCCSCGGGC
T ss_pred             ccchhhcCCCc---------------------------------------------------------ccccccCCcccc
Confidence            99987653211                                                         123346899999


Q ss_pred             cchhhc------CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhcc
Q 014344          252 APEIIE------GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       252 aPE~~~------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~  320 (426)
                      |||++.      ...++.++|||||||++|+|++|+.||...+.......+......     ....+..+.+||.+||..
T Consensus       191 aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  270 (298)
T 1phk_A          191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVV  270 (298)
T ss_dssp             CHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCS
T ss_pred             CHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccC
Confidence            999985      456789999999999999999999999998887777766543322     234578899999999999


Q ss_pred             CCCCCCChHHHhcCCCcCCCChhhh
Q 014344          321 DPTKRIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       321 dP~~R~s~~eil~hp~f~~~~~~~~  345 (426)
                      ||.+|||+.++++||||++..++.+
T Consensus       271 dp~~Rps~~~ll~h~~~~~~~~~~~  295 (298)
T 1phk_A          271 QPQKRYTAEEALAHPFFQQYVVEEV  295 (298)
T ss_dssp             SGGGSCCHHHHTTSGGGCTTC----
T ss_pred             CcccCCCHHHHHhChHhhhccchhh
Confidence            9999999999999999998877654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=4.8e-50  Score=390.51  Aligned_cols=251  Identities=27%  Similarity=0.413  Sum_probs=216.5

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++++.||+|+||+||+|++..+++.||||++.....          ......+.+.+|+.+|+.++||||+++++++.
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  124 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK----------QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL  124 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS----------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc----------cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            49999999999999999999999999999999854321          11234567889999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .++..|+|||||. |+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       125 ~~~~~~lv~e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  202 (348)
T 1u5q_A          125 REHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS  202 (348)
T ss_dssp             ETTEEEEEEECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred             ECCeEEEEEecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence            9999999999997 67877765443 459999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ....                                                            ....+||+.|+|||++
T Consensus       203 ~~~~------------------------------------------------------------~~~~~gt~~y~aPE~~  222 (348)
T 1u5q_A          203 IMAP------------------------------------------------------------ANSFVGTPYWMAPEVI  222 (348)
T ss_dssp             SSSS------------------------------------------------------------BCCCCSCGGGCCHHHH
T ss_pred             ecCC------------------------------------------------------------CCcccCCcceeCHhhh
Confidence            5421                                                            1234699999999998


Q ss_pred             c---CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          257 E---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       257 ~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      .   +..++.++|||||||++|||++|+.||.+.+.......+.....   .....+..+.+||.+||+.||++|||+++
T Consensus       223 ~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~  302 (348)
T 1u5q_A          223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEV  302 (348)
T ss_dssp             HTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHH
Confidence            5   46789999999999999999999999999888777666654322   22356788999999999999999999999


Q ss_pred             HhcCCCcCC
Q 014344          331 IKGHEFFKG  339 (426)
Q Consensus       331 il~hp~f~~  339 (426)
                      +++||||..
T Consensus       303 ll~h~~~~~  311 (348)
T 1u5q_A          303 LLKHRFVLR  311 (348)
T ss_dssp             HTTCHHHHS
T ss_pred             HhhChhhhc
Confidence            999999954

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=3.8e-50  Score=387.72  Aligned_cols=253  Identities=26%  Similarity=0.447  Sum_probs=210.0

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      ...++|++++.||+|+||+||+|++..+++.||||++...                ..+.+.+|+.+|+.+. ||||+++
T Consensus        33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----------------~~~~~~~E~~~l~~l~~~~~i~~~   96 (330)
T 3nsz_A           33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----------------KKKKIKREIKILENLRGGPNIITL   96 (330)
T ss_dssp             EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----------------CHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----------------chHHHHHHHHHHHHcCCCCCEEEe
Confidence            3457899999999999999999999999999999998421                2356788999999997 9999999


Q ss_pred             eeeeec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-cEE
Q 014344           92 RGVLST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-HIM  168 (426)
Q Consensus        92 ~~~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-~ik  168 (426)
                      ++++.+  ....++||||+.+++|..++.     .+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|
T Consensus        97 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~k  171 (330)
T 3nsz_A           97 ADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR  171 (330)
T ss_dssp             EEEEECTTTCCEEEEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEE
T ss_pred             eeeeccCCCCceEEEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEE
Confidence            999987  678999999999999988763     289999999999999999999999999999999999999777 899


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++.......                                                         .....+||+
T Consensus       172 l~Dfg~a~~~~~~~---------------------------------------------------------~~~~~~~~~  194 (330)
T 3nsz_A          172 LIDWGLAEFYHPGQ---------------------------------------------------------EYNVRVASR  194 (330)
T ss_dssp             ECCCTTCEECCTTC---------------------------------------------------------CCCSCCSCG
T ss_pred             EEeCCCceEcCCCC---------------------------------------------------------ccccccccc
Confidence            99999997653211                                                         123346899


Q ss_pred             CCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHh-------------cCC-------------
Q 014344          249 EYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRIL-------------CRP-------------  300 (426)
Q Consensus       249 ~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~-------------~~~-------------  300 (426)
                      .|+|||++.+ ..++.++|||||||++|+|++|+.||... +..+....+.             ...             
T Consensus       195 ~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (330)
T 3nsz_A          195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGR  274 (330)
T ss_dssp             GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCC
T ss_pred             cccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhh
Confidence            9999999987 67899999999999999999999999543 3322222211             000             


Q ss_pred             ------------CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          301 ------------PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       301 ------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                                  ......+..+.+||.+||+.||.+|||++|+|+||||+++.|+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  329 (330)
T 3nsz_A          275 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD  329 (330)
T ss_dssp             CCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC--
T ss_pred             ccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhccC
Confidence                        0011147889999999999999999999999999999988764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=6.6e-50  Score=380.40  Aligned_cols=254  Identities=26%  Similarity=0.410  Sum_probs=212.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||+|++....          .......+++.+|+.+++.++||||+++++++
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~   80 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP----------REKEETLKRFEREVHNSSQLSHQNIVSMIDVD   80 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCS----------SCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCc----------cccHHHHHHHHHHHHHHhcCCCCCCceEEEee
Confidence            45999999999999999999999999999999985432          12234467889999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..++.+|+|||||+|++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~  158 (294)
T 4eqm_A           81 EEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA  158 (294)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred             eeCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCc
Confidence            99999999999999999999987653  4999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                       .......+||+.|+|||+
T Consensus       159 ~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~aPE~  183 (294)
T 4eqm_A          159 KALSETS-------------------------------------------------------LTQTNHVLGTVQYFSPEQ  183 (294)
T ss_dssp             TTC--------------------------------------------------------------------CCSSCCHHH
T ss_pred             ccccccc-------------------------------------------------------ccccCccccCccccCHhH
Confidence            7653211                                                       112334579999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC------CCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD------LVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~------~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      +.+..++.++|||||||++|+|++|+.||.+.+......+.......      ....+..+.++|.+||+.||.+||+..
T Consensus       184 ~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~  263 (294)
T 4eqm_A          184 AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTI  263 (294)
T ss_dssp             HHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSH
T ss_pred             hcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccH
Confidence            99999999999999999999999999999999887766555543221      235688899999999999999999655


Q ss_pred             HHhcCCC
Q 014344          330 EIKGHEF  336 (426)
Q Consensus       330 eil~hp~  336 (426)
                      +.+.+.|
T Consensus       264 ~~l~~~l  270 (294)
T 4eqm_A          264 QEMKDDL  270 (294)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5555544

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=7.7e-50  Score=391.60  Aligned_cols=259  Identities=29%  Similarity=0.443  Sum_probs=219.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~   94 (426)
                      ++|++.+.||+|+||.||+|++..+|+.||||++.........     .......+.+.+|+.+++.+ +||||++++++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~-----~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  168 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSP-----EQLEEVREATRRETHILRQVAGHPHIITLIDS  168 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCH-----HHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCH-----HHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            4699999999999999999999999999999998653210000     00012346788899999999 79999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +......|+||||++|++|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||++.+|.+||+|||+
T Consensus       169 ~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~  246 (365)
T 2y7j_A          169 YESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF  246 (365)
T ss_dssp             EEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence            99999999999999999999998754  3499999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      +..+...                                                         ......+||+.|+|||
T Consensus       247 ~~~~~~~---------------------------------------------------------~~~~~~~gt~~y~aPE  269 (365)
T 2y7j_A          247 SCHLEPG---------------------------------------------------------EKLRELCGTPGYLAPE  269 (365)
T ss_dssp             CEECCTT---------------------------------------------------------CCBCCCCSCGGGCCHH
T ss_pred             ccccCCC---------------------------------------------------------cccccCCCCCCccChh
Confidence            8766421                                                         1223457999999999


Q ss_pred             hhcC------CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCC
Q 014344          255 IIEG------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       255 ~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~  323 (426)
                      ++.+      ..++.++|||||||++|+|++|+.||.+.+.......+.......     ...+..+.+||.+||+.||+
T Consensus       270 ~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  349 (365)
T 2y7j_A          270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPE  349 (365)
T ss_dssp             HHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTT
T ss_pred             hccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChh
Confidence            9864      357899999999999999999999999988877777665443222     35578899999999999999


Q ss_pred             CCCChHHHhcCCCcC
Q 014344          324 KRIGVEEIKGHEFFK  338 (426)
Q Consensus       324 ~R~s~~eil~hp~f~  338 (426)
                      +|||++++|+||||+
T Consensus       350 ~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          350 ARLTAEQALQHPFFE  364 (365)
T ss_dssp             TSCCHHHHHHSGGGC
T ss_pred             HCcCHHHHhcCcccC
Confidence            999999999999996

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=7.5e-50  Score=381.50  Aligned_cols=251  Identities=30%  Similarity=0.453  Sum_probs=218.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||+|++.....             .....+.+|+.+++.++||||+++++++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   75 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-------------FRDSSLENEIAVLKKIKHENIVTLEDIY   75 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------------------HHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-------------cchHHHHHHHHHHHhCCCCCeeehhhhc
Confidence            469999999999999999999999999999999854321             1224677899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee---ccCCcEEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI---QENGHIMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl---~~~g~ikL~DF  172 (426)
                      .+...+|+||||++|++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+||
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Df  153 (304)
T 2jam_A           76 ESTTHYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDF  153 (304)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred             ccCCEEEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccC
Confidence            99999999999999999999876643  49999999999999999999999999999999999999   77899999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.....                                                          ......+||+.|+|
T Consensus       154 g~~~~~~~----------------------------------------------------------~~~~~~~~~~~y~a  175 (304)
T 2jam_A          154 GLSKMEQN----------------------------------------------------------GIMSTACGTPGYVA  175 (304)
T ss_dssp             STTCCCCC----------------------------------------------------------BTTHHHHSCCCBCC
T ss_pred             CcceecCC----------------------------------------------------------CccccccCCCCccC
Confidence            99864321                                                          11233469999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----DLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..++.++|||||||++|+|++|..||...+....+..+.....     .....+..+.+||.+||..||.+|||
T Consensus       176 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  255 (304)
T 2jam_A          176 PEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYT  255 (304)
T ss_dssp             TTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCC
T ss_pred             hHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC
Confidence            9999999999999999999999999999999999888877777654322     22356889999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      ++++++||||++
T Consensus       256 ~~~~l~h~~~~~  267 (304)
T 2jam_A          256 CEKALSHPWIDG  267 (304)
T ss_dssp             HHHHHTSHHHHS
T ss_pred             HHHHhcCccccC
Confidence            999999999965

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=7.5e-51  Score=389.87  Aligned_cols=262  Identities=25%  Similarity=0.388  Sum_probs=216.4

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ..-.++|++++.||+|+||.||+|++..+++.||||++.....          ........+.+|+.+++.++||||+++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~hp~iv~~   77 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA----------RDPSFYLRFRREAQNAAALNHPAIVAV   77 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT----------TSHHHHHHHHHHHTTCCCCCCTTBCCE
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc----------CCHHHHHHHHHHHHHHHcCCCCCcceE
Confidence            4445779999999999999999999999999999999965322          122345678899999999999999999


Q ss_pred             eeeeecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           92 RGVLSTDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        92 ~~~~~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ++++....    ..|+|||||+|++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~  155 (311)
T 3ork_A           78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV  155 (311)
T ss_dssp             EEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCE
T ss_pred             EEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCE
Confidence            99987654    3499999999999999987653  49999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++..+.....                                                     ........+||
T Consensus       156 kl~Dfg~a~~~~~~~~-----------------------------------------------------~~~~~~~~~gt  182 (311)
T 3ork_A          156 KVMDFGIARAIADSGN-----------------------------------------------------SVTQTAAVIGT  182 (311)
T ss_dssp             EECCCSCC-----------------------------------------------------------------------C
T ss_pred             EEeeccCccccccccc-----------------------------------------------------ccccccccCcC
Confidence            9999999976542110                                                     01123345799


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP  322 (426)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.......     .+.+..+.+||.+||+.||
T Consensus       183 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  262 (311)
T 3ork_A          183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP  262 (311)
T ss_dssp             CTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSG
T ss_pred             cccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCH
Confidence            99999999999999999999999999999999999999998887766665443322     3468889999999999999


Q ss_pred             CCCCChHHHhcCCCcC
Q 014344          323 TKRIGVEEIKGHEFFK  338 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~  338 (426)
                      .+||++.+++.|+|++
T Consensus       263 ~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          263 ENRYQTAAEMRADLVR  278 (311)
T ss_dssp             GGSCSSHHHHHHHHHH
T ss_pred             hhChhhHHHHHHHHHH
Confidence            9999999999999875

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=7.4e-50  Score=381.26  Aligned_cols=263  Identities=26%  Similarity=0.431  Sum_probs=220.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||.||+|.+..+++.||+|++.+......         ......+.+|+.+++.++||||++++++
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~h~~i~~~~~~   74 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRI---------PNGEANVKKEIQLLRRLRHKNVIQLVDV   74 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHS---------TTHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccccc---------chhHHHHHHHHHHHHhcCCCCeeEEEEE
Confidence            4679999999999999999999999999999999976544321         1235678899999999999999999999


Q ss_pred             e--ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           95 L--STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        95 ~--~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +  ......|+|||||.++ |.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        75 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~df  153 (305)
T 2wtk_C           75 LYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISAL  153 (305)
T ss_dssp             EECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecc
Confidence            8  4556899999999866 777777665667999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++........                                                      ........||+.|+|
T Consensus       154 g~~~~~~~~~~------------------------------------------------------~~~~~~~~~~~~y~a  179 (305)
T 2wtk_C          154 GVAEALHPFAA------------------------------------------------------DDTCRTSQGSPAFQP  179 (305)
T ss_dssp             TTCEECCTTCS------------------------------------------------------SCEECCCCSCGGGCC
T ss_pred             ccccccCcccc------------------------------------------------------ccccccCCCCCCCcC
Confidence            99976542110                                                      112234469999999


Q ss_pred             chhhcCCCC--ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          253 PEIIEGKGH--DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-LVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       253 PE~~~~~~~--~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||++.+...  +.++|||||||++|+|++|+.||.+.+..+.+..+...... ....+..+.+||.+||..||.+|||++
T Consensus       180 PE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  259 (305)
T 2wtk_C          180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIR  259 (305)
T ss_dssp             HHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             hhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHH
Confidence            999987543  78999999999999999999999998888777776654333 335688999999999999999999999


Q ss_pred             HHhcCCCcCCCC
Q 014344          330 EIKGHEFFKGVN  341 (426)
Q Consensus       330 eil~hp~f~~~~  341 (426)
                      ++++||||+...
T Consensus       260 ~ll~~~~~~~~~  271 (305)
T 2wtk_C          260 QIRQHSWFRKKH  271 (305)
T ss_dssp             HHHHSHHHHSCC
T ss_pred             HHhcCcccccCC
Confidence            999999998654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=9.7e-50  Score=391.73  Aligned_cols=254  Identities=27%  Similarity=0.431  Sum_probs=212.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++....           ........+.+|+.+++.++||||+++++++
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~  110 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-----------QSEIFAKRAYRELLLLKHMQHENVIGLLDVF  110 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-----------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-----------cchhHHHHHHHHHHHHHhcCCCCchhhhhhe
Confidence            57999999999999999999999999999999985432           1223456788999999999999999999999


Q ss_pred             ecCCeE------EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           96 STDKFV------GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        96 ~~~~~~------~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ......      |+||||+. ++|.+++.    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus       111 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL  185 (371)
T 4exu_A          111 TPASSLRNFYDFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKI  185 (371)
T ss_dssp             CSCSSSTTCCCCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             eccCCcccceeEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEE
Confidence            877665      99999997 67776642    34999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.....                                                           .....+||+.
T Consensus       186 ~Dfg~a~~~~~-----------------------------------------------------------~~~~~~~t~~  206 (371)
T 4exu_A          186 LDFGLARHADA-----------------------------------------------------------EMTGYVVTRW  206 (371)
T ss_dssp             CSTTCC-------------------------------------------------------------------CTTCCCT
T ss_pred             EecCccccccc-----------------------------------------------------------CcCCcccCcc
Confidence            99999875421                                                           1223468999


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C-----------------------C-
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P-----------------------P-  301 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~-----------------------~-  301 (426)
                      |+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..++..   +                       + 
T Consensus       207 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (371)
T 4exu_A          207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR  286 (371)
T ss_dssp             TSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCC
T ss_pred             ccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcc
Confidence            999999987 77899999999999999999999999998877766655320   0                       0 


Q ss_pred             -----CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          302 -----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       302 -----~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                           .....++.+.+||.+||+.||.+|||++|+|+||||+......
T Consensus       287 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  334 (371)
T 4exu_A          287 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPE  334 (371)
T ss_dssp             CCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred             hhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCcc
Confidence                 0124578899999999999999999999999999998765443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=8.7e-50  Score=391.00  Aligned_cols=256  Identities=27%  Similarity=0.404  Sum_probs=214.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++....            .......+.+|+.+|+.++||||+++++++
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   94 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE------------HQTYCQRTLREIKILLRFRHENIIGINDII   94 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT------------CHHHHHHHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc------------CcHHHHHHHHHHHHHHhcCCCCCccceeEE
Confidence            57999999999999999999999999999999985321            223456788999999999999999999999


Q ss_pred             ecC-----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           96 STD-----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        96 ~~~-----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ...     ..+|+||||+. ++|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        95 ~~~~~~~~~~~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~  170 (364)
T 3qyz_A           95 RAPTIEQMKDVYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC  170 (364)
T ss_dssp             CCSSTTTCCCEEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred             ecCCccccceEEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEE
Confidence            654     47999999997 689888765   349999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++........                                                     ........+||+.|
T Consensus       171 Dfg~a~~~~~~~~-----------------------------------------------------~~~~~~~~~gt~~y  197 (364)
T 3qyz_A          171 DFGLARVADPDHD-----------------------------------------------------HTGFLTEYVATRWY  197 (364)
T ss_dssp             CCTTCEECCGGGC-----------------------------------------------------BCCTTCCCCSCGGG
T ss_pred             eCcceEecCCCCC-----------------------------------------------------ccccccccccccCC
Confidence            9999976532110                                                     01122345799999


Q ss_pred             ccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC-------------------------
Q 014344          251 VAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP-------------------------  301 (426)
Q Consensus       251 ~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~-------------------------  301 (426)
                      +|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+..   .+.                         
T Consensus       198 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (364)
T 3qyz_A          198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV  277 (364)
T ss_dssp             CCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCC
T ss_pred             CCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCC
Confidence            99998754 5589999999999999999999999998876665554431   110                         


Q ss_pred             ----CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 ----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 ----~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                          .....+..+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       278 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             CHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             CHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence                013457889999999999999999999999999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=4.1e-50  Score=382.48  Aligned_cols=262  Identities=27%  Similarity=0.446  Sum_probs=219.6

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ..++|++++.||+|+||.||+|++..+++.||+|++....             ......+..|+.+++.++||||+++++
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~i~~~~~   83 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-------------EEELEDYIVEIEILATCDHPYIVKLLG   83 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----------------CCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-------------HHHHHHHHHHHHHHhcCCCCCEeeeee
Confidence            3457999999999999999999999999999999985431             123567888999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++..++.+|+|||||+|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        84 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  162 (302)
T 2j7t_A           84 AYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFG  162 (302)
T ss_dssp             EEECC-CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCH
T ss_pred             eeeeCCeEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECC
Confidence            9999999999999999999999876543 459999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      ++......                                                        ........||+.|+||
T Consensus       163 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~~y~aP  186 (302)
T 2j7t_A          163 VSAKNLKT--------------------------------------------------------LQKRDSFIGTPYWMAP  186 (302)
T ss_dssp             HHHHHHHH--------------------------------------------------------HHC-----CCGGGCCH
T ss_pred             CCcccccc--------------------------------------------------------ccccccccCChhhcCC
Confidence            87542100                                                        0011234689999999


Q ss_pred             hhh-----cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhccCCCC
Q 014344          254 EII-----EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       254 E~~-----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      |++     .+..++.++|||||||++|+|++|..||...+.......+......    ....+..+.+||.+||..||.+
T Consensus       187 E~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  266 (302)
T 2j7t_A          187 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPET  266 (302)
T ss_dssp             HHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTT
T ss_pred             eeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhh
Confidence            998     4677899999999999999999999999998887776666543322    2245778999999999999999


Q ss_pred             CCChHHHhcCCCcCCCChhhh
Q 014344          325 RIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       325 R~s~~eil~hp~f~~~~~~~~  345 (426)
                      |||+.++++||||+.+.|...
T Consensus       267 Rps~~~ll~h~~~~~~~~~~~  287 (302)
T 2j7t_A          267 RPSAAQLLEHPFVSSITSNKA  287 (302)
T ss_dssp             SCCHHHHTTSTTTTTCCCCHH
T ss_pred             CCCHHHHhcChHHhhhccchh
Confidence            999999999999998877553

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.4e-50  Score=385.64  Aligned_cols=272  Identities=25%  Similarity=0.386  Sum_probs=200.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+..++|++++.||+|+||+||+|++..+++.||||++.....            ......+.+|+.+++.++||||+
T Consensus         9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~   76 (303)
T 2vwi_A            9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC------------QTSMDELLKEIQAMSQCHHPNIV   76 (303)
T ss_dssp             ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------------------CCCCCCCTTBC
T ss_pred             ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc------------chhHHHHHHHHHHHhhcCCCCEe
Confidence            466788999999999999999999999999999999999854321            12245677899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHh------ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ------SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~------~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      ++++++..++..|+||||++|++|.+++...      ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        77 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~  156 (303)
T 2vwi_A           77 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE  156 (303)
T ss_dssp             CEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT
T ss_pred             eEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcC
Confidence            9999999999999999999999999987642      2345999999999999999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++.+||+|||++.........                                                   ........
T Consensus       157 ~~~~kl~dfg~~~~~~~~~~~---------------------------------------------------~~~~~~~~  185 (303)
T 2vwi_A          157 DGSVQIADFGVSAFLATGGDI---------------------------------------------------TRNKVRKT  185 (303)
T ss_dssp             TCCEEECCCHHHHHCC----------------------------------------------------------------
T ss_pred             CCCEEEEeccchheeccCCCc---------------------------------------------------cchhhhcc
Confidence            999999999998765422100                                                   00112234


Q ss_pred             cccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----------CCCCCCHHHH
Q 014344          244 FVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----------DLVGEPTPLR  311 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----------~~~~~~~~~~  311 (426)
                      .+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.................           .....+..+.
T Consensus       186 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (303)
T 2vwi_A          186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFR  265 (303)
T ss_dssp             --CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHH
T ss_pred             cCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHH
Confidence            569999999999876 5689999999999999999999999998776655544432221           1234577899


Q ss_pred             HHHHHHhccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          312 NLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       312 ~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                      +||.+||..||.+|||+.++++||||+...+..
T Consensus       266 ~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~  298 (303)
T 2vwi_A          266 KMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE  298 (303)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHTSTTC-------
T ss_pred             HHHHHHccCChhhCcCHHHHhhChhhhcCCCCc
Confidence            999999999999999999999999998765543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=7.7e-50  Score=377.13  Aligned_cols=252  Identities=17%  Similarity=0.227  Sum_probs=208.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~   94 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++.....           .......+.+|+.++..+ +||||++++++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~   79 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-----------GSVDEQNALREVYAHAVLGQHSHVVRYFSA   79 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-----------TSHHHHHHHHHHHHHHHSCSCTTBCCEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-----------ccHHHHHHHHHHHHHHHhCCCCCeeeeeee
Confidence            579999999999999999999999999999999854321           122345778899999999 89999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC--------
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN--------  164 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~--------  164 (426)
                      +.+++.+|+|||||+|++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.+        
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~  159 (289)
T 1x8b_A           80 WAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASE  159 (289)
T ss_dssp             EEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------
T ss_pred             eecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccc
Confidence            999999999999999999999987543  2569999999999999999999999999999999999999844        


Q ss_pred             -----------CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 014344          165 -----------GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRS  233 (426)
Q Consensus       165 -----------g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (426)
                                 ..+||+|||++......                                                    
T Consensus       160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------------  187 (289)
T 1x8b_A          160 EGDEDDWASNKVMFKIGDLGHVTRISSP----------------------------------------------------  187 (289)
T ss_dssp             ----------CCCEEECCCTTCEETTCS----------------------------------------------------
T ss_pred             ccccccccCCceEEEEcccccccccCCc----------------------------------------------------
Confidence                       47999999998765321                                                    


Q ss_pred             CCCCCCCccccccCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHH
Q 014344          234 DSDSSEKSNSFVGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRN  312 (426)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  312 (426)
                              ....||+.|+|||++.+. .++.++|||||||++|+|++|.+|+........... ...+......+..+.+
T Consensus       188 --------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  258 (289)
T 1x8b_A          188 --------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ-GRLPRIPQVLSQEFTE  258 (289)
T ss_dssp             --------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHT-TCCCCCSSCCCHHHHH
T ss_pred             --------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHc-CCCCCCCcccCHHHHH
Confidence                    122489999999999876 567899999999999999999988765543222211 1122233456889999


Q ss_pred             HHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          313 LIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       313 li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ||.+||..||++|||+.++++||||++
T Consensus       259 li~~~l~~dp~~Rps~~~ll~h~~~~~  285 (289)
T 1x8b_A          259 LLKVMIHPDPERRPSAMALVKHSVLLS  285 (289)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred             HHHHHhCCCcccCCCHHHHhhChHhhh
Confidence            999999999999999999999999975

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=7.7e-50  Score=388.25  Aligned_cols=258  Identities=27%  Similarity=0.424  Sum_probs=208.9

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC--CCcc
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH--PLLP   89 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~iv   89 (426)
                      ++...+|++++.||+|+||+||+|.+ .+++.||||++.....           .......+.+|+.+|+.+.|  |||+
T Consensus         5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~~~~~~iv   72 (343)
T 3dbq_A            5 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-----------DNQTLDSYRNEIAYLNKLQQHSDKII   72 (343)
T ss_dssp             ESSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTC-----------CHHHHHHHHHHHHHHHHHTTTCTTBC
T ss_pred             eeecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeecccc-----------chHHHHHHHHHHHHHHhhhhcCCceE
Confidence            45667899999999999999999998 4688999999854321           22345678899999999986  9999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.++..+|+||| +.+++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||
T Consensus        73 ~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl  148 (343)
T 3dbq_A           73 RLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKL  148 (343)
T ss_dssp             CEEEEEECSSEEEEEEC-CCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEE
T ss_pred             EEeeeEeeCCEEEEEEe-CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEE
Confidence            99999999999999999 5579999998764  4599999999999999999999999999999999999996 689999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+.....                                                      .......+||+.
T Consensus       149 ~DFG~a~~~~~~~~------------------------------------------------------~~~~~~~~gt~~  174 (343)
T 3dbq_A          149 IDFGIANQMQPDTT------------------------------------------------------SVVKDSQVGTVN  174 (343)
T ss_dssp             CCCSSSCCC------------------------------------------------------------------CCCCS
T ss_pred             eecccccccCcccc------------------------------------------------------cccCCCCcCCcC
Confidence            99999986642210                                                      012234579999


Q ss_pred             CccchhhcC-----------CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCC---CCCCCCCHHHHHHH
Q 014344          250 YVAPEIIEG-----------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILCRP---PDLVGEPTPLRNLI  314 (426)
Q Consensus       250 y~aPE~~~~-----------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~---~~~~~~~~~~~~li  314 (426)
                      |+|||++.+           ..++.++|||||||++|+|++|+.||...... ..+..+....   ......+..+.+||
T Consensus       175 y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  254 (343)
T 3dbq_A          175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL  254 (343)
T ss_dssp             SCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHH
T ss_pred             cCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHH
Confidence            999999875           67899999999999999999999999875433 3444443221   12223467899999


Q ss_pred             HHHhccCCCCCCChHHHhcCCCcCC
Q 014344          315 RRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      .+||+.||.+|||+.|+|+||||+.
T Consensus       255 ~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          255 KCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HHHcCCChhHCCCHHHHHhCccccc
Confidence            9999999999999999999999964

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=8.8e-50  Score=377.83  Aligned_cols=258  Identities=26%  Similarity=0.402  Sum_probs=202.5

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+..++|++++.||+|+||+||+|++..+++.||+|++.......           ...+.+..+...++.++||||+++
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~~~~~~~~~h~~iv~~   71 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-----------EQKRLLMDLDISMRTVDCPFTVTF   71 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHH-----------HHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcH-----------HHHHHHHHHHHHHHhCCCCeEEEE
Confidence            467788999999999999999999999999999999985432111           123344445556888899999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeeccCCcEE
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~--~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++.+++..|+||||++ |+|.+++..  .....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+|
T Consensus        72 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~k  150 (290)
T 3fme_A           72 YGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK  150 (290)
T ss_dssp             EEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEE
T ss_pred             eeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEE
Confidence            999999999999999997 588776653  2345699999999999999999999998 999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++.......                                                         ......||+
T Consensus       151 l~Dfg~~~~~~~~~---------------------------------------------------------~~~~~~~t~  173 (290)
T 3fme_A          151 MCDFGISGYLVDDV---------------------------------------------------------AKDIDAGCK  173 (290)
T ss_dssp             BCCC------------------------------------------------------------------------CCCC
T ss_pred             EeecCCcccccccc---------------------------------------------------------cccccCCCc
Confidence            99999987653211                                                         112235899


Q ss_pred             CCccchhh----cCCCCChhhHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCC-CC--CCCCCHHHHHHHHHHhcc
Q 014344          249 EYVAPEII----EGKGHDFAVDWWSLGVVLHEMLYGATPFRG-SSRKETFYRILCRP-PD--LVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       249 ~y~aPE~~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~-~~~~~~~~~i~~~~-~~--~~~~~~~~~~li~~~L~~  320 (426)
                      .|+|||++    .+..++.++|||||||++|+|++|+.||.. .............. +.  ....+..+.+||.+||+.
T Consensus       174 ~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  253 (290)
T 3fme_A          174 PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKK  253 (290)
T ss_dssp             CCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCS
T ss_pred             cccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhc
Confidence            99999996    566789999999999999999999999986 34444444443222 22  234688999999999999


Q ss_pred             CCCCCCChHHHhcCCCcC
Q 014344          321 DPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       321 dP~~R~s~~eil~hp~f~  338 (426)
                      ||.+|||+.|+++||||+
T Consensus       254 ~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          254 NSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             SGGGSCCHHHHTTSHHHH
T ss_pred             ChhhCcCHHHHHhCcccc
Confidence            999999999999999996

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=4.2e-50  Score=397.42  Aligned_cols=256  Identities=30%  Similarity=0.490  Sum_probs=208.9

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ...+|++++.||+|+||+||+|++..+++ +|+|++....                 ....+|+.+|+.++||||+++++
T Consensus        38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~-----------------~~~~~E~~il~~l~h~niv~l~~   99 (394)
T 4e7w_A           38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK-----------------RFKNRELQIMRIVKHPNVVDLKA   99 (394)
T ss_dssp             EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT-----------------TSCCHHHHHHHTCCCTTBCCEEE
T ss_pred             ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc-----------------chHHHHHHHHHhCCCCCcceEEE
Confidence            34579999999999999999999987766 8888774321                 01125999999999999999999


Q ss_pred             eeecC------CeEEEEEeccCCCChHHHHH-HhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec-cCC
Q 014344           94 VLSTD------KFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ-ENG  165 (426)
Q Consensus        94 ~~~~~------~~~~lV~Ey~~gg~L~~l~~-~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~-~~g  165 (426)
                      +|...      .++|+|||||.++.+..+.. ......+++..++.++.||+.||+|||++||+||||||+|||++ .++
T Consensus       100 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~  179 (394)
T 4e7w_A          100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG  179 (394)
T ss_dssp             EEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT
T ss_pred             EEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCC
Confidence            99543      34899999998655444432 22345699999999999999999999999999999999999999 799


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||+++.+....                                                         .....+
T Consensus       180 ~~kL~DFG~a~~~~~~~---------------------------------------------------------~~~~~~  202 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAGE---------------------------------------------------------PNVSYI  202 (394)
T ss_dssp             EEEECCCTTCEECCTTC---------------------------------------------------------CCCSSC
T ss_pred             cEEEeeCCCcccccCCC---------------------------------------------------------CCcccc
Confidence            99999999998653211                                                         123456


Q ss_pred             cCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C-----------------C---
Q 014344          246 GTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P-----------------P---  301 (426)
Q Consensus       246 gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~-----------------~---  301 (426)
                      ||+.|+|||++.+. .|+.++|||||||++|+|++|++||.+.+..+.+..+...   +                 +   
T Consensus       203 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  282 (394)
T 4e7w_A          203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIR  282 (394)
T ss_dssp             SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCC
T ss_pred             cCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhcccccc
Confidence            89999999999775 5899999999999999999999999999887776655421   0                 0   


Q ss_pred             -------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          302 -------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       302 -------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                             .....++.+.+||.+||++||.+|||+.|+++||||+++.|..
T Consensus       283 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          283 PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE  332 (394)
T ss_dssp             CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred             CCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence                   0113578899999999999999999999999999999887654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2e-49  Score=380.06  Aligned_cols=262  Identities=23%  Similarity=0.423  Sum_probs=219.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++...               .....+.+|+.+++.++||||++++
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---------------~~~~~~~~e~~~l~~l~h~~i~~~~   90 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---------------SDLQEIIKEISIMQQCDSPHVVKYY   90 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT---------------SCCHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch---------------HHHHHHHHHHHHHHhCCCCCCccEE
Confidence            4456799999999999999999999999999999998542               1235678899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++.....+|+||||+.+++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        91 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~df  169 (314)
T 3com_A           91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADF  169 (314)
T ss_dssp             EEEEETTEEEEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEeCCEEEEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeec
Confidence            99999999999999999999999986443 45999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                        .......||+.|+|
T Consensus       170 g~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~a  193 (314)
T 3com_A          170 GVAGQLTDTM--------------------------------------------------------AKRNTVIGTPFWMA  193 (314)
T ss_dssp             TTCEECBTTB--------------------------------------------------------SCBCCCCSCGGGCC
T ss_pred             ccchhhhhhc--------------------------------------------------------cccCccCCCCCccC
Confidence            9987653210                                                        11234468999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      ||++.+..++.++|||||||++|+|++|..||...+.......+......    ....+..+.+||.+||..||.+|||+
T Consensus       194 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~  273 (314)
T 3com_A          194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA  273 (314)
T ss_dssp             HHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCH
T ss_pred             hhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCH
Confidence            99999999999999999999999999999999988877665555433322    12347889999999999999999999


Q ss_pred             HHHhcCCCcCCCChhhhh
Q 014344          329 EEIKGHEFFKGVNWELLL  346 (426)
Q Consensus       329 ~eil~hp~f~~~~~~~~~  346 (426)
                      .++++||||++..+....
T Consensus       274 ~~ll~~~~~~~~~~~~~~  291 (314)
T 3com_A          274 TQLLQHPFVRSAKGVSIL  291 (314)
T ss_dssp             HHHTTSHHHHTCCCGGGG
T ss_pred             HHHHhCHHHhcCCcchHH
Confidence            999999999987665544

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.6e-50  Score=401.16  Aligned_cols=254  Identities=29%  Similarity=0.483  Sum_probs=208.5

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      ..+|++++.||+|+||+||+|++..+++.||||++....                 ....+|+.+|+.++||||++++++
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----------------~~~~~E~~il~~l~hpniv~l~~~  115 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----------------RFKNRELQIMRKLDHCNIVRLRYF  115 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----------------TSCCHHHHHHHTCCCTTBCCEEEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----------------hhHHHHHHHHHHcCCCCccceeeE
Confidence            347999999999999999999999999999999984321                 112359999999999999999999


Q ss_pred             eec------CCeEEEEEeccCCCChHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC-C
Q 014344           95 LST------DKFVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN-G  165 (426)
Q Consensus        95 ~~~------~~~~~lV~Ey~~gg~L~~l~~~--~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~-g  165 (426)
                      |..      ..++++||||+.+ +|..++..  .....+++..++.++.||+.||.|||++||+||||||+|||++.+ +
T Consensus       116 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~  194 (420)
T 1j1b_A          116 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTA  194 (420)
T ss_dssp             EEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTT
T ss_pred             EeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCC
Confidence            843      2357899999975 66665443  234569999999999999999999999999999999999999965 5


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||+++.+....                                                         .....+
T Consensus       195 ~~kl~DFG~a~~~~~~~---------------------------------------------------------~~~~~~  217 (420)
T 1j1b_A          195 VLKLCDFGSAKQLVRGE---------------------------------------------------------PNVSYI  217 (420)
T ss_dssp             EEEECCCTTCEECCTTC---------------------------------------------------------CCCSCC
T ss_pred             eEEeccchhhhhcccCC---------------------------------------------------------Cceeee
Confidence            78999999998653211                                                         123457


Q ss_pred             cCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C-----------------CC--
Q 014344          246 GTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P-----------------PD--  302 (426)
Q Consensus       246 gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~-----------------~~--  302 (426)
                      ||+.|+|||++.+. .|+.++|||||||++|||++|++||.+.+..+.+.+++..   +                 +.  
T Consensus       218 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~  297 (420)
T 1j1b_A          218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK  297 (420)
T ss_dssp             SCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCC
T ss_pred             eCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccC
Confidence            99999999999775 7899999999999999999999999999887776655421   0                 00  


Q ss_pred             --------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          303 --------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       303 --------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                              ....+..+.+||.+||++||.+|||+.|+++||||+++.+.
T Consensus       298 ~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          298 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP  346 (420)
T ss_dssp             CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccccc
Confidence                    12346789999999999999999999999999999875443

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-49  Score=383.60  Aligned_cols=261  Identities=25%  Similarity=0.429  Sum_probs=217.2

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      ..++|++++.||+|+||.||+|++..+++.||||++....              .....+.+|+.+++.+ .||||++++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~e~~~l~~l~~h~~i~~~~   87 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--------------DEEEEIKQEINMLKKYSHHRNIATYY   87 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--------------STTHHHHHHHHHHHHHCCSTTBCCEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--------------ccHHHHHHHHHHHHhccCCCCeeeee
Confidence            4568999999999999999999999999999999984321              1235678899999999 799999999


Q ss_pred             eeeec------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           93 GVLST------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        93 ~~~~~------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      +++..      ...+|+|||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus        88 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             EEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCC
T ss_pred             eEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCC
Confidence            99976      568999999999999999988765567999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++.......                                                        ......+|
T Consensus       168 ~kl~Dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~  191 (326)
T 2x7f_A          168 VKLVDFGVSAQLDRTV--------------------------------------------------------GRRNTFIG  191 (326)
T ss_dssp             EEECCCTTTC---------------------------------------------------------------------C
T ss_pred             EEEeeCcCceecCcCc--------------------------------------------------------cccccccC
Confidence            9999999987653210                                                        11234469


Q ss_pred             CCCCccchhhc-----CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHh
Q 014344          247 TEEYVAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRRLL  318 (426)
Q Consensus       247 t~~y~aPE~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~~L  318 (426)
                      |+.|+|||++.     +..++.++|||||||++|+|++|..||.+.+.......+...+.   .....+..+.+||.+||
T Consensus       192 ~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  271 (326)
T 2x7f_A          192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCL  271 (326)
T ss_dssp             CGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHC
T ss_pred             CccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHh
Confidence            99999999997     56688999999999999999999999998887776666544322   22356789999999999


Q ss_pred             ccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          319 EKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       319 ~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                      ..||.+|||++++++||||++..+..
T Consensus       272 ~~dp~~Rps~~~ll~hp~~~~~~~~~  297 (326)
T 2x7f_A          272 VKNHSQRPATEQLMKHPFIRDQPNER  297 (326)
T ss_dssp             CSSGGGSCCHHHHHTSHHHHCCTTHH
T ss_pred             ccChhhCCCHHHHhhChHHhhCcccc
Confidence            99999999999999999998766544

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=4e-50  Score=390.42  Aligned_cols=277  Identities=24%  Similarity=0.372  Sum_probs=229.7

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhc----ccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL----TNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~----~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      ..+..++|++++.||+|+||.||+|.+  +++.||||++............    ...........+.+|+.+++.++||
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~  103 (348)
T 2pml_X           26 KDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNE  103 (348)
T ss_dssp             SCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCT
T ss_pred             cccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCC
Confidence            345568999999999999999999998  8999999999765543221000    0001112237888999999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHH------HHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCe
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSL------RKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENI  159 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l------~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~Ni  159 (426)
                      ||+++++++.+.+.+|+|||||+|++|.++      +.......+++..++.++.||+.||.|||+ +||+||||||+||
T Consensus       104 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          104 YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI  183 (348)
T ss_dssp             TBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGE
T ss_pred             CcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhE
Confidence            999999999999999999999999999987      554335679999999999999999999999 9999999999999


Q ss_pred             eeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          160 MIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE  239 (426)
Q Consensus       160 Ll~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (426)
                      |++.++.+||+|||++......                                                          
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~~----------------------------------------------------------  205 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVDK----------------------------------------------------------  205 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBTT----------------------------------------------------------
T ss_pred             EEcCCCcEEEeccccccccccc----------------------------------------------------------
Confidence            9999999999999998765311                                                          


Q ss_pred             CccccccCCCCccchhhcCC-CCCh-hhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCCCCC-------------
Q 014344          240 KSNSFVGTEEYVAPEIIEGK-GHDF-AVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCRPPDL-------------  303 (426)
Q Consensus       240 ~~~~~~gt~~y~aPE~~~~~-~~~~-~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~-------------  303 (426)
                      ......||+.|+|||++.+. .++. ++|||||||++|+|++|+.||...+. .+....+.......             
T Consensus       206 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  285 (348)
T 2pml_X          206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTN  285 (348)
T ss_dssp             EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC
T ss_pred             cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccc
Confidence            12234689999999999887 6666 99999999999999999999998776 66666665443222             


Q ss_pred             -------CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhhhhh
Q 014344          304 -------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       304 -------~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~~~~  347 (426)
                             ...+..+.+||.+||+.||.+|||+.|+++||||++.+|..+.+
T Consensus       286 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~~~~  336 (348)
T 2pml_X          286 KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLRE  336 (348)
T ss_dssp             --------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHHHHH
T ss_pred             cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHHHHH
Confidence                   34578899999999999999999999999999999999987643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1e-49  Score=374.69  Aligned_cols=257  Identities=25%  Similarity=0.406  Sum_probs=215.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||+|++.....            ......+.+|+.+++.++||||+++++++
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   74 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA------------VDCPENIKKEICINKMLNHENVVKFYGHR   74 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC------------TTHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc------------hhhhHHHHHHHHHHHhcCCCCceeeeeEE
Confidence            579999999999999999999999999999999854321            12346788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+.+..|+||||++|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        75 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  152 (276)
T 2yex_A           75 REGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA  152 (276)
T ss_dssp             EETTEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EcCCEEEEEEEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCc
Confidence            9999999999999999999887543  34999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      ..+....                                                      ........+||+.|+|||+
T Consensus       153 ~~~~~~~------------------------------------------------------~~~~~~~~~~~~~y~aPE~  178 (276)
T 2yex_A          153 TVFRYNN------------------------------------------------------RERLLNKMCGTLPYVAPEL  178 (276)
T ss_dssp             EECEETT------------------------------------------------------EECCBCCCCSCGGGCCGGG
T ss_pred             cccCCCc------------------------------------------------------chhcccCCccccCccChHH
Confidence            7653111                                                      0011234569999999999


Q ss_pred             hcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCC---CCCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          256 IEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       256 ~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      +.+..+ +.++|||||||++|+|++|+.||...... ..+..+....   ......+..+.+||.+||..||.+|||+++
T Consensus       179 ~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  258 (276)
T 2yex_A          179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPD  258 (276)
T ss_dssp             GTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHH
Confidence            988775 78999999999999999999999876543 2233332222   122345788999999999999999999999


Q ss_pred             HhcCCCcCCC
Q 014344          331 IKGHEFFKGV  340 (426)
Q Consensus       331 il~hp~f~~~  340 (426)
                      +++||||+..
T Consensus       259 il~~~~~~~~  268 (276)
T 2yex_A          259 IKKDRWYNKP  268 (276)
T ss_dssp             HTTCTTTTCC
T ss_pred             HhcCccccCh
Confidence            9999999753

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=9.8e-50  Score=393.22  Aligned_cols=254  Identities=28%  Similarity=0.424  Sum_probs=211.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CC-----Cc
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HP-----LL   88 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp-----~i   88 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++....              .....+..|+.+++.+. |+     +|
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~e~~~l~~l~~~~~~~~~~i  118 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--------------AFLNQAQIEVRLLELMNKHDTEMKYYI  118 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--------------HHHHHHHHHHHHHHHHHHCSSGGGGGB
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--------------HHHHHHHHHHHHHHHHHhcccccceeE
Confidence            578999999999999999999999999999999985321              23456677888888885 45     49


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH--HCCCcccCCCCCCeeec--cC
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH--NMGIVYRDLKPENIMIQ--EN  164 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH--~~giiHrDlKp~NiLl~--~~  164 (426)
                      +.+++++...+.+|+||||+. ++|.+++.......+++..++.++.||+.||.|||  +.||+||||||+|||++  .+
T Consensus       119 v~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~  197 (382)
T 2vx3_A          119 VHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR  197 (382)
T ss_dssp             CCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTS
T ss_pred             EEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCC
Confidence            999999999999999999996 59999988766566999999999999999999999  57999999999999995  47


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||++.....                                                           .....
T Consensus       198 ~~~kL~DFG~a~~~~~-----------------------------------------------------------~~~~~  218 (382)
T 2vx3_A          198 SAIKIVDFGSSCQLGQ-----------------------------------------------------------RIYQY  218 (382)
T ss_dssp             CCEEECCCTTCEETTC-----------------------------------------------------------CCCSS
T ss_pred             CcEEEEeccCceeccc-----------------------------------------------------------ccccc
Confidence            8899999999976531                                                           12234


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCC-------------------
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPD-------------------  302 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~~-------------------  302 (426)
                      +||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+...   ++.                   
T Consensus       219 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (382)
T 2vx3_A          219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDG  298 (382)
T ss_dssp             CSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTS
T ss_pred             cCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccc
Confidence            6999999999999999999999999999999999999999999887776655421   000                   


Q ss_pred             ---------------CC---------------------C-------CCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 ---------------LV---------------------G-------EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 ---------------~~---------------------~-------~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                     ..                     +       ....+.+||.+||++||++|||++|+|+||||++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~  378 (382)
T 2vx3_A          299 TWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK  378 (382)
T ss_dssp             CEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC
T ss_pred             ccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCccccc
Confidence                           00                     0       0036889999999999999999999999999987


Q ss_pred             CCh
Q 014344          340 VNW  342 (426)
Q Consensus       340 ~~~  342 (426)
                      ..+
T Consensus       379 ~~~  381 (382)
T 2vx3_A          379 TAD  381 (382)
T ss_dssp             ---
T ss_pred             CCC
Confidence            543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=9.7e-50  Score=385.32  Aligned_cols=254  Identities=28%  Similarity=0.357  Sum_probs=212.5

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEE-cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC-----
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKD-VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP-----   86 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~-~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp-----   86 (426)
                      +-.++|++++.||+|+||+||+|.+ ..+++.||||++....              .....+.+|+.+++.+.|+     
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~~~~~~~~   76 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--------------RYCEAARSEIQVLEHLNTTDPNST   76 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--------------HHHHHHHHHHHHHHHHHHHCTTCT
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--------------chhHHHHHHHHHHHHhhhcCCCCc
Confidence            3446799999999999999999998 5688999999984321              2345677899999988765     


Q ss_pred             -CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc--
Q 014344           87 -LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE--  163 (426)
Q Consensus        87 -~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~--  163 (426)
                       +++++++++...+.+|+||||| +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.  
T Consensus        77 ~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~  155 (339)
T 1z57_A           77 FRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSD  155 (339)
T ss_dssp             TCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCC
T ss_pred             eeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccc
Confidence             4999999999999999999999 899999988776567999999999999999999999999999999999999987  


Q ss_pred             -----------------CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCC
Q 014344          164 -----------------NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIG  226 (426)
Q Consensus       164 -----------------~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (426)
                                       ++.+||+|||++.....                                              
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~----------------------------------------------  189 (339)
T 1z57_A          156 YTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE----------------------------------------------  189 (339)
T ss_dssp             EEEEEC----CEEEEESCCCEEECCCSSCEETTS----------------------------------------------
T ss_pred             cccccCCccccccccccCCCceEeeCcccccCcc----------------------------------------------
Confidence                             66899999999875421                                              


Q ss_pred             CCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCCCC-
Q 014344          227 PDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD-  302 (426)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~~-  302 (426)
                                   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.   ...+. 
T Consensus       190 -------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~  256 (339)
T 1z57_A          190 -------------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH  256 (339)
T ss_dssp             -------------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHH
T ss_pred             -------------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence                         1123469999999999999999999999999999999999999999888766543331   11110 


Q ss_pred             -----------------------------------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          303 -----------------------------------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       303 -----------------------------------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                                                               ....+..+.+||.+||..||.+|||+.|+++||||+.+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          257 MIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             HHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                                                     00113568899999999999999999999999999753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=4.7e-50  Score=396.34  Aligned_cols=251  Identities=21%  Similarity=0.312  Sum_probs=205.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--------CC
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--------HP   86 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--------hp   86 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++....              .....+.+|+.+|+.+.        ||
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~~~~~~~~~~~  101 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--------------HYTETALDEIRLLKSVRNSDPNDPNRE  101 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--------------HHHHHHHHHHHHHHHHHHSCTTCGGGG
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--------------cchHHHHHHHHHHHHHhhcCCCCCCcc
Confidence            467999999999999999999999999999999985321              23456788999999985        78


Q ss_pred             Ccceeeeeee----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeee
Q 014344           87 LLPRLRGVLS----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMI  161 (426)
Q Consensus        87 ~iv~l~~~~~----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl  161 (426)
                      ||++++++|.    ....+|+||||| +++|.+++.....+.+++..++.++.||+.||+|||++ ||+||||||+|||+
T Consensus       102 ~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll  180 (397)
T 1wak_A          102 MVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL  180 (397)
T ss_dssp             GBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEE
T ss_pred             eeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeE
Confidence            8999999997    567899999999 56666666655556699999999999999999999998 99999999999999


Q ss_pred             ccCC-------------------------------------------------cEEEecccccccCCCCCCCCCcchhhc
Q 014344          162 QENG-------------------------------------------------HIMLVDFDLSTKLSPKTPQASPKTVLA  192 (426)
Q Consensus       162 ~~~g-------------------------------------------------~ikL~DFgls~~~~~~~~~~~~~~~~~  192 (426)
                      +.++                                                 .+||+|||++.....            
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~------------  248 (397)
T 1wak_A          181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK------------  248 (397)
T ss_dssp             CCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB------------
T ss_pred             eccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc------------
Confidence            9775                                                 799999999876531            


Q ss_pred             cccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHH
Q 014344          193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGV  272 (426)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  272 (426)
                                                                     .....+||+.|+|||++.+..++.++|||||||
T Consensus       249 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  281 (397)
T 1wak_A          249 -----------------------------------------------HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC  281 (397)
T ss_dssp             -----------------------------------------------CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHH
T ss_pred             -----------------------------------------------cCccCCCCCcccCChhhcCCCCCcHHHHHHHHH
Confidence                                                           122346999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCC------HHHHHHHH---hcCCCC----------------------------------------C
Q 014344          273 VLHEMLYGATPFRGSS------RKETFYRI---LCRPPD----------------------------------------L  303 (426)
Q Consensus       273 il~ell~g~~pf~~~~------~~~~~~~i---~~~~~~----------------------------------------~  303 (426)
                      ++|+|++|+.||.+.+      .......+   +...+.                                        .
T Consensus       282 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (397)
T 1wak_A          282 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWS  361 (397)
T ss_dssp             HHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCC
T ss_pred             HHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccc
Confidence            9999999999998654      22222222   111100                                        0


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ...+..+.+||.+||+.||.+|||++|||+||||++
T Consensus       362 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          362 QEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             hhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            011345789999999999999999999999999963

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=1.1e-49  Score=387.55  Aligned_cols=258  Identities=28%  Similarity=0.361  Sum_probs=214.3

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCC-ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC-----
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESS-ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-----   87 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-----   87 (426)
                      -.++|++++.||+|+||+||+|.+..++ +.||+|++....              .....+..|+.+++.+.|++     
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~~~~~~~~~   82 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--------------KYREAARLEINVLKKIKEKDKENKF   82 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--------------HHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--------------cchhHHHHHHHHHHHHhhcCCCCce
Confidence            3467999999999999999999998777 689999985321              23456777999999987655     


Q ss_pred             -cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee-----
Q 014344           88 -LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI-----  161 (426)
Q Consensus        88 -iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl-----  161 (426)
                       ++.+++++...+.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||+     
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~  161 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF  161 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCE
T ss_pred             eEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccc
Confidence             899999999999999999999 5677777666555669999999999999999999999999999999999999     


Q ss_pred             --------------ccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          162 --------------QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       162 --------------~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                                    +.++.+||+|||++.....                                               
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----------------------------------------------  194 (355)
T 2eu9_A          162 ETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE-----------------------------------------------  194 (355)
T ss_dssp             EEEECCC-CCCEEEESCCCEEECCCTTCEETTS-----------------------------------------------
T ss_pred             cccccccccccccccCCCcEEEeecCccccccc-----------------------------------------------
Confidence                          5678999999999875321                                               


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCCCC--
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD--  302 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~~--  302 (426)
                                  .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.   ...+.  
T Consensus       195 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~  262 (355)
T 2eu9_A          195 ------------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHM  262 (355)
T ss_dssp             ------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             ------------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHH
Confidence                        1123469999999999999999999999999999999999999999888765543322   11110  


Q ss_pred             ----------------------------------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          303 ----------------------------------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       303 ----------------------------------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                                                              ....+..+.+||.+||+.||++|||+.|+|+||||++++|
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          263 IHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             HHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             hhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence                                                    0011246889999999999999999999999999999988


Q ss_pred             hhh
Q 014344          343 ELL  345 (426)
Q Consensus       343 ~~~  345 (426)
                      +..
T Consensus       343 ~~~  345 (355)
T 2eu9_A          343 EER  345 (355)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=2.3e-49  Score=381.45  Aligned_cols=260  Identities=29%  Similarity=0.391  Sum_probs=217.4

Q ss_pred             CCCcEEEeeecccCceEEEEEEEc-CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc---CCCCcce
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDV-ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV---EHPLLPR   90 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~   90 (426)
                      .++|++++.||+|+||+||+|++. .+++.||+|++......           ......+.+|+.+++.+   .||||++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~h~~i~~   78 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-----------EGMPLSTIREVAVLRHLETFEHPNVVR   78 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-----------TSCBCTHHHHHHHHHHHHHTCCTTBCC
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-----------ccCCchhhHHHHHHHhhhccCCCCeEe
Confidence            367999999999999999999995 67899999998543211           11123455677777766   8999999


Q ss_pred             eeeeee-----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           91 LRGVLS-----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        91 l~~~~~-----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      +++++.     ....+++||||+. |+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus        79 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~  157 (326)
T 1blx_A           79 LFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG  157 (326)
T ss_dssp             EEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             eeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCC
Confidence            999987     5678999999997 6999998876656699999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++......                                                         .......
T Consensus       158 ~~kl~Dfg~~~~~~~~---------------------------------------------------------~~~~~~~  180 (326)
T 1blx_A          158 QIKLADFGLARIYSFQ---------------------------------------------------------MALTSVV  180 (326)
T ss_dssp             CEEECSCCSCCCCCGG---------------------------------------------------------GGGCCCC
T ss_pred             CEEEecCcccccccCC---------------------------------------------------------CCccccc
Confidence            9999999998754311                                                         0122346


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C----------------------
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P----------------------  300 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~----------------------  300 (426)
                      ||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......++..   +                      
T Consensus       181 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (326)
T 1blx_A          181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ  260 (326)
T ss_dssp             CCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCC
T ss_pred             cccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcc
Confidence            899999999999999999999999999999999999999999887776665421   0                      


Q ss_pred             ---CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          301 ---PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       301 ---~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                         ......+..+.+||.+||..||.+|||+.++++||||+++++.
T Consensus       261 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             CGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             hhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence               0112457789999999999999999999999999999987654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.5e-51  Score=403.86  Aligned_cols=250  Identities=17%  Similarity=0.238  Sum_probs=202.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHH---HHHhcCCCCccee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR---VLRNVEHPLLPRL   91 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~---il~~l~hp~iv~l   91 (426)
                      .++|++++.||+|+||+||+|++..+|+.||||++.+...          ......+.+.+|+.   +|+.++||||+++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~~l~hpniv~~  141 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER----------PPSNAIKQMKEEVLRLRLLRGIKNQKQAKV  141 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-----------CCTTHHHHHHHHHHGGGGSTTCCSHHHHHH
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccc----------cchHHHHHHHHHHHHHHhccccCCHHHHHH
Confidence            4679999999999999999999999999999999964321          12234577888995   4555579999999


Q ss_pred             e-------eeeecCC-----------------eEEEEEeccCCCChHHHHHHhccCCCCH-------HHHHHHHHHHHHH
Q 014344           92 R-------GVLSTDK-----------------FVGYAIDYCPGRDLHSLRKQQSEQMFSD-------DTIRFYAAELVLA  140 (426)
Q Consensus        92 ~-------~~~~~~~-----------------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~-------~~~~~~~~qil~a  140 (426)
                      +       +++.+.+                 ..|+||||| +|+|.+++.....  +++       ..+..++.||+.|
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~--~~~~~~~l~~~~~~~i~~qi~~a  218 (377)
T 3byv_A          142 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLS--HSSTHKSLVHHARLQLTLQVIRL  218 (377)
T ss_dssp             HHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHH--TTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccc--cccccccccHHHHHHHHHHHHHH
Confidence            8       6666554                 389999999 6899999876532  444       7888899999999


Q ss_pred             HHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCC
Q 014344          141 LEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPV  220 (426)
Q Consensus       141 L~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (426)
                      |+|||++||+||||||+|||++.+|.+||+|||+++....                                        
T Consensus       219 L~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----------------------------------------  258 (377)
T 3byv_A          219 LASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----------------------------------------  258 (377)
T ss_dssp             HHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC----------------------------------------
T ss_pred             HHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCC----------------------------------------
Confidence            9999999999999999999999999999999999875321                                        


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCC-----------CCChhhHHHHHHHHHHHHHhCCCCCCCCCH
Q 014344          221 HSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK-----------GHDFAVDWWSLGVVLHEMLYGATPFRGSSR  289 (426)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwSlG~il~ell~g~~pf~~~~~  289 (426)
                                         .....+| +.|+|||++.+.           .++.++|||||||++|||++|+.||.+.+.
T Consensus       259 -------------------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~  318 (377)
T 3byv_A          259 -------------------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAA  318 (377)
T ss_dssp             -------------------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             -------------------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccccc
Confidence                               2234468 999999999987           899999999999999999999999987765


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       290 ~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ......+....   ...+..+.+||.+||+.||.+|||+.++++||||+++
T Consensus       319 ~~~~~~~~~~~---~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          319 LGGSEWIFRSC---KNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             -CCSGGGGSSC---CCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             ccchhhhhhhc---cCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            55444444332   4558999999999999999999999999999999753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=4.2e-49  Score=387.05  Aligned_cols=259  Identities=19%  Similarity=0.306  Sum_probs=219.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc-------CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV-------ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN   82 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-------~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~   82 (426)
                      .+.+..++|++++.||+|+||+||+|++.       .++..||||++....            .......+.+|+.+|+.
T Consensus        75 ~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~  142 (370)
T 2psq_A           75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA------------TEKDLSDLVSEMEMMKM  142 (370)
T ss_dssp             TTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC------------BHHHHHHHHHHHHHHHH
T ss_pred             cccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc------------CHHHHHHHHHHHHHHHH
Confidence            34567789999999999999999999975       345679999985431            12345678899999999


Q ss_pred             c-CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           83 V-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        83 l-~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      + +||||+++++++..++.+|+|||||+||+|.+++....              ...++...+..++.||+.||+|||++
T Consensus       143 l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  222 (370)
T 2psq_A          143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ  222 (370)
T ss_dssp             SCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9 89999999999999999999999999999999987653              23488999999999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      ||+||||||+|||++.+|.+||+|||++..+.....                                            
T Consensus       223 ~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--------------------------------------------  258 (370)
T 2psq_A          223 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY--------------------------------------------  258 (370)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCT--------------------------------------------
T ss_pred             CeeccccchhhEEECCCCCEEEccccCCcccCcccc--------------------------------------------
Confidence            999999999999999999999999999986542110                                            


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCC
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLV  304 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~  304 (426)
                                ........||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+.+..+...  +....
T Consensus       259 ----------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~  328 (370)
T 2psq_A          259 ----------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA  328 (370)
T ss_dssp             ----------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT
T ss_pred             ----------eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence                      011223457899999999999999999999999999999998 99999998877776665533  23344


Q ss_pred             CCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       305 ~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ..+..+.+||.+||..||.+|||+.|++++
T Consensus       329 ~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          329 NCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            668899999999999999999999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=4.3e-49  Score=383.91  Aligned_cols=268  Identities=27%  Similarity=0.361  Sum_probs=216.2

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++...            ........+.+|+.+|+.++||||++++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   77 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF------------DKPLFALRTLREIKILKHFKHENIITIFNI   77 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC------------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc------------ccchHHHHHHHHHHHHHhCcCCCcCCeeee
Confidence            36799999999999999999999999999999998432            122345577889999999999999999998


Q ss_pred             eecC-----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           95 LSTD-----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        95 ~~~~-----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +..+     ...|+||||+. ++|.+++..   +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        78 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl  153 (353)
T 2b9h_A           78 QRPDSFENFNEVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV  153 (353)
T ss_dssp             CCCSCSTTCCCEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred             ecccccCccceEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEE
Confidence            7654     78999999997 689888765   35999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+.........                                              ...........+||+.
T Consensus       154 ~Dfg~a~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~gt~~  187 (353)
T 2b9h_A          154 CDFGLARIIDESAADNSE----------------------------------------------PTGQQSGMVEFVATRW  187 (353)
T ss_dssp             CCCTTCEECC--------------------------------------------------------------CCCCCCGG
T ss_pred             EecccccccccccccccC----------------------------------------------ccccccchhhcccccc
Confidence            999999876432110000                                              0000112334679999


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCCC------------------------
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPP------------------------  301 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~------------------------  301 (426)
                      |+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+.   ..+.                        
T Consensus       188 y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (353)
T 2b9h_A          188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYP  267 (353)
T ss_dssp             GCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCC
T ss_pred             ccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCC
Confidence            999998765 678999999999999999999999999988766554432   1111                        


Q ss_pred             ------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          302 ------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       302 ------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                            .....+..+.+||.+||..||++|||++|+++||||+...+..
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  316 (353)
T 2b9h_A          268 AAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN  316 (353)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred             CcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcc
Confidence                  0124578899999999999999999999999999999876544

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.3e-49  Score=373.04  Aligned_cols=259  Identities=25%  Similarity=0.354  Sum_probs=219.9

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ..++|++++.||+|+||.||+|++..+++.||+|++.....           .....+.+..|+.+++.++||||+++++
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~i~~~~~   72 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-----------TEAEKQMLVSEVNLLRELKHPNIVRYYD   72 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-----------CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-----------CHHHHHHHHHHHHHHHhcCCCCCCeEEE
Confidence            46789999999999999999999999999999999965422           1234567889999999999999999999


Q ss_pred             eee--cCCeEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCCCCeeeccC
Q 014344           94 VLS--TDKFVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNMG-----IVYRDLKPENIMIQEN  164 (426)
Q Consensus        94 ~~~--~~~~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~g-----iiHrDlKp~NiLl~~~  164 (426)
                      ++.  ....+|+||||++|++|.+++....  ...+++..+..++.||+.||.|||++|     |+||||||+|||++.+
T Consensus        73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~  152 (279)
T 2w5a_A           73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK  152 (279)
T ss_dssp             EEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSS
T ss_pred             EEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCC
Confidence            874  4678999999999999999887543  345999999999999999999999999     9999999999999999


Q ss_pred             CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014344          165 GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF  244 (426)
Q Consensus       165 g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (426)
                      +.+||+|||++.......                                                        ......
T Consensus       153 ~~~kl~dfg~~~~~~~~~--------------------------------------------------------~~~~~~  176 (279)
T 2w5a_A          153 QNVKLGDFGLARILNHDT--------------------------------------------------------SFAKTF  176 (279)
T ss_dssp             SCEEECCCCHHHHC---C--------------------------------------------------------HHHHHH
T ss_pred             CCEEEecCchheeecccc--------------------------------------------------------cccccc
Confidence            999999999987653210                                                        012234


Q ss_pred             ccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCC
Q 014344          245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       245 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      .||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+....  ......+..+.+||.+||..||
T Consensus       177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p  256 (279)
T 2w5a_A          177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKD  256 (279)
T ss_dssp             HSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999999999999999988877766665332  2333568899999999999999


Q ss_pred             CCCCChHHHhcCCCcCC
Q 014344          323 TKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~  339 (426)
                      .+|||+.||++|+|+.+
T Consensus       257 ~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          257 YHRPSVEEILENPLILE  273 (279)
T ss_dssp             GGSCCHHHHHTSTTCCG
T ss_pred             ccCCCHHHHHhChhhhh
Confidence            99999999999999964

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3.3e-49  Score=390.43  Aligned_cols=257  Identities=26%  Similarity=0.402  Sum_probs=209.5

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--CCCccee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--HPLLPRL   91 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~iv~l   91 (426)
                      ...+|++++.||+|+||+||+|.+.. ++.||||++.+...           .......+.+|+.+|+.+.  ||||+++
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-----------~~~~~~~~~~Ei~~l~~l~~~~~~iv~~  121 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-----------DNQTLDSYRNEIAYLNKLQQHSDKIIRL  121 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-----------CHHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-----------cHHHHHHHHHHHHHHHHcccCCCeEEEE
Confidence            34569999999999999999999865 89999999865321           2234567889999999997  5999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++..++.+|+||| +.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|
T Consensus       122 ~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~D  197 (390)
T 2zmd_A          122 YDYEITDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLID  197 (390)
T ss_dssp             EEEEECSSEEEEEEE-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECC
T ss_pred             EEEEecCCEEEEEEe-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEe
Confidence            999999999999999 56899999987643  589999999999999999999999999999999999995 68999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++..+.....                                                      .......+||+.|+
T Consensus       198 FG~a~~~~~~~~------------------------------------------------------~~~~~~~~gt~~y~  223 (390)
T 2zmd_A          198 FGIANQMQPDTT------------------------------------------------------SVVKDSQVGAVNYM  223 (390)
T ss_dssp             CSSSCCC---------------------------------------------------------------CCSCCCGGGC
T ss_pred             cCccccccCCCc------------------------------------------------------cccCCCCCcCCCcc
Confidence            999986642110                                                      01123457999999


Q ss_pred             cchhhcC-----------CCCChhhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCC---CCCCCCCHHHHHHHHH
Q 014344          252 APEIIEG-----------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCRP---PDLVGEPTPLRNLIRR  316 (426)
Q Consensus       252 aPE~~~~-----------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~---~~~~~~~~~~~~li~~  316 (426)
                      |||++.+           ..++.++|||||||++|+|++|+.||..... ...+..++...   ......+..+.+||.+
T Consensus       224 aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  303 (390)
T 2zmd_A          224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKC  303 (390)
T ss_dssp             CHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHH
T ss_pred             ChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHH
Confidence            9999975           3689999999999999999999999987643 34455554322   1122346789999999


Q ss_pred             HhccCCCCCCChHHHhcCCCcCCC
Q 014344          317 LLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ||+.||.+|||+.|+|+||||+..
T Consensus       304 ~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          304 CLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HcccChhhCCCHHHHhhCcCcccc
Confidence            999999999999999999999743

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=3.1e-49  Score=378.53  Aligned_cols=255  Identities=20%  Similarity=0.296  Sum_probs=210.1

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+..++|++.+.||+|+||+||+|++  +++.||||++.....           .....+.+.+|+.+|++++||||+
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~hp~iv   97 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-----------HAERVNEFLREVAIMKRLRHPNIV   97 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-----------SHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-----------CHHHHHHHHHHHHHHHhCCCCCEe
Confidence            4567788999999999999999999986  688999999854321           223456788999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeeeccCCc
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQENGH  166 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~-~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiLl~~~g~  166 (426)
                      ++++++.....+|+|||||+|++|.+++.... ...+++..+..++.||+.||+|||++|  |+||||||+|||++.++.
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~  177 (309)
T 3p86_A           98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT  177 (309)
T ss_dssp             CEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCC
T ss_pred             eEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCc
Confidence            99999999999999999999999999887532 123899999999999999999999999  999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++......                                                        .......+|
T Consensus       178 ~kL~Dfg~a~~~~~~--------------------------------------------------------~~~~~~~~g  201 (309)
T 3p86_A          178 VKVCDFGLSRLKAST--------------------------------------------------------FLSSKSAAG  201 (309)
T ss_dssp             EEECCCC-------------------------------------------------------------------------
T ss_pred             EEECCCCCCcccccc--------------------------------------------------------ccccccCCC
Confidence            999999998754211                                                        011234569


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      |+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+..   ........++.+.+||.+||+.||.
T Consensus       202 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~  281 (309)
T 3p86_A          202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPW  281 (309)
T ss_dssp             CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             CccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChh
Confidence            9999999999999999999999999999999999999999988877666532   2233345688999999999999999


Q ss_pred             CCCChHHHhc
Q 014344          324 KRIGVEEIKG  333 (426)
Q Consensus       324 ~R~s~~eil~  333 (426)
                      +|||+.++++
T Consensus       282 ~Rps~~~ll~  291 (309)
T 3p86_A          282 KRPSFATIMD  291 (309)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999987

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.9e-49  Score=380.50  Aligned_cols=272  Identities=20%  Similarity=0.280  Sum_probs=203.9

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCc---eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSE---SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      ....+..++|++++.||+|+||+||+|++..+++   .||||++......           ....+.+.+|+.+++.++|
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h   84 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA-----------SSDIEEFLREAACMKEFDH   84 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-----------------CHHHHHHHHHHHHHTTCCC
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC-----------HHHHHHHHHHHHHHHHCCC
Confidence            3445677889999999999999999999887765   8999998544321           2245678899999999999


Q ss_pred             CCcceeeeeeecCCeE------EEEEeccCCCChHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 014344           86 PLLPRLRGVLSTDKFV------GYAIDYCPGRDLHSLRKQQSE----QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLK  155 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~------~lV~Ey~~gg~L~~l~~~~~~----~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlK  155 (426)
                      |||+++++++......      ++||||+.+++|.+++.....    ..+++..+..++.||+.||.|||++||+|||||
T Consensus        85 ~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dik  164 (323)
T 3qup_A           85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLA  164 (323)
T ss_dssp             TTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCC
Confidence            9999999999877655      999999999999998765432    248999999999999999999999999999999


Q ss_pred             CCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          156 PENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDS  235 (426)
Q Consensus       156 p~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (426)
                      |+|||++.++.+||+|||++........                                                    
T Consensus       165 p~NIli~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------------------  192 (323)
T 3qup_A          165 ARNCMLAEDMTVCVADFGLSRKIYSGDY----------------------------------------------------  192 (323)
T ss_dssp             GGGEEECTTSCEEECCCCC-------------------------------------------------------------
T ss_pred             cceEEEcCCCCEEEeecccccccccccc----------------------------------------------------
Confidence            9999999999999999999976532110                                                    


Q ss_pred             CCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHH
Q 014344          236 DSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRN  312 (426)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  312 (426)
                        ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...  .......+..+.+
T Consensus       193 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  270 (323)
T 3qup_A          193 --YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYD  270 (323)
T ss_dssp             ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             --ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHH
Confidence              011122347889999999999999999999999999999999 99999998887777776643  3344566889999


Q ss_pred             HHHHHhccCCCCCCC-------hHHHhcCCCcCCCChhhh
Q 014344          313 LIRRLLEKDPTKRIG-------VEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       313 li~~~L~~dP~~R~s-------~~eil~hp~f~~~~~~~~  345 (426)
                      ||.+||+.||.+|||       +++++.|||+....++.+
T Consensus       271 li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl  310 (323)
T 3qup_A          271 LMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPL  310 (323)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----------
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCC
Confidence            999999999999999       778889999976554433

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=6.3e-50  Score=385.25  Aligned_cols=264  Identities=26%  Similarity=0.434  Sum_probs=210.5

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||||++.+.......     .........+.+|+.+|+.++||||+++++++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   84 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGS-----AREADPALNVETEIEILKKLNHPCIIKIKNFF   84 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC--------------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcc-----cccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence            4699999999999999999999999999999999664432110     01112345678899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc---EEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH---IMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~---ikL~DF  172 (426)
                      ..+. .|+||||++|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+||
T Consensus        85 ~~~~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Df  161 (322)
T 2ycf_A           85 DAED-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF  161 (322)
T ss_dssp             ESSS-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred             cCCc-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccC
Confidence            7665 89999999999999887643  45999999999999999999999999999999999999987664   999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++......                                                         ......+||+.|+|
T Consensus       162 g~~~~~~~~---------------------------------------------------------~~~~~~~gt~~y~a  184 (322)
T 2ycf_A          162 GHSKILGET---------------------------------------------------------SLMRTLCGTPTYLA  184 (322)
T ss_dssp             TTCEECCCC---------------------------------------------------------HHHHHHHSCCTTCC
T ss_pred             ccceecccc---------------------------------------------------------cccccccCCcCccC
Confidence            998765311                                                         11234469999999


Q ss_pred             chhhc---CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhcCCCC-----CCCCCHHHHHHHHHHhccCCC
Q 014344          253 PEIIE---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-TFYRILCRPPD-----LVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       253 PE~~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP~  323 (426)
                      ||++.   ...++.++|||||||++|+|++|..||....... ....+......     ....+..+.+||.+||..||.
T Consensus       185 PE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  264 (322)
T 2ycf_A          185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK  264 (322)
T ss_dssp             HHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTT
T ss_pred             chhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHh
Confidence            99974   4668899999999999999999999998654332 22222222111     134578899999999999999


Q ss_pred             CCCChHHHhcCCCcCCCChhh
Q 014344          324 KRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       324 ~R~s~~eil~hp~f~~~~~~~  344 (426)
                      +|||+.++++||||++.+|..
T Consensus       265 ~Rps~~~~l~h~~~~~~~~~~  285 (322)
T 2ycf_A          265 ARFTTEEALRHPWLQDEDMKR  285 (322)
T ss_dssp             TSCCHHHHHTSGGGCCHHHHH
T ss_pred             hCCCHHHHhhCcCcCCHHHHH
Confidence            999999999999999876653

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.1e-50  Score=398.43  Aligned_cols=260  Identities=22%  Similarity=0.247  Sum_probs=197.1

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc--CCCCcceee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV--EHPLLPRLR   92 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l--~hp~iv~l~   92 (426)
                      ..+|++++.||+|+||+||+|++..+++.||||++.+.....          ......+..|+.+++.|  +||||++++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~~~E~~~~~~l~~~hp~iv~~~  130 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS----------RSELERLHEATFAAARLLGESPEEARDR  130 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH----------HHHHHHHHHHHHHHHHHHC---------
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc----------ccHHHHHHHHHHHHHHhcccChhhhhhc
Confidence            345999999999999999999999999999999996643211          12345677785555555  699988755


Q ss_pred             -------eeeecC-----------------CeEEEEEeccCCCChHHHHHHhccCCCCHHHH------HHHHHHHHHHHH
Q 014344           93 -------GVLSTD-----------------KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI------RFYAAELVLALE  142 (426)
Q Consensus        93 -------~~~~~~-----------------~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~------~~~~~qil~aL~  142 (426)
                             +++..+                 ..+|+|||||+ |+|.+++..... .++....      ..++.||+.||+
T Consensus       131 ~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~  208 (371)
T 3q60_A          131 RRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAA  208 (371)
T ss_dssp             -CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHH
Confidence                   444433                 34899999998 899999876533 2455555      567799999999


Q ss_pred             HHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCC
Q 014344          143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHS  222 (426)
Q Consensus       143 ~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (426)
                      |||++||+||||||+|||++.+|.+||+|||+++....                                          
T Consensus       209 ~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------------------------------------------  246 (371)
T 3q60_A          209 NLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT------------------------------------------  246 (371)
T ss_dssp             HHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTC------------------------------------------
T ss_pred             HHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCC------------------------------------------
Confidence            99999999999999999999999999999999976521                                          


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC--CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH--
Q 014344          223 PRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET--FYRI--  296 (426)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~i--  296 (426)
                                       ......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+......  +...  
T Consensus       247 -----------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~  309 (371)
T 3q60_A          247 -----------------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSL  309 (371)
T ss_dssp             -----------------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCT
T ss_pred             -----------------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhh
Confidence                             1113357799999999987  7799999999999999999999999987743211  1100  


Q ss_pred             ---h---cCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhhh
Q 014344          297 ---L---CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELL  345 (426)
Q Consensus       297 ---~---~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~~  345 (426)
                         .   ...+.....+..+.+||.+||+.||++|||+.++|+||||+++.|..-
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  364 (371)
T 3q60_A          310 RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEIS  364 (371)
T ss_dssp             TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHHH
T ss_pred             hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHHh
Confidence               0   011222356889999999999999999999999999999998777654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.2e-49  Score=395.64  Aligned_cols=258  Identities=26%  Similarity=0.383  Sum_probs=193.2

Q ss_pred             CcEE-EeeecccCceEEEEEEEc--CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           17 CLRI-VSALGRGAKGVVFLVKDV--ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        17 ~y~i-~~~LG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .|++ .++||+|+||+||+|+++  .+++.||||++....               ....+.+|+.+|+.++||||+++++
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~E~~~l~~l~hpniv~~~~   85 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---------------ISMSACREIALLRELKHPNVISLQK   85 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---------------CCHHHHHHHHHHHHCCCTTBCCCCE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---------------CCHHHHHHHHHHHhcCCCCeeeEee
Confidence            3666 468999999999999966  578899999984321               2245778999999999999999999


Q ss_pred             eee--cCCeEEEEEeccCCCChHHHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee---
Q 014344           94 VLS--TDKFVGYAIDYCPGRDLHSLRKQQS-------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI---  161 (426)
Q Consensus        94 ~~~--~~~~~~lV~Ey~~gg~L~~l~~~~~-------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl---  161 (426)
                      +|.  .+..+|+|||||. ++|.+++....       ...+++..++.++.||+.||.|||++||+||||||+|||+   
T Consensus        86 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~  164 (405)
T 3rgf_A           86 VFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGE  164 (405)
T ss_dssp             EEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCS
T ss_pred             EEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecC
Confidence            994  5789999999996 67877765322       1249999999999999999999999999999999999999   


Q ss_pred             -ccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          162 -QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       162 -~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                       +.++.+||+|||+++.+.....                                                     ....
T Consensus       165 ~~~~~~~kl~Dfg~a~~~~~~~~-----------------------------------------------------~~~~  191 (405)
T 3rgf_A          165 GPERGRVKIADMGFARLFNSPLK-----------------------------------------------------PLAD  191 (405)
T ss_dssp             STTTTCEEECCTTCCC----------------------------------------------------------------
T ss_pred             CCCCCcEEEEECCCceecCCCCc-----------------------------------------------------cccc
Confidence             6778999999999986532110                                                     0112


Q ss_pred             ccccccCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHh---cCCCC-----
Q 014344          241 SNSFVGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---------ETFYRIL---CRPPD-----  302 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---------~~~~~i~---~~~~~-----  302 (426)
                      ....+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+....         +.+.+++   ..+..     
T Consensus       192 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~  271 (405)
T 3rgf_A          192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWED  271 (405)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGG
T ss_pred             CCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcch
Confidence            3445799999999999874 5899999999999999999999999876542         3333322   11111     


Q ss_pred             -------------------------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          303 -------------------------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       303 -------------------------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                                                     ....+..+.+||.+||+.||.+|||++|+|+||||++..|.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~  343 (405)
T 3rgf_A          272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLP  343 (405)
T ss_dssp             GGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCC
T ss_pred             hhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCC
Confidence                                           01125678899999999999999999999999999875443

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.5e-49  Score=379.56  Aligned_cols=260  Identities=24%  Similarity=0.390  Sum_probs=209.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||.||+|.+..+++.||||++...             .....+.+.+|+.+++.++||||++++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   76 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-------------DPQSVKHALREIKIIRRLDHDNIVKVFEI   76 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC-------------SHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC-------------ChHHHHHHHHHHHHHHhcCCCCeeEEEEe
Confidence            35799999999999999999999999999999998432             12345678889999999999999999998


Q ss_pred             ee--------------cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCee
Q 014344           95 LS--------------TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIM  160 (426)
Q Consensus        95 ~~--------------~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiL  160 (426)
                      +.              ....+|+||||+. |+|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil  152 (320)
T 2i6l_A           77 LGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLF  152 (320)
T ss_dssp             ECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEE
T ss_pred             ccccccccccccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEE
Confidence            73              4478999999997 689888753   45999999999999999999999999999999999999


Q ss_pred             ec-cCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          161 IQ-ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE  239 (426)
Q Consensus       161 l~-~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (426)
                      ++ .++.+||+|||++........                                                     ...
T Consensus       153 ~~~~~~~~kl~Dfg~~~~~~~~~~-----------------------------------------------------~~~  179 (320)
T 2i6l_A          153 INTEDLVLKIGDFGLARIMDPHYS-----------------------------------------------------HKG  179 (320)
T ss_dssp             EETTTTEEEECCCTTCBCC-------------------------------------------------------------
T ss_pred             EcCCCCeEEEccCccccccCCCcc-----------------------------------------------------ccc
Confidence            97 567999999999986532110                                                     011


Q ss_pred             CccccccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC----------------
Q 014344          240 KSNSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----------------  302 (426)
Q Consensus       240 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----------------  302 (426)
                      ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+....+.                
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (320)
T 2i6l_A          180 HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVY  259 (320)
T ss_dssp             CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHH
T ss_pred             ccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccc
Confidence            2234468999999999876 67899999999999999999999999998877766555422110                


Q ss_pred             ---------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChhh
Q 014344          303 ---------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       303 ---------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~~  344 (426)
                                     ....+..+.+||.+||+.||.+|||++++++||||+...|..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~  316 (320)
T 2i6l_A          260 IRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM  316 (320)
T ss_dssp             HHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred             ccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence                           124578899999999999999999999999999998776644

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1e-49  Score=390.99  Aligned_cols=263  Identities=17%  Similarity=0.241  Sum_probs=220.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEE-----EcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVK-----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~-----~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      ...+..++|++++.||+|+||+||+|+     +..+++.||||++....            .......+.+|+.+|+.++
T Consensus        65 ~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~  132 (367)
T 3l9p_A           65 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC------------SEQDELDFLMEALIISKFN  132 (367)
T ss_dssp             SCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC------------CHHHHHHHHHHHHHHHHCC
T ss_pred             hhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc------------ChhhHHHHHHHHHHHHhCC
Confidence            345677899999999999999999999     45678899999984321            1223456788999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCe
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE-----QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENI  159 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~-----~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~Ni  159 (426)
                      ||||+++++++......|+|||||+||+|.+++.....     ..++...+..++.||+.||+|||++||+||||||+||
T Consensus       133 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  212 (367)
T 3l9p_A          133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC  212 (367)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             CCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhE
Confidence            99999999999999999999999999999999876542     3589999999999999999999999999999999999


Q ss_pred             eeccCC---cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          160 MIQENG---HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD  236 (426)
Q Consensus       160 Ll~~~g---~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (426)
                      |++.+|   .+||+|||+++.+....                                                      
T Consensus       213 ll~~~~~~~~~kL~DFG~a~~~~~~~------------------------------------------------------  238 (367)
T 3l9p_A          213 LLTCPGPGRVAKIGDFGMARDIYRAG------------------------------------------------------  238 (367)
T ss_dssp             EESCSSTTCCEEECCCHHHHHHHHHS------------------------------------------------------
T ss_pred             EEecCCCCceEEECCCcccccccccc------------------------------------------------------
Confidence            999655   59999999997542110                                                      


Q ss_pred             CCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHH
Q 014344          237 SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNL  313 (426)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~l  313 (426)
                      ........+||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+....  ......+..+.+|
T Consensus       239 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l  318 (367)
T 3l9p_A          239 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI  318 (367)
T ss_dssp             SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHH
Confidence            0112334568999999999999999999999999999999998 999999999888877776432  3344668899999


Q ss_pred             HHHHhccCCCCCCChHHHhcCCCcC
Q 014344          314 IRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                      |.+||+.||.+|||+.+|++|.++-
T Consensus       319 i~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          319 MTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999999997653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=9.1e-49  Score=382.04  Aligned_cols=253  Identities=26%  Similarity=0.414  Sum_probs=211.8

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++.+.||+|+||.||+|++..+|+.||||++....           ........+.+|+.+++.++||||+++++++
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   92 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-----------QSEIFAKRAYRELLLLKHMQHENVIGLLDVF   92 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-----------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-----------cchHHHHHHHHHHHHHHhcCCCCcccHhheE
Confidence            57999999999999999999999999999999985432           1223456788899999999999999999999


Q ss_pred             ecCCe------EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           96 STDKF------VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        96 ~~~~~------~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      .....      +|+||||+. ++|.+++.    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        93 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl  167 (353)
T 3coi_A           93 TPASSLRNFYDFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKI  167 (353)
T ss_dssp             CSCSSGGGCCCCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEE
T ss_pred             ecccccccceeEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEE
Confidence            87654      499999997 68877653    34999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.....                                                           .....+||+.
T Consensus       168 ~Dfg~~~~~~~-----------------------------------------------------------~~~~~~~t~~  188 (353)
T 3coi_A          168 LDFGLARHADA-----------------------------------------------------------EMTGYVVTRW  188 (353)
T ss_dssp             CSTTCTTC-------------------------------------------------------------------CCSBC
T ss_pred             eecccccCCCC-----------------------------------------------------------CccccccCcC
Confidence            99999875421                                                           1123468999


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----------------------------
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----------------------------  299 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~-----------------------------  299 (426)
                      |+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...                             
T Consensus       189 y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (353)
T 3coi_A          189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR  268 (353)
T ss_dssp             CSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSS
T ss_pred             cCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCC
Confidence            999999987 67899999999999999999999999998876665544310                             


Q ss_pred             ---CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          300 ---PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       300 ---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                         .......+..+.+||.+||..||.+|||++++++||||+.....
T Consensus       269 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~  315 (353)
T 3coi_A          269 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP  315 (353)
T ss_dssp             CCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             ccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCc
Confidence               01123457889999999999999999999999999999876543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.2e-49  Score=374.04  Aligned_cols=256  Identities=28%  Similarity=0.440  Sum_probs=219.4

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||.||+|++..+++.||||++.+....           ......+.+|+.++++++||||+++++++
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-----------NKDTSTILREVELLKKLDHPNIMKLFEIL   90 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-----------SSCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-----------hHHHHHHHHHHHHHHhccCCCccEEEEEE
Confidence            5799999999999999999999999999999998654311           12356788899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC---CcEEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN---GHIMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~---g~ikL~DF  172 (426)
                      .....+|+||||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+||+||
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Df  168 (287)
T 2wei_A           91 EDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF  168 (287)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred             eCCCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEecc
Confidence            99999999999999999998876543  49999999999999999999999999999999999999764   47999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++.......                                                         ......||+.|+|
T Consensus       169 g~~~~~~~~~---------------------------------------------------------~~~~~~~~~~y~a  191 (287)
T 2wei_A          169 GLSTCFQQNT---------------------------------------------------------KMKDRIGTAYYIA  191 (287)
T ss_dssp             TGGGTBCCCS---------------------------------------------------------SCSCHHHHHTTCC
T ss_pred             CcceeecCCC---------------------------------------------------------ccccccCcccccC
Confidence            9987653211                                                         1223458999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----DLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+. ++.++|||||||++|+|++|..||.+.+..+....+.....     .....+..+.+||.+||..||.+|||
T Consensus       192 PE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  270 (287)
T 2wei_A          192 PEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT  270 (287)
T ss_dssp             HHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcC
Confidence            9999765 89999999999999999999999999888877776654322     12356888999999999999999999


Q ss_pred             hHHHhcCCCcCCCCh
Q 014344          328 VEEIKGHEFFKGVNW  342 (426)
Q Consensus       328 ~~eil~hp~f~~~~~  342 (426)
                      +.++++||||++..|
T Consensus       271 ~~ell~hp~~~~~~~  285 (287)
T 2wei_A          271 ATQCLEHPWIQKYSS  285 (287)
T ss_dssp             HHHHHHSHHHHHHCC
T ss_pred             HHHHhcCHHHhcccc
Confidence            999999999976443

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-49  Score=382.73  Aligned_cols=254  Identities=26%  Similarity=0.388  Sum_probs=209.1

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ..-++|++++.||+|+||+||+|++..+++.||||++......            ...+.+.+|+.+|+.++||||++++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~   73 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL------------RPVDVQMREFEVLKKLNHKNIVKLF   73 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG------------SCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc------------chHHHHHHHHHHHHhcCCCCcceEE
Confidence            3446799999999999999999999999999999999643221            1245677899999999999999999


Q ss_pred             eeeecCC--eEEEEEeccCCCChHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee----ccCC
Q 014344           93 GVLSTDK--FVGYAIDYCPGRDLHSLRKQQSE-QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI----QENG  165 (426)
Q Consensus        93 ~~~~~~~--~~~lV~Ey~~gg~L~~l~~~~~~-~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl----~~~g  165 (426)
                      +++....  .+|+|||||+|++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~  153 (319)
T 4euu_A           74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQS  153 (319)
T ss_dssp             EEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCE
T ss_pred             EEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCc
Confidence            9997655  88999999999999999876433 339999999999999999999999999999999999999    7788


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++.......                                                         .....+
T Consensus       154 ~~kL~Dfg~a~~~~~~~---------------------------------------------------------~~~~~~  176 (319)
T 4euu_A          154 VYKLTDFGAARELEDDE---------------------------------------------------------QFVSLY  176 (319)
T ss_dssp             EEEECCCTTCEECCTTC---------------------------------------------------------CBCCCC
T ss_pred             eEEEccCCCceecCCCC---------------------------------------------------------ceeecc
Confidence            89999999997653211                                                         123456


Q ss_pred             cCCCCccchhhc--------CCCCChhhHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCCC-----------
Q 014344          246 GTEEYVAPEIIE--------GKGHDFAVDWWSLGVVLHEMLYGATPFRGSS----RKETFYRILCRPPD-----------  302 (426)
Q Consensus       246 gt~~y~aPE~~~--------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~~~~i~~~~~~-----------  302 (426)
                      ||+.|+|||++.        +..++.++|||||||++|+|++|+.||....    ..+...+++...+.           
T Consensus       177 gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (319)
T 4euu_A          177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN  256 (319)
T ss_dssp             SCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTT
T ss_pred             cCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccC
Confidence            999999999986        5778999999999999999999999997433    23444454432221           


Q ss_pred             --------CC-------CCCHHHHHHHHHHhccCCCCCCChHHHhcCC
Q 014344          303 --------LV-------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHE  335 (426)
Q Consensus       303 --------~~-------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp  335 (426)
                              ..       ..+..+.+||++||+.||++|||++|+|+||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          257 GPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             CCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             CccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence                    00       1134688999999999999999999999997

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=8.7e-49  Score=373.82  Aligned_cols=252  Identities=26%  Similarity=0.414  Sum_probs=219.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|++++.||+|+||.||+|++..+++.||||++....            .....+.+.+|+.+++.++||||+++++++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   89 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE------------AEDEIEDIQQEITVLSQCDSPYVTKYYGSY   89 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT------------CSTTHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc------------cHHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            46999999999999999999999999999999985432            122456788999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      ..+..+|+||||++|++|.+++..   ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~  166 (303)
T 3a7i_A           90 LKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA  166 (303)
T ss_dssp             EETTEEEEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ecCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccc
Confidence            999999999999999999998753   45999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      .......                                                        ......+||+.|+|||+
T Consensus       167 ~~~~~~~--------------------------------------------------------~~~~~~~~~~~y~aPE~  190 (303)
T 3a7i_A          167 GQLTDTQ--------------------------------------------------------IKRNTFVGTPFWMAPEV  190 (303)
T ss_dssp             EECBTTB--------------------------------------------------------CCBCCCCSCGGGCCHHH
T ss_pred             eecCccc--------------------------------------------------------cccCccCCCcCccCHHH
Confidence            7653211                                                        11234569999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+..++.++|||||||++|+|++|+.||...........+....  ......+..+.+||.+||..||.+|||+.++++
T Consensus       191 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          191 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             HTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            999999999999999999999999999999888777665554322  223356888999999999999999999999999


Q ss_pred             CCCcC
Q 014344          334 HEFFK  338 (426)
Q Consensus       334 hp~f~  338 (426)
                      ||||.
T Consensus       271 ~~~~~  275 (303)
T 3a7i_A          271 HKFIL  275 (303)
T ss_dssp             CHHHH
T ss_pred             Chhhh
Confidence            99995

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.8e-49  Score=386.28  Aligned_cols=257  Identities=26%  Similarity=0.439  Sum_probs=199.5

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ..+++|++++.||+|+||+||+|++..+++.||||++....              ....+...|+..++.++||||++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~l~~l~h~niv~~~   85 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--------------RFRNRELQIMQDLAVLHHPNIVQLQ   85 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--------------TCCCHHHHHHHHHHHHCCTTBCCEE
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--------------cccHHHHHHHHHHHhcCCCCcccHH
Confidence            45678999999999999999999999999999999884321              1123456678888999999999999


Q ss_pred             eeeecCC-------eEEEEEeccCCCChHHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHH--HCCCcccCCCCCCeee
Q 014344           93 GVLSTDK-------FVGYAIDYCPGRDLHSLRKQ--QSEQMFSDDTIRFYAAELVLALEYLH--NMGIVYRDLKPENIMI  161 (426)
Q Consensus        93 ~~~~~~~-------~~~lV~Ey~~gg~L~~l~~~--~~~~~l~~~~~~~~~~qil~aL~~LH--~~giiHrDlKp~NiLl  161 (426)
                      ++|....       ++++|||||.++ |...+..  .....+++..++.++.||+.||.|||  ++||+||||||+|||+
T Consensus        86 ~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll  164 (360)
T 3e3p_A           86 SYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV  164 (360)
T ss_dssp             EEEEEECSSCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEE
T ss_pred             HhhhccccccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEE
Confidence            9996533       389999999864 4443332  23456899999999999999999999  9999999999999999


Q ss_pred             cc-CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          162 QE-NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       162 ~~-~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                      +. ++.+||+|||++..+....                                                         .
T Consensus       165 ~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------------------~  187 (360)
T 3e3p_A          165 NEADGTLKLCDFGSAKKLSPSE---------------------------------------------------------P  187 (360)
T ss_dssp             ETTTTEEEECCCTTCBCCCTTS---------------------------------------------------------C
T ss_pred             eCCCCcEEEeeCCCceecCCCC---------------------------------------------------------C
Confidence            97 8999999999998654211                                                         1


Q ss_pred             ccccccCCCCccchhhcCCC-CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C----------------
Q 014344          241 SNSFVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P----------------  300 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~----------------  300 (426)
                      ....+||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+....+..+...   +                
T Consensus       188 ~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (360)
T 3e3p_A          188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVD  267 (360)
T ss_dssp             CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGG
T ss_pred             cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhcc
Confidence            22446899999999997654 899999999999999999999999999887776655321   0                


Q ss_pred             --------------CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          301 --------------PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       301 --------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                                    ......+..+.+||.+||+.||.+|||+.|+|+||||+++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          268 LYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             GGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             ccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence                          01112356799999999999999999999999999998754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=7e-49  Score=368.05  Aligned_cols=254  Identities=20%  Similarity=0.285  Sum_probs=217.9

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.++.++|++++.||+|+||+||+|++. +++.||+|++.....              ..+.+.+|+.++++++||||+
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~E~~~l~~l~h~~i~   68 (269)
T 4hcu_A            4 KWVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM--------------SEEDFIEEAEVMMKLSHPKLV   68 (269)
T ss_dssp             -CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB--------------CHHHHHHHHHHHHTCCCTTBC
T ss_pred             cEEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc--------------CHHHHHHHHHHHHhCCCCCEe
Confidence            35678889999999999999999999986 577899999854321              224678899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.++...|+||||++|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        69 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl  147 (269)
T 4hcu_A           69 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV  147 (269)
T ss_dssp             CEEEEECSSSSEEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEE
T ss_pred             eEEEEEecCCceEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEe
Confidence            99999999999999999999999999986543 45999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                       ........||+.
T Consensus       148 ~Dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~  172 (269)
T 4hcu_A          148 SDFGMTRFVLDDQ-------------------------------------------------------YTSSTGTKFPVK  172 (269)
T ss_dssp             CCTTGGGGBCCHH-------------------------------------------------------HHSTTSTTCCGG
T ss_pred             ccccccccccccc-------------------------------------------------------cccccCcccccc
Confidence            9999997653210                                                       001122347888


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+...  .......+..+.+||.+||+.||++||
T Consensus       173 y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (269)
T 4hcu_A          173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRP  252 (269)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCc
Confidence            999999999999999999999999999999 99999999988887777643  223334588899999999999999999


Q ss_pred             ChHHHhcC
Q 014344          327 GVEEIKGH  334 (426)
Q Consensus       327 s~~eil~h  334 (426)
                      |+.++++|
T Consensus       253 s~~~ll~~  260 (269)
T 4hcu_A          253 AFSRLLRQ  260 (269)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999976

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=8.5e-49  Score=378.16  Aligned_cols=257  Identities=23%  Similarity=0.344  Sum_probs=217.9

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCc---eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSE---SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      +.+..++|++.+.||+|+||+||+|++..+++   .||||++....            .....+.+.+|+.+|+.++|||
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~  111 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY------------TERQRRDFLSEASIMGQFDHPN  111 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC------------CHHHHHHHHHHHHHHTTCCCTT
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC------------CHHHHHHHHHHHHHHHhCCCCC
Confidence            45778899999999999999999999986655   49999985421            1234567889999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |+++++++.+.+..|+|||||+|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus       112 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~  190 (325)
T 3kul_A          112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVC  190 (325)
T ss_dssp             BCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred             CCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCE
Confidence            9999999999999999999999999999986543 459999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++..+......                                                     ........+|
T Consensus       191 kl~Dfg~a~~~~~~~~~-----------------------------------------------------~~~~~~~~~t  217 (325)
T 3kul_A          191 KVSDFGLSRVLEDDPDA-----------------------------------------------------AYTTTGGKIP  217 (325)
T ss_dssp             EECCCSSCEECC----C-----------------------------------------------------CEECC---CC
T ss_pred             EECCCCcccccccCccc-----------------------------------------------------eeeccCCCCc
Confidence            99999999876432100                                                     0011223468


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...  .+.....+..+.+||.+||..||.+
T Consensus       218 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  297 (325)
T 3kul_A          218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQ  297 (325)
T ss_dssp             GGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             ccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhh
Confidence            89999999999999999999999999999998 99999999888877776543  3444567899999999999999999


Q ss_pred             CCChHHHhc
Q 014344          325 RIGVEEIKG  333 (426)
Q Consensus       325 R~s~~eil~  333 (426)
                      |||+.+|++
T Consensus       298 Rps~~eil~  306 (325)
T 3kul_A          298 RPRFSQIVS  306 (325)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=6.3e-49  Score=376.14  Aligned_cols=269  Identities=25%  Similarity=0.367  Sum_probs=215.0

Q ss_pred             CCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344            8 RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus         8 ~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      .+.+.+..++|++++.||+|+||+||+|.+..+++.||+|++...             .....+.+.+|+.+|+.++|||
T Consensus         2 ~p~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~-------------~~~~~~~~~~E~~~l~~l~hp~   68 (310)
T 3s95_A            2 MPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF-------------DEETQRTFLKEVKVMRCLEHPN   68 (310)
T ss_dssp             CCCEEECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC-------------CHHHHHHHHHHHHHHTTCCCTT
T ss_pred             CcceeeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC-------------CHHHHHHHHHHHHHHHhCCCcC
Confidence            345667889999999999999999999999999999999988332             2234567889999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |+++++++.+++..|+|||||+|++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+
T Consensus        69 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~  147 (310)
T 3s95_A           69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNV  147 (310)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCE
T ss_pred             cccEEEEEecCCeeEEEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCE
Confidence            9999999999999999999999999999987643 459999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++..............                                          .............+||
T Consensus       148 kl~Dfg~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~gt  185 (310)
T 3s95_A          148 VVADFGLARLMVDEKTQPEGLR------------------------------------------SLKKPDRKKRYTVVGN  185 (310)
T ss_dssp             EECCCTTCEECC--------------------------------------------------------------CCCCSC
T ss_pred             EEeecccceecccccccccccc------------------------------------------cccccccccccccCCC
Confidence            9999999987643221100000                                          0000111233456899


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHhcCCCCCCCCCHHHHHHHHHHhccCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET-----FYRILCRPPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      +.|+|||++.+..++.++|||||||++|+|++|..||........     ..... ........+..+.+||.+||..||
T Consensus       186 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP  264 (310)
T 3s95_A          186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL-DRYCPPNCPPSFFPITVRCCDLDP  264 (310)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH-HHTCCTTCCTTHHHHHHHHTCSSG
T ss_pred             cceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc-cccCCCCCCHHHHHHHHHHccCCh
Confidence            999999999999999999999999999999999999875422110     00111 111234557889999999999999


Q ss_pred             CCCCChHHHhc
Q 014344          323 TKRIGVEEIKG  333 (426)
Q Consensus       323 ~~R~s~~eil~  333 (426)
                      ++|||+.++++
T Consensus       265 ~~Rps~~~l~~  275 (310)
T 3s95_A          265 EKRPSFVKLEH  275 (310)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999987

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=8.7e-49  Score=383.29  Aligned_cols=265  Identities=26%  Similarity=0.428  Sum_probs=208.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||.||+|.+.. ++.||||++.........  ..........+.+.+|+.+|+.++||||++++++
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~--~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   97 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRT--VNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI   97 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSC--EEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred             ccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccch--hhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence            3679999999999999999999855 899999998553321110  0011123345789999999999999999999999


Q ss_pred             ee-----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           95 LS-----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        95 ~~-----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +.     ....+|+|||||. |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  175 (362)
T 3pg1_A           98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI  175 (362)
T ss_dssp             EEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             EEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEE
Confidence            84     3457899999997 6888777643 345999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++......                                                         ......+||+.
T Consensus       176 ~Dfg~~~~~~~~---------------------------------------------------------~~~~~~~~t~~  198 (362)
T 3pg1_A          176 CDFNLAREDTAD---------------------------------------------------------ANKTHYVTHRW  198 (362)
T ss_dssp             CCTTC------------------------------------------------------------------------CGG
T ss_pred             EecCcccccccc---------------------------------------------------------cccceecccce
Confidence            999998754211                                                         11233468999


Q ss_pred             CccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCC------------------------
Q 014344          250 YVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP------------------------  301 (426)
Q Consensus       250 y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~------------------------  301 (426)
                      |+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+..   .+.                        
T Consensus       199 y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (362)
T 3pg1_A          199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP  278 (362)
T ss_dssp             GCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCC
T ss_pred             ecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCC
Confidence            999999987 6789999999999999999999999999887766655531   000                        


Q ss_pred             ------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          302 ------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       302 ------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                            .....++.+.+||.+||+.||.+|||+.|+++||||+.+.
T Consensus       279 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          279 ARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence                  0123467799999999999999999999999999998763

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=9.6e-49  Score=377.63  Aligned_cols=261  Identities=18%  Similarity=0.250  Sum_probs=210.9

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.++.++|++++.||+|+||+||+|++..+++.+|+|+..|....        .........+..|+.+++.++||||+
T Consensus         7 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~--------~~~~~~~~~~~~e~~~l~~l~h~~iv   78 (325)
T 3kex_A            7 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED--------KSGRQSFQAVTDHMLAIGSLDHAHIV   78 (325)
T ss_dssp             CCBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECC--------TTSCSCBCSCCHHHHHHHTCCCTTBC
T ss_pred             HhhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccc--------cccHHHHHHHHHHHHHHhcCCCCCcC
Confidence            3567788999999999999999999999988887444433221100        01112334566799999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++. +...++||||+.+|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        79 ~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl  156 (325)
T 3kex_A           79 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQV  156 (325)
T ss_dssp             CEEEEEC-BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEE
T ss_pred             eEEEEEc-CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEE
Confidence            9999986 566899999999999999887543 35999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.+.....                                                      ........||+.
T Consensus       157 ~Dfg~a~~~~~~~~------------------------------------------------------~~~~~~~~~~~~  182 (325)
T 3kex_A          157 ADFGVADLLPPDDK------------------------------------------------------QLLYSEAKTPIK  182 (325)
T ss_dssp             CSCSGGGGSCCCTT------------------------------------------------------CCC-----CCTT
T ss_pred             CCCCcccccCcccc------------------------------------------------------cccccCCCCccc
Confidence            99999987643211                                                      011233458889


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|+|++ |+.||.+....+....+...  .......+..+.+||.+||..||.+||
T Consensus       183 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  262 (325)
T 3kex_A          183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRP  262 (325)
T ss_dssp             TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSC
T ss_pred             ccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCc
Confidence            999999999999999999999999999999 99999988776666555433  233334577899999999999999999


Q ss_pred             ChHHHhcC
Q 014344          327 GVEEIKGH  334 (426)
Q Consensus       327 s~~eil~h  334 (426)
                      |+.++++|
T Consensus       263 s~~el~~~  270 (325)
T 3kex_A          263 TFKELANE  270 (325)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999886

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=9.1e-48  Score=379.17  Aligned_cols=260  Identities=20%  Similarity=0.306  Sum_probs=221.4

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCC-------CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHH
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVES-------SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR   81 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~   81 (426)
                      +.+++..++|++++.||+|+||+||+|++..+       +..||||++....            .......+.+|+.+++
T Consensus        62 ~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~  129 (382)
T 3tt0_A           62 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA------------TEKDLSDLISEMEMMK  129 (382)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC------------CHHHHHHHHHHHHHHH
T ss_pred             cccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc------------CHHHHHHHHHHHHHHH
Confidence            35567788999999999999999999997643       3579999985431            1234567889999999


Q ss_pred             hc-CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHHH
Q 014344           82 NV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--------------QMFSDDTIRFYAAELVLALEYLHN  146 (426)
Q Consensus        82 ~l-~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~--------------~~l~~~~~~~~~~qil~aL~~LH~  146 (426)
                      .+ +||||+++++++..++.+|+|||||+||+|.+++.....              ..+++..++.++.||+.||.|||+
T Consensus       130 ~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  209 (382)
T 3tt0_A          130 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS  209 (382)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh
Confidence            99 899999999999999999999999999999999886542              359999999999999999999999


Q ss_pred             CCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCC
Q 014344          147 MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIG  226 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (426)
                      +||+||||||+|||++.++.+||+|||++........                                           
T Consensus       210 ~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-------------------------------------------  246 (382)
T 3tt0_A          210 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-------------------------------------------  246 (382)
T ss_dssp             TTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCT-------------------------------------------
T ss_pred             CCEecCCCCcceEEEcCCCcEEEcccCcccccccccc-------------------------------------------
Confidence            9999999999999999999999999999986542110                                           


Q ss_pred             CCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCC
Q 014344          227 PDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDL  303 (426)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~  303 (426)
                                 ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...  ....
T Consensus       247 -----------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~  315 (382)
T 3tt0_A          247 -----------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP  315 (382)
T ss_dssp             -----------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred             -----------cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence                       011223357899999999999999999999999999999999 99999999888777766543  2334


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ...+..+.+||.+||+.||++|||+++|+++
T Consensus       316 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          316 SNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4668899999999999999999999999986

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=5.6e-49  Score=385.82  Aligned_cols=257  Identities=22%  Similarity=0.350  Sum_probs=208.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-----
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-----   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-----   84 (426)
                      ...+..++|++++.||+|+||+||+|++..+++.||||++.....              ....+..|+.+++.+.     
T Consensus        13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~~~   78 (373)
T 1q8y_A           13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV--------------YTEAAEDEIKLLQRVNDADNT   78 (373)
T ss_dssp             TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH--------------HHHHHHHHHHHHHHHHHTCCS
T ss_pred             CCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc--------------chhhhhHHHHHHHHhhccccc
Confidence            455677899999999999999999999999999999999854321              2345677899988886     


Q ss_pred             ------CCCcceeeeeeecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccC
Q 014344           85 ------HPLLPRLRGVLSTDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRD  153 (426)
Q Consensus        85 ------hp~iv~l~~~~~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrD  153 (426)
                            ||||+++++++....    .+++||||+ |++|.+++.......+++..++.++.||+.||+|||++ ||+|||
T Consensus        79 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~D  157 (373)
T 1q8y_A           79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTD  157 (373)
T ss_dssp             HHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSC
T ss_pred             chhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence                  899999999997654    899999999 89999998876666699999999999999999999998 999999


Q ss_pred             CCCCCeeecc------CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          154 LKPENIMIQE------NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       154 lKp~NiLl~~------~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      |||+|||++.      .+.+||+|||++.....                                               
T Consensus       158 ikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~-----------------------------------------------  190 (373)
T 1q8y_A          158 IKPENVLMEIVDSPENLIQIKIADLGNACWYDE-----------------------------------------------  190 (373)
T ss_dssp             CSGGGEEEEEEETTTTEEEEEECCCTTCEETTB-----------------------------------------------
T ss_pred             CChHHeEEeccCCCcCcceEEEcccccccccCC-----------------------------------------------
Confidence            9999999953      34899999999876531                                               


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHh---c
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR------KETFYRIL---C  298 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~------~~~~~~i~---~  298 (426)
                                  .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.      ......+.   .
T Consensus       191 ------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  258 (373)
T 1q8y_A          191 ------------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG  258 (373)
T ss_dssp             ------------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred             ------------CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcC
Confidence                        11233689999999999999999999999999999999999999986542      22222221   1


Q ss_pred             CCC----------------------------------------CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcC
Q 014344          299 RPP----------------------------------------DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK  338 (426)
Q Consensus       299 ~~~----------------------------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~  338 (426)
                      ..+                                        .....+..+.+||.+||+.||.+|||++|||+||||+
T Consensus       259 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  338 (373)
T 1q8y_A          259 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK  338 (373)
T ss_dssp             SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred             CCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhh
Confidence            110                                        0011245688999999999999999999999999998


Q ss_pred             CC
Q 014344          339 GV  340 (426)
Q Consensus       339 ~~  340 (426)
                      +.
T Consensus       339 ~~  340 (373)
T 1q8y_A          339 DT  340 (373)
T ss_dssp             TC
T ss_pred             cc
Confidence            64

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.2e-48  Score=375.88  Aligned_cols=263  Identities=22%  Similarity=0.327  Sum_probs=213.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~   93 (426)
                      .++|++++.||+|+||+||+|++..+++.||||++....               ....+..|+.+++.+ +||||+++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~E~~~l~~l~~h~~i~~~~~   72 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS---------------RAPQLHLEYRFYKQLGSGDGIPQVYY   72 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC---------------SSCCHHHHHHHHHHHCSCTTSCCEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc---------------chHHHHHHHHHHHHhhCCCCCCEEEE
Confidence            357999999999999999999999999999999984321               123577899999999 8999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc-----EE
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH-----IM  168 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~-----ik  168 (426)
                      ++...+..|+||||+ |++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.     +|
T Consensus        73 ~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~k  150 (330)
T 2izr_A           73 FGPCGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIH  150 (330)
T ss_dssp             EEEETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEE
T ss_pred             EEecCCccEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEE
Confidence            999999999999999 99999998765 346999999999999999999999999999999999999998887     99


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++..+.......                                                 ..........+||+
T Consensus       151 l~DFg~a~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~gt~  181 (330)
T 2izr_A          151 IIDFALAKEYIDPETKK-------------------------------------------------HIPYREHKSLTGTA  181 (330)
T ss_dssp             ECCCTTCEESBCTTTCC-------------------------------------------------BCCCCCCCCCCSCT
T ss_pred             EEEcccceeeecCCCCc-------------------------------------------------cccccccCCcCCCc
Confidence            99999998764221100                                                 00011234567999


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhc----CCC-C-CCCCCHHHHHHHHHHhc
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILC----RPP-D-LVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~----~~~-~-~~~~~~~~~~li~~~L~  319 (426)
                      .|+|||++.+..++.++|||||||++|+|++|+.||.+.+   ..+.+..+..    .+. . ....| .+.+||..||.
T Consensus       182 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~  260 (330)
T 2izr_A          182 RYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRR  260 (330)
T ss_dssp             TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHH
T ss_pred             cccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHh
Confidence            9999999999999999999999999999999999998743   3344444421    111 1 11234 89999999999


Q ss_pred             cCCCCCCChHHHhc----------CCCcCCCChhh
Q 014344          320 KDPTKRIGVEEIKG----------HEFFKGVNWEL  344 (426)
Q Consensus       320 ~dP~~R~s~~eil~----------hp~f~~~~~~~  344 (426)
                      .||.+||++++|++          ..+....+|+.
T Consensus       261 ~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~  295 (330)
T 2izr_A          261 LDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIG  295 (330)
T ss_dssp             CCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCC
Confidence            99999999988864          34445677873

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.1e-48  Score=381.87  Aligned_cols=258  Identities=21%  Similarity=0.339  Sum_probs=213.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEE-----EcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-C
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVK-----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-E   84 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~-----~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~   84 (426)
                      +++..++|++++.||+|+||.||+|+     +..+++.||||++....            .....+.+.+|+.+|+++ .
T Consensus        17 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~~   84 (359)
T 3vhe_A           17 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA------------THSEHRALMSELKILIHIGH   84 (359)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC------------CHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC------------CHHHHHHHHHHHHHHHhhcC
Confidence            45677899999999999999999999     55677899999985432            122356788999999999 7


Q ss_pred             CCCcceeeeeeecCC-eEEEEEeccCCCChHHHHHHhcc-----------------------------------------
Q 014344           85 HPLLPRLRGVLSTDK-FVGYAIDYCPGRDLHSLRKQQSE-----------------------------------------  122 (426)
Q Consensus        85 hp~iv~l~~~~~~~~-~~~lV~Ey~~gg~L~~l~~~~~~-----------------------------------------  122 (426)
                      ||||+++++++.... .+++|||||+||+|.+++.....                                         
T Consensus        85 hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (359)
T 3vhe_A           85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS  164 (359)
T ss_dssp             CTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred             CcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence            899999999987754 59999999999999999875432                                         


Q ss_pred             -----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCC
Q 014344          123 -----------------------QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       123 -----------------------~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                                             ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  244 (359)
T 3vhe_A          165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY  244 (359)
T ss_dssp             -------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred             cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence                                   128999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCC
Q 014344          180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK  259 (426)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  259 (426)
                      ....                                                      ........||+.|+|||++.+.
T Consensus       245 ~~~~------------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~  270 (359)
T 3vhe_A          245 KDPD------------------------------------------------------YVRKGDARLPLKWMAPETIFDR  270 (359)
T ss_dssp             SCTT------------------------------------------------------CEEC--CEECGGGCCHHHHHHC
T ss_pred             cccc------------------------------------------------------chhccccCCCceeEChhhhcCC
Confidence            2110                                                      1122344689999999999999


Q ss_pred             CCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          260 GHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC---RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       260 ~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .++.++|||||||++|+|++ |..||.+....+.....+.   ........++.+.+||.+||..||.+|||+.++++|
T Consensus       271 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          271 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            99999999999999999998 9999998765444433321   223334568899999999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=5.4e-48  Score=367.21  Aligned_cols=272  Identities=26%  Similarity=0.413  Sum_probs=208.5

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++....              .....+.+|+.+++.++||||+++++++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~   71 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--------------EKLSTILSEVMLLASLNHQYVVRYYAAW   71 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--------------HHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--------------HHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence            46999999999999999999999999999999985321              2346788899999999999999999988


Q ss_pred             ec-------------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec
Q 014344           96 ST-------------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ  162 (426)
Q Consensus        96 ~~-------------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~  162 (426)
                      .+             ...+|+|||||+|++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~  150 (303)
T 1zy4_A           72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID  150 (303)
T ss_dssp             EECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             HhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEc
Confidence            54             467899999999999999987643 3488899999999999999999999999999999999999


Q ss_pred             cCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          163 ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       163 ~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                      .++.+||+|||++.............                                          ............
T Consensus       151 ~~~~~kl~dfg~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~  188 (303)
T 1zy4_A          151 ESRNVKIGDFGLAKNVHRSLDILKLD------------------------------------------SQNLPGSSDNLT  188 (303)
T ss_dssp             TTSCEEECCCCCCSCTTC--------------------------------------------------------------
T ss_pred             CCCCEEEeeCcchhhcccccchhccc------------------------------------------cccccccccccc
Confidence            99999999999998764321100000                                          000000112334


Q ss_pred             ccccCCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCC----CC-CCCCCHHHHHHHH
Q 014344          243 SFVGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSS-RKETFYRILCRP----PD-LVGEPTPLRNLIR  315 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~----~~-~~~~~~~~~~li~  315 (426)
                      ..+||+.|+|||++.+. .++.++|||||||++|+|++   ||.... .......+....    +. ....+..+.+||.
T Consensus       189 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  265 (303)
T 1zy4_A          189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR  265 (303)
T ss_dssp             -----CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHH
T ss_pred             cCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHH
Confidence            56799999999999875 68999999999999999998   665432 233333433221    11 1234667899999


Q ss_pred             HHhccCCCCCCChHHHhcCCCcCCCChhhhhh
Q 014344          316 RLLEKDPTKRIGVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       316 ~~L~~dP~~R~s~~eil~hp~f~~~~~~~~~~  347 (426)
                      +||..||.+|||+.++++||||+...++...+
T Consensus       266 ~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~  297 (303)
T 1zy4_A          266 LLIDHDPNKRPGARTLLNSGWLPVKHQDEVIK  297 (303)
T ss_dssp             HHTCSSGGGSCCHHHHHHSSCSCCCCHHHHHH
T ss_pred             HHHhcCcccCcCHHHHhCCCCcCCCChHHHHH
Confidence            99999999999999999999999887776543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3.3e-48  Score=363.10  Aligned_cols=253  Identities=17%  Similarity=0.222  Sum_probs=216.3

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ..+..++|++++.||+|+||+||+|.+. ++..||+|++.....              ....+.+|+.+++.++||||++
T Consensus         3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~E~~~l~~l~h~~i~~   67 (268)
T 3sxs_A            3 MELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM--------------SEDEFFQEAQTMMKLSHPKLVK   67 (268)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB--------------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             eEechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC--------------cHHHHHHHHHHHHhCCCCCEee
Confidence            3577789999999999999999999875 567899999854321              2346788999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++.++...|+||||++|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        68 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~  146 (268)
T 3sxs_A           68 FYGVCSKEYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVS  146 (268)
T ss_dssp             EEEEECSSSSEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEEC
T ss_pred             EEEEEccCCceEEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEc
Confidence            9999999999999999999999999987653 349999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++........                                                       .......||+.|
T Consensus       147 Dfg~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~y  171 (268)
T 3sxs_A          147 DFGMTRYVLDDQY-------------------------------------------------------VSSVGTKFPVKW  171 (268)
T ss_dssp             CTTCEEECCTTCE-------------------------------------------------------EECCSCCCCGGG
T ss_pred             cCccceecchhhh-------------------------------------------------------hcccCCCcCccc
Confidence            9999876532110                                                       011223467889


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      +|||++.+..++.++|||||||++|+|++ |..||...+.......+....  ......+..+.+||.+||+.||++|||
T Consensus       172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  251 (268)
T 3sxs_A          172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPT  251 (268)
T ss_dssp             CCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCC
T ss_pred             CCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcC
Confidence            99999999899999999999999999998 999999998887777665443  223345788999999999999999999


Q ss_pred             hHHHhcC
Q 014344          328 VEEIKGH  334 (426)
Q Consensus       328 ~~eil~h  334 (426)
                      +.++++|
T Consensus       252 ~~~ll~~  258 (268)
T 3sxs_A          252 FQQLLSS  258 (268)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999976

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.8e-48  Score=365.60  Aligned_cols=254  Identities=20%  Similarity=0.244  Sum_probs=214.9

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.+..++|++++.||+|+||+||+|.+. ++..||+|++.....              ..+.+.+|+.+++.++||||+
T Consensus        18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~E~~~l~~l~h~~i~   82 (283)
T 3gen_A           18 SWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM--------------SEDEFIEEAKVMMNLSHEKLV   82 (283)
T ss_dssp             TTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB--------------CHHHHHHHHHHHHTCCCTTBC
T ss_pred             CccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC--------------CHHHHHHHHHHHhcCCCCCEe
Confidence            56678889999999999999999999875 677899999854321              224678899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.+.+.+|+|||||+|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl  161 (283)
T 3gen_A           83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV  161 (283)
T ss_dssp             CEEEEECSSSSEEEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEE
T ss_pred             eEEEEEecCCCeEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEE
Confidence            99999999999999999999999999987543 34999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                       ........||+.
T Consensus       162 ~Dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~  186 (283)
T 3gen_A          162 SDFGLSRYVLDDE-------------------------------------------------------YTSSVGSKFPVR  186 (283)
T ss_dssp             CSTTGGGGBCCHH-------------------------------------------------------HHSTTSTTSCGG
T ss_pred             ccccccccccccc-------------------------------------------------------cccccCCccCcc
Confidence            9999997653210                                                       001112247888


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+....  ......+..+.+||.+||+.||.+||
T Consensus       187 y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  266 (283)
T 3gen_A          187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERP  266 (283)
T ss_dssp             GCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred             cCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCc
Confidence            999999999999999999999999999998 999999998888777776442  23334578899999999999999999


Q ss_pred             ChHHHhcC
Q 014344          327 GVEEIKGH  334 (426)
Q Consensus       327 s~~eil~h  334 (426)
                      |++++++|
T Consensus       267 s~~~ll~~  274 (283)
T 3gen_A          267 TFKILLSN  274 (283)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999976

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.6e-48  Score=367.70  Aligned_cols=250  Identities=20%  Similarity=0.223  Sum_probs=211.8

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCc-------eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSE-------SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV   83 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~-------~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l   83 (426)
                      ..+..++|++.+.||+|+||+||+|++..+++       .||+|++.+..             ....+.+.+|+.+++.+
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-------------~~~~~~~~~E~~~l~~l   69 (289)
T 4fvq_A            3 HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-------------RNYSESFFEAASMMSKL   69 (289)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-------------GGGHHHHHHHHHHHHTS
T ss_pred             EEechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-------------HHHHHHHHHHHHHHHhC
Confidence            35667889999999999999999999988774       69999985432             12346788899999999


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      +||||+++++++.+++..|+|||||+|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus        70 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~  148 (289)
T 4fvq_A           70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIR  148 (289)
T ss_dssp             CCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEE
T ss_pred             CCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEec
Confidence            99999999999999999999999999999999987654 34899999999999999999999999999999999999998


Q ss_pred             CCc--------EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          164 NGH--------IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDS  235 (426)
Q Consensus       164 ~g~--------ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (426)
                      ++.        +||+|||++.....                                                       
T Consensus       149 ~~~~~~~~~~~~kl~Dfg~~~~~~~-------------------------------------------------------  173 (289)
T 4fvq_A          149 EEDRKTGNPPFIKLSDPGISITVLP-------------------------------------------------------  173 (289)
T ss_dssp             CCBGGGTBCCEEEECCCCSCTTTSC-------------------------------------------------------
T ss_pred             CCcccccccceeeeccCcccccccC-------------------------------------------------------
Confidence            887        99999999865421                                                       


Q ss_pred             CCCCCccccccCCCCccchhhcC-CCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHH
Q 014344          236 DSSEKSNSFVGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPPDLVGEPTPLRNL  313 (426)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  313 (426)
                           .....||+.|+|||++.+ ..++.++|||||||++|+|++ |.+||......................+..+.+|
T Consensus       174 -----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  248 (289)
T 4fvq_A          174 -----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANL  248 (289)
T ss_dssp             -----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHH
T ss_pred             -----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCCHHHHHH
Confidence                 123458899999999988 778999999999999999999 5566666665554444444444444557889999


Q ss_pred             HHHHhccCCCCCCChHHHhcC
Q 014344          314 IRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~h  334 (426)
                      |.+||+.||.+|||+.++++|
T Consensus       249 i~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          249 INNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999999976

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.1e-48  Score=383.06  Aligned_cols=257  Identities=21%  Similarity=0.282  Sum_probs=218.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.++.++|++++.||+|+||.||+|++..+++.||||++....            .......+.+|+.+|+.++||||+
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~hpniv  175 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL------------PPDLKAKFLQEARILKQYSHPNIV  175 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS------------CHHHHTTTTHHHHHHTTCCCTTBC
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC------------CHHHHHHHHHHHHHHHhCCCCCEE
Confidence            45678889999999999999999999999999999999985321            122345677899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++..++.+|+|||||+||+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus       176 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl  254 (377)
T 3cbl_A          176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKI  254 (377)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             EEEEEEecCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEE
Confidence            99999999999999999999999999987653 34899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.......                                                      ........+|+.
T Consensus       255 ~DfG~s~~~~~~~~------------------------------------------------------~~~~~~~~~~~~  280 (377)
T 3cbl_A          255 SDFGMSREEADGVY------------------------------------------------------AASGGLRQVPVK  280 (377)
T ss_dssp             CCGGGCEECTTSEE------------------------------------------------------ECCSSCCEEEGG
T ss_pred             CcCCCceecCCCce------------------------------------------------------eecCCCCCCCcC
Confidence            99999875432100                                                      000112236778


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+...  .+.....+..+.+||.+||+.||++||
T Consensus       281 y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  360 (377)
T 3cbl_A          281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRP  360 (377)
T ss_dssp             GSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCc
Confidence            999999998899999999999999999998 99999998887766555432  233445688999999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      |+++|++
T Consensus       361 s~~~i~~  367 (377)
T 3cbl_A          361 SFSTIYQ  367 (377)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=4.4e-48  Score=367.05  Aligned_cols=259  Identities=26%  Similarity=0.445  Sum_probs=211.8

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ...++|.....||+|+||.||+|.+..+++.||||++...             .....+.+.+|+.+++.++||||++++
T Consensus        19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-------------~~~~~~~~~~e~~~l~~l~h~~iv~~~   85 (295)
T 2clq_A           19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-------------DSRYSQPLHEEIALHKHLKHKNIVQYL   85 (295)
T ss_dssp             ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC-------------CC---HHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC-------------chHHHHHHHHHHHHHHhCCCCCEeeEe
Confidence            4455566666999999999999999999999999998532             122346788899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-CCcEEEe
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-NGHIMLV  170 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~-~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-~g~ikL~  170 (426)
                      +++...+.+++||||++|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~  165 (295)
T 2clq_A           86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS  165 (295)
T ss_dssp             EEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEEC
T ss_pred             eEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEe
Confidence            99999999999999999999999987653 234678999999999999999999999999999999999997 8999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++.......                                                        .......||+.|
T Consensus       166 Dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y  189 (295)
T 2clq_A          166 DFGTSKRLAGIN--------------------------------------------------------PCTETFTGTLQY  189 (295)
T ss_dssp             CTTTCEESCC-------------------------------------------------------------CCCCCCGGG
T ss_pred             ecccccccCCCC--------------------------------------------------------CcccccCCCccc
Confidence            999987653211                                                        012234689999


Q ss_pred             ccchhhcCCC--CChhhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH--hc-CCCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          251 VAPEIIEGKG--HDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-TFYRI--LC-RPPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       251 ~aPE~~~~~~--~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i--~~-~~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +|||++.+..  ++.++|||||||++|+|++|+.||....... .....  .. .+......+..+.+||.+||..||++
T Consensus       190 ~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  269 (295)
T 2clq_A          190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDK  269 (295)
T ss_dssp             CCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTT
T ss_pred             cChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhh
Confidence            9999997643  8899999999999999999999997654322 22211  12 22333456889999999999999999


Q ss_pred             CCChHHHhcCCCcCCC
Q 014344          325 RIGVEEIKGHEFFKGV  340 (426)
Q Consensus       325 R~s~~eil~hp~f~~~  340 (426)
                      |||+.++++||||+..
T Consensus       270 Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          270 RACANDLLVDEFLKVS  285 (295)
T ss_dssp             SCCHHHHHTSGGGCC-
T ss_pred             CCCHHHHhcChhhhhc
Confidence            9999999999999753

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.7e-48  Score=370.83  Aligned_cols=260  Identities=22%  Similarity=0.311  Sum_probs=220.3

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV   83 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l   83 (426)
                      +...+..++|++.+.||+|+||.||+|.+.     .+++.||+|++....            .....+.+.+|+.+|+.+
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l   83 (314)
T 2ivs_A           16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA------------SPSELRDLLSEFNVLKQV   83 (314)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC------------CHHHHHHHHHHHHHHTTC
T ss_pred             cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC------------CHHHHHHHHHHHHHHhhC
Confidence            456778889999999999999999999984     455889999985321            223456788999999999


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc----------------------CCCCHHHHHHHHHHHHHHH
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE----------------------QMFSDDTIRFYAAELVLAL  141 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~----------------------~~l~~~~~~~~~~qil~aL  141 (426)
                      +||||+++++++...+.+|+|||||+|++|.+++.....                      ..+++..+..++.||+.||
T Consensus        84 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  163 (314)
T 2ivs_A           84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGM  163 (314)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHH
T ss_pred             CCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999876432                      3489999999999999999


Q ss_pred             HHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCC
Q 014344          142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVH  221 (426)
Q Consensus       142 ~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (426)
                      .|||++||+||||||+|||++.++.+||+|||++........                                      
T Consensus       164 ~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------  205 (314)
T 2ivs_A          164 QYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--------------------------------------  205 (314)
T ss_dssp             HHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC--------------------------------------
T ss_pred             HHHHHCCCcccccchheEEEcCCCCEEEcccccccccccccc--------------------------------------
Confidence            999999999999999999999999999999999876532110                                      


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-
Q 014344          222 SPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR-  299 (426)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~-  299 (426)
                                      ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.........+... 
T Consensus       206 ----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  269 (314)
T 2ivs_A          206 ----------------YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH  269 (314)
T ss_dssp             ----------------EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred             ----------------ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC
Confidence                            001223357889999999999999999999999999999999 99999988877666655433 


Q ss_pred             -CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          300 -PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       300 -~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                       .......+..+.+||.+||+.||.+|||+.+++++
T Consensus       270 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          270 RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             23344668899999999999999999999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=5.7e-48  Score=365.15  Aligned_cols=255  Identities=22%  Similarity=0.308  Sum_probs=222.1

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.+..++|++.+.||+|+||+||+|.+..+++.||+|++...              ....+.+.+|+.+++.++||||+
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------------~~~~~~~~~E~~~l~~l~h~~i~   72 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--------------TMEVEEFLKEAAVMKEIKHPNLV   72 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC--------------STHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC--------------HHHHHHHHHHHHHHHhCCCCCEe
Confidence            5677888999999999999999999999999999999998432              12356788899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.++..+|+||||++|++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        73 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l  152 (288)
T 3kfa_A           73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKV  152 (288)
T ss_dssp             CEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEE
T ss_pred             eEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEE
Confidence            99999999999999999999999999998766677999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                       ........||+.
T Consensus       153 ~Dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~  177 (288)
T 3kfa_A          153 ADFGLSRLMTGDT-------------------------------------------------------YTAHAGAKFPIK  177 (288)
T ss_dssp             CCCCGGGTSCSSS-------------------------------------------------------SEEETTEEECGG
T ss_pred             ccCccceeccCCc-------------------------------------------------------cccccCCccccC
Confidence            9999997653211                                                       011223357889


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|+|++ |..||.+.+.......+...  .......+..+.+||.+||..||.+||
T Consensus       178 y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  257 (288)
T 3kfa_A          178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP  257 (288)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCc
Confidence            999999999999999999999999999999 99999988876665555433  333446688999999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      |++++++
T Consensus       258 s~~~~~~  264 (288)
T 3kfa_A          258 SFAEIHQ  264 (288)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999976

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.2e-48  Score=378.82  Aligned_cols=251  Identities=23%  Similarity=0.373  Sum_probs=185.3

Q ss_pred             CCCCcEEEe-eecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           14 DFSCLRIVS-ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~-~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      -.++|++++ .||+|+||+||+|++..+++.||||++.....                 ........++.+.||||++++
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------------~~~e~~~~~~~~~h~~i~~~~   88 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-----------------ARQEVDHHWQASGGPHIVCIL   88 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-----------------HHHHHHHHHHHTTSTTBCCEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-----------------HHHHHHHHHHhcCCCChHHHH
Confidence            346799976 59999999999999999999999999854211                 111223346677999999999


Q ss_pred             eeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---CC
Q 014344           93 GVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---NG  165 (426)
Q Consensus        93 ~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~g  165 (426)
                      +++..    ...+|+|||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++
T Consensus        89 ~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~  168 (336)
T 3fhr_A           89 DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA  168 (336)
T ss_dssp             EEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTC
T ss_pred             HHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCc
Confidence            99976    556899999999999999988766567999999999999999999999999999999999999986   45


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++......                                                          .....+
T Consensus       169 ~~kl~Dfg~~~~~~~~----------------------------------------------------------~~~~~~  190 (336)
T 3fhr_A          169 VLKLTDFGFAKETTQN----------------------------------------------------------ALQTPC  190 (336)
T ss_dssp             CEEECCCTTCEEC-------------------------------------------------------------------
T ss_pred             eEEEeccccceecccc----------------------------------------------------------ccccCC
Confidence            6999999998754311                                                          122346


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHh-----cCCCCCCCCCHHHHHHHHH
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY----RIL-----CRPPDLVGEPTPLRNLIRR  316 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~----~i~-----~~~~~~~~~~~~~~~li~~  316 (426)
                      ||+.|+|||++.+..++.++|||||||++|+|++|+.||..........    .+.     ...+.....+..+.+||.+
T Consensus       191 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  270 (336)
T 3fhr_A          191 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRL  270 (336)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHH
T ss_pred             CCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHH
Confidence            8999999999998889999999999999999999999998766543311    111     1112234568899999999


Q ss_pred             HhccCCCCCCChHHHhcCCCcCC
Q 014344          317 LLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ||..||.+|||++|+++||||++
T Consensus       271 ~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          271 LLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             HSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HCCCChhHCcCHHHHhcCccccc
Confidence            99999999999999999999975

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=3.1e-48  Score=373.00  Aligned_cols=268  Identities=21%  Similarity=0.248  Sum_probs=223.7

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      .+.+..++|++.+.||+|+||.||+|.+.     .+++.||||++....            .......+.+|+.+++.++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~   86 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA------------SMRERIEFLNEASVMKEFN   86 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS------------CHHHHHHHHHHHHHGGGCC
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc------------CHHHHHHHHHHHHHHHhcC
Confidence            44566788999999999999999999886     467889999985321            1123456888999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--------QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKP  156 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~--------~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp  156 (426)
                      ||||+++++++.+.+..|+|||||+|++|.+++.....        ..+++..+..++.||+.||.|||++||+||||||
T Consensus        87 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp  166 (322)
T 1p4o_A           87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAA  166 (322)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSG
T ss_pred             CCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCcc
Confidence            99999999999999999999999999999998875421        3578999999999999999999999999999999


Q ss_pred             CCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          157 ENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD  236 (426)
Q Consensus       157 ~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (426)
                      +|||++.++.+||+|||++.......                                                      
T Consensus       167 ~NIli~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------------  192 (322)
T 1p4o_A          167 RNCMVAEDFTVKIGDFGMTRDIYETD------------------------------------------------------  192 (322)
T ss_dssp             GGEEECTTCCEEECCTTCCCGGGGGG------------------------------------------------------
T ss_pred             ceEEEcCCCeEEECcCcccccccccc------------------------------------------------------
Confidence            99999999999999999987543110                                                      


Q ss_pred             CCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHH
Q 014344          237 SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNL  313 (426)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~l  313 (426)
                      .........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+....  ......+..+.+|
T Consensus       193 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  272 (322)
T 1p4o_A          193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL  272 (322)
T ss_dssp             CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHH
Confidence            0011223457899999999999999999999999999999999 899999988887777665432  3344668899999


Q ss_pred             HHHHhccCCCCCCChHHHhcC------CCcCCCChh
Q 014344          314 IRRLLEKDPTKRIGVEEIKGH------EFFKGVNWE  343 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~h------p~f~~~~~~  343 (426)
                      |.+||..||.+|||+.++++|      ++|+.++|.
T Consensus       273 i~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~~  308 (322)
T 1p4o_A          273 MRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFY  308 (322)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCST
T ss_pred             HHHHcCCCcccCcCHHHHHHHHHHhhccCCcccccc
Confidence            999999999999999999876      666554443

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.5e-47  Score=363.87  Aligned_cols=256  Identities=20%  Similarity=0.274  Sum_probs=210.9

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcce
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPR   90 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~   90 (426)
                      .+..++|++++.||+|+||+||+|++..+++.||||++....               ....+.+|+.+++.+ .|++++.
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~e~~~~~~l~~~~~i~~   70 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---------------DAPQLRDEYRTYKLLAGCTGIPN   70 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---------------TSCCHHHHHHHHHHTTTCTTCCC
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---------------ccHHHHHHHHHHHHHhcCCCCCe
Confidence            344567999999999999999999999999999999984321               223577799999999 7999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc----
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH----  166 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~----  166 (426)
                      +++++......|+||||+ |++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.    
T Consensus        71 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~  148 (298)
T 1csn_A           71 VYYFGQEGLHNVLVIDLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN  148 (298)
T ss_dssp             EEEEEEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTT
T ss_pred             EEeecCCCceeEEEEEec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCC
Confidence            999999999999999999 999999987653 45999999999999999999999999999999999999987776    


Q ss_pred             -EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          167 -IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       167 -ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                       +||+|||++..........                                                 ..........+
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~  179 (298)
T 1csn_A          149 MIYVVDFGMVKFYRDPVTKQ-------------------------------------------------HIPYREKKNLS  179 (298)
T ss_dssp             CEEECCCTTCEESBCTTTCC-------------------------------------------------BCCCCCCCCCC
T ss_pred             eEEEEECccccccccccccc-------------------------------------------------cccccCccCCC
Confidence             9999999998764321100                                                 00011234567


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHhcC---C---CCCCCCCHHHHHHHHH
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCR---P---PDLVGEPTPLRNLIRR  316 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~---~~~~~~~~i~~~---~---~~~~~~~~~~~~li~~  316 (426)
                      ||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.   .....+..+...   .   ......+..+.+||.+
T Consensus       180 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  259 (298)
T 1csn_A          180 GTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHY  259 (298)
T ss_dssp             SCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHH
T ss_pred             CCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHH
Confidence            999999999999999999999999999999999999999874   333444333211   1   1123568899999999


Q ss_pred             HhccCCCCCCChHHHhc
Q 014344          317 LLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~  333 (426)
                      ||+.||++||++++|++
T Consensus       260 ~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          260 ARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHCCTTCCCCHHHHHH
T ss_pred             HhcCCcccCCCHHHHHH
Confidence            99999999999999865

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=6.6e-48  Score=373.85  Aligned_cols=257  Identities=23%  Similarity=0.299  Sum_probs=218.1

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      .+..++|++++.||+|+||.||+|++.     .+++.||||++....            .......+.+|+.+++.++||
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~hp  110 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA------------SADMQADFQREAALMAEFDNP  110 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC------------CHHHHHHHHHHHHHHHTCCCT
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc------------CHHHHHHHHHHHHHHHhCCCC
Confidence            456789999999999999999999997     455899999985431            123456788999999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc----------------------cCCCCHHHHHHHHHHHHHHHHHH
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS----------------------EQMFSDDTIRFYAAELVLALEYL  144 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~----------------------~~~l~~~~~~~~~~qil~aL~~L  144 (426)
                      ||+++++++.+.+.+|+|||||+|++|.+++....                      ...+++..++.++.||+.||.||
T Consensus       111 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L  190 (343)
T 1luf_A          111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  190 (343)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999987642                      14699999999999999999999


Q ss_pred             HHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCC
Q 014344          145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPR  224 (426)
Q Consensus       145 H~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (426)
                      |++||+||||||+|||++.++.+||+|||++........                                         
T Consensus       191 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-----------------------------------------  229 (343)
T 1luf_A          191 SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY-----------------------------------------  229 (343)
T ss_dssp             HHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-----------------------------------------
T ss_pred             HhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCcc-----------------------------------------
Confidence            999999999999999999999999999999876532100                                         


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--C
Q 014344          225 IGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--P  301 (426)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~  301 (426)
                                   ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+....  .
T Consensus       230 -------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  296 (343)
T 1luf_A          230 -------------YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA  296 (343)
T ss_dssp             -------------BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred             -------------ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCC
Confidence                         011223458999999999999999999999999999999998 999999998888777765433  2


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       302 ~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .....+..+.+||.+||+.||.+|||+.+++++
T Consensus       297 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          297 CPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            334568899999999999999999999999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=5.8e-48  Score=361.33  Aligned_cols=250  Identities=20%  Similarity=0.286  Sum_probs=214.9

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+++++|++++.||+|+||+||+|++.  ++.||+|++.....           .....+.+.+|+.+++.++||||+
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~h~~iv   70 (271)
T 3kmu_A            4 HSGIDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDW-----------STRKSRDFNEECPRLRIFSHPNVL   70 (271)
T ss_dssp             CCCCCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTC-----------CHHHHHHHHHHGGGGCCCSCTTEE
T ss_pred             cCCCCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEeccccc-----------CHHHHHHHHHHHHHHHhcCCCchh
Confidence            35788999999999999999999999974  88999999854321           223456788999999999999999


Q ss_pred             eeeeeeecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeeeccCC
Q 014344           90 RLRGVLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQENG  165 (426)
Q Consensus        90 ~l~~~~~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiLl~~~g  165 (426)
                      ++++++.+.  ...++||||++||+|.+++.......+++..+..++.||+.||.|||++|  |+||||||+|||++.++
T Consensus        71 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~  150 (271)
T 3kmu_A           71 PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM  150 (271)
T ss_dssp             CEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTS
T ss_pred             heEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCc
Confidence            999999877  78999999999999999998765556999999999999999999999999  99999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .++|+|||++....                                                             ....+
T Consensus       151 ~~~l~~~~~~~~~~-------------------------------------------------------------~~~~~  169 (271)
T 3kmu_A          151 TARISMADVKFSFQ-------------------------------------------------------------SPGRM  169 (271)
T ss_dssp             CEEEEGGGSCCTTS-------------------------------------------------------------CTTCB
T ss_pred             ceeEEeccceeeec-------------------------------------------------------------ccCcc
Confidence            99999999865431                                                             12235


Q ss_pred             cCCCCccchhhcCCCCC---hhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHhc
Q 014344          246 GTEEYVAPEIIEGKGHD---FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~---~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~li~~~L~  319 (426)
                      ||+.|+|||++.+..++   .++|||||||++|+|++|+.||.+.+.......+...   +......+..+.+||.+||+
T Consensus       170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  249 (271)
T 3kmu_A          170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMN  249 (271)
T ss_dssp             SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            89999999999876554   4899999999999999999999998888776666532   23334568899999999999


Q ss_pred             cCCCCCCChHHHhc
Q 014344          320 KDPTKRIGVEEIKG  333 (426)
Q Consensus       320 ~dP~~R~s~~eil~  333 (426)
                      .||.+|||++++++
T Consensus       250 ~~p~~Rps~~~il~  263 (271)
T 3kmu_A          250 EDPAKRPKFDMIVP  263 (271)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999986

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=7.9e-48  Score=363.34  Aligned_cols=257  Identities=25%  Similarity=0.345  Sum_probs=207.0

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCC---CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVES---SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      +...+..++|++++.||+|+||+||+|++..+   +..||+|++....            .....+.+.+|+.+++.++|
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~e~~~l~~l~h   75 (281)
T 1mp8_A            8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT------------SDSVREKFLQEALTMRQFDH   75 (281)
T ss_dssp             -CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT------------SHHHHHHHHHHHHHHHTCCC
T ss_pred             cceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC------------CHHHHHHHHHHHHHHHhCCC
Confidence            34567788999999999999999999998754   4569999974321            12345678899999999999


Q ss_pred             CCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      |||+++++++ .++..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus        76 ~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  153 (281)
T 1mp8_A           76 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND  153 (281)
T ss_dssp             TTBCCEEEEE-CSSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             CccceEEEEE-ccCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCC
Confidence            9999999998 4567899999999999999987653 4599999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++........                                                       .......
T Consensus       154 ~~kl~Dfg~~~~~~~~~~-------------------------------------------------------~~~~~~~  178 (281)
T 1mp8_A          154 CVKLGDFGLSRYMEDSTY-------------------------------------------------------YKASKGK  178 (281)
T ss_dssp             EEEECC--------------------------------------------------------------------------
T ss_pred             CEEECccccccccCcccc-------------------------------------------------------cccccCC
Confidence            999999999976532110                                                       0112234


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      +|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+...  .+.....+..+.+||.+||..||
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p  258 (281)
T 1mp8_A          179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP  258 (281)
T ss_dssp             CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             CcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            7889999999999999999999999999999996 99999988877776666543  23445678999999999999999


Q ss_pred             CCCCChHHHhcC
Q 014344          323 TKRIGVEEIKGH  334 (426)
Q Consensus       323 ~~R~s~~eil~h  334 (426)
                      .+|||+.+++++
T Consensus       259 ~~Rps~~~l~~~  270 (281)
T 1mp8_A          259 SRRPRFTELKAQ  270 (281)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.3e-48  Score=374.27  Aligned_cols=261  Identities=24%  Similarity=0.315  Sum_probs=215.8

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--CCCcc
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--HPLLP   89 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~iv   89 (426)
                      ..-.++|++++.||+|+||+||+|++..+++.||||++.........       .......+..|+.+++.+.  ||||+
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~~~~~~i~  111 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG-------ELPNGTRVPMEVVLLKKVSSGFSGVI  111 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEE-------ECTTCCEEEHHHHHHHHHCSSSCSBC
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhh-------hhhhhhHHHHHHHHHHhhccCCCCce
Confidence            34456799999999999999999999999999999999665432110       0012245667999999996  59999


Q ss_pred             eeeeeeecCCeEEEEEeccCC-CChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec-cCCcE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPG-RDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ-ENGHI  167 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~g-g~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~-~~g~i  167 (426)
                      ++++++..++..++||||+.+ ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+
T Consensus       112 ~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~  189 (320)
T 3a99_A          112 RLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL  189 (320)
T ss_dssp             CEEEEEECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEE
T ss_pred             EEEEEEecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCE
Confidence            999999999999999999986 8999988764  3499999999999999999999999999999999999999 78999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++......                                                          ......||
T Consensus       190 kL~Dfg~~~~~~~~----------------------------------------------------------~~~~~~gt  211 (320)
T 3a99_A          190 KLIDFGSGALLKDT----------------------------------------------------------VYTDFDGT  211 (320)
T ss_dssp             EECCCTTCEECCSS----------------------------------------------------------CBCCCCSC
T ss_pred             EEeeCccccccccc----------------------------------------------------------cccCCCCC
Confidence            99999998765321                                                          12234599


Q ss_pred             CCCccchhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          248 EEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       248 ~~y~aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      +.|+|||++.+..+ +.++|||||||++|+|++|+.||.....  ..   ..........+..+.+||.+||..||.+||
T Consensus       212 ~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  286 (320)
T 3a99_A          212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--II---RGQVFFRQRVSSECQHLIRWCLALRPSDRP  286 (320)
T ss_dssp             GGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HH---HCCCCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hh---cccccccccCCHHHHHHHHHHccCChhhCc
Confidence            99999999987766 7899999999999999999999976422  11   122223345688999999999999999999


Q ss_pred             ChHHHhcCCCcCCCChhh
Q 014344          327 GVEEIKGHEFFKGVNWEL  344 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~  344 (426)
                      |+++|++||||++..+..
T Consensus       287 s~~~ll~hp~~~~~~~~~  304 (320)
T 3a99_A          287 TFEEIQNHPWMQDVLLPQ  304 (320)
T ss_dssp             CHHHHHTSGGGSSCCCHH
T ss_pred             CHHHHhcCHhhcCccCcc
Confidence            999999999999876543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=7.7e-48  Score=365.85  Aligned_cols=257  Identities=19%  Similarity=0.309  Sum_probs=207.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEE----EcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVK----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~----~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      ...+..++|++++.||+|+||+||+|+    +..+++.||||++...             .....+.+.+|+.+|+.++|
T Consensus         4 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-------------~~~~~~~~~~E~~~l~~l~h   70 (295)
T 3ugc_A            4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------------TEEHLRDFEREIEILKSLQH   70 (295)
T ss_dssp             --CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC-------------CHHHHHHHHHHHHHHHTCCC
T ss_pred             cCcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC-------------CHHHHHHHHHHHHHHHhCCC
Confidence            356777889999999999999999998    5678999999998432             22345678899999999999


Q ss_pred             CCcceeeeeeec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           86 PLLPRLRGVLST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        86 p~iv~l~~~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      |||+++++++..  ...+|+|||||+|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus        71 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~  149 (295)
T 3ugc_A           71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN  149 (295)
T ss_dssp             TTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE
T ss_pred             CCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcC
Confidence            999999999854  466899999999999999987654 34999999999999999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++.+||+|||++.........                                                     ......
T Consensus       150 ~~~~kl~Dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~  176 (295)
T 3ugc_A          150 ENRVKIGDFGLTKVLPQDKEF-----------------------------------------------------FKVKEP  176 (295)
T ss_dssp             TTEEEECCCCSCC------------------------------------------------------------------C
T ss_pred             CCeEEEccCcccccccCCcce-----------------------------------------------------eeeccC
Confidence            999999999999865422100                                                     011223


Q ss_pred             cccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHh--cCCCCCCC
Q 014344          244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK----------------ETFYRIL--CRPPDLVG  305 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----------------~~~~~i~--~~~~~~~~  305 (426)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|..||......                .....+.  ...+....
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (295)
T 3ugc_A          177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG  256 (295)
T ss_dssp             TTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTT
T ss_pred             CCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcC
Confidence            34788899999999999999999999999999999999998654321                1111111  22334456


Q ss_pred             CCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          306 EPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       306 ~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .+..+.+||.+||..||++|||+.|+++
T Consensus       257 ~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          257 CPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            7899999999999999999999999985

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.2e-47  Score=359.86  Aligned_cols=251  Identities=26%  Similarity=0.432  Sum_probs=204.7

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .++.++|++.+.||+|+||+||+|.+.  ++.||+|++.......         .....+.+.+|+.+++.++||||+++
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~---------~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDED---------ISQTIENVRQEAKLFAMLKHPNIIAL   71 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC-------------------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCccc---------HHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            467889999999999999999999974  8899999985532211         11235678889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCCCCeeecc-----
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG---IVYRDLKPENIMIQE-----  163 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g---iiHrDlKp~NiLl~~-----  163 (426)
                      ++++.+++..|+||||++|++|.+++.   .+.+++..+..++.||+.||.|||++|   |+||||||+|||++.     
T Consensus        72 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~  148 (271)
T 3dtc_A           72 RGVCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENG  148 (271)
T ss_dssp             EEEECCC--CEEEEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSS
T ss_pred             EEEEecCCceEEEEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccc
Confidence            999999999999999999999998875   345999999999999999999999999   999999999999986     


Q ss_pred             ---CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          164 ---NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       164 ---~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                         ++.+||+|||++......                                                          .
T Consensus       149 ~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------------------~  170 (271)
T 3dtc_A          149 DLSNKILKITDFGLAREWHRT----------------------------------------------------------T  170 (271)
T ss_dssp             CCSSCCEEECCCCC------------------------------------------------------------------
T ss_pred             cccCcceEEccCCcccccccc----------------------------------------------------------c
Confidence               778999999998755321                                                          1


Q ss_pred             ccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---CCCCCCCHHHHHHHHHH
Q 014344          241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---PDLVGEPTPLRNLIRRL  317 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~li~~~  317 (426)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....   +.....+..+.+||.+|
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  250 (271)
T 3dtc_A          171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDC  250 (271)
T ss_dssp             -----CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHH
Confidence            123358999999999999999999999999999999999999999988877766655332   23345688899999999


Q ss_pred             hccCCCCCCChHHHhcC
Q 014344          318 LEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       318 L~~dP~~R~s~~eil~h  334 (426)
                      |..||.+|||+.|+++|
T Consensus       251 l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          251 WNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             hcCCcccCcCHHHHHHH
Confidence            99999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.8e-48  Score=373.11  Aligned_cols=257  Identities=20%  Similarity=0.268  Sum_probs=208.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceE----EEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESF----ALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~v----AiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      ...+..++|++++.||+|+||+||+|++..+++.+    |+|.+....            .....+.+.+|+.++++++|
T Consensus         9 ~~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~h   76 (327)
T 3poz_A            9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT------------SPKANKEILDEAYVMASVDN   76 (327)
T ss_dssp             SEECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------------------CHHHHHHHHHHHHHCCB
T ss_pred             HhhcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc------------CHHHHHHHHHHHHHHHhCCC
Confidence            45577889999999999999999999998888766    555553211            12234678899999999999


Q ss_pred             CCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      |||+++++++.+.. .++|+||+.+|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus        77 ~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~  154 (327)
T 3poz_A           77 PHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ  154 (327)
T ss_dssp             TTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT
T ss_pred             CCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCC
Confidence            99999999998755 789999999999999987654 4599999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||+++.+.....                                                      ........
T Consensus       155 ~~kl~Dfg~a~~~~~~~~------------------------------------------------------~~~~~~~~  180 (327)
T 3poz_A          155 HVKITDFGLAKLLGAEEK------------------------------------------------------EYHAEGGK  180 (327)
T ss_dssp             EEEECCTTHHHHHTTTCC-------------------------------------------------------------C
T ss_pred             CEEEccCcceeEccCCcc------------------------------------------------------cccccCCC
Confidence            999999999987642210                                                      01122334


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      ||+.|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....+...  .+.....+..+.+||.+||+.||
T Consensus       181 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  260 (327)
T 3poz_A          181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA  260 (327)
T ss_dssp             CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCG
T ss_pred             ccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCh
Confidence            7889999999999999999999999999999999 99999988776655554432  33445568899999999999999


Q ss_pred             CCCCChHHHhcC
Q 014344          323 TKRIGVEEIKGH  334 (426)
Q Consensus       323 ~~R~s~~eil~h  334 (426)
                      .+|||+.+++.+
T Consensus       261 ~~Rps~~ell~~  272 (327)
T 3poz_A          261 DSRPKFRELIIE  272 (327)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCCCHHHHHHH
Confidence            999999999875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.3e-47  Score=367.78  Aligned_cols=259  Identities=26%  Similarity=0.423  Sum_probs=199.6

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ....+++|++++.||+|+||.||+|++..+++.||||++.......           ...+.+..+..+++.++||||++
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~~~~~~~~~~~~h~~i~~   88 (318)
T 2dyl_A           20 YQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE-----------ENKRILMDLDVVLKSHDCPYIVQ   88 (318)
T ss_dssp             EECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHH-----------HHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             hhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccch-----------HHHHHHHHHHHHHHhcCCCceee
Confidence            3467789999999999999999999999999999999996542111           12234444556788889999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeeccCCcEEE
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      +++++..++.+|+||||+ ++.+..+.... ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||
T Consensus        89 ~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl  166 (318)
T 2dyl_A           89 CFGTFITNTDVFIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL  166 (318)
T ss_dssp             EEEEEECSSEEEEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEE
T ss_pred             EEEEEecCCcEEEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEE
Confidence            999999999999999999 56666665443 35599999999999999999999995 9999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                         ......||+.
T Consensus       167 ~dfg~~~~~~~~~---------------------------------------------------------~~~~~~~~~~  189 (318)
T 2dyl_A          167 CDFGISGRLVDDK---------------------------------------------------------AKDRSAGCAA  189 (318)
T ss_dssp             CCCTTC-----------------------------------------------------------------------CCT
T ss_pred             EECCCchhccCCc---------------------------------------------------------cccccCCCcc
Confidence            9999987653211                                                         1123358999


Q ss_pred             Cccchhhc-----CCCCChhhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCCCC----CCCCCHHHHHHHHHHhc
Q 014344          250 YVAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRILCRPPD----LVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       250 y~aPE~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~----~~~~~~~~~~li~~~L~  319 (426)
                      |+|||++.     +..++.++|||||||++|+|++|+.||... ...+.+..+......    ....+..+.+||.+||.
T Consensus       190 y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  269 (318)
T 2dyl_A          190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLT  269 (318)
T ss_dssp             TCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTC
T ss_pred             ccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHcc
Confidence            99999994     556889999999999999999999999874 445555555543322    22468899999999999


Q ss_pred             cCCCCCCChHHHhcCCCcCC
Q 014344          320 KDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       320 ~dP~~R~s~~eil~hp~f~~  339 (426)
                      .||.+|||+++|++||||+.
T Consensus       270 ~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          270 KDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             SCTTTSCCHHHHTTSHHHHH
T ss_pred             CChhHCcCHHHHhhCHHHHh
Confidence            99999999999999999974

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.3e-48  Score=374.44  Aligned_cols=259  Identities=18%  Similarity=0.288  Sum_probs=215.1

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-   83 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-   83 (426)
                      .+.+..++|++++.||+|+||+||+|++.     .++..||||++....            .......+.+|+.+|+++ 
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~  106 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA------------DSSEREALMSELKMMTQLG  106 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------CHHHHHHHHHHHHHC
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc------------CHHHHHHHHHHHHHHHhhc
Confidence            45677789999999999999999999973     456789999985432            112346788999999999 


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc---------------------CCCCHHHHHHHHHHHHHHHH
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE---------------------QMFSDDTIRFYAAELVLALE  142 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~---------------------~~l~~~~~~~~~~qil~aL~  142 (426)
                      +||||+++++++...+.+|+|||||+||+|.+++.....                     ..+++..+..++.||+.||.
T Consensus       107 ~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~  186 (344)
T 1rjb_A          107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGME  186 (344)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999876432                     23789999999999999999


Q ss_pred             HHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCC
Q 014344          143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHS  222 (426)
Q Consensus       143 ~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (426)
                      |||++||+||||||+|||++.++.+||+|||++........                                       
T Consensus       187 ~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------  227 (344)
T 1rjb_A          187 FLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN---------------------------------------  227 (344)
T ss_dssp             HHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT---------------------------------------
T ss_pred             HHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc---------------------------------------
Confidence            99999999999999999999999999999999976532110                                       


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--
Q 014344          223 PRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--  299 (426)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--  299 (426)
                                     ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+......+..++..  
T Consensus       228 ---------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~  292 (344)
T 1rjb_A          228 ---------------YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF  292 (344)
T ss_dssp             ---------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC
T ss_pred             ---------------ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCC
Confidence                           011223458899999999999999999999999999999998 99999987765555554432  


Q ss_pred             -CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          300 -PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       300 -~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                       .......+..+.+||.+||..||.+|||+.++++|
T Consensus       293 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          293 KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence             23334568899999999999999999999999986

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.3e-47  Score=366.81  Aligned_cols=259  Identities=20%  Similarity=0.311  Sum_probs=217.2

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEE-----cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKD-----VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-   83 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-   83 (426)
                      .+.+..++|++++.||+|+||+||+|++     ..+++.||+|++....            .....+.+.+|+.+|+++ 
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~   84 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA------------HLTEREALMSELKVLSYLG   84 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC------------CHHHHHHHHHHHHHHHHHC
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch------------hHHHHHHHHHHHHHHhhcc
Confidence            4557778999999999999999999985     4577899999985432            112346788999999999 


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccC----------------CCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ----------------MFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~----------------~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      +||||+++++++..++..++|||||++|+|.+++......                .+++..+..++.||+.||.|||++
T Consensus        85 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  164 (313)
T 1t46_A           85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (313)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            8999999999999999999999999999999998765422                489999999999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      ||+||||||+|||++.++.+||+|||++........                                            
T Consensus       165 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------  200 (313)
T 1t46_A          165 NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--------------------------------------------  200 (313)
T ss_dssp             TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT--------------------------------------------
T ss_pred             CeecCCCccceEEEcCCCCEEEcccccccccccccc--------------------------------------------
Confidence            999999999999999999999999999986642210                                            


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc---CCCCC
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC---RPPDL  303 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~---~~~~~  303 (426)
                                ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||.+..........+.   .....
T Consensus       201 ----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~  270 (313)
T 1t46_A          201 ----------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP  270 (313)
T ss_dssp             ----------SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCC
T ss_pred             ----------ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCc
Confidence                      011223457889999999999999999999999999999998 9999988765544444332   22333


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ...+..+.+||.+||..||.+|||+.+++++
T Consensus       271 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          271 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            4568899999999999999999999999875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2.5e-48  Score=374.80  Aligned_cols=263  Identities=24%  Similarity=0.374  Sum_probs=194.6

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHH-HHHhcCCCC
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR-VLRNVEHPL   87 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-il~~l~hp~   87 (426)
                      ..+.+..++|++++.||+|+||.||+|.+..+++.||||++.....            ......+..|+. +++.++|||
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~e~~~~~~~~~h~n   82 (327)
T 3aln_A           15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD------------EKEQKQLLMDLDVVMRSSDCPY   82 (327)
T ss_dssp             EEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC------------HHHHHHHHHHHHHHHSSCCCTT
T ss_pred             HhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC------------chHHHHHHHHHHHHHHcCCCCc
Confidence            3567888999999999999999999999999999999999854321            112334455555 777789999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHH---hccCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCeeecc
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQ---QSEQMFSDDTIRFYAAELVLALEYLHNM-GIVYRDLKPENIMIQE  163 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~---~~~~~l~~~~~~~~~~qil~aL~~LH~~-giiHrDlKp~NiLl~~  163 (426)
                      |+++++++..++..|+||||+. ++|.+++..   .....+++..+..++.|++.||.|||+. ||+||||||+|||++.
T Consensus        83 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~  161 (327)
T 3aln_A           83 IVQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDR  161 (327)
T ss_dssp             BCCEEEEEECSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEET
T ss_pred             EeeeeeEEEeCCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcC
Confidence            9999999999999999999998 477776653   2245699999999999999999999998 9999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++.+||+|||++.......                                                         ....
T Consensus       162 ~~~~kl~Dfg~~~~~~~~~---------------------------------------------------------~~~~  184 (327)
T 3aln_A          162 SGNIKLCDFGISGQLVDSI---------------------------------------------------------AKTR  184 (327)
T ss_dssp             TTEEEECCCSSSCC------------------------------------------------------------------
T ss_pred             CCCEEEccCCCceeccccc---------------------------------------------------------cccc
Confidence            9999999999987653211                                                         1122


Q ss_pred             cccCCCCccchhh----cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcC-CCCC-----CCCCHHHHH
Q 014344          244 FVGTEEYVAPEII----EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILCR-PPDL-----VGEPTPLRN  312 (426)
Q Consensus       244 ~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~-~~~~-----~~~~~~~~~  312 (426)
                      ..||+.|+|||++    .+..++.++|||||||++|+|++|+.||.+.... +....+... ++..     ...+..+.+
T Consensus       185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  264 (327)
T 3aln_A          185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN  264 (327)
T ss_dssp             ---------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHH
T ss_pred             CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHH
Confidence            3589999999998    4667899999999999999999999999875432 222222221 1111     246788999


Q ss_pred             HHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       313 li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                      ||.+||..||.+|||+.+|++||||...+
T Consensus       265 li~~~l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          265 FVNLCLTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence            99999999999999999999999997543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2.9e-47  Score=383.53  Aligned_cols=248  Identities=22%  Similarity=0.345  Sum_probs=213.7

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.++.++|++++.||+|+||.||+|...  ++.||||++...               ...+.+.+|+.+|++++||||+
T Consensus       187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~---------------~~~~~~~~E~~~l~~l~h~niv  249 (450)
T 1k9a_A          187 GWALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND---------------ATAQAFLAEASVMTQLRHSNLV  249 (450)
T ss_dssp             TCBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSC---------------TTSHHHHHHHHHHHTCCCTTBC
T ss_pred             ccccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCc---------------hHHHHHHHHHHHHHhccCCCEE
Confidence            45788899999999999999999999874  779999998432               1345788899999999999999


Q ss_pred             eeeeeeecCC-eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           90 RLRGVLSTDK-FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        90 ~l~~~~~~~~-~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++.... .+|+|||||++|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus       250 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~k  329 (450)
T 1k9a_A          250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK  329 (450)
T ss_dssp             CEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEE
T ss_pred             EEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEE
Confidence            9999976654 799999999999999999877655689999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++.....                                                           .....+|+
T Consensus       330 l~DfG~a~~~~~~-----------------------------------------------------------~~~~~~~~  350 (450)
T 1k9a_A          330 VSDFGLTKEASST-----------------------------------------------------------QDTGKLPV  350 (450)
T ss_dssp             ECCCTTCEECC-----------------------------------------------------------------CCCT
T ss_pred             EeeCCCccccccc-----------------------------------------------------------ccCCCCCc
Confidence            9999998754211                                                           11124788


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      .|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+...  .+.....+..+.+||.+||..||.+|
T Consensus       351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~R  430 (450)
T 1k9a_A          351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATR  430 (450)
T ss_dssp             TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHC
Confidence            9999999999999999999999999999998 99999988777666665432  33445678999999999999999999


Q ss_pred             CChHHHhc
Q 014344          326 IGVEEIKG  333 (426)
Q Consensus       326 ~s~~eil~  333 (426)
                      ||+.+|+.
T Consensus       431 pt~~~l~~  438 (450)
T 1k9a_A          431 PTFLQLRE  438 (450)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999975

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2e-47  Score=357.25  Aligned_cols=253  Identities=21%  Similarity=0.284  Sum_probs=216.9

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      +.++.++|++++.||+|+||.||+|.+. +++.||+|++.....              ..+.+.+|+.+++.++||||++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~   67 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM--------------SEEDFIEEAEVMMKLSHPKLVQ   67 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB--------------CHHHHHHHHHHHHTCCCTTBCC
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC--------------CHHHHHHHHHHHHhCCCCCEee
Confidence            4577889999999999999999999986 678899999854321              1246788999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++.+++..|+||||++|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        68 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~  146 (267)
T 3t9t_A           68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS  146 (267)
T ss_dssp             EEEEECSSSSCEEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEEC
T ss_pred             EEEEEccCCCeEEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEc
Confidence            9999999999999999999999999987653 458999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++.......                                                       ........||+.|
T Consensus       147 dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~y  171 (267)
T 3t9t_A          147 DFGMTRFVLDDQ-------------------------------------------------------YTSSTGTKFPVKW  171 (267)
T ss_dssp             CTTGGGGBCCHH-------------------------------------------------------HHSTTSTTCCGGG
T ss_pred             cccccccccccc-------------------------------------------------------ccccccccccccc
Confidence            999987653210                                                       0011223478899


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      +|||++.+..++.++|||||||++|+|++ |+.||...+..+....+....  ......+..+.+||.+||..||.+|||
T Consensus       172 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  251 (267)
T 3t9t_A          172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPA  251 (267)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcC
Confidence            99999999999999999999999999999 999999988888777765432  233345788999999999999999999


Q ss_pred             hHHHhcC
Q 014344          328 VEEIKGH  334 (426)
Q Consensus       328 ~~eil~h  334 (426)
                      +.+++++
T Consensus       252 ~~~ll~~  258 (267)
T 3t9t_A          252 FSRLLRQ  258 (267)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999874

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2e-47  Score=368.84  Aligned_cols=261  Identities=20%  Similarity=0.277  Sum_probs=210.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ...+..++|++++.||+|+||+||+|++..+++.+|+|+..|...        ..........+.+|+.+++.++||||+
T Consensus         9 ~~~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~--------~~~~~~~~~~~~~E~~~l~~l~hp~iv   80 (327)
T 3lzb_A            9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--------EATSPKANKEILDEAYVMASVDNPHVC   80 (327)
T ss_dssp             CEECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEEC--------CCSSCCCHHHHHHHHHHHTTCCBTTBC
T ss_pred             hcccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeec--------cccCHHHHHHHHHHHHHHHhCCCCCee
Confidence            445778899999999999999999999999988775555433211        111223456788999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.... .++|++|+.+|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        81 ~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL  158 (327)
T 3lzb_A           81 RLLGICLTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI  158 (327)
T ss_dssp             CCCEEEESSS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEE
T ss_pred             EEEEEEecCC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEE
Confidence            9999998765 789999999999999987654 45999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++........                                                      ........||+.
T Consensus       159 ~DfG~a~~~~~~~~------------------------------------------------------~~~~~~~~~t~~  184 (327)
T 3lzb_A          159 TDFGLAKLLGAEEK------------------------------------------------------EYHAEGGKVPIK  184 (327)
T ss_dssp             CCTTC----------------------------------------------------------------------CCCGG
T ss_pred             ccCcceeEccCccc------------------------------------------------------cccccCCCcccc
Confidence            99999986532110                                                      011122347889


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|+|++ |..||.+....+....+...  .+.....+..+.+||.+||..||.+||
T Consensus       185 y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  264 (327)
T 3lzb_A          185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRP  264 (327)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCc
Confidence            999999999999999999999999999999 99999988877665555433  334445688999999999999999999


Q ss_pred             ChHHHhcC
Q 014344          327 GVEEIKGH  334 (426)
Q Consensus       327 s~~eil~h  334 (426)
                      |+.|+++.
T Consensus       265 s~~ell~~  272 (327)
T 3lzb_A          265 KFRELIIE  272 (327)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999873

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2e-47  Score=368.50  Aligned_cols=257  Identities=23%  Similarity=0.318  Sum_probs=217.3

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceE--EEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CC
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESF--ALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EH   85 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~v--AiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h   85 (426)
                      ..+.+++++|++.+.||+|+||.||+|++..++..+  |+|++....            .....+.+.+|+.+|+++ +|
T Consensus        18 ~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~------------~~~~~~~~~~E~~~l~~l~~h   85 (327)
T 1fvr_A           18 IYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA------------SKDDHRDFAGELEVLCKLGHH   85 (327)
T ss_dssp             CSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------CHHHHHHHHHTTCCCC
T ss_pred             ccccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc------------chHHHHHHHHHHHHHHhccCC
Confidence            356688899999999999999999999999888865  999885321            112345788899999999 89


Q ss_pred             CCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 014344           86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGIVY  151 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~giiH  151 (426)
                      |||+++++++.+.+.+|+|||||+|++|.+++....              ...+++..++.++.||+.||.|||++||+|
T Consensus        86 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  165 (327)
T 1fvr_A           86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIH  165 (327)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            999999999999999999999999999999987542              246999999999999999999999999999


Q ss_pred             cCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCC
Q 014344          152 RDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPS  231 (426)
Q Consensus       152 rDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (426)
                      |||||+|||++.++.+||+|||++......                                                  
T Consensus       166 ~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~--------------------------------------------------  195 (327)
T 1fvr_A          166 RDLAARNILVGENYVAKIADFGLSRGQEVY--------------------------------------------------  195 (327)
T ss_dssp             SCCSGGGEEECGGGCEEECCTTCEESSCEE--------------------------------------------------
T ss_pred             CCCccceEEEcCCCeEEEcccCcCcccccc--------------------------------------------------
Confidence            999999999999999999999998743210                                                  


Q ss_pred             CCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCH
Q 014344          232 RSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPT  308 (426)
Q Consensus       232 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~  308 (426)
                             .......+|+.|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....+...  .......+.
T Consensus       196 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (327)
T 1fvr_A          196 -------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD  268 (327)
T ss_dssp             -------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCH
T ss_pred             -------ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCH
Confidence                   01122347889999999999889999999999999999998 99999999888877776543  233345688


Q ss_pred             HHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          309 PLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       309 ~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+.+||.+||..||.+|||+++++++
T Consensus       269 ~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          269 EVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.1e-47  Score=363.67  Aligned_cols=257  Identities=24%  Similarity=0.335  Sum_probs=204.7

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .....+++|++++.||+|+||.||+|++..+++.||||++......          .....+.+.+|+.+++.++||||+
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----------~~~~~~~~~~e~~~l~~l~hp~iv   97 (309)
T 2h34_A           28 REGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS----------DPVFRTRMQREARTAGRLQEPHVV   97 (309)
T ss_dssp             ------CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG----------SHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred             CCCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc----------CHHHHHHHHHHHHHHhhcCCCCee
Confidence            3456788999999999999999999999999999999998554321          123456788999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++..++.+|+||||++|++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl  175 (309)
T 2h34_A           98 PIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYL  175 (309)
T ss_dssp             CEEEEEEETTEEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             EEEEEEeeCCeEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEE
Confidence            99999999999999999999999999987653  4999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++.......                                                       .......+||+.
T Consensus       176 ~Dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~~  200 (309)
T 2h34_A          176 VDFGIASATTDEK-------------------------------------------------------LTQLGNTVGTLY  200 (309)
T ss_dssp             CSCCC-----------------------------------------------------------------------CCGG
T ss_pred             ecCccCccccccc-------------------------------------------------------cccccccCCCcC
Confidence            9999987653211                                                       011234469999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----CCCCCCHHHHHHHHHHhccCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP----DLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      |+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....+    .....+..+.+||.+||..||.+|
T Consensus       201 y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  280 (309)
T 2h34_A          201 YMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDR  280 (309)
T ss_dssp             GCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGS
T ss_pred             ccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHH
Confidence            9999999999999999999999999999999999998776544444433222    123568889999999999999999


Q ss_pred             C-ChHHHhc
Q 014344          326 I-GVEEIKG  333 (426)
Q Consensus       326 ~-s~~eil~  333 (426)
                      | +++++++
T Consensus       281 p~s~~~l~~  289 (309)
T 2h34_A          281 YVTCGDLSA  289 (309)
T ss_dssp             CSSHHHHHH
T ss_pred             HHhHHHHHH
Confidence            9 7888875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=3.7e-47  Score=367.83  Aligned_cols=262  Identities=19%  Similarity=0.312  Sum_probs=219.3

Q ss_pred             CCCCCCCCCCCcEEEeeecccCceEEEEEEEc-------CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHH
Q 014344            7 DRPIRSLDFSCLRIVSALGRGAKGVVFLVKDV-------ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV   79 (426)
Q Consensus         7 ~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-------~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i   79 (426)
                      ..+.+.+..++|++++.||+|+||+||+|++.       .++..||||++....            .......+.+|+.+
T Consensus        26 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~   93 (334)
T 2pvf_A           26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA------------TEKDLSDLVSEMEM   93 (334)
T ss_dssp             CCTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC------------CHHHHHHHHHHHHH
T ss_pred             CCccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC------------cHHHHHHHHHHHHH
Confidence            34566778899999999999999999999986       456789999985432            12345678899999


Q ss_pred             HHhc-CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHH
Q 014344           80 LRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--------------QMFSDDTIRFYAAELVLALEYL  144 (426)
Q Consensus        80 l~~l-~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~--------------~~l~~~~~~~~~~qil~aL~~L  144 (426)
                      ++.+ +||||+++++++..++.+|+|||||+|++|.+++.....              ..+++..+..++.||+.||.||
T Consensus        94 l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  173 (334)
T 2pvf_A           94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL  173 (334)
T ss_dssp             HHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            9999 899999999999999999999999999999999875432              2489999999999999999999


Q ss_pred             HHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCC
Q 014344          145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPR  224 (426)
Q Consensus       145 H~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (426)
                      |++||+||||||+|||++.++.+||+|||++........                                         
T Consensus       174 H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-----------------------------------------  212 (334)
T 2pvf_A          174 ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-----------------------------------------  212 (334)
T ss_dssp             HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-----------------------------------------
T ss_pred             HhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------------------
Confidence            999999999999999999999999999999976532110                                         


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CC
Q 014344          225 IGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PP  301 (426)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~  301 (426)
                                   ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...  ..
T Consensus       213 -------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~  279 (334)
T 2pvf_A          213 -------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD  279 (334)
T ss_dssp             -------------EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC
T ss_pred             -------------ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCC
Confidence                         001122347889999999999889999999999999999999 99999998887776665433  23


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       302 ~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .....+..+.+||.+||..||.+|||+.+++++
T Consensus       280 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            344668899999999999999999999999875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=4.1e-47  Score=359.26  Aligned_cols=257  Identities=24%  Similarity=0.334  Sum_probs=209.8

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      ..+.+..++|++.+.||+|+||+||+|++..+++.||+|++...........      ....+.+.+|+.+++.++||||
T Consensus        12 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~i   85 (287)
T 4f0f_A           12 RLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM------IEKFQEFQREVFIMSNLNHPNI   85 (287)
T ss_dssp             CCCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHH------HCCSHHHHHHHHHHTTCCCTTB
T ss_pred             hhhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhH------HHHHHHHHHHHHHHHhCCCCCc
Confidence            3566788999999999999999999999999999999999854322111000      0123678899999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeeeccCCc
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQENGH  166 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiLl~~~g~  166 (426)
                      +++++++.+..  ++||||++|++|.+++.... ..+++..+..++.||+.||.|||++|  |+||||||+|||++.++.
T Consensus        86 ~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~  162 (287)
T 4f0f_A           86 VKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE  162 (287)
T ss_dssp             CCEEEEETTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT
T ss_pred             hhhheeecCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC
Confidence            99999997665  69999999999988876543 45999999999999999999999999  999999999999988776


Q ss_pred             -----EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          167 -----IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       167 -----ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                           +||+|||++.....                                                           ..
T Consensus       163 ~~~~~~kl~Dfg~~~~~~~-----------------------------------------------------------~~  183 (287)
T 4f0f_A          163 NAPVCAKVADFGLSQQSVH-----------------------------------------------------------SV  183 (287)
T ss_dssp             TCSCCEEECCCTTCBCCSS-----------------------------------------------------------CE
T ss_pred             CCceeEEeCCCCccccccc-----------------------------------------------------------cc
Confidence                 99999999874321                                                           12


Q ss_pred             cccccCCCCccchhhc--CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHh---cCCCCCCCCCHHHHHHH
Q 014344          242 NSFVGTEEYVAPEIIE--GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET--FYRIL---CRPPDLVGEPTPLRNLI  314 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~i~---~~~~~~~~~~~~~~~li  314 (426)
                      ...+||+.|+|||++.  ...++.++|||||||++|+|++|+.||...+....  ...+.   ..+......++.+.+||
T Consensus       184 ~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  263 (287)
T 4f0f_A          184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVI  263 (287)
T ss_dssp             ECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHH
T ss_pred             cccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHH
Confidence            2346999999999994  45578999999999999999999999987654322  22222   12233346688999999


Q ss_pred             HHHhccCCCCCCChHHHhc
Q 014344          315 RRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~  333 (426)
                      .+||+.||.+|||++++++
T Consensus       264 ~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          264 ELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhcCChhhCcCHHHHHH
Confidence            9999999999999999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.3e-47  Score=375.03  Aligned_cols=258  Identities=24%  Similarity=0.325  Sum_probs=207.5

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      ...+..++|++.+.||+|+||.||+|++.   .++..||||++....            .....+.+.+|+.+|++++||
T Consensus        39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~  106 (373)
T 2qol_A           39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY------------TEKQRRDFLGEASIMGQFDHP  106 (373)
T ss_dssp             SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC------------CHHHHHHHHHHHHHHTTCCCT
T ss_pred             HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc------------CHHHHHHHHHHHHHHHhCCCC
Confidence            34677789999999999999999999987   467789999985421            122456788999999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++.....+|+|||||+|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus       107 niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  185 (373)
T 2qol_A          107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV  185 (373)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC
T ss_pred             CCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCC
Confidence            99999999999999999999999999999987543 45999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++.........                                                     ........+
T Consensus       186 ~kl~Dfg~a~~~~~~~~~-----------------------------------------------------~~~~~~~~~  212 (373)
T 2qol_A          186 CKVSDFGLGRVLEDDPEA-----------------------------------------------------AYTTRGGKI  212 (373)
T ss_dssp             EEECCC--------------------------------------------------------------------------
T ss_pred             EEECcCccccccccCCcc-----------------------------------------------------ceeccCCCc
Confidence            999999999765421100                                                     001112236


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      |+.|+|||++.+..++.++|||||||++|||++ |+.||...+..+....+...  .+.....+..+.+||.+||+.||.
T Consensus       213 ~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~  292 (373)
T 2qol_A          213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRN  292 (373)
T ss_dssp             -CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGG
T ss_pred             CCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChh
Confidence            788999999999999999999999999999997 99999998887777666533  334456788999999999999999


Q ss_pred             CCCChHHHhc
Q 014344          324 KRIGVEEIKG  333 (426)
Q Consensus       324 ~R~s~~eil~  333 (426)
                      +||++.+|++
T Consensus       293 ~RPs~~~i~~  302 (373)
T 2qol_A          293 NRPKFEQIVS  302 (373)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999986

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.5e-47  Score=389.96  Aligned_cols=255  Identities=22%  Similarity=0.305  Sum_probs=220.2

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.+..++|++.+.||+|+||.||+|++..++..||||++....              ...+.+.+|+.+|++++||||+
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~hpniv  279 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMKEIKHPNLV  279 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--------------SCHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--------------cchHHHHHHHHHHHhcCCCCEe
Confidence            35677789999999999999999999999999999999984321              1346788999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.....+|+|||||++|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus       280 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl  359 (495)
T 1opk_A          280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKV  359 (495)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEE
T ss_pred             eEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEE
Confidence            99999999999999999999999999998766667999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++......                                                       ........+|+.
T Consensus       360 ~DFG~a~~~~~~~-------------------------------------------------------~~~~~~~~~~~~  384 (495)
T 1opk_A          360 ADFGLSRLMTGDT-------------------------------------------------------YTAHAGAKFPIK  384 (495)
T ss_dssp             CCTTCEECCTTCC-------------------------------------------------------EECCTTCCCCGG
T ss_pred             eecccceeccCCc-------------------------------------------------------eeecCCCcCCcc
Confidence            9999998653211                                                       001112246788


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+...  .+.....+..+.+||.+||+.||.+||
T Consensus       385 y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP  464 (495)
T 1opk_A          385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP  464 (495)
T ss_dssp             GCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             eeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCc
Confidence            999999999999999999999999999998 99999998877666555432  233446789999999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      |+.+|++
T Consensus       465 s~~el~~  471 (495)
T 1opk_A          465 SFAEIHQ  471 (495)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999976

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.1e-47  Score=369.70  Aligned_cols=252  Identities=21%  Similarity=0.293  Sum_probs=201.2

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      +...++.++|++++.||+|+||+||+|++.  ++.||||++.....              .......|+.+|+.++||||
T Consensus        17 ~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~--------------~~~~~~~E~~~l~~l~hpni   80 (322)
T 3soc_A           17 ENLYFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK--------------QSWQNEYEVYSLPGMKHENI   80 (322)
T ss_dssp             CCEEETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH--------------HHHHHHHHHHTSTTCCCTTB
T ss_pred             cccccchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch--------------HHHHHHHHHHHHhcCCCCCc
Confidence            344577889999999999999999999875  78999999854321              22344558899999999999


Q ss_pred             ceeeeeeecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC----------CCcccCC
Q 014344           89 PRLRGVLSTDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM----------GIVYRDL  154 (426)
Q Consensus        89 v~l~~~~~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~----------giiHrDl  154 (426)
                      +++++++....    .+|+|||||++|+|.++++..   .+++..+..++.||+.||.|||+.          ||+||||
T Consensus        81 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dl  157 (322)
T 3soc_A           81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDI  157 (322)
T ss_dssp             CCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCC
T ss_pred             hhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCC
Confidence            99999997744    479999999999999998753   399999999999999999999999          9999999


Q ss_pred             CCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          155 KPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSD  234 (426)
Q Consensus       155 Kp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (426)
                      ||+|||++.++.+||+|||++..+.....                                                   
T Consensus       158 kp~Nill~~~~~~kL~DFg~a~~~~~~~~---------------------------------------------------  186 (322)
T 3soc_A          158 KSKNVLLKNNLTACIADFGLALKFEAGKS---------------------------------------------------  186 (322)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEEECTTSC---------------------------------------------------
T ss_pred             ChHhEEECCCCeEEEccCCcccccccccC---------------------------------------------------
Confidence            99999999999999999999976642210                                                   


Q ss_pred             CCCCCCccccccCCCCccchhhcCC-----CCChhhHHHHHHHHHHHHHhCCCCCCCCCH----------------HHHH
Q 014344          235 SDSSEKSNSFVGTEEYVAPEIIEGK-----GHDFAVDWWSLGVVLHEMLYGATPFRGSSR----------------KETF  293 (426)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~ell~g~~pf~~~~~----------------~~~~  293 (426)
                         .......+||+.|+|||++.+.     .++.++|||||||++|+|++|+.||.+...                ....
T Consensus       187 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  263 (322)
T 3soc_A          187 ---AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQ  263 (322)
T ss_dssp             ---CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHH
T ss_pred             ---ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhh
Confidence               1122335799999999999873     456789999999999999999999976431                1222


Q ss_pred             HHHhcCC--CCCCC------CCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          294 YRILCRP--PDLVG------EPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       294 ~~i~~~~--~~~~~------~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ..+....  +....      .+..+.+||.+||+.||++|||+.++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          264 EVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            2222111  11111      1234899999999999999999999986

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.3e-47  Score=367.71  Aligned_cols=259  Identities=19%  Similarity=0.299  Sum_probs=216.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCc-----eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSE-----SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-   83 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-   83 (426)
                      ...+..++|++++.||+|+||+||+|.+..+++     .||+|++....            .......+.+|+.+|+.+ 
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~  107 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA------------HADEKEALMSELKIMSHLG  107 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC------------CHHHHHHHHHHHHHHHHHC
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc------------ChHHHHHHHHHHHHHHhhc
Confidence            345677899999999999999999999977664     79999985432            123456788999999999 


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS------------EQMFSDDTIRFYAAELVLALEYLHNMGIVY  151 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~------------~~~l~~~~~~~~~~qil~aL~~LH~~giiH  151 (426)
                      +||||+++++++...+.+|+|||||++|+|.+++....            ...+++..+..++.||+.||.|||++||+|
T Consensus       108 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH  187 (333)
T 2i1m_A          108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIH  187 (333)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            89999999999999999999999999999999887542            345899999999999999999999999999


Q ss_pred             cCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCC
Q 014344          152 RDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPS  231 (426)
Q Consensus       152 rDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (426)
                      |||||+|||++.++.+||+|||++........                                                
T Consensus       188 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------  219 (333)
T 2i1m_A          188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSN------------------------------------------------  219 (333)
T ss_dssp             SCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT------------------------------------------------
T ss_pred             CCcccceEEECCCCeEEECccccccccccccc------------------------------------------------
Confidence            99999999999999999999999976532110                                                


Q ss_pred             CCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc---CCCCCCCCC
Q 014344          232 RSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC---RPPDLVGEP  307 (426)
Q Consensus       232 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~---~~~~~~~~~  307 (426)
                            ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+......+..+..   ........+
T Consensus       220 ------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (333)
T 2i1m_A          220 ------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP  293 (333)
T ss_dssp             ------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCC
T ss_pred             ------eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCC
Confidence                  011223457889999999999999999999999999999998 9999988765554444432   223334568


Q ss_pred             HHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          308 TPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       308 ~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ..+.+||.+||+.||.+|||+.+++++
T Consensus       294 ~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          294 KNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            899999999999999999999999873

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-47  Score=366.65  Aligned_cols=257  Identities=27%  Similarity=0.360  Sum_probs=203.0

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc----CCCCc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV----EHPLL   88 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l----~hp~i   88 (426)
                      .-.++|++++.||+|+||.||+|++..+++.||||++.........       .......+..|+.+++++    +||||
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~~h~~i  100 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWS-------PLSDSVTCPLEVALLWKVGAGGGHPGV  100 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC---------------CCCCHHHHHHHHHHSSCCCSSB
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccc-------cchhhHHHHHHHHHHHhhcccCCCCCe
Confidence            3456799999999999999999999999999999999654321110       011223455688999998    89999


Q ss_pred             ceeeeeeecCCeEEEEEec-cCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec-cCCc
Q 014344           89 PRLRGVLSTDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ-ENGH  166 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey-~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~-~~g~  166 (426)
                      +++++++...+..++|||| +.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus       101 ~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  178 (312)
T 2iwi_A          101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC  178 (312)
T ss_dssp             CCEEEEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTE
T ss_pred             eeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCe
Confidence            9999999999999999999 78999999987653  499999999999999999999999999999999999999 8899


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++......                                                          ......|
T Consensus       179 ~kl~dfg~~~~~~~~----------------------------------------------------------~~~~~~~  200 (312)
T 2iwi_A          179 AKLIDFGSGALLHDE----------------------------------------------------------PYTDFDG  200 (312)
T ss_dssp             EEECCCSSCEECCSS----------------------------------------------------------CBCCCCS
T ss_pred             EEEEEcchhhhcccC----------------------------------------------------------cccccCC
Confidence            999999998765321                                                          1223458


Q ss_pred             CCCCccchhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          247 TEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       247 t~~y~aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      |+.|+|||++.+..+ +.++|||||||++|+|++|+.||....  +...   .........+..+.+||.+||..||++|
T Consensus       201 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~R  275 (312)
T 2iwi_A          201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--EILE---AELHFPAHVSPDCCALIRRCLAPKPSSR  275 (312)
T ss_dssp             CTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--HHHH---TCCCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             cccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--HHhh---hccCCcccCCHHHHHHHHHHccCChhhC
Confidence            999999999987666 469999999999999999999997542  1111   1222234568899999999999999999


Q ss_pred             CChHHHhcCCCcCCCC
Q 014344          326 IGVEEIKGHEFFKGVN  341 (426)
Q Consensus       326 ~s~~eil~hp~f~~~~  341 (426)
                      ||++|+++||||+...
T Consensus       276 ps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          276 PSLEEILLDPWMQTPA  291 (312)
T ss_dssp             CCHHHHHHSTTTCC--
T ss_pred             cCHHHHhcChhhcCch
Confidence            9999999999998643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=5e-47  Score=363.43  Aligned_cols=258  Identities=26%  Similarity=0.410  Sum_probs=207.5

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--CCCcc
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--HPLLP   89 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~iv   89 (426)
                      .+...+|++++.||+|+||.||+|.+. +++.||||++.....           .......+.+|+.+++.+.  ||||+
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----------~~~~~~~~~~E~~~l~~l~~~~~~iv   91 (313)
T 3cek_A           24 SVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-----------DNQTLDSYRNEIAYLNKLQQHSDKII   91 (313)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-----------CHHHHHHHHHHHHHHHHHGGGCTTBC
T ss_pred             eeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-----------cccchHHHHHHHHHHHhccccCCceE
Confidence            345567999999999999999999985 588999999854321           2234567888999999997  59999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++..+..+|+||| +.+++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||
T Consensus        92 ~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL  167 (313)
T 3cek_A           92 RLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKL  167 (313)
T ss_dssp             CEEEEEECSSEEEEEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEE
T ss_pred             EEEEEeecCCEEEEEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEE
Confidence            99999999999999999 5589999998764  3589999999999999999999999999999999999996 589999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++..+.....                                                      .......+||+.
T Consensus       168 ~Dfg~~~~~~~~~~------------------------------------------------------~~~~~~~~gt~~  193 (313)
T 3cek_A          168 IDFGIANQMQPDTT------------------------------------------------------SVVKDSQVGTVN  193 (313)
T ss_dssp             CCCSSSCC--------------------------------------------------------------------CCGG
T ss_pred             eeccccccccCccc------------------------------------------------------cccccCCCCCCC
Confidence            99999986542110                                                      011224469999


Q ss_pred             CccchhhcC-----------CCCChhhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCC---CCCCCCCHHHHHHH
Q 014344          250 YVAPEIIEG-----------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-KETFYRILCRP---PDLVGEPTPLRNLI  314 (426)
Q Consensus       250 y~aPE~~~~-----------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~---~~~~~~~~~~~~li  314 (426)
                      |+|||++.+           ..++.++|||||||++|+|++|+.||..... ......+....   ......+..+.+||
T Consensus       194 y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  273 (313)
T 3cek_A          194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL  273 (313)
T ss_dssp             GCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHH
T ss_pred             cCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHH
Confidence            999999976           4688999999999999999999999987643 33344443221   22234477899999


Q ss_pred             HHHhccCCCCCCChHHHhcCCCcCC
Q 014344          315 RRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      .+||..||.+|||+.|+++||||+.
T Consensus       274 ~~~l~~dp~~Rps~~ell~h~~~~~  298 (313)
T 3cek_A          274 KCCLKRDPKQRISIPELLAHPYVQI  298 (313)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred             HHHccCCcccCcCHHHHhcCccccC
Confidence            9999999999999999999999974

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=4.5e-47  Score=382.54  Aligned_cols=253  Identities=20%  Similarity=0.301  Sum_probs=215.5

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.+..++|++.+.||+|+||+||+|.+. ++..||||++....              ...+.+.+|+.+|+.++||||+
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv  246 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS--------------MSVEAFLAEANVMKTLQHDKLV  246 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS--------------BCHHHHHHHHHHHTTCCCTTBC
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC--------------ccHHHHHHHHHHHhhCCCCCEe
Confidence            45677889999999999999999999985 46789999985421              1246788999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++. .+.+|+|||||.+|+|.++++......++...+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus       247 ~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl  325 (454)
T 1qcf_A          247 KLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI  325 (454)
T ss_dssp             CEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEE
T ss_pred             eEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEE
Confidence            9999986 667899999999999999987654445899999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++......                                                       ........+|+.
T Consensus       326 ~DFG~a~~~~~~~-------------------------------------------------------~~~~~~~~~~~~  350 (454)
T 1qcf_A          326 ADFGLARVIEDNE-------------------------------------------------------YTAREGAKFPIK  350 (454)
T ss_dssp             CSTTGGGGBCCHH-------------------------------------------------------HHTTCSSSSCGG
T ss_pred             eeCCCceEcCCCc-------------------------------------------------------eeccCCCccccc
Confidence            9999998653210                                                       000112236788


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+..  ..+.....+..+.+||.+||..||.+||
T Consensus       351 y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP  430 (454)
T 1qcf_A          351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP  430 (454)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCc
Confidence            999999999999999999999999999999 9999999988877766653  3344456789999999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      |+++|+.
T Consensus       431 t~~~i~~  437 (454)
T 1qcf_A          431 TFEYIQS  437 (454)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999975

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.5e-47  Score=367.91  Aligned_cols=262  Identities=17%  Similarity=0.238  Sum_probs=215.5

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEE-----EcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVK-----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~-----~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      ...+..++|++++.||+|+||.||+|+     +..+++.||||++....            .......+.+|+.+++.++
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~   91 (327)
T 2yfx_A           24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC------------SEQDELDFLMEALIISKFN   91 (327)
T ss_dssp             SCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC------------CHHHHHHHHHHHHHHHHCC
T ss_pred             cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc------------chhhHHHHHHHHHHHhhCC
Confidence            456778899999999999999999999     55778899999984321            1223457888999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCe
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE-----QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENI  159 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~-----~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~Ni  159 (426)
                      ||||+++++++......|+|||||+|++|.+++.....     ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus        92 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NI  171 (327)
T 2yfx_A           92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC  171 (327)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             CCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHE
Confidence            99999999999999999999999999999999886532     3489999999999999999999999999999999999


Q ss_pred             eeccC---CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          160 MIQEN---GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD  236 (426)
Q Consensus       160 Ll~~~---g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (426)
                      |++.+   +.+||+|||++.......                                                      
T Consensus       172 li~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------------  197 (327)
T 2yfx_A          172 LLTCPGPGRVAKIGDFGMARDIYRAS------------------------------------------------------  197 (327)
T ss_dssp             EESCSSTTCCEEECCCHHHHHHHC--------------------------------------------------------
T ss_pred             EEecCCCcceEEECcccccccccccc------------------------------------------------------
Confidence            99944   469999999987542211                                                      


Q ss_pred             CCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHH
Q 014344          237 SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNL  313 (426)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~l  313 (426)
                      .........||+.|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+...  .......+..+.+|
T Consensus       198 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  277 (327)
T 2yfx_A          198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI  277 (327)
T ss_dssp             ----CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence            0012234468999999999999999999999999999999998 99999998887776666543  23334568899999


Q ss_pred             HHHHhccCCCCCCChHHHhcCCCc
Q 014344          314 IRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      |.+||..||.+|||+.+|++|.|+
T Consensus       278 i~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          278 MTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhcCChhhCcCHHHHHHHHHH
Confidence            999999999999999999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=9.2e-47  Score=355.91  Aligned_cols=257  Identities=22%  Similarity=0.301  Sum_probs=212.3

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcC---CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVE---SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      +...+..++|++.+.||+|+||+||+|++..   ++..||+|++.+..            .....+.+.+|+.+++.++|
T Consensus         5 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h   72 (281)
T 3cc6_A            5 PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC------------TLDNKEKFMSEAVIMKNLDH   72 (281)
T ss_dssp             CCCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS------------CHHHHHHHHHHHHHHHHHCC
T ss_pred             ccceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc------------CchHHHHHHHHHHHHHhCCC
Confidence            3457788899999999999999999999754   34469999985432            12245678899999999999


Q ss_pred             CCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC
Q 014344           86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG  165 (426)
Q Consensus        86 p~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g  165 (426)
                      |||+++++++.++ ..|+||||++|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus        73 ~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  150 (281)
T 3cc6_A           73 PHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE  150 (281)
T ss_dssp             TTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETT
T ss_pred             CCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCC
Confidence            9999999998654 5689999999999999987654 4599999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++........                                                       .......
T Consensus       151 ~~kl~Dfg~~~~~~~~~~-------------------------------------------------------~~~~~~~  175 (281)
T 3cc6_A          151 CVKLGDFGLSRYIEDEDY-------------------------------------------------------YKASVTR  175 (281)
T ss_dssp             EEEECCCCGGGCC----------------------------------------------------------------CCC
T ss_pred             cEEeCccCCCcccccccc-------------------------------------------------------cccccCC
Confidence            999999999876532110                                                       0112234


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      ||+.|+|||++.+..++.++|||||||++|+|++ |+.||...........+..  ..+.....+..+.+||.+||..||
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  255 (281)
T 3cc6_A          176 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDP  255 (281)
T ss_dssp             CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             CCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            7889999999999999999999999999999998 9999987776655544432  233344568899999999999999


Q ss_pred             CCCCChHHHhcC
Q 014344          323 TKRIGVEEIKGH  334 (426)
Q Consensus       323 ~~R~s~~eil~h  334 (426)
                      .+|||+.+++++
T Consensus       256 ~~Rps~~ell~~  267 (281)
T 3cc6_A          256 SDRPRFTELVCS  267 (281)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999999875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-46  Score=361.82  Aligned_cols=258  Identities=23%  Similarity=0.294  Sum_probs=211.9

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCC----ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESS----ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~----~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      .++..++|++.+.||+|+||+||+|.+..++    ..||||++....            .......+.+|+.+++.++||
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~  106 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY------------TEKQRVDFLGEAGIMGQFSHH  106 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC------------CHHHHHHHHHHHHHHHTCCCT
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC------------CHHHHHHHHHHHHHHHhCCCC
Confidence            4677889999999999999999999987654    359999985431            122345788899999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++...+.+|+|||||+|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus       107 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~  185 (333)
T 1mqb_A          107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV  185 (333)
T ss_dssp             TBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC
T ss_pred             CCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCc
Confidence            99999999999999999999999999999987643 45999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++.........                                                     ........+
T Consensus       186 ~kl~Dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~  212 (333)
T 1mqb_A          186 CKVSDFGLSRVLEDDPEA-----------------------------------------------------TYTTSGGKI  212 (333)
T ss_dssp             EEECCCCC----------------------------------------------------------------------CC
T ss_pred             EEECCCCcchhhcccccc-----------------------------------------------------ccccCCCCc
Confidence            999999999865421100                                                     001112246


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      |+.|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....+...  .+.....+..+.+||.+||+.||.
T Consensus       213 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  292 (333)
T 1mqb_A          213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA  292 (333)
T ss_dssp             CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTT
T ss_pred             cccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChh
Confidence            889999999999999999999999999999998 99999998887777666543  334456788999999999999999


Q ss_pred             CCCChHHHhcC
Q 014344          324 KRIGVEEIKGH  334 (426)
Q Consensus       324 ~R~s~~eil~h  334 (426)
                      +||++.+++++
T Consensus       293 ~Rps~~~l~~~  303 (333)
T 1mqb_A          293 RRPKFADIVSI  303 (333)
T ss_dssp             TSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=4.4e-47  Score=358.01  Aligned_cols=245  Identities=21%  Similarity=0.311  Sum_probs=208.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++++.||+|+||.||+|++..+++.||+|++....                 ..+.+|+.+++.++||||+++++++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------------~~~~~e~~~l~~l~h~~i~~~~~~~   73 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----------------EKAEREVKALAKLDHVNIVHYNGCW   73 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----------------GGGHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----------------HHHHHHHHHHHhCCCCCEEEEeeeE
Confidence            46999999999999999999999999999999984321                 2456799999999999999999988


Q ss_pred             ec----------------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCe
Q 014344           96 ST----------------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENI  159 (426)
Q Consensus        96 ~~----------------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~Ni  159 (426)
                      ..                ...+|+|||||++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Ni  153 (284)
T 2a19_B           74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNI  153 (284)
T ss_dssp             EEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             eccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHE
Confidence            54                45689999999999999999876666799999999999999999999999999999999999


Q ss_pred             eeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          160 MIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE  239 (426)
Q Consensus       160 Ll~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (426)
                      |++.++.+||+|||++.......                                                         
T Consensus       154 l~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------------  176 (284)
T 2a19_B          154 FLVDTKQVKIGDFGLVTSLKNDG---------------------------------------------------------  176 (284)
T ss_dssp             EEEETTEEEECCCTTCEESSCCS---------------------------------------------------------
T ss_pred             EEcCCCCEEECcchhheeccccc---------------------------------------------------------
Confidence            99999999999999987653211                                                         


Q ss_pred             CccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhc
Q 014344          240 KSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       240 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~  319 (426)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|..||...  ...+..+ .........+..+.+||.+||.
T Consensus       177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~li~~~l~  253 (284)
T 2a19_B          177 KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDL-RDGIISDIFDKKEKTLLQKLLS  253 (284)
T ss_dssp             CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHH-HTTCCCTTSCHHHHHHHHHHTC
T ss_pred             cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHh-hcccccccCCHHHHHHHHHHcc
Confidence            112335899999999999999999999999999999999999988532  2222222 2222334568889999999999


Q ss_pred             cCCCCCCChHHHhcCCCc
Q 014344          320 KDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       320 ~dP~~R~s~~eil~hp~f  337 (426)
                      .||.+|||+.|+++|.+.
T Consensus       254 ~dp~~Rps~~e~l~~l~~  271 (284)
T 2a19_B          254 KKPEDRPNTSEILRTLTV  271 (284)
T ss_dssp             SSGGGSCCHHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHHH
Confidence            999999999999998754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=5.7e-47  Score=359.01  Aligned_cols=256  Identities=23%  Similarity=0.359  Sum_probs=200.1

Q ss_pred             CCCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344            8 RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus         8 ~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      .+..++.-++|++++.||+|+||+||+|++.   ..||+|++....           ......+.+.+|+.+|+.++|||
T Consensus        16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~h~~   81 (289)
T 3og7_A           16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-----------PTPQQLQAFKNEVGVLRKTRHVN   81 (289)
T ss_dssp             --CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSS-----------CCHHHHHHHHHHHHHHTTCCCTT
T ss_pred             CCCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccC-----------CCHHHHHHHHHHHHHHHhCCCCc
Confidence            3456788889999999999999999999864   359999985432           12234567889999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |++++++. .....++|||||.|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        82 iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~  159 (289)
T 3og7_A           82 ILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTV  159 (289)
T ss_dssp             BCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEEEeec-cCCccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCE
Confidence            99999954 566789999999999999987544 3459999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++........                                                      ........||
T Consensus       160 kl~Dfg~~~~~~~~~~------------------------------------------------------~~~~~~~~gt  185 (289)
T 3og7_A          160 KIGDFGLATEKSRWSG------------------------------------------------------SHQFEQLSGS  185 (289)
T ss_dssp             EECCCC------------------------------------------------------------------------CC
T ss_pred             EEccceeccccccccc------------------------------------------------------cccccccCCC
Confidence            9999999875532110                                                      1122344699


Q ss_pred             CCCccchhhc---CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCC----CCCCCHHHHHHHHHH
Q 014344          248 EEYVAPEIIE---GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPD----LVGEPTPLRNLIRRL  317 (426)
Q Consensus       248 ~~y~aPE~~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~~~----~~~~~~~~~~li~~~  317 (426)
                      +.|+|||++.   +..++.++|||||||++|+|++|+.||.+.............   .+.    ....+..+.+||.+|
T Consensus       186 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  265 (289)
T 3og7_A          186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAEC  265 (289)
T ss_dssp             CTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHH
T ss_pred             ccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHH
Confidence            9999999997   667899999999999999999999999887665554444321   111    225678899999999


Q ss_pred             hccCCCCCCChHHHhc
Q 014344          318 LEKDPTKRIGVEEIKG  333 (426)
Q Consensus       318 L~~dP~~R~s~~eil~  333 (426)
                      |..||.+|||+.++++
T Consensus       266 l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          266 LKKKRDERPSFPRILA  281 (289)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhhCCCHHHHHH
Confidence            9999999999999986

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=8.5e-47  Score=361.69  Aligned_cols=266  Identities=21%  Similarity=0.254  Sum_probs=211.3

Q ss_pred             cCCCCCCCCCCCCCcEEEeeecccCceEEEEEEEcC---CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHH
Q 014344            4 VVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVE---SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL   80 (426)
Q Consensus         4 ~~~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il   80 (426)
                      +-+......+..++|++.+.||+|+||+||+|.+..   +++.||+|++.....           .....+.+.+|+.++
T Consensus        22 l~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~e~~~l   90 (313)
T 3brb_A           22 LQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-----------SQREIEEFLSEAACM   90 (313)
T ss_dssp             --CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-----------CHHHHHHHHHHHHHH
T ss_pred             hhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-----------chhHHHHHHHHHHHH
Confidence            444455566778899999999999999999998765   556899999854321           223456788999999


Q ss_pred             HhcCCCCcceeeeeeecCC-----eEEEEEeccCCCChHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 014344           81 RNVEHPLLPRLRGVLSTDK-----FVGYAIDYCPGRDLHSLRKQQ----SEQMFSDDTIRFYAAELVLALEYLHNMGIVY  151 (426)
Q Consensus        81 ~~l~hp~iv~l~~~~~~~~-----~~~lV~Ey~~gg~L~~l~~~~----~~~~l~~~~~~~~~~qil~aL~~LH~~giiH  151 (426)
                      +.++||||+++++++....     ..|+||||+++++|.+++...    ....+++..++.++.||+.||.|||++||+|
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  170 (313)
T 3brb_A           91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLH  170 (313)
T ss_dssp             HTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred             hcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            9999999999999997654     459999999999999987542    3356999999999999999999999999999


Q ss_pred             cCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCC
Q 014344          152 RDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPS  231 (426)
Q Consensus       152 rDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (426)
                      |||||+|||++.++.+||+|||++........                                                
T Consensus       171 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------  202 (313)
T 3brb_A          171 RDLAARNCMLRDDMTVCVADFGLSKKIYSGDY------------------------------------------------  202 (313)
T ss_dssp             CCCSGGGEEECTTSCEEECSCSCC--------------------------------------------------------
T ss_pred             CCCCcceEEEcCCCcEEEeecCcceecccccc------------------------------------------------
Confidence            99999999999999999999999876532110                                                


Q ss_pred             CCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCH
Q 014344          232 RSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPT  308 (426)
Q Consensus       232 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~  308 (426)
                            ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+...  +......+.
T Consensus       203 ------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (313)
T 3brb_A          203 ------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD  276 (313)
T ss_dssp             --------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCH
T ss_pred             ------cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccH
Confidence                  011123347889999999999999999999999999999999 99999998877776666543  333446688


Q ss_pred             HHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          309 PLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       309 ~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .+.+||.+||..||.+|||+.+++++
T Consensus       277 ~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          277 ELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=1.5e-46  Score=357.82  Aligned_cols=258  Identities=21%  Similarity=0.324  Sum_probs=208.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEE----EcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVK----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~----~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      ...+....|++++.||+|+||.||+|+    +..+++.||+|++....            .......+.+|+.+|+.++|
T Consensus        15 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h   82 (302)
T 4e5w_A           15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES------------GGNHIADLKKEIEILRNLYH   82 (302)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----------------CCHHHHHHHHHHHHTCCC
T ss_pred             hhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc------------cchhHHHHHHHHHHHHhCCC
Confidence            344556679999999999999999999    57789999999985432            11234678889999999999


Q ss_pred             CCcceeeeeeecC--CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           86 PLLPRLRGVLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        86 p~iv~l~~~~~~~--~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      |||+++++++..+  ..+|+||||++|++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus        83 ~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~  161 (302)
T 4e5w_A           83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES  161 (302)
T ss_dssp             TTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             CCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcC
Confidence            9999999999876  77999999999999999986554 45999999999999999999999999999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++.+||+|||++.........                                                     ......
T Consensus       162 ~~~~kl~Dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~  188 (302)
T 4e5w_A          162 EHQVKIGDFGLTKAIETDKEY-----------------------------------------------------YTVKDD  188 (302)
T ss_dssp             TTEEEECCCTTCEECCTTCCE-----------------------------------------------------EECCCC
T ss_pred             CCCEEECcccccccccCCCcc-----------------------------------------------------eeccCC
Confidence            999999999999876432100                                                     011223


Q ss_pred             cccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC--------------HHHHHHHHh---cCCCCCCCC
Q 014344          244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS--------------RKETFYRIL---CRPPDLVGE  306 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--------------~~~~~~~i~---~~~~~~~~~  306 (426)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|..|+....              ........+   ...+.....
T Consensus       189 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (302)
T 4e5w_A          189 RDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNC  268 (302)
T ss_dssp             TTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTC
T ss_pred             CCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCC
Confidence            458889999999999999999999999999999999998864321              112222222   122334466


Q ss_pred             CHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          307 PTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       307 ~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +..+.+||.+||..||.+|||+.++++
T Consensus       269 ~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          269 PDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            889999999999999999999999985

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=6.9e-47  Score=356.21  Aligned_cols=248  Identities=21%  Similarity=0.337  Sum_probs=206.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.++.++|++++.||+|+||+||+|.+  +++.||+|++...               ...+.+.+|+.+++.++||||+
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---------------~~~~~~~~E~~~l~~l~h~~iv   77 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND---------------ATAQAFLAEASVMTQLRHSNLV   77 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC---------------C--HHHHHTHHHHTTCCCTTBC
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch---------------hHHHHHHHHHHHHHhCCCCCEe
Confidence            4568889999999999999999999986  4889999998432               1345788899999999999999


Q ss_pred             eeeeeeec-CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           90 RLRGVLST-DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        90 ~l~~~~~~-~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++.. ...+|+||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~  157 (278)
T 1byg_A           78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK  157 (278)
T ss_dssp             CEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred             eEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEE
Confidence            99998654 45799999999999999998766544589999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++......                                                           .....+|+
T Consensus       158 l~Dfg~~~~~~~~-----------------------------------------------------------~~~~~~~~  178 (278)
T 1byg_A          158 VSDFGLTKEASST-----------------------------------------------------------QDTGKLPV  178 (278)
T ss_dssp             ECCCCC-----------------------------------------------------------------------CCT
T ss_pred             Eeecccccccccc-----------------------------------------------------------ccCCCccc
Confidence            9999998754211                                                           11224788


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      .|+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+...  .......++.+.++|.+||..||.+|
T Consensus       179 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  258 (278)
T 1byg_A          179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR  258 (278)
T ss_dssp             TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhC
Confidence            9999999999999999999999999999998 99999988877766666533  23344668899999999999999999


Q ss_pred             CChHHHhc
Q 014344          326 IGVEEIKG  333 (426)
Q Consensus       326 ~s~~eil~  333 (426)
                      ||+.++++
T Consensus       259 ps~~~l~~  266 (278)
T 1byg_A          259 PSFLQLRE  266 (278)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            99999975

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.9e-47  Score=363.39  Aligned_cols=257  Identities=21%  Similarity=0.341  Sum_probs=212.2

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEE-----cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CC
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKD-----VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EH   85 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~-----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h   85 (426)
                      .+..++|++++.||+|+||+||+|++     ..+++.||||++....            .....+.+.+|+.+++.+ .|
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~~h   90 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA------------THSEHRALMSELKILIHIGHH   90 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC------------CHHHHHHHHHHHHHHHHHCCC
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC------------CcHHHHHHHHHHHHHHhcccC
Confidence            46678999999999999999999985     3567899999985432            122346788899999999 68


Q ss_pred             CCcceeeeeeecCC-eEEEEEeccCCCChHHHHHHhcc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCc
Q 014344           86 PLLPRLRGVLSTDK-FVGYAIDYCPGRDLHSLRKQQSE--------------QMFSDDTIRFYAAELVLALEYLHNMGIV  150 (426)
Q Consensus        86 p~iv~l~~~~~~~~-~~~lV~Ey~~gg~L~~l~~~~~~--------------~~l~~~~~~~~~~qil~aL~~LH~~gii  150 (426)
                      |||+++++++...+ .+|+|||||+|++|.+++.....              ..+++..+..++.||+.||.|||++||+
T Consensus        91 p~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~  170 (316)
T 2xir_A           91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI  170 (316)
T ss_dssp             TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            99999999987654 59999999999999999875432              1288999999999999999999999999


Q ss_pred             ccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCC
Q 014344          151 YRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPP  230 (426)
Q Consensus       151 HrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (426)
                      ||||||+|||++.++.+||+|||++........                                               
T Consensus       171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----------------------------------------------  203 (316)
T 2xir_A          171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPD-----------------------------------------------  203 (316)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT-----------------------------------------------
T ss_pred             cccCccceEEECCCCCEEECCCccccccccCcc-----------------------------------------------
Confidence            999999999999999999999999986532110                                               


Q ss_pred             CCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh-c--CCCCCCCC
Q 014344          231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRIL-C--RPPDLVGE  306 (426)
Q Consensus       231 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~-~--~~~~~~~~  306 (426)
                             ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+ .  ........
T Consensus       204 -------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (316)
T 2xir_A          204 -------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT  276 (316)
T ss_dssp             -------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTC
T ss_pred             -------ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCC
Confidence                   112234468999999999999999999999999999999998 999998876444333332 2  22233456


Q ss_pred             CHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          307 PTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       307 ~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ++.+.++|.+||..||.+|||+.++++|
T Consensus       277 ~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          277 TPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8899999999999999999999999986

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-46  Score=355.69  Aligned_cols=258  Identities=20%  Similarity=0.230  Sum_probs=215.9

Q ss_pred             CCCCCCCcEEEe-eecccCceEEEEEEEc--CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           11 RSLDFSCLRIVS-ALGRGAKGVVFLVKDV--ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~-~LG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ..++.++|.++. .||+|+||.||+|.+.  .++..||||++....            .....+.+.+|+.+++.++|||
T Consensus         4 ~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~   71 (287)
T 1u59_A            4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT------------EKADTEEMMREAQIMHQLDNPY   71 (287)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC------------CHHHHHHHHHHHHHHHHCCCTT
T ss_pred             ccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc------------chhHHHHHHHHHHHHHhCCCCC
Confidence            346678899998 9999999999999864  467889999985421            2234567889999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |+++++++ ..+..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        72 i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~  149 (287)
T 1u59_A           72 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA  149 (287)
T ss_dssp             BCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEE
T ss_pred             EeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCE
Confidence            99999999 456689999999999999987643 3459999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++.........                                                     ........||
T Consensus       150 kl~Dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~  176 (287)
T 1u59_A          150 KISDFGLSKALGADDSY-----------------------------------------------------YTARSAGKWP  176 (287)
T ss_dssp             EECCCTTCEECTTCSCE-----------------------------------------------------ECCCCSSCCC
T ss_pred             EECcccceeeeccCcce-----------------------------------------------------eecccccccc
Confidence            99999999876422100                                                     0011223478


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.|+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+...  +......+..+.+||.+||..||.+
T Consensus       177 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  256 (287)
T 1u59_A          177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWED  256 (287)
T ss_dssp             GGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred             ccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhh
Confidence            99999999998889999999999999999998 99999998877776666543  2334567899999999999999999


Q ss_pred             CCChHHHhcCC
Q 014344          325 RIGVEEIKGHE  335 (426)
Q Consensus       325 R~s~~eil~hp  335 (426)
                      ||++.++++|.
T Consensus       257 Rps~~~l~~~l  267 (287)
T 1u59_A          257 RPDFLTVEQRM  267 (287)
T ss_dssp             SCCHHHHHHHH
T ss_pred             CcCHHHHHHHH
Confidence            99999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.7e-47  Score=380.42  Aligned_cols=258  Identities=27%  Similarity=0.392  Sum_probs=199.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~   92 (426)
                      .-.+|++.+.||+|+||+||. ....+++.||||++.+..                ...+.+|+.+|+.+ +||||++++
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~----------------~~~~~~E~~~l~~l~~HpnIv~l~   84 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC----------------FSFADREVQLLRESDEHPNVIRYF   84 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT----------------EEECHHHHHHHHHSCCCTTBCCEE
T ss_pred             ccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH----------------HHHHHHHHHHHHhccCCCCcCeEE
Confidence            334699999999999999764 455789999999985421                12345699999999 799999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---CC--cE
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---NG--HI  167 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~g--~i  167 (426)
                      +++.+...+|+|||||. |+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.   ++  .+
T Consensus        85 ~~~~~~~~~~lv~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~  162 (432)
T 3p23_A           85 CTEKDRQFQYIAIELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKA  162 (432)
T ss_dssp             EEEEETTEEEEEEECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCE
T ss_pred             EEEecCCEEEEEEECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeE
Confidence            99999999999999996 69999887554 33566677889999999999999999999999999999953   23  57


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||+++.+.....                                                     ........+||
T Consensus       163 kL~DFG~a~~~~~~~~-----------------------------------------------------~~~~~~~~~gt  189 (432)
T 3p23_A          163 MISDFGLCKKLAVGRH-----------------------------------------------------SFSRRSGVPGT  189 (432)
T ss_dssp             EECCTTEEECC-----------------------------------------------------------------CCSC
T ss_pred             EEecccceeeccCCCc-----------------------------------------------------ceeeccccCCC
Confidence            8999999987642110                                                     01123345799


Q ss_pred             CCCccchhhc---CCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCCCCC----CCCHHHHHHHHHHhc
Q 014344          248 EEYVAPEIIE---GKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRPPDLV----GEPTPLRNLIRRLLE  319 (426)
Q Consensus       248 ~~y~aPE~~~---~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~li~~~L~  319 (426)
                      +.|+|||++.   +..++.++|||||||++|+|++ |..||...........+........    ..+..+.+||.+||+
T Consensus       190 ~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  269 (432)
T 3p23_A          190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIA  269 (432)
T ss_dssp             TTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSC
T ss_pred             cCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHh
Confidence            9999999998   4567889999999999999999 9999976655443322221111111    113457899999999


Q ss_pred             cCCCCCCChHHHhcCCCcCCCChh
Q 014344          320 KDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       320 ~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                      .||.+|||++++++||||..++|.
T Consensus       270 ~dP~~Rps~~evl~hp~f~~~~~~  293 (432)
T 3p23_A          270 MDPQKRPSAKHVLKHPFFWSLEKQ  293 (432)
T ss_dssp             SSGGGSCCHHHHHTSTTTCCHHHH
T ss_pred             CCHhhCCCHHHHHhCccccChHHH
Confidence            999999999999999999988774

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.7e-46  Score=355.97  Aligned_cols=256  Identities=20%  Similarity=0.261  Sum_probs=212.2

Q ss_pred             CCCCCCCcEEEe-eecccCceEEEEEEE--cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           11 RSLDFSCLRIVS-ALGRGAKGVVFLVKD--VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~-~LG~G~~g~V~~a~~--~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ..++.++|++.+ .||+|+||+||+|.+  ..+++.||||++.....           .....+.+.+|+.+++.++|||
T Consensus        11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~   79 (291)
T 1xbb_A           11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-----------DPALKDELLAEANVMQQLDNPY   79 (291)
T ss_dssp             CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC----------------CHHHHHHHHHHHHHHTCCCTT
T ss_pred             eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-----------CHHHHHHHHHHHHHHHhCCCCC
Confidence            345667899998 999999999999954  56778999999854321           1234567889999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |+++++++ ..+..|+||||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        80 i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~  156 (291)
T 1xbb_A           80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA  156 (291)
T ss_dssp             BCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred             EEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcE
Confidence            99999999 567789999999999999998764  349999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++.........                                                     ........||
T Consensus       157 kl~Dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~  183 (291)
T 1xbb_A          157 KISDFGLSKALRADENY-----------------------------------------------------YKAQTHGKWP  183 (291)
T ss_dssp             EECCCTTCEECCTTCSE-----------------------------------------------------EEC----CCC
T ss_pred             EEccCCcceeeccCCCc-----------------------------------------------------ccccccCCCC
Confidence            99999999866422100                                                     0011123478


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....+...  +......+..+.++|.+||..||.+
T Consensus       184 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  263 (291)
T 1xbb_A          184 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN  263 (291)
T ss_dssp             GGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTT
T ss_pred             ceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence            89999999999889999999999999999999 99999998887776665533  2333466889999999999999999


Q ss_pred             CCChHHHhc
Q 014344          325 RIGVEEIKG  333 (426)
Q Consensus       325 R~s~~eil~  333 (426)
                      |||+.++++
T Consensus       264 Rps~~~l~~  272 (291)
T 1xbb_A          264 RPGFAAVEL  272 (291)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999986

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.6e-47  Score=379.16  Aligned_cols=253  Identities=26%  Similarity=0.384  Sum_probs=206.5

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ..-++|++.+.||+|+||+||+|++..+++.||||++......            .....+.+|+.+|+.++||||++++
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~~~   73 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL------------RPVDVQMREFEVLKKLNHKNIVKLF   73 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG------------SCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc------------chHHHHHHHHHHHHhcCCCCCCeEE
Confidence            3446799999999999999999999999999999999643221            1245677899999999999999999


Q ss_pred             eeeecCC--eEEEEEeccCCCChHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee----ccCC
Q 014344           93 GVLSTDK--FVGYAIDYCPGRDLHSLRKQQSE-QMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI----QENG  165 (426)
Q Consensus        93 ~~~~~~~--~~~lV~Ey~~gg~L~~l~~~~~~-~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl----~~~g  165 (426)
                      +++....  ..|+|||||+||+|.+++..... ..+++..++.++.||+.||+|||++||+||||||+|||+    +.++
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~  153 (396)
T 4eut_A           74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQS  153 (396)
T ss_dssp             EEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCE
T ss_pred             EeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCce
Confidence            9998655  78999999999999998765432 339999999999999999999999999999999999999    7778


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||++......                                                         ......+
T Consensus       154 ~~kL~DFG~a~~~~~~---------------------------------------------------------~~~~~~~  176 (396)
T 4eut_A          154 VYKLTDFGAARELEDD---------------------------------------------------------EQFVSLY  176 (396)
T ss_dssp             EEEECCGGGCEECCCG---------------------------------------------------------GGSSCSS
T ss_pred             eEEEecCCCceEccCC---------------------------------------------------------Ccccccc
Confidence            8999999999765321                                                         1123456


Q ss_pred             cCCCCccchhhcC--------CCCChhhHHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHhcCCCCC----------
Q 014344          246 GTEEYVAPEIIEG--------KGHDFAVDWWSLGVVLHEMLYGATPFRGS----SRKETFYRILCRPPDL----------  303 (426)
Q Consensus       246 gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~ell~g~~pf~~~----~~~~~~~~i~~~~~~~----------  303 (426)
                      ||+.|+|||++.+        ..++.++|||||||++|+|++|+.||...    ...+...+++...+..          
T Consensus       177 gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (396)
T 4eut_A          177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN  256 (396)
T ss_dssp             SCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTT
T ss_pred             CCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccC
Confidence            9999999999875        56788999999999999999999999642    3345555555433210          


Q ss_pred             ----------------CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          304 ----------------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       304 ----------------~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                                      ...+..+.+||++||+.||++|||+++++++
T Consensus       257 ~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          257 GPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             CCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             CCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence                            0113467899999999999999999998654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2.2e-46  Score=366.91  Aligned_cols=268  Identities=18%  Similarity=0.243  Sum_probs=204.5

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCC-----CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVES-----SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      +..++|++++.||+|+||+||+|.+..+     ++.||||++......... +... ........+..|+..++.+.|||
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-e~~~-~~~~~~~~~~~e~~~~~~l~h~~  109 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFT-ELKF-YQRAAKPEQIQKWIRTRKLKYLG  109 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHH-HHHH-HHHHCCHHHHHHHHHHTTCSCCC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHH-HHHH-HHhhhhhHHHHHHHHHhhccCCC
Confidence            4456899999999999999999998764     588999998654321110 0000 00001123555777888899999


Q ss_pred             cceeeeeeecC----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec-
Q 014344           88 LPRLRGVLSTD----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ-  162 (426)
Q Consensus        88 iv~l~~~~~~~----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~-  162 (426)
                      |+++++++...    ...|+||||| |++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ 
T Consensus       110 iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          110 VPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES
T ss_pred             CCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec
Confidence            99999998764    5689999999 999999987643 4599999999999999999999999999999999999999 


Q ss_pred             -cCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          163 -ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       163 -~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                       .++.+||+|||+++.+.......                                                 .......
T Consensus       188 ~~~~~~kl~DFG~a~~~~~~~~~~-------------------------------------------------~~~~~~~  218 (364)
T 3op5_A          188 KNPDQVYLVDYGLAYRYCPEGVHK-------------------------------------------------AYAADPK  218 (364)
T ss_dssp             SCTTCEEECCCTTCEESSGGGCCC-------------------------------------------------CSSCCSS
T ss_pred             CCCCeEEEEECCcceecccCCccc-------------------------------------------------ccccCcc
Confidence             88999999999998764221100                                                 0011123


Q ss_pred             cccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------------hcCCCCCCCCCHH
Q 014344          242 NSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------------LCRPPDLVGEPTP  309 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i------------~~~~~~~~~~~~~  309 (426)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+......+...            +.........+..
T Consensus       219 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (364)
T 3op5_A          219 RCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGE  298 (364)
T ss_dssp             CCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHH
T ss_pred             cccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHH
Confidence            4557999999999999999999999999999999999999999864322211111            1111112456889


Q ss_pred             HHHHHHHHhccCCCCCCChHHHhc
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+||..||..||.+||++++|++
T Consensus       299 ~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          299 IAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCCHHHHHH
Confidence            999999999999999999998864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1e-46  Score=379.65  Aligned_cols=253  Identities=22%  Similarity=0.300  Sum_probs=212.2

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.+..++|++.+.||+|+||.||+|.+.. +..||||++....              ...+.+.+|+.+|++++||||+
T Consensus       178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~hp~iv  242 (452)
T 1fmk_A          178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT--------------MSPEAFLQEAQVMKKLRHEKLV  242 (452)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS--------------SCHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC--------------CCHHHHHHHHHHHHhCCCCCEe
Confidence            456778899999999999999999999865 4679999985421              1235688899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.. +.+|+|||||++|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus       243 ~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl  321 (452)
T 1fmk_A          243 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV  321 (452)
T ss_dssp             CEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             eEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEE
Confidence            99999866 77899999999999999987655556999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.......                                                       .......+|+.
T Consensus       322 ~DfG~a~~~~~~~~-------------------------------------------------------~~~~~~~~~~~  346 (452)
T 1fmk_A          322 ADFGLARLIEDNEY-------------------------------------------------------TARQGAKFPIK  346 (452)
T ss_dssp             CCCCTTC---------------------------------------------------------------------CCGG
T ss_pred             CCCccceecCCCce-------------------------------------------------------ecccCCccccc
Confidence            99999976532110                                                       01112347888


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+...  .+.....+..+.+||.+||..||++||
T Consensus       347 y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  426 (452)
T 1fmk_A          347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERP  426 (452)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence            999999999999999999999999999999 99999999888877776543  233456788999999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      |+++|++
T Consensus       427 t~~~l~~  433 (452)
T 1fmk_A          427 TFEYLQA  433 (452)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999986

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1e-46  Score=363.53  Aligned_cols=261  Identities=20%  Similarity=0.298  Sum_probs=212.4

Q ss_pred             CCCCCCCCCCCcEEEeeecccCceEEEEEE----EcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh
Q 014344            7 DRPIRSLDFSCLRIVSALGRGAKGVVFLVK----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN   82 (426)
Q Consensus         7 ~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~----~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~   82 (426)
                      .....-++.++|++++.||+|+||.||+|+    +..+++.||||++....             ....+.+.+|+.+++.
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~   80 (327)
T 3lxl_A           14 CQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-------------PDQQRDFQREIQILKA   80 (327)
T ss_dssp             ---CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-------------HHHHHHHHHHHHHHHT
T ss_pred             cChhhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-------------HHHHHHHHHHHHHHHh
Confidence            334455777899999999999999999999    56789999999985431             2334678899999999


Q ss_pred             cCCCCcceeeeeee--cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCee
Q 014344           83 VEHPLLPRLRGVLS--TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIM  160 (426)
Q Consensus        83 l~hp~iv~l~~~~~--~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiL  160 (426)
                      ++||||+++++++.  ....+|+|||||+|++|.+++..... .+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        81 l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl  159 (327)
T 3lxl_A           81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL  159 (327)
T ss_dssp             CCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             cCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEE
Confidence            99999999999886  56779999999999999999876543 4999999999999999999999999999999999999


Q ss_pred             eccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          161 IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       161 l~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                      ++.++.+||+|||++........                                                     ....
T Consensus       160 ~~~~~~~kl~Dfg~~~~~~~~~~-----------------------------------------------------~~~~  186 (327)
T 3lxl_A          160 VESEAHVKIADFGLAKLLPLDKD-----------------------------------------------------YYVV  186 (327)
T ss_dssp             EEETTEEEECCGGGCEECCTTCS-----------------------------------------------------EEEC
T ss_pred             ECCCCCEEEcccccceecccCCc-----------------------------------------------------ccee
Confidence            99999999999999987642110                                                     0011


Q ss_pred             ccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---------------HHHHHHh--cCCCCC
Q 014344          241 SNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---------------ETFYRIL--CRPPDL  303 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---------------~~~~~i~--~~~~~~  303 (426)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......               .....+.  ...+..
T Consensus       187 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (327)
T 3lxl_A          187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAP  266 (327)
T ss_dssp             SSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCC
T ss_pred             eccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCC
Confidence            22345889999999999999999999999999999999999999654432               1111111  123334


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ...+..+.+||.+||+.||.+|||+.+++++
T Consensus       267 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          267 PACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4668899999999999999999999999654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.4e-46  Score=354.06  Aligned_cols=253  Identities=19%  Similarity=0.282  Sum_probs=213.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.+..++|++++.||+|+||.||+|.+. +++.||+|++....              ...+.+.+|+.+|+.++||||+
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~h~~i~   71 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS--------------MSPDAFLAEANLMKQLQHQRLV   71 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS--------------SCHHHHHHHHHHHHHCCCTTBC
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc--------------ccHHHHHHHHHHHHhCCCcCcc
Confidence            35677889999999999999999999975 56789999984321              1235688899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++. ++..|+||||++|++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        72 ~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl  150 (279)
T 1qpc_A           72 RLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI  150 (279)
T ss_dssp             CEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             eEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEE
Confidence            9999986 456899999999999999876544335999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||++........                                                       .......+|+.
T Consensus       151 ~Dfg~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~  175 (279)
T 1qpc_A          151 ADFGLARLIEDNEY-------------------------------------------------------TAREGAKFPIK  175 (279)
T ss_dssp             CCCTTCEECSSSCE-------------------------------------------------------ECCTTCCCCTT
T ss_pred             CCCcccccccCccc-------------------------------------------------------ccccCCCCccC
Confidence            99999976532110                                                       01122347889


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....+...  .......+..+.+||.+||..||++||
T Consensus       176 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  255 (279)
T 1qpc_A          176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRP  255 (279)
T ss_dssp             TSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCC
Confidence            999999998889999999999999999999 99999998887777666543  233345688999999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      |++++++
T Consensus       256 s~~~l~~  262 (279)
T 1qpc_A          256 TFDYLRS  262 (279)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999986

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=4.1e-46  Score=353.43  Aligned_cols=264  Identities=19%  Similarity=0.323  Sum_probs=207.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee-e
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG-V   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~-~   94 (426)
                      ++|++++.||+|+||+||+|++..+++.||||++....               ....+..|+.+++.+.|++++..+. +
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~e~~~l~~l~~~~~i~~~~~~   73 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---------------KHPQLHIESKIYKMMQGGVGIPTIRWC   73 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------------------CCCHHHHHHHHHHHTTSTTCCCEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc---------------cchHHHHHHHHHHHhcCCCCCCeeeee
Confidence            57999999999999999999999999999999864321               1235777999999999877665554 4


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee---ccCCcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI---QENGHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl---~~~g~ikL~D  171 (426)
                      +......++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        74 ~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~D  151 (296)
T 4hgt_A           74 GAEGDYNVMVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIID  151 (296)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred             cCCCCceEEEEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEec
Confidence            57788999999999 999999987543 459999999999999999999999999999999999999   7899999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++...........                                                 ..........||+.|+
T Consensus       152 fg~a~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~gt~~y~  182 (296)
T 4hgt_A          152 FGLAKKYRDARTHQH-------------------------------------------------IPYRENKNLTGTARYA  182 (296)
T ss_dssp             CTTCEECBCTTTCCB-------------------------------------------------CCCCCSCCCCSCGGGC
T ss_pred             CccceeccCcccCcc-------------------------------------------------CCCCcccccCCCcccc
Confidence            999987643211000                                                 0011234557999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH----hcCCC--CCCCCCHHHHHHHHHHhccCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRI----LCRPP--DLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~i----~~~~~--~~~~~~~~~~~li~~~L~~dP  322 (426)
                      |||++.+..++.++|||||||++|+|++|+.||.+.+..   ..+..+    ...+.  .....+..+.+||.+||+.||
T Consensus       183 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  262 (296)
T 4hgt_A          183 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRF  262 (296)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCT
T ss_pred             chHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999874321   112221    11111  113457899999999999999


Q ss_pred             CCCCChHHHhc----------CCCcCCCChhhh
Q 014344          323 TKRIGVEEIKG----------HEFFKGVNWELL  345 (426)
Q Consensus       323 ~~R~s~~eil~----------hp~f~~~~~~~~  345 (426)
                      ++|||++++++          .+|-..++|+.+
T Consensus       263 ~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~~  295 (296)
T 4hgt_A          263 DDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML  295 (296)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred             CCCCCHHHHHHHHHHHHHHhCCCccCccchhhc
Confidence            99999998875          345555566543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=6e-46  Score=355.32  Aligned_cols=256  Identities=27%  Similarity=0.380  Sum_probs=202.6

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ..+.+|++++.||+|+||.||+|.+..+++.||||++.....          ........+.+|+.+++.++||||++++
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~E~~~l~~l~h~~i~~~~   98 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL----------MDAKARADCIKEIDLLKQLNHPNVIKYY   98 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS----------CCHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc----------cCHHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            456789999999999999999999999999999999854211          1223456788899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++..++..++||||+.+++|.+++...  ....+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+
T Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~  178 (310)
T 2wqm_A           99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLG  178 (310)
T ss_dssp             EEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC
T ss_pred             EEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEE
Confidence            9999999999999999999999987643  34569999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++.......                                                        .......||+.|
T Consensus       179 Dfg~~~~~~~~~--------------------------------------------------------~~~~~~~~~~~y  202 (310)
T 2wqm_A          179 DLGLGRFFSSKT--------------------------------------------------------TAAHSLVGTPYY  202 (310)
T ss_dssp             CC--------------------------------------------------------------------------CCSS
T ss_pred             eccceeeecCCC--------------------------------------------------------ccccccCCCeeE
Confidence            999987653211                                                        112234689999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcC--CC-CCCCCCHHHHHHHHHHhccCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS--RKETFYRILCR--PP-DLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~i~~~--~~-~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      +|||++.+..++.++|||||||++|+|++|..||.+..  .......+...  ++ .....+..+.+||.+||..||.+|
T Consensus       203 ~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  282 (310)
T 2wqm_A          203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR  282 (310)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             eChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhC
Confidence            99999999999999999999999999999999997643  23333333322  11 123568899999999999999999


Q ss_pred             CChHHHhcC
Q 014344          326 IGVEEIKGH  334 (426)
Q Consensus       326 ~s~~eil~h  334 (426)
                      ||+.+++++
T Consensus       283 ps~~~il~~  291 (310)
T 2wqm_A          283 PDVTYVYDV  291 (310)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=2.4e-46  Score=375.12  Aligned_cols=258  Identities=24%  Similarity=0.361  Sum_probs=194.0

Q ss_pred             CCCCCCC-cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCc
Q 014344           11 RSLDFSC-LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLL   88 (426)
Q Consensus        11 ~~l~~~~-y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i   88 (426)
                      .+..+.+ |.+.+.||+|+||+||.+ ...+|+.||||++....                ...+.+|+.+|+.+ +||||
T Consensus         9 ~~~~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~----------------~~~~~~E~~~l~~l~~HpnI   71 (434)
T 2rio_A            9 FEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF----------------CDIALMEIKLLTESDDHPNV   71 (434)
T ss_dssp             CSCSCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG----------------HHHHHHHHHHHHHHTTSTTB
T ss_pred             hhhhhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH----------------HHHHHHHHHHHHhccCCCCc
Confidence            3344444 455688999999999875 45679999999985431                23567799999876 89999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCC-----CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM-----FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~-----l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      +++++++.+++.+|+|||||. |+|.+++.......     .++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus        72 v~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~  150 (434)
T 2rio_A           72 IRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST  150 (434)
T ss_dssp             CCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEC
T ss_pred             CeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence            999999999999999999996 69999987543211     123345679999999999999999999999999999975


Q ss_pred             C-------------CcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCC
Q 014344          164 N-------------GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPP  230 (426)
Q Consensus       164 ~-------------g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (426)
                      +             +.+||+|||++..+......                                              
T Consensus       151 ~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~----------------------------------------------  184 (434)
T 2rio_A          151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSS----------------------------------------------  184 (434)
T ss_dssp             CHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------------------------------------------
T ss_pred             CcccccccccCCCceEEEEcccccceecCCCCcc----------------------------------------------
Confidence            4             48999999999876432100                                              


Q ss_pred             CCCCCCCCCCccccccCCCCccchhhcC-------CCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--
Q 014344          231 SRSDSDSSEKSNSFVGTEEYVAPEIIEG-------KGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--  300 (426)
Q Consensus       231 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--  300 (426)
                            ........+||+.|+|||++.+       ..++.++|||||||++|||++ |..||......+.  .++...  
T Consensus       185 ------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i~~~~~~  256 (434)
T 2rio_A          185 ------FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIFS  256 (434)
T ss_dssp             ----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HHHHTCCC
T ss_pred             ------ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HHhcCCCC
Confidence                  0011234579999999999976       568999999999999999998 9999987654432  222211  


Q ss_pred             -CCCC-----CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          301 -PDLV-----GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       301 -~~~~-----~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                       +...     ..+..+.+||.+||+.||.+|||+.++++||||...
T Consensus       257 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          257 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence             1111     123678999999999999999999999999999653

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=5.5e-46  Score=353.42  Aligned_cols=254  Identities=19%  Similarity=0.265  Sum_probs=206.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCC---ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESS---ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~---~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ..+|++.+.||+|+||+||+|++..++   ..+|+|++...            ......+.+.+|+.++++++||||+++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~------------~~~~~~~~~~~E~~~l~~l~h~~iv~~   91 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI------------TDIGEVSQFLTEGIIMKDFSHPNVLSL   91 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC------------CSHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC------------CCHHHHHHHHHHHHHHHhCCCCCEeee
Confidence            446999999999999999999976443   35899988432            122345678899999999999999999


Q ss_pred             eeee-ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           92 RGVL-STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        92 ~~~~-~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ++++ ..++..|+|||||.|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        92 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~  170 (298)
T 3f66_A           92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA  170 (298)
T ss_dssp             CEEECCSSSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred             eeEEEcCCCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEEC
Confidence            9985 56678899999999999999986543 458999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++.........                                                    .........||+.|
T Consensus       171 Dfg~a~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y  198 (298)
T 3f66_A          171 DFGLARDMYDKEYY----------------------------------------------------SVHNKTGAKLPVKW  198 (298)
T ss_dssp             SCGGGCCCSCGGGC----------------------------------------------------BC-----CCBCGGG
T ss_pred             cccccccccccchh----------------------------------------------------ccccccCCCCCccc
Confidence            99999865421100                                                    01122334588999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP--PDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      +|||++.+..++.++|||||||++|+|++ |.+||.+.+..+....+....  ......+..+.++|.+||..||.+|||
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  278 (298)
T 3f66_A          199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS  278 (298)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcC
Confidence            99999999999999999999999999999 778888777666655554332  223456888999999999999999999


Q ss_pred             hHHHhc
Q 014344          328 VEEIKG  333 (426)
Q Consensus       328 ~~eil~  333 (426)
                      +.++++
T Consensus       279 ~~ell~  284 (298)
T 3f66_A          279 FSELVS  284 (298)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.4e-45  Score=351.13  Aligned_cols=246  Identities=26%  Similarity=0.454  Sum_probs=200.2

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ..++.++|++.+.||+|+||+||+|++.  ++.||||++...               ...+.+..|+.+|+.++||||++
T Consensus         3 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---------------~~~~~~~~E~~~l~~l~hp~iv~   65 (307)
T 2eva_A            3 HMIDYKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE---------------SERKAFIVELRQLSRVNHPNIVK   65 (307)
T ss_dssp             CBCCGGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST---------------THHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CcCCHhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh---------------hHHHHHHHHHHHHhcCCCCCcCe
Confidence            3567889999999999999999999874  788999998422               23467888999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCCCCeeeccCCc
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE-QMFSDDTIRFYAAELVLALEYLHN---MGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~-~~l~~~~~~~~~~qil~aL~~LH~---~giiHrDlKp~NiLl~~~g~  166 (426)
                      +++++.+  ..|+||||++|++|.+++..... ..++...+..++.||+.||.|||+   +||+||||||+|||++.++.
T Consensus        66 ~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~  143 (307)
T 2eva_A           66 LYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT  143 (307)
T ss_dssp             EEEBCTT--TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT
T ss_pred             EEEEEcC--CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC
Confidence            9998864  47899999999999999875432 247889999999999999999999   89999999999999998886


Q ss_pred             -EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          167 -IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       167 -ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                       +||+|||++......                                                           .....
T Consensus       144 ~~kl~Dfg~~~~~~~~-----------------------------------------------------------~~~~~  164 (307)
T 2eva_A          144 VLKICDFGTACDIQTH-----------------------------------------------------------MTNNK  164 (307)
T ss_dssp             EEEECCCCC-----------------------------------------------------------------------
T ss_pred             EEEEcccccccccccc-----------------------------------------------------------cccCC
Confidence             799999998754211                                                           11235


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHh--cCCCCCCCCCHHHHHHHHHHhccC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR--KETFYRIL--CRPPDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~--~~~~~~~~~~~~~~~li~~~L~~d  321 (426)
                      ||+.|+|||++.+..++.++|||||||++|+|++|+.||.....  ......+.  ..++.....+..+.+||.+||+.|
T Consensus       165 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  244 (307)
T 2eva_A          165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKD  244 (307)
T ss_dssp             CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSS
T ss_pred             CCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999999999999986432  22222222  223334567889999999999999


Q ss_pred             CCCCCChHHHhcC
Q 014344          322 PTKRIGVEEIKGH  334 (426)
Q Consensus       322 P~~R~s~~eil~h  334 (426)
                      |.+|||+++++++
T Consensus       245 p~~Rps~~ell~~  257 (307)
T 2eva_A          245 PSQRPSMEEIVKI  257 (307)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999873

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.4e-46  Score=356.13  Aligned_cols=248  Identities=22%  Similarity=0.295  Sum_probs=195.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh--cCCCCcce
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN--VEHPLLPR   90 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~iv~   90 (426)
                      .-.++|++++.||+|+||+||+|++  +++.||||++....                ...+..|.+++..  ++||||++
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~----------------~~~~~~e~~~~~~~~l~h~niv~   66 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD----------------EKSWFRETELYNTVMLRHENILG   66 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG----------------HHHHHHHHHHHHHTCCCCTTBCC
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc----------------chhhHHHHHHHHHhhccCcCeee
Confidence            3456799999999999999999987  68999999985431                2344556777766  78999999


Q ss_pred             eeeeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH--------HCCCcccCCCCCC
Q 014344           91 LRGVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH--------NMGIVYRDLKPEN  158 (426)
Q Consensus        91 l~~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH--------~~giiHrDlKp~N  158 (426)
                      +++++..    ...+|+|||||++|+|.++++.   ..+++..+..++.||+.||+|||        ++||+||||||+|
T Consensus        67 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~N  143 (301)
T 3q4u_A           67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN  143 (301)
T ss_dssp             EEEEEEEEETTEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGG
T ss_pred             EEEeeccccCCCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHh
Confidence            9998643    4568999999999999999853   35999999999999999999999        9999999999999


Q ss_pred             eeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          159 IMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSS  238 (426)
Q Consensus       159 iLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (426)
                      ||++.++.+||+|||++.........                                                    ..
T Consensus       144 ill~~~~~~kl~Dfg~a~~~~~~~~~----------------------------------------------------~~  171 (301)
T 3q4u_A          144 ILVKKNGQCCIADLGLAVMHSQSTNQ----------------------------------------------------LD  171 (301)
T ss_dssp             EEECTTSCEEECCCTTCEEEETTTTE----------------------------------------------------EE
T ss_pred             EEEcCCCCEEEeeCCCeeeccccccc----------------------------------------------------cc
Confidence            99999999999999998765321100                                                    00


Q ss_pred             CCccccccCCCCccchhhcCC------CCChhhHHHHHHHHHHHHHhC----------CCCCCCCC----HHHHHHHHhc
Q 014344          239 EKSNSFVGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYG----------ATPFRGSS----RKETFYRILC  298 (426)
Q Consensus       239 ~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~ell~g----------~~pf~~~~----~~~~~~~i~~  298 (426)
                      ......+||+.|+|||++.+.      .++.++|||||||++|||++|          ..||....    ..........
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~  251 (301)
T 3q4u_A          172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC  251 (301)
T ss_dssp             CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT
T ss_pred             ccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHh
Confidence            112344799999999999876      455799999999999999999          88986532    2233333332


Q ss_pred             CCCCCCC---------CCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          299 RPPDLVG---------EPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       299 ~~~~~~~---------~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .......         .+..+.+||.+||+.||++|||+.+|++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          252 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             TSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            2111111         2356899999999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-45  Score=350.28  Aligned_cols=253  Identities=21%  Similarity=0.288  Sum_probs=207.3

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCc---eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSE---SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .|++.+.||+|+||+||+|++..+++   .||+|++...            ......+.+.+|+.+++.++||||+++++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   89 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI------------TEMQQVEAFLREGLLMRGLNHPNVLALIG   89 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC------------CSHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc------------ccHHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence            46778999999999999999765554   7999998432            12234567889999999999999999999


Q ss_pred             eeecCCeE-EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           94 VLSTDKFV-GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        94 ~~~~~~~~-~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++.+.+.. ++||||+.+++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus        90 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Df  168 (298)
T 3pls_A           90 IMLPPEGLPHVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADF  168 (298)
T ss_dssp             EECCSSSCCEEEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCT
T ss_pred             EEecCCCCcEEEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcC
Confidence            99776655 9999999999999998653 345899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |++..+.....                                                    ..........||+.|+|
T Consensus       169 g~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~y~a  196 (298)
T 3pls_A          169 GLARDILDREY----------------------------------------------------YSVQQHRHARLPVKWTA  196 (298)
T ss_dssp             TSSCTTTTGGG----------------------------------------------------GCSCCSSCTTCGGGGSC
T ss_pred             CCcccccCCcc----------------------------------------------------cccccCcCCCCCccccC
Confidence            99976532110                                                    00112234468999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||++.+..++.++|||||||++|+|++ |.+||...+..+....+...  .+.....+..+.+||.+||..||.+|||++
T Consensus       197 PE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~  276 (298)
T 3pls_A          197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFR  276 (298)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHH
Confidence            999999999999999999999999999 56667666665555554432  233445688999999999999999999999


Q ss_pred             HHhcC
Q 014344          330 EIKGH  334 (426)
Q Consensus       330 eil~h  334 (426)
                      ++++.
T Consensus       277 ~ll~~  281 (298)
T 3pls_A          277 VLVGE  281 (298)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99863

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.7e-46  Score=363.61  Aligned_cols=268  Identities=16%  Similarity=0.200  Sum_probs=202.7

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcC---CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVE---SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      .+..++|++++.||+|+||+||+|++..   ++..+|||++......... +... ........+..|+.+++.++||||
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~-e~~~-~~~~~~~~~~~e~~~~~~l~h~ni  110 (345)
T 2v62_A           33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS-ELKF-YQRVAKKDCIKKWIERKQLDYLGI  110 (345)
T ss_dssp             CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHH-HHHH-HHHHCCHHHHHHHHHHHTCSCCCC
T ss_pred             cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHH-HHHH-HHHHhhhHHHHHHHhhccccccCc
Confidence            3456789999999999999999999987   7889999998654211100 0000 000112346778999999999999


Q ss_pred             ceeeeeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           89 PRLRGVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        89 v~l~~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      +++++++..    ...+|+||||| |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus       111 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  187 (345)
T 2v62_A          111 PLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK  187 (345)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS
T ss_pred             ceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC
Confidence            999999987    78999999999 999999876554  59999999999999999999999999999999999999988


Q ss_pred             C--cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 014344          165 G--HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSN  242 (426)
Q Consensus       165 g--~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (426)
                      +  .+||+|||+++.+.......                                                 ........
T Consensus       188 ~~~~~kL~Dfg~a~~~~~~~~~~-------------------------------------------------~~~~~~~~  218 (345)
T 2v62_A          188 NPDQVYLADYGLSYRYCPNGNHK-------------------------------------------------QYQENPRK  218 (345)
T ss_dssp             STTSEEECCCTTCEESSGGGCCC-------------------------------------------------CCCCCGGG
T ss_pred             CCCcEEEEeCCCceecccccccc-------------------------------------------------cchhcccc
Confidence            7  99999999998764221000                                                 00011224


Q ss_pred             ccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC--CHHHHHH---HHhcCCCC-------CCCCCHHH
Q 014344          243 SFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS--SRKETFY---RILCRPPD-------LVGEPTPL  310 (426)
Q Consensus       243 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~--~~~~~~~---~i~~~~~~-------~~~~~~~~  310 (426)
                      ..+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.  +......   ......+.       ....+..+
T Consensus       219 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  298 (345)
T 2v62_A          219 GHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEI  298 (345)
T ss_dssp             CSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHH
T ss_pred             ccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHH
Confidence            557999999999999999999999999999999999999999652  2222111   11111111       11568899


Q ss_pred             HHHHHHHhccCCCCCCChHHHhc
Q 014344          311 RNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       311 ~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .+||.+||..||.+|||+++|++
T Consensus       299 ~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          299 AQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhhcCcccCCCHHHHHH
Confidence            99999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.8e-46  Score=362.75  Aligned_cols=252  Identities=19%  Similarity=0.317  Sum_probs=203.6

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCC--------CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVES--------SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH   85 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~--------~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h   85 (426)
                      ..++|++++.||+|+||+||+|++..+        ++.||||++.+.                  ..+.+|+.+++.++|
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------------------~~~~~E~~~l~~l~h  101 (352)
T 2jii_A           40 SGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------------------GRLFNEQNFFQRAAK  101 (352)
T ss_dssp             TSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------------------STHHHHHHHHHHHCC
T ss_pred             cCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------------------chHHHHHHHHHHhcc
Confidence            347899999999999999999999874        889999998432                  356779999999999


Q ss_pred             CCcce---------------eeeeeec-CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014344           86 PLLPR---------------LRGVLST-DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGI  149 (426)
Q Consensus        86 p~iv~---------------l~~~~~~-~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~gi  149 (426)
                      |||++               +++++.. +...|+||||| |++|.+++.......+++..+..++.||+.||.|||++||
T Consensus       102 ~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  180 (352)
T 2jii_A          102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEY  180 (352)
T ss_dssp             HHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99887               5666655 78999999999 9999999987644569999999999999999999999999


Q ss_pred             cccCCCCCCeeeccCC--cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          150 VYRDLKPENIMIQENG--HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       150 iHrDlKp~NiLl~~~g--~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      +||||||+|||++.++  .+||+|||++..+.......                                          
T Consensus       181 vH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~------------------------------------------  218 (352)
T 2jii_A          181 VHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHV------------------------------------------  218 (352)
T ss_dssp             BCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCC------------------------------------------
T ss_pred             cCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccc------------------------------------------
Confidence            9999999999999998  99999999998764221000                                          


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHH---HhcCCCC
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS--RKETFYR---ILCRPPD  302 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~---i~~~~~~  302 (426)
                             ...........||+.|+|||++.+..++.++|||||||++|+|++|+.||....  .......   ....+..
T Consensus       219 -------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  291 (352)
T 2jii_A          219 -------AYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGP  291 (352)
T ss_dssp             -------CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCC
T ss_pred             -------cccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhh
Confidence                   000112234579999999999999999999999999999999999999998764  2222221   1222222


Q ss_pred             C-------CCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          303 L-------VGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       303 ~-------~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .       ...+..+.+||.+||..||.+|||+++|++
T Consensus       292 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          292 FVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             EECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             hhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            1       135789999999999999999999999976

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=8.2e-46  Score=351.56  Aligned_cols=253  Identities=19%  Similarity=0.309  Sum_probs=203.4

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee-
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG-   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~-   93 (426)
                      .++|++++.||+|+||.||+|++..+++.||||++....               ....+..|+.+++.+.|++++..+. 
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~e~~~l~~l~~~~~i~~~~~   72 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---------------KHPQLHIESKIYKMMQGGVGIPTIRW   72 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---------------SCCHHHHHHHHHHHHTTSTTCCCEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---------------chhHHHHHHHHHHHhhcCCCCCcccc
Confidence            367999999999999999999999999999999984321               1235778999999999877655444 


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee---ccCCcEEEe
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI---QENGHIMLV  170 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl---~~~g~ikL~  170 (426)
                      ++......++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+
T Consensus        73 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~  150 (296)
T 3uzp_A           73 CGAEGDYNVMVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYII  150 (296)
T ss_dssp             EEEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEEC
T ss_pred             ccCCCCceEEEEEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEe
Confidence            457788899999999 899999987543 459999999999999999999999999999999999999   488999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++...........                                                 ..........||+.|
T Consensus       151 Dfg~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~gt~~y  181 (296)
T 3uzp_A          151 DFGLAKKYRDARTHQH-------------------------------------------------IPYRENKNLTGTARY  181 (296)
T ss_dssp             CCTTCEECBCTTTCCB-------------------------------------------------CCCCCSCCCCSCTTT
T ss_pred             eCCCcccccccccccc-------------------------------------------------ccccccccccccccc
Confidence            9999987643211000                                                 001123455799999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH----hcCC--CCCCCCCHHHHHHHHHHhccC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRI----LCRP--PDLVGEPTPLRNLIRRLLEKD  321 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i----~~~~--~~~~~~~~~~~~li~~~L~~d  321 (426)
                      +|||++.+..++.++|||||||++|+|++|+.||.+.+.   .+.+..+    ...+  ......+..+.+||.+||+.|
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  261 (296)
T 3uzp_A          182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLR  261 (296)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSC
T ss_pred             CChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999987432   1222222    1111  112356889999999999999


Q ss_pred             CCCCCChHHHhc
Q 014344          322 PTKRIGVEEIKG  333 (426)
Q Consensus       322 P~~R~s~~eil~  333 (426)
                      |.+|||++++++
T Consensus       262 p~~Rps~~~l~~  273 (296)
T 3uzp_A          262 FDDKPDYSYLRQ  273 (296)
T ss_dssp             TTCCCCHHHHHH
T ss_pred             cCcCCCHHHHHH
Confidence            999999999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=3.3e-47  Score=366.11  Aligned_cols=253  Identities=21%  Similarity=0.193  Sum_probs=205.5

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      ..++|++.+.||+|+||+||+|++ .+++.||||++...             .....+.+.+|+.+|+.++||||+++++
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~  102 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE-------------SSQGIEEFETEIETLSFCRHPHLVSLIG  102 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC-------------CSSHHHHHHHHHHGGGSCCCTTBCCEEE
T ss_pred             HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc-------------ChHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            346899999999999999999996 46899999987432             1234567889999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++...+..|+|||||+||+|.+++....  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus       103 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~D  182 (321)
T 2qkw_B          103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITD  182 (321)
T ss_dssp             ECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECC
T ss_pred             EEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEee
Confidence            9999999999999999999999875432  23489999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                      .........||+.|+
T Consensus       183 fg~~~~~~~~~------------------------------------------------------~~~~~~~~~gt~~y~  208 (321)
T 2qkw_B          183 FGISKKGTELD------------------------------------------------------QTHLSTVVKGTLGYI  208 (321)
T ss_dssp             CTTCEECSSSS------------------------------------------------------CCCCBCCCEEETTTC
T ss_pred             ccccccccccc------------------------------------------------------ccccccccCCCcccc
Confidence            99987643211                                                      011223446999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHh-cC-C-----CCC-----CCCCHHHHHH
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET------FYRIL-CR-P-----PDL-----VGEPTPLRNL  313 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~------~~~i~-~~-~-----~~~-----~~~~~~~~~l  313 (426)
                      |||++.+..++.++|||||||++|+|++|+.||.+....+.      ..... .. .     +..     ...+..+.++
T Consensus       209 aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  288 (321)
T 2qkw_B          209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDT  288 (321)
T ss_dssp             CHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHH
T ss_pred             CHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHH
Confidence            99999999999999999999999999999999976543211      00000 00 0     000     1123568899


Q ss_pred             HHHHhccCCCCCCChHHHhcC
Q 014344          314 IRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~h  334 (426)
                      |.+||+.||++|||+.++++|
T Consensus       289 i~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          289 AVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999976

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.2e-46  Score=353.52  Aligned_cols=259  Identities=22%  Similarity=0.307  Sum_probs=207.4

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcC-CCc--eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVE-SSE--SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~-~~~--~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ..+..++|++++.||+|+||+||+|++.. +++  .||||++......          .....+.+.+|+.+++.++|||
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~~~~e~~~l~~l~h~~   82 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS----------QPEAMDDFIREVNAMHSLDHRN   82 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC------------------CHHHHHHHHHHHHHHHCCCTT
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC----------CHHHHHHHHHHHHHHHhCCCCC
Confidence            34667789999999999999999998643 333  6899998554321          1235678889999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |+++++++..+. .++||||+.+++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        83 i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~  160 (291)
T 1u46_A           83 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV  160 (291)
T ss_dssp             BCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEE
T ss_pred             cccEEEEEccCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCE
Confidence            999999997765 899999999999999887653 349999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++.........                                                     ........||
T Consensus       161 kl~Dfg~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~  187 (291)
T 1u46_A          161 KIGDFGLMRALPQNDDH-----------------------------------------------------YVMQEHRKVP  187 (291)
T ss_dssp             EECCCTTCEECCC-CCE-----------------------------------------------------EEC-----CC
T ss_pred             EEccccccccccccccc-----------------------------------------------------hhhhccCCCC
Confidence            99999998876422100                                                     0011233578


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHhccCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---PPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      +.|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....+...   .+.....+..+.++|.+||..||.
T Consensus       188 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  267 (291)
T 1u46_A          188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE  267 (291)
T ss_dssp             GGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             ceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcc
Confidence            89999999999889999999999999999999 99999999988877777543   233346688999999999999999


Q ss_pred             CCCChHHHhcC
Q 014344          324 KRIGVEEIKGH  334 (426)
Q Consensus       324 ~R~s~~eil~h  334 (426)
                      +|||+.+++++
T Consensus       268 ~Rps~~~l~~~  278 (291)
T 1u46_A          268 DRPTFVALRDF  278 (291)
T ss_dssp             GSCCHHHHHHH
T ss_pred             cCcCHHHHHHH
Confidence            99999999873

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.2e-46  Score=361.25  Aligned_cols=261  Identities=22%  Similarity=0.296  Sum_probs=205.7

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ++.++|++++.||+|+||.||+|++..+++.||||++....             ......+.+|+.+++.++||||++++
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~~iv~~~   92 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-------------QQDREEAQREADMHRLFNHPNILRLV   92 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-------------HHHHHHHHHHHHHHHTCCCTTBCCCC
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-------------HHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            56678999999999999999999999999999999984421             22456788899999999999999999


Q ss_pred             eeee----cCCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           93 GVLS----TDKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        93 ~~~~----~~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      +++.    .....|+|||||.+++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~  172 (317)
T 2buj_A           93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQ  172 (317)
T ss_dssp             EEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC
T ss_pred             EEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCC
Confidence            9986    345889999999999999988753  3456999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++.............                                               ..........|
T Consensus       173 ~kl~dfg~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~g  205 (317)
T 2buj_A          173 PVLMDLGSMNQACIHVEGSRQA-----------------------------------------------LTLQDWAAQRC  205 (317)
T ss_dssp             EEECCCSSCEESCEEEESHHHH-----------------------------------------------HHHHHHHHHHS
T ss_pred             EEEEecCcchhccccccccccc-----------------------------------------------ccccccccccC
Confidence            9999999987653110000000                                               00001123458


Q ss_pred             CCCCccchhhcCCC---CChhhHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHh
Q 014344          247 TEEYVAPEIIEGKG---HDFAVDWWSLGVVLHEMLYGATPFRGS-----SRKETFYRILCRPPDLVGEPTPLRNLIRRLL  318 (426)
Q Consensus       247 t~~y~aPE~~~~~~---~~~~~DiwSlG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L  318 (426)
                      |+.|+|||++.+..   ++.++|||||||++|+|++|+.||...     ........ ....+.....+..+.+||.+||
T Consensus       206 t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l  284 (317)
T 2buj_A          206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-QLSIPQSPRHSSALWQLLNSMM  284 (317)
T ss_dssp             CGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C--CCCCTTSCHHHHHHHHHHT
T ss_pred             CcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-cCCCCccccCCHHHHHHHHHHh
Confidence            99999999998654   688999999999999999999999532     11111111 1223334456889999999999


Q ss_pred             ccCCCCCCChHHHhcC
Q 014344          319 EKDPTKRIGVEEIKGH  334 (426)
Q Consensus       319 ~~dP~~R~s~~eil~h  334 (426)
                      +.||.+|||+++++++
T Consensus       285 ~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          285 TVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             hcChhhCCCHHHHHHH
Confidence            9999999999999985

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=9.2e-46  Score=374.38  Aligned_cols=266  Identities=21%  Similarity=0.349  Sum_probs=216.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC-CCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH-PLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~l~~~   94 (426)
                      ++|++++.||+|+||.||+|++..+++.||||++....               ....+..|+.+++.|.| ++|+.+..+
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---------------~~~~~~~E~~il~~L~~~~~i~~i~~~   71 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---------------KHPQLLYESKIYRILQGGTGIPNVRWF   71 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC---------------SSCCHHHHHHHHHHTTTSTTCCCEEEE
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc---------------ccHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence            56999999999999999999999999999999874321               12347789999999987 666677777


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeee---ccCCcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMI---QENGHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl---~~~g~ikL~D  171 (426)
                      +......|+||||| |++|.+++.... ..+++..++.++.||+.||.|||++|||||||||+||||   +.++.+||+|
T Consensus        72 ~~~~~~~~lvme~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~D  149 (483)
T 3sv0_A           72 GVEGDYNVLVMDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIID  149 (483)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECC
T ss_pred             EeeCCEEEEEEECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEe
Confidence            78889999999999 999999987543 459999999999999999999999999999999999999   6889999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+++.+.......                                                 ..........+||+.|+
T Consensus       150 FGla~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~gt~~Y~  180 (483)
T 3sv0_A          150 FGLAKKYRDTSTHQ-------------------------------------------------HIPYRENKNLTGTARYA  180 (483)
T ss_dssp             CTTCEECBCTTTCC-------------------------------------------------BCCCCCCCCCCSCTTTC
T ss_pred             CCcceeccCCcccc-------------------------------------------------ccccccccccCCCcccc
Confidence            99998764321100                                                 00011233567999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcC----C--CCCCCCCHHHHHHHHHHhccCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCR----P--PDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~----~--~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      |||++.+..++.++|||||||++|+|++|+.||.+...   .+.+..+...    .  ....+.+..+.+||.+||..||
T Consensus       181 aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP  260 (483)
T 3sv0_A          181 SVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRF  260 (483)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCT
T ss_pred             CHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCh
Confidence            99999999999999999999999999999999987543   3333333211    1  1113568899999999999999


Q ss_pred             CCCCChHHHh----------cCCCcCCCChhhhhh
Q 014344          323 TKRIGVEEIK----------GHEFFKGVNWELLLK  347 (426)
Q Consensus       323 ~~R~s~~eil----------~hp~f~~~~~~~~~~  347 (426)
                      .+||++++|+          .++|+..++|+.+..
T Consensus       261 ~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~  295 (483)
T 3sv0_A          261 DDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKY  295 (483)
T ss_dssp             TCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC
T ss_pred             hhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhcc
Confidence            9999988774          489999999998743

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=5.2e-46  Score=354.24  Aligned_cols=231  Identities=26%  Similarity=0.422  Sum_probs=191.3

Q ss_pred             CCCCCcEEE-eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHH-HhcCCCCcce
Q 014344           13 LDFSCLRIV-SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-RNVEHPLLPR   90 (426)
Q Consensus        13 l~~~~y~i~-~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il-~~l~hp~iv~   90 (426)
                      .-+++|.++ +.||+|+||.||+|.+..+++.||||++...                  ..+.+|+.++ +.+.||||++
T Consensus        14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------------------~~~~~e~~~~~~~~~h~~i~~   75 (299)
T 3m2w_A           14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------------------PKARREVELHWRASQCPHIVR   75 (299)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------------------HHHHHHHHHHHHHTTSTTBCC
T ss_pred             ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------------------HHHHHHHHHHHHhccCCCchh
Confidence            445679998 7899999999999999999999999998431                  2455688887 5668999999


Q ss_pred             eeeeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---
Q 014344           91 LRGVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---  163 (426)
Q Consensus        91 l~~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---  163 (426)
                      +++++..    ...+|+|||||+|++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   
T Consensus        76 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~  155 (299)
T 3m2w_A           76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP  155 (299)
T ss_dssp             EEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSST
T ss_pred             HHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCC
Confidence            9999977    778999999999999999998776667999999999999999999999999999999999999998   


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      ++.+||+|||++....                                                                
T Consensus       156 ~~~~kl~Dfg~a~~~~----------------------------------------------------------------  171 (299)
T 3m2w_A          156 NAILKLTDFGFAKETT----------------------------------------------------------------  171 (299)
T ss_dssp             TCCEEECCCTTCEECT----------------------------------------------------------------
T ss_pred             CCcEEEeccccccccc----------------------------------------------------------------
Confidence            7899999999886431                                                                


Q ss_pred             cccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----CCCC-----CCCCHHHHHHH
Q 014344          244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR----PPDL-----VGEPTPLRNLI  314 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~----~~~~-----~~~~~~~~~li  314 (426)
                                    +..++.++|||||||++|+|++|+.||.+.............    ....     ...+..+.+||
T Consensus       172 --------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  237 (299)
T 3m2w_A          172 --------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI  237 (299)
T ss_dssp             --------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHH
T ss_pred             --------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHH
Confidence                          133678999999999999999999999876654432221111    1111     24578899999


Q ss_pred             HHHhccCCCCCCChHHHhcCCCcCC
Q 014344          315 RRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       315 ~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      .+||+.||.+|||+.|+++||||+.
T Consensus       238 ~~~l~~dP~~Rps~~e~l~hp~~~~  262 (299)
T 3m2w_A          238 RNLLKTEPTQRMTITEFMNHPWIMQ  262 (299)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHcccChhhCCCHHHHhcChhhcc
Confidence            9999999999999999999999964

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=5.2e-46  Score=381.98  Aligned_cols=254  Identities=22%  Similarity=0.300  Sum_probs=215.9

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .+.+..++|++.+.||+|+||.||+|.+.. +..||||++....              ...+.+.+|+.+|+.++||||+
T Consensus       261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~hpniv  325 (535)
T 2h8h_A          261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT--------------MSPEAFLQEAQVMKKLRHEKLV  325 (535)
T ss_dssp             CSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS--------------SCHHHHHHHHHHHHHCCCTTBC
T ss_pred             ceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC--------------CCHHHHHHHHHHHHhCCCCCEe
Confidence            466788899999999999999999999865 4679999985422              1235688899999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.. +.+|+|||||.+|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus       326 ~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl  404 (535)
T 2h8h_A          326 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV  404 (535)
T ss_dssp             CEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             eEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEE
Confidence            99999866 77899999999999999987655556999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.+....                                                       ........+|+.
T Consensus       405 ~DFG~a~~~~~~~-------------------------------------------------------~~~~~~~~~~~~  429 (535)
T 2h8h_A          405 ADFGLARLIEDNE-------------------------------------------------------YTARQGAKFPIK  429 (535)
T ss_dssp             CCTTSTTTCCCHH-------------------------------------------------------HHTTCSTTSCGG
T ss_pred             cccccceecCCCc-------------------------------------------------------eecccCCcCccc
Confidence            9999997653110                                                       000112246788


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|||++ |+.||.+....+....+...  .+....++..+.+||.+||..||++||
T Consensus       430 y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP  509 (535)
T 2h8h_A          430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERP  509 (535)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCc
Confidence            999999999999999999999999999999 99999999888877776543  233446788999999999999999999


Q ss_pred             ChHHHhcC
Q 014344          327 GVEEIKGH  334 (426)
Q Consensus       327 s~~eil~h  334 (426)
                      |+++|++.
T Consensus       510 t~~~l~~~  517 (535)
T 2h8h_A          510 TFEYLQAF  517 (535)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999863

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.7e-46  Score=357.39  Aligned_cols=265  Identities=19%  Similarity=0.323  Sum_probs=208.9

Q ss_pred             CCcCCCCCCCCCCCCCcEEEeeecccCceEEEEEE----EcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHH
Q 014344            2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVK----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ   77 (426)
Q Consensus         2 ~~~~~~~~~~~l~~~~y~i~~~LG~G~~g~V~~a~----~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~   77 (426)
                      .+.+.+.....+..++|++++.||+|+||.||+|+    +..+++.||||++...             .....+.+.+|+
T Consensus        27 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-------------~~~~~~~~~~E~   93 (326)
T 2w1i_A           27 GSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-------------TEEHLRDFEREI   93 (326)
T ss_dssp             ----------CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC-------------CSHHHHHHHHHH
T ss_pred             HHHhcccCccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC-------------CHHHHHHHHHHH
Confidence            34555666777888899999999999999999998    4678999999998432             223456788999


Q ss_pred             HHHHhcCCCCcceeeeeeecCC--eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Q 014344           78 RVLRNVEHPLLPRLRGVLSTDK--FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLK  155 (426)
Q Consensus        78 ~il~~l~hp~iv~l~~~~~~~~--~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlK  155 (426)
                      .+|+.++||||+++++++...+  .+++||||++|++|.+++.... ..+++..+..++.||+.||.|||++||+|||||
T Consensus        94 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dik  172 (326)
T 2w1i_A           94 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA  172 (326)
T ss_dssp             HHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCC
T ss_pred             HHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCC
Confidence            9999999999999999986544  7899999999999999987653 459999999999999999999999999999999


Q ss_pred             CCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          156 PENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDS  235 (426)
Q Consensus       156 p~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (426)
                      |+|||++.++.+||+|||++.........                                                   
T Consensus       173 p~NIli~~~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------------  201 (326)
T 2w1i_A          173 TRNILVENENRVKIGDFGLTKVLPQDKEY---------------------------------------------------  201 (326)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCSSCSE---------------------------------------------------
T ss_pred             cceEEEcCCCcEEEecCcchhhccccccc---------------------------------------------------
Confidence            99999999999999999999876422100                                                   


Q ss_pred             CCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH------------H---HHHHHh---
Q 014344          236 DSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK------------E---TFYRIL---  297 (426)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~------------~---~~~~i~---  297 (426)
                        ........+|+.|+|||++.+..++.++|||||||++|+|++|..||......            .   .....+   
T Consensus       202 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (326)
T 2w1i_A          202 --YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN  279 (326)
T ss_dssp             --EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred             --cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence              00112234788899999999988999999999999999999999998643211            0   011111   


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          298 CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       298 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ...+.....+..+.+||.+||..||++|||+.++++
T Consensus       280 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          280 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            123344567899999999999999999999999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=3e-47  Score=366.94  Aligned_cols=255  Identities=21%  Similarity=0.221  Sum_probs=204.1

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +..++|++.+.||+|+||+||+|++ .+++.||||++......            .....+.+|+.+++.++||||++++
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~   93 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQ------------GGELQFQTEVEMISMAVHRNLLRLR   93 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----------------CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred             HHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCc------------hHHHHHHHHHHHHHhccCCCccceE
Confidence            4457899999999999999999985 46899999998553211            1123578899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCCCCeeeccCCcE
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQS--EQMFSDDTIRFYAAELVLALEYLHNM---GIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--~~~l~~~~~~~~~~qil~aL~~LH~~---giiHrDlKp~NiLl~~~g~i  167 (426)
                      +++.+.+..++|||||.||+|.+++....  ...+++..+..++.||+.||+|||++   ||+||||||+|||++.++.+
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~  173 (326)
T 3uim_A           94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA  173 (326)
T ss_dssp             EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred             EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence            99999999999999999999999987543  23489999999999999999999999   99999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++.......                                                       .......+||
T Consensus       174 kl~Dfg~~~~~~~~~-------------------------------------------------------~~~~~~~~gt  198 (326)
T 3uim_A          174 VVGDFGLAKLMDYKD-------------------------------------------------------THVTTAVRGT  198 (326)
T ss_dssp             EECCCSSCEECCSSS-------------------------------------------------------SCEECCCCSC
T ss_pred             EeccCccccccCccc-------------------------------------------------------ccccccccCC
Confidence            999999997653211                                                       1122344699


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhcCC--CCC----------CCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS--------RKETFYRILCRP--PDL----------VGEP  307 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~--~~~----------~~~~  307 (426)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||....        ............  ...          ...+
T Consensus       199 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T 3uim_A          199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV  278 (326)
T ss_dssp             GGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHH
T ss_pred             cCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHH
Confidence            99999999999889999999999999999999999995211        011111111100  000          0112


Q ss_pred             HHHHHHHHHHhccCCCCCCChHHHhcCC
Q 014344          308 TPLRNLIRRLLEKDPTKRIGVEEIKGHE  335 (426)
Q Consensus       308 ~~~~~li~~~L~~dP~~R~s~~eil~hp  335 (426)
                      ..+.+||.+||+.||.+|||+.+|++|-
T Consensus       279 ~~l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          279 EQLIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence            5688999999999999999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-46  Score=365.14  Aligned_cols=253  Identities=19%  Similarity=0.270  Sum_probs=199.5

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCC---ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESS---ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~---~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .|++.+.||+|+||+||+|.+..++   ..||+|++...            ......+.+.+|+.+|+.++||||+++++
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~------------~~~~~~~~~~~E~~il~~l~hpnIv~~~~  157 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI------------TDIGEVSQFLTEGIIMKDFSHPNVLSLLG  157 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC------------SCSHHHHHHHHHHTTSTTCCCTTBCCCCE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC------------CCHHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            5889999999999999999976443   46899987431            12345678889999999999999999999


Q ss_pred             ee-ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           94 VL-STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        94 ~~-~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++ ..++..|+|||||++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       158 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DF  236 (373)
T 3c1x_A          158 ICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADF  236 (373)
T ss_dssp             EECCCSSCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             EEEcCCCCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeec
Confidence            86 45668899999999999999986543 45889999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+++.+......                                                    .........||+.|+|
T Consensus       237 G~a~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~y~a  264 (373)
T 3c1x_A          237 GLARDMYDKEFD----------------------------------------------------SVHNKTGAKLPVKWMA  264 (373)
T ss_dssp             -------------------------------------------------------------------------CCGGGSC
T ss_pred             cccccccccccc----------------------------------------------------cccccCCCCCcccccC
Confidence            999865321100                                                    0011223357889999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||++.+..++.++|||||||++|||++ |.+||.+.+..+....+...  .......+..+.++|.+||..||.+|||+.
T Consensus       265 PE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~  344 (373)
T 3c1x_A          265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS  344 (373)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            999999999999999999999999999 78899877665555444432  233345688999999999999999999999


Q ss_pred             HHhcC
Q 014344          330 EIKGH  334 (426)
Q Consensus       330 eil~h  334 (426)
                      +++++
T Consensus       345 ell~~  349 (373)
T 3c1x_A          345 ELVSR  349 (373)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99874

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=8.7e-46  Score=357.52  Aligned_cols=263  Identities=24%  Similarity=0.330  Sum_probs=189.8

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      +.-.+|++.+.||+|+||.||+|++..+++.||||++....             ....+.+.+|+.+++++. ||||+++
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~~h~~iv~~   91 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-------------EEKNRAIIQEVCFMKKLSGHPNIVQF   91 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-------------HHHHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-------------hHHHHHHHHHHHHHHHhccCCChhhc
Confidence            44558999999999999999999999999999999884432             223467888999999996 9999999


Q ss_pred             eeee--------ecCCeEEEEEeccCCCChHHHHHH-hccCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCee
Q 014344           92 RGVL--------STDKFVGYAIDYCPGRDLHSLRKQ-QSEQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIM  160 (426)
Q Consensus        92 ~~~~--------~~~~~~~lV~Ey~~gg~L~~l~~~-~~~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiL  160 (426)
                      ++++        .....+++|||||. |+|.+++.. .....+++..++.++.||+.||.|||++|  |+||||||+|||
T Consensus        92 ~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl  170 (337)
T 3ll6_A           92 CSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL  170 (337)
T ss_dssp             EEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCE
T ss_pred             cccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEE
Confidence            9998        34456899999996 788887764 23456999999999999999999999999  999999999999


Q ss_pred             eccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          161 IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEK  240 (426)
Q Consensus       161 l~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
                      ++.++.+||+|||++............                                            .........
T Consensus       171 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~  206 (337)
T 3ll6_A          171 LSNQGTIKLCDFGSATTISHYPDYSWS--------------------------------------------AQRRALVEE  206 (337)
T ss_dssp             ECTTSCEEBCCCTTCBCCSSCC----------------------------------------------------------
T ss_pred             ECCCCCEEEecCccceeccccCccccc--------------------------------------------ccccccchh
Confidence            999999999999999876432210000                                            000000112


Q ss_pred             ccccccCCCCccchhh---cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 014344          241 SNSFVGTEEYVAPEII---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRL  317 (426)
Q Consensus       241 ~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~  317 (426)
                      ....+||+.|+|||++   .+..++.++|||||||++|+|++|+.||.............. .+.....+..+.+||.+|
T Consensus       207 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~  285 (337)
T 3ll6_A          207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYS-IPPHDTQYTVFHSLIRAM  285 (337)
T ss_dssp             -----------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------CC-CCTTCCSSGGGHHHHHHH
T ss_pred             hccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCccc-CCcccccchHHHHHHHHH
Confidence            2345699999999998   566789999999999999999999999987665544333322 223344567899999999


Q ss_pred             hccCCCCCCChHHHhcC
Q 014344          318 LEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       318 L~~dP~~R~s~~eil~h  334 (426)
                      |+.||.+|||+.|+++|
T Consensus       286 l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          286 LQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             SCSSGGGSCCHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHH
Confidence            99999999999999987

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.7e-46  Score=366.25  Aligned_cols=250  Identities=13%  Similarity=0.192  Sum_probs=199.3

Q ss_pred             CCCCCCcEEEeeecccCceEEEEE-----EEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLV-----KDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--   84 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a-----~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--   84 (426)
                      .+..++|++.+.||+|+||+||+|     .+..+++.||||++...                ....+..|+.+++.+.  
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~e~~~~~~l~~~  124 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----------------NPWEFYIGTQLMERLKPS  124 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----------------CHHHHHHHHHHHHHSCGG
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----------------ChhHHHHHHHHHHHhhhh
Confidence            355678999999999999999999     46788999999998432                2345667888888887  


Q ss_pred             -CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCee
Q 014344           85 -HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ---SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIM  160 (426)
Q Consensus        85 -hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~---~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiL  160 (426)
                       |+||+.+++++...+..|+|||||+||+|.+++...   ....+++..++.++.||+.||+|||++|||||||||+|||
T Consensus       125 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIl  204 (365)
T 3e7e_A          125 MQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFI  204 (365)
T ss_dssp             GGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEE
T ss_pred             hhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEE
Confidence             899999999999999999999999999999998753   2456999999999999999999999999999999999999


Q ss_pred             ecc-----------CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCC
Q 014344          161 IQE-----------NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDP  229 (426)
Q Consensus       161 l~~-----------~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (426)
                      ++.           ++.+||+|||+|+.+....                                               
T Consensus       205 l~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----------------------------------------------  237 (365)
T 3e7e_A          205 LGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFP-----------------------------------------------  237 (365)
T ss_dssp             ECGGGTCC------CTTEEECCCTTCEEGGGSC-----------------------------------------------
T ss_pred             ecccccCccccccccCCEEEeeCchhhhhhccC-----------------------------------------------
Confidence            998           8999999999997542110                                               


Q ss_pred             CCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHH
Q 014344          230 PSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP  309 (426)
Q Consensus       230 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  309 (426)
                             ........+||+.|+|||++.+..|+.++|||||||++|||++|+.||........  . ..........+..
T Consensus       238 -------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~-~~~~~~~~~~~~~  307 (365)
T 3e7e_A          238 -------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--K-PEGLFRRLPHLDM  307 (365)
T ss_dssp             -------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--E-ECSCCTTCSSHHH
T ss_pred             -------CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--e-echhccccCcHHH
Confidence                   01123445799999999999999999999999999999999999999965432110  0 0111111123567


Q ss_pred             HHHHHHHHhccCCCCCCChHHHhcC
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +.+++..||..+|.+|++..+.+.+
T Consensus       308 ~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          308 WNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             HHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHcCCCCCCcchHHHHHHH
Confidence            8899999999999999765544443

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.2e-45  Score=382.69  Aligned_cols=252  Identities=20%  Similarity=0.260  Sum_probs=206.8

Q ss_pred             CCCcEEE-eeecccCceEEEEEEE--cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           15 FSCLRIV-SALGRGAKGVVFLVKD--VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        15 ~~~y~i~-~~LG~G~~g~V~~a~~--~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ...+.+. +.||+|+||+||+|.+  ..+++.||||++.....           .....+.+.+|+.+|+.++||||+++
T Consensus       367 ~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-----------~~~~~~~~~~E~~il~~l~hpnIv~l  435 (635)
T 4fl3_A          367 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-----------DPALKDELLAEANVMQQLDNPYIVRM  435 (635)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-----------CGGGHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             chhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-----------CHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3345544 4899999999999955  46678999999855421           12245678999999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++.. +.+++|||||.||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|
T Consensus       436 ~~~~~~-~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~D  512 (635)
T 4fl3_A          436 IGICEA-ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISD  512 (635)
T ss_dssp             EEEEES-SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC
T ss_pred             EEEEec-CCEEEEEEccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEE
Confidence            999965 4588999999999999998754  4599999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+++.+......                                                     ........||+.|+
T Consensus       513 FGla~~~~~~~~~-----------------------------------------------------~~~~~~~~~t~~y~  539 (635)
T 4fl3_A          513 FGLSKALRADENY-----------------------------------------------------YKAQTHGKWPVKWY  539 (635)
T ss_dssp             TTHHHHTTC------------------------------------------------------------------CGGGS
T ss_pred             cCCccccccCccc-----------------------------------------------------cccccCCCCceeee
Confidence            9999876432100                                                     01122234788999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCCh
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGV  328 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~  328 (426)
                      |||++.+..++.++|||||||++|||++ |+.||.+.+..+....+...  .......+..+.+||.+||..||++|||+
T Consensus       540 APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~  619 (635)
T 4fl3_A          540 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF  619 (635)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             ChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCH
Confidence            9999999999999999999999999998 99999999988877776543  23344678999999999999999999999


Q ss_pred             HHHhc
Q 014344          329 EEIKG  333 (426)
Q Consensus       329 ~eil~  333 (426)
                      .+|++
T Consensus       620 ~~l~~  624 (635)
T 4fl3_A          620 AAVEL  624 (635)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99975

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.2e-45  Score=357.16  Aligned_cols=256  Identities=23%  Similarity=0.323  Sum_probs=190.8

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHH--HHhcCCC
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV--LRNVEHP   86 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i--l~~l~hp   86 (426)
                      ..+.+++++|++++.||+|+||+||+|++  +++.||||++.....                ..+..|..+  +..++||
T Consensus         6 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~----------------~~~~~e~~~~~~~~~~h~   67 (336)
T 3g2f_A            6 SEPSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR----------------QNFINEKNIYRVPLMEHD   67 (336)
T ss_dssp             ---CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH----------------HHHHHHHHHHTSTTCCCT
T ss_pred             cCCCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch----------------hhHHHHHHHHHHHhccCc
Confidence            45678999999999999999999999975  689999999854321                223334444  4558999


Q ss_pred             Ccceeeeeee-----cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---------CCccc
Q 014344           87 LLPRLRGVLS-----TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM---------GIVYR  152 (426)
Q Consensus        87 ~iv~l~~~~~-----~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~---------giiHr  152 (426)
                      ||+++++.+.     ....+|+|||||+||+|.+++....   +++..+..++.||+.||.|||+.         ||+||
T Consensus        68 ~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~  144 (336)
T 3g2f_A           68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHR  144 (336)
T ss_dssp             TBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECS
T ss_pred             chhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeec
Confidence            9999997543     3346899999999999999986543   68899999999999999999999         99999


Q ss_pred             CCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 014344          153 DLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSR  232 (426)
Q Consensus       153 DlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (426)
                      ||||+|||++.++.+||+|||++..+........                                              
T Consensus       145 Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~----------------------------------------------  178 (336)
T 3g2f_A          145 DLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP----------------------------------------------  178 (336)
T ss_dssp             SCSGGGEEECTTSCEEECCCTTCEECSSSSCC------------------------------------------------
T ss_pred             ccccceEEEcCCCcEEEeeccceeecccccccCc----------------------------------------------
Confidence            9999999999999999999999987643211000                                              


Q ss_pred             CCCCCCCCccccccCCCCccchhhcC-------CCCChhhHHHHHHHHHHHHHhCCCCCCCCCH----------------
Q 014344          233 SDSDSSEKSNSFVGTEEYVAPEIIEG-------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR----------------  289 (426)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~----------------  289 (426)
                        ..........+||+.|+|||++.+       ..++.++|||||||++|||++|..||.....                
T Consensus       179 --~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~  256 (336)
T 3g2f_A          179 --GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHP  256 (336)
T ss_dssp             ---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSC
T ss_pred             --cccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCc
Confidence              001122335579999999999987       3566899999999999999999766533211                


Q ss_pred             -HHHHHHHhcC---CCCCCC-------CCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          290 -KETFYRILCR---PPDLVG-------EPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       290 -~~~~~~i~~~---~~~~~~-------~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                       ..........   .+..+.       .+..+.+||.+||..||++|||+.|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          257 TFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             CHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence             1111122211   111111       1236999999999999999999999954

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=6e-45  Score=379.56  Aligned_cols=254  Identities=20%  Similarity=0.236  Sum_probs=208.6

Q ss_pred             CCCCCcEEEe-eecccCceEEEEEEEcC--CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           13 LDFSCLRIVS-ALGRGAKGVVFLVKDVE--SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        13 l~~~~y~i~~-~LG~G~~g~V~~a~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      +..+++.+.+ .||+|+||.||+|.+..  ++..||||++....            .....+.+.+|+.+|+.++||||+
T Consensus       332 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~------------~~~~~~~~~~E~~il~~l~hpniv  399 (613)
T 2ozo_A          332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT------------EKADTEEMMREAQIMHQLDNPYIV  399 (613)
T ss_dssp             CCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC------------SSTTHHHHHHHHHHHTTCCCTTBC
T ss_pred             ccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC------------ChHHHHHHHHHHHHHHhCCCCCEe
Confidence            4556677777 89999999999998763  45679999985421            123456788999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.. +.+|+|||||.||+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus       400 ~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL  477 (613)
T 2ozo_A          400 RLIGVCQA-EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKI  477 (613)
T ss_dssp             CEEEEEES-SSEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             eEEEEecc-CCeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEE
Confidence            99999976 5689999999999999988644 345999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.+......                                                     ........+|+.
T Consensus       478 ~DFGla~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~  504 (613)
T 2ozo_A          478 SDFGLSKALGADDSY-----------------------------------------------------YTARSAGKWPLK  504 (613)
T ss_dssp             CCCSTTTTCC-------------------------------------------------------------------CCT
T ss_pred             eeccCcccccCCCce-----------------------------------------------------eeeccCCCCccc
Confidence            999999866321100                                                     001112236789


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+...  .+....++..+.+||.+||..||.+||
T Consensus       505 y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RP  584 (613)
T 2ozo_A          505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRP  584 (613)
T ss_dssp             TSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSC
T ss_pred             eeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCc
Confidence            999999999999999999999999999998 99999998888877776543  233446789999999999999999999


Q ss_pred             ChHHHhc
Q 014344          327 GVEEIKG  333 (426)
Q Consensus       327 s~~eil~  333 (426)
                      ++.+|++
T Consensus       585 s~~~l~~  591 (613)
T 2ozo_A          585 DFLTVEQ  591 (613)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.4e-45  Score=354.40  Aligned_cols=253  Identities=20%  Similarity=0.282  Sum_probs=204.4

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEE----cCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKD----VESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      +.-..|++++.||+|+||+||++..    ..+++.||||++....            .......+.+|+.+|+.++||||
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~i   95 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA------------GPQHRSGWKQEIDILRTLYHEHI   95 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC------------CHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc------------ChHHHHHHHHHHHHHHhCCCcch
Confidence            4444469999999999999988753    4578999999985431            12345678899999999999999


Q ss_pred             ceeeeeeec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           89 PRLRGVLST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        89 v~l~~~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      +++++++.+  ...+|+|||||++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus        96 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~  172 (318)
T 3lxp_A           96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL  172 (318)
T ss_dssp             CCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred             hhEEEEEecCCCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCC
Confidence            999999987  46899999999999999987643   3999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++........                                                     .........|
T Consensus       173 ~kl~Dfg~a~~~~~~~~-----------------------------------------------------~~~~~~~~~~  199 (318)
T 3lxp_A          173 VKIGDFGLAKAVPEGHE-----------------------------------------------------YYRVREDGDS  199 (318)
T ss_dssp             EEECCGGGCEECCTTCS-----------------------------------------------------EEEC---CCC
T ss_pred             EEECCcccccccccccc-----------------------------------------------------ccccccCCCC
Confidence            99999999987643210                                                     0011223458


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHH--------------HHHHHh---cCCCCCCCCCHH
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE--------------TFYRIL---CRPPDLVGEPTP  309 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--------------~~~~i~---~~~~~~~~~~~~  309 (426)
                      |+.|+|||++.+..++.++|||||||++|+|++|+.||.......              .....+   ...+.....+..
T Consensus       200 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (318)
T 3lxp_A          200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE  279 (318)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             CceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHH
Confidence            889999999999999999999999999999999999997643221              111111   223344566889


Q ss_pred             HHHHHHHHhccCCCCCCChHHHhc
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      +.+||.+||+.||.+|||++++++
T Consensus       280 l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          280 VYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.1e-46  Score=386.89  Aligned_cols=259  Identities=25%  Similarity=0.390  Sum_probs=206.3

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ...+++|++++.||+|+||+||+|.+..+|+.||||++....            .......+.+|+.+|+.++||||+++
T Consensus        10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~------------~~~~~~~~~~Ei~iL~~L~HpnIV~l   77 (676)
T 3qa8_A           10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL------------SPKNRERWCLEIQIMKKLNHPNVVSA   77 (676)
T ss_dssp             -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC------------CHHHHHHHHHHHHHHHHCCBTTBCCE
T ss_pred             CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC------------CHHHHHHHHHHHHHHHhCCCCCCCce
Confidence            445688999999999999999999999999999999984421            22345678889999999999999999


Q ss_pred             eeeeec------CCeEEEEEeccCCCChHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC
Q 014344           92 RGVLST------DKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN  164 (426)
Q Consensus        92 ~~~~~~------~~~~~lV~Ey~~gg~L~~l~~~~~-~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~  164 (426)
                      ++++..      .+..|+|||||+||+|.+++.... ...+++..++.++.||+.||+|||+.||+||||||+|||++.+
T Consensus        78 ~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~  157 (676)
T 3qa8_A           78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG  157 (676)
T ss_dssp             EECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECC
T ss_pred             eeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecC
Confidence            999765      778899999999999999987543 2359999999999999999999999999999999999999977


Q ss_pred             Cc---EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          165 GH---IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       165 g~---ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                      +.   +||+|||++......                                                         ...
T Consensus       158 g~~~~vKL~DFG~a~~~~~~---------------------------------------------------------~~~  180 (676)
T 3qa8_A          158 PQRLIHKIIDLGYAKELDQG---------------------------------------------------------ELC  180 (676)
T ss_dssp             SSSCEEEECSCCCCCBTTSC---------------------------------------------------------CCC
T ss_pred             CCceeEEEcccccccccccc---------------------------------------------------------ccc
Confidence            65   999999999765321                                                         112


Q ss_pred             cccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--------------cCC-------
Q 014344          242 NSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--------------CRP-------  300 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~--------------~~~-------  300 (426)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|..||.+......+....              ...       
T Consensus       181 ~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~l  260 (676)
T 3qa8_A          181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVL  260 (676)
T ss_dssp             CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSS
T ss_pred             ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccccccccc
Confidence            34569999999999999999999999999999999999999998764433221110              000       


Q ss_pred             CCC----CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          301 PDL----VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       301 ~~~----~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      +..    ...+..+.+||.+||.+||++|||+.+++.||||+.
T Consensus       261 p~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          261 PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             CCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            000    012467899999999999999999999999999986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2.7e-45  Score=351.93  Aligned_cols=258  Identities=21%  Similarity=0.287  Sum_probs=208.4

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL   88 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i   88 (426)
                      ..+.+..++|++++.||+|+||.||+|.+..   .+|+|++.....           .....+.+.+|+.+++.++||||
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~i   91 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-----------NEDQLKAFKREVMAYRQTRHENV   91 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-----------CCCCCCCCCTTGGGGTTCCCTTB
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-----------CHHHHHHHHHHHHHHhcCCCCCE
Confidence            3567888999999999999999999999753   599999854321           11223456668999999999999


Q ss_pred             ceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           89 PRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        89 v~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      +++++++.....+++||||++|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++ ++.+|
T Consensus        92 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~  169 (319)
T 2y4i_B           92 VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVV  169 (319)
T ss_dssp             CCCCEEEECSSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCE
T ss_pred             eEEEEEEecCCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEE
Confidence            999999999999999999999999999876533 4599999999999999999999999999999999999998 78999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++........                                                   ...........||+
T Consensus       170 l~Dfg~~~~~~~~~~---------------------------------------------------~~~~~~~~~~~g~~  198 (319)
T 2y4i_B          170 ITDFGLFSISGVLQA---------------------------------------------------GRREDKLRIQNGWL  198 (319)
T ss_dssp             ECCCSCCC-------------------------------------------------------------CCSCBCCSGGG
T ss_pred             EeecCCccccccccc---------------------------------------------------cccccccccCCCcc
Confidence            999999875431110                                                   00111233446999


Q ss_pred             CCccchhhcC---------CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHH
Q 014344          249 EYVAPEIIEG---------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRR  316 (426)
Q Consensus       249 ~y~aPE~~~~---------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~  316 (426)
                      .|+|||++.+         ..++.++|||||||++|+|++|+.||...........+.....   .....+..+.+||.+
T Consensus       199 ~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  278 (319)
T 2y4i_B          199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLF  278 (319)
T ss_dssp             GTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHH
T ss_pred             cccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHH
Confidence            9999999975         4578999999999999999999999999888877766653322   122467889999999


Q ss_pred             HhccCCCCCCChHHHhc
Q 014344          317 LLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~  333 (426)
                      ||..||.+|||+.++++
T Consensus       279 ~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          279 CWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHCSSTTTSCCHHHHHH
T ss_pred             HhcCChhhCcCHHHHHH
Confidence            99999999999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-44  Score=348.40  Aligned_cols=246  Identities=23%  Similarity=0.333  Sum_probs=192.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc--CCCCcceeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV--EHPLLPRLRG   93 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l--~hp~iv~l~~   93 (426)
                      ++|++++.||+|+||.||+|++.  ++.||||++....                ......|.+++..+  +||||+++++
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----------------~~~~~~e~~~~~~~~~~h~~i~~~~~   98 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE----------------EASWFRETEIYQTVLMRHENILGFIA   98 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG----------------HHHHHHHHHHHTSTTCCCTTBCCEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc----------------cchhhhHHHHHHHHhhcCCCeeeEEE
Confidence            57999999999999999999874  8999999985432                12334455565554  8999999999


Q ss_pred             eeecC----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--------CCcccCCCCCCeee
Q 014344           94 VLSTD----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM--------GIVYRDLKPENIMI  161 (426)
Q Consensus        94 ~~~~~----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~--------giiHrDlKp~NiLl  161 (426)
                      ++...    ..+|+|||||+||+|.++++..   .+++..+..++.|++.||.|||++        ||+||||||+|||+
T Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill  175 (337)
T 3mdy_A           99 ADIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV  175 (337)
T ss_dssp             EEEESCGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred             EEccCCCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE
Confidence            99877    7899999999999999998653   499999999999999999999998        99999999999999


Q ss_pred             ccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          162 QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       162 ~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                      +.++.+||+|||++..+......                                                    .....
T Consensus       176 ~~~~~~kl~Dfg~a~~~~~~~~~----------------------------------------------------~~~~~  203 (337)
T 3mdy_A          176 KKNGTCCIADLGLAVKFISDTNE----------------------------------------------------VDIPP  203 (337)
T ss_dssp             CTTSCEEECCCTTCEECC-------------------------------------------------------------C
T ss_pred             CCCCCEEEEeCCCceeecccccc----------------------------------------------------ccCCC
Confidence            99999999999999766422110                                                    00112


Q ss_pred             cccccCCCCccchhhcCCCCChh------hHHHHHHHHHHHHHhC----------CCCCCCCC----HHHHHHHHhcC--
Q 014344          242 NSFVGTEEYVAPEIIEGKGHDFA------VDWWSLGVVLHEMLYG----------ATPFRGSS----RKETFYRILCR--  299 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~~~~~~------~DiwSlG~il~ell~g----------~~pf~~~~----~~~~~~~i~~~--  299 (426)
                      ...+||+.|+|||++.+..++..      +|||||||++|||++|          ..||....    ...........  
T Consensus       204 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  283 (337)
T 3mdy_A          204 NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK  283 (337)
T ss_dssp             CSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred             CCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhc
Confidence            34579999999999988766554      9999999999999999          77775432    12222222211  


Q ss_pred             -CCCCC------CCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          300 -PPDLV------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       300 -~~~~~------~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                       .+...      ..+..+.+||.+||+.||.+|||+.++++|
T Consensus       284 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence             11111      224568999999999999999999999976

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.6e-44  Score=377.14  Aligned_cols=255  Identities=24%  Similarity=0.352  Sum_probs=212.4

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCC---CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVES---SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ..+..++|++++.||+|+||+||+|.+..+   +..||||++....            .......+.+|+.+|+.++|||
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~Hpn  452 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT------------SDSVREKFLQEALTMRQFDHPH  452 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT------------CHHHHHHHHHHHHHHHHCCCTT
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC------------CHHHHHHHHHHHHHHHhCCCCC
Confidence            345667899999999999999999998654   4579999874321            2234567889999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |+++++++. ++.+|+|||||+||+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+
T Consensus       453 Iv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~v  530 (656)
T 2j0j_A          453 IVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV  530 (656)
T ss_dssp             BCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE
T ss_pred             CCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCE
Confidence            999999984 567899999999999999987543 358999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||++........                                                       .......||
T Consensus       531 kL~DFG~a~~~~~~~~-------------------------------------------------------~~~~~~~~t  555 (656)
T 2j0j_A          531 KLGDFGLSRYMEDSTY-------------------------------------------------------YKASKGKLP  555 (656)
T ss_dssp             EECCCCCCCSCCC-----------------------------------------------------------------CC
T ss_pred             EEEecCCCeecCCCcc-------------------------------------------------------eeccCCCCC
Confidence            9999999986532110                                                       011223478


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+...  .+.....+..+.+||.+||..||.+
T Consensus       556 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  635 (656)
T 2j0j_A          556 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR  635 (656)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhH
Confidence            89999999999999999999999999999997 99999999888877776543  3344567899999999999999999


Q ss_pred             CCChHHHhcC
Q 014344          325 RIGVEEIKGH  334 (426)
Q Consensus       325 R~s~~eil~h  334 (426)
                      |||+.+|++.
T Consensus       636 RPs~~el~~~  645 (656)
T 2j0j_A          636 RPRFTELKAQ  645 (656)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999863

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=7.7e-47  Score=365.92  Aligned_cols=249  Identities=16%  Similarity=0.200  Sum_probs=192.2

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--------
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--------   84 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--------   84 (426)
                      +..++|++++.||+|+||+||+|++  +++.||||++.+......     ........+.+.+|+.+|+.++        
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~-----~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~   89 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLV-----NGSHQKTFEEILPEIIISKELSLLSGEVCN   89 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCB-----TTBCCBCHHHHHHHHHHHHHHHHGGGCSSS
T ss_pred             cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCcccc-----ccccchhHHHHHHHHHHHHHHHHhhccccc
Confidence            4567899999999999999999998  789999999965432100     0012233467888999999886        


Q ss_pred             -CCCcceeeee-----------------eec-------------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHH
Q 014344           85 -HPLLPRLRGV-----------------LST-------------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY  133 (426)
Q Consensus        85 -hp~iv~l~~~-----------------~~~-------------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~  133 (426)
                       ||||+++.++                 |.+             ...+|+|||||++|++.+.+..   +.+++..++.+
T Consensus        90 ~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i  166 (336)
T 2vuw_A           90 RTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSI  166 (336)
T ss_dssp             BCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHH
T ss_pred             cCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHH
Confidence             6666655554                 433             7899999999999976555432   45899999999


Q ss_pred             HHHHHHHHHHHH-HCCCcccCCCCCCeeeccCC--------------------cEEEecccccccCCCCCCCCCcchhhc
Q 014344          134 AAELVLALEYLH-NMGIVYRDLKPENIMIQENG--------------------HIMLVDFDLSTKLSPKTPQASPKTVLA  192 (426)
Q Consensus       134 ~~qil~aL~~LH-~~giiHrDlKp~NiLl~~~g--------------------~ikL~DFgls~~~~~~~~~~~~~~~~~  192 (426)
                      +.||+.||+||| ++||+||||||+|||++.+|                    .+||+|||+|+....            
T Consensus       167 ~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------  234 (336)
T 2vuw_A          167 LHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------  234 (336)
T ss_dssp             HHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------------
T ss_pred             HHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------------
Confidence            999999999999 99999999999999999987                    899999999986521            


Q ss_pred             cccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHH
Q 014344          193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGV  272 (426)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  272 (426)
                                                                       ...+||+.|+|||++.+.. +.++||||+|+
T Consensus       235 -------------------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~  264 (336)
T 2vuw_A          235 -------------------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMK  264 (336)
T ss_dssp             -------------------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHH
T ss_pred             -------------------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhC
Confidence                                                             1337999999999999877 99999999877


Q ss_pred             H-HHHHHhCCCCCCCCCH-HHHHHHHh---cCCCCC-----CCCCHHHHHHHHHHhccCCCCCCChHHHh-cCCCcC
Q 014344          273 V-LHEMLYGATPFRGSSR-KETFYRIL---CRPPDL-----VGEPTPLRNLIRRLLEKDPTKRIGVEEIK-GHEFFK  338 (426)
Q Consensus       273 i-l~ell~g~~pf~~~~~-~~~~~~i~---~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s~~eil-~hp~f~  338 (426)
                      + .++++.|..||.+... ......+.   ......     ...++.+++||++||++|     |++|+| +||||+
T Consensus       265 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          265 KENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             CCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            7 7888899999954321 11122222   111111     123567899999999987     999999 999995

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=5.1e-45  Score=348.25  Aligned_cols=251  Identities=20%  Similarity=0.222  Sum_probs=200.5

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |...+.||+|+||+||+|.+  +++.||+|++.....         .......+.+.+|+.+++.++||||+++++++.+
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~  101 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVD---------ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD  101 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTT---------SCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccC---------cchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec
Confidence            45568999999999999985  688999999854211         1122345678899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           98 DKFVGYAIDYCPGRDLHSLRKQQS-EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        98 ~~~~~lV~Ey~~gg~L~~l~~~~~-~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      .+..|+||||++|++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  181 (307)
T 2nru_A          102 GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR  181 (307)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccc
Confidence            999999999999999999887432 3469999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .......                                                      .......+||+.|+|||++
T Consensus       182 ~~~~~~~------------------------------------------------------~~~~~~~~g~~~y~aPE~~  207 (307)
T 2nru_A          182 ASEKFAQ------------------------------------------------------TVMTSRIVGTTAYMAPEAL  207 (307)
T ss_dssp             ECCSCSS------------------------------------------------------CEECSSCCSCGGGCCHHHH
T ss_pred             ccccccc------------------------------------------------------cccccccCCCcCcCChHHh
Confidence            6532110                                                      0112234699999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhcCC--------CCCC----CCCHHHHHHHHHHhcc
Q 014344          257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET----FYRILCRP--------PDLV----GEPTPLRNLIRRLLEK  320 (426)
Q Consensus       257 ~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~----~~~i~~~~--------~~~~----~~~~~~~~li~~~L~~  320 (426)
                      .+. ++.++|||||||++|+|++|..||........    ...+....        ....    ..+..+.++|.+||..
T Consensus       208 ~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  286 (307)
T 2nru_A          208 RGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHE  286 (307)
T ss_dssp             TTE-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCS
T ss_pred             cCC-CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCC
Confidence            764 78999999999999999999999987543221    11111110        0111    1235688999999999


Q ss_pred             CCCCCCChHHHhcC
Q 014344          321 DPTKRIGVEEIKGH  334 (426)
Q Consensus       321 dP~~R~s~~eil~h  334 (426)
                      ||.+|||+++++++
T Consensus       287 ~p~~Rps~~~l~~~  300 (307)
T 2nru_A          287 KKNKRPDIKKVQQL  300 (307)
T ss_dssp             STTTSCCHHHHHHH
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999864

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1e-45  Score=368.21  Aligned_cols=252  Identities=17%  Similarity=0.201  Sum_probs=196.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC-CCcc----
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH-PLLP----   89 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv----   89 (426)
                      ...|++.+.||+|+||+||+|++..+|+.||||++.....          ......+.+.+|+.+++.+.| +++.    
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~----------~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~  146 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER----------PPSNAIKQMKEEVLRLRLLRGIKNQKQAKV  146 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC--------------CCHHHHHHHHGGGGSTTCCSHHHHHH
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC----------ccHHHHHHHHHHHHHHHhhccCCCHHHHHH
Confidence            3458899999999999999999999999999999852211          111235678889999999987 2211    


Q ss_pred             -----------------eeeeeeec-----CCeEEEEEeccCCCChHHHHHHh-----ccCCCCHHHHHHHHHHHHHHHH
Q 014344           90 -----------------RLRGVLST-----DKFVGYAIDYCPGRDLHSLRKQQ-----SEQMFSDDTIRFYAAELVLALE  142 (426)
Q Consensus        90 -----------------~l~~~~~~-----~~~~~lV~Ey~~gg~L~~l~~~~-----~~~~l~~~~~~~~~~qil~aL~  142 (426)
                                       .+..++..     ...++++|+++ +++|.++++..     ....+++..+..++.||+.||+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  225 (413)
T 3dzo_A          147 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLA  225 (413)
T ss_dssp             HTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHH
Confidence                             11111111     23467788876 69999987522     2334778889999999999999


Q ss_pred             HHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCC
Q 014344          143 YLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHS  222 (426)
Q Consensus       143 ~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (426)
                      |||++||+||||||+|||++.+|.+||+|||+++....                                          
T Consensus       226 ~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~------------------------------------------  263 (413)
T 3dzo_A          226 SLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------------------------------  263 (413)
T ss_dssp             HHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTE------------------------------------------
T ss_pred             HHHhCCcccCCcccceEEEecCCeEEEEeccceeecCC------------------------------------------
Confidence            99999999999999999999999999999999875421                                          


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccCCCCccchhh----------cCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 014344          223 PRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII----------EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET  292 (426)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  292 (426)
                                       .....+| +.|+|||++          .+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       264 -----------------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~  325 (413)
T 3dzo_A          264 -----------------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG  325 (413)
T ss_dssp             -----------------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC
T ss_pred             -----------------ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence                             1234468 999999999          555688999999999999999999999988776555


Q ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          293 FYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       293 ~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ...++...   ...+..+.+||.+||+.||.+|||+.++++||||+.+
T Consensus       326 ~~~~~~~~---~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          326 SEWIFRSC---KNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             SGGGGSSC---CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHhhc---ccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            44444332   3558999999999999999999999999999999765

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=5.7e-44  Score=346.05  Aligned_cols=246  Identities=20%  Similarity=0.271  Sum_probs=197.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh--cCCCCcceeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN--VEHPLLPRLRG   93 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~--l~hp~iv~l~~   93 (426)
                      ++|++.+.||+|+||+||+|++  +++.||||++...                ....+..|+++++.  ++||||+++++
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----------------~~~~~~~e~~~~~~~~l~h~ni~~~~~  103 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR----------------EERSWFREAEIYQTVMLRHENILGFIA  103 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG----------------GHHHHHHHHHHHHHSCCCCTTBCCEEE
T ss_pred             ccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch----------------hHHHHHHHHHHHHHhhcCCCcEEEEEe
Confidence            5799999999999999999997  5899999998432                12456678888888  78999999999


Q ss_pred             eeecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH--------HCCCcccCCCCCCeee
Q 014344           94 VLSTDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH--------NMGIVYRDLKPENIMI  161 (426)
Q Consensus        94 ~~~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH--------~~giiHrDlKp~NiLl  161 (426)
                      ++....    .+|+||||+++|+|.+++...   .+++..+..++.||+.||.|||        +.||+||||||+|||+
T Consensus       104 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll  180 (342)
T 1b6c_B          104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  180 (342)
T ss_dssp             EEECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred             eecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence            998776    899999999999999998653   4899999999999999999999        8999999999999999


Q ss_pred             ccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 014344          162 QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKS  241 (426)
Q Consensus       162 ~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (426)
                      +.++.+||+|||++.........                                                    .....
T Consensus       181 ~~~~~~kL~Dfg~~~~~~~~~~~----------------------------------------------------~~~~~  208 (342)
T 1b6c_B          181 KKNGTCCIADLGLAVRHDSATDT----------------------------------------------------IDIAP  208 (342)
T ss_dssp             CTTSCEEECCCTTCEEEETTTTE----------------------------------------------------EEECC
T ss_pred             CCCCCEEEEECCCceeccccccc----------------------------------------------------ccccc
Confidence            99999999999999765321100                                                    00012


Q ss_pred             cccccCCCCccchhhcCCC------CChhhHHHHHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHhcCC
Q 014344          242 NSFVGTEEYVAPEIIEGKG------HDFAVDWWSLGVVLHEMLYG----------ATPFRGSS-----RKETFYRILCRP  300 (426)
Q Consensus       242 ~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~ell~g----------~~pf~~~~-----~~~~~~~i~~~~  300 (426)
                      ...+||+.|+|||++.+..      ++.++|||||||++|+|++|          ..||....     .......+....
T Consensus       209 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  288 (342)
T 1b6c_B          209 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK  288 (342)
T ss_dssp             CSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred             ccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHH
Confidence            3446999999999998763      34789999999999999999          78987642     233333332211


Q ss_pred             --CCCC------CCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          301 --PDLV------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       301 --~~~~------~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                        +...      ..+..+.+||.+||+.||++|||+.+|++|
T Consensus       289 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence              1111      112468899999999999999999999976

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=3.2e-43  Score=333.07  Aligned_cols=223  Identities=14%  Similarity=0.111  Sum_probs=185.6

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +-.++|++++.||+|+||.||+|++..+++.||||++.....          ......+.+.+|+.+++.++||||++++
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~hp~iv~~~   97 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV----------LPDDVLQETLSRTLRLSRIDKPGVARVL   97 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC----------SCHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc----------cCHHHHHHHHHHHHHHhcCCCCCcceee
Confidence            344679999999999999999999999999999999954321          1223457788999999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++..++..|+|||||+|++|.++++.   + .....+..++.||+.||+|||++||+||||||+|||++.+|.+||+++
T Consensus        98 ~~~~~~~~~~lv~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~  173 (286)
T 3uqc_A           98 DVVHTRAGGLVVAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYP  173 (286)
T ss_dssp             EEEEETTEEEEEEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSC
T ss_pred             EEEEECCcEEEEEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEec
Confidence            999999999999999999999999743   2 456678889999999999999999999999999999999999999854


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |                                                                            |++
T Consensus       174 ~----------------------------------------------------------------------------~~~  177 (286)
T 3uqc_A          174 A----------------------------------------------------------------------------TMP  177 (286)
T ss_dssp             C----------------------------------------------------------------------------CCT
T ss_pred             c----------------------------------------------------------------------------ccC
Confidence            3                                                                            333


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHhcCCCC-----CCCCCHHHHHHHHHHhccCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY---RILCRPPD-----LVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~---~i~~~~~~-----~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      |       ++.++|||||||++|+|++|+.||.+.+..+...   +.......     ....+..+.+||.+||+.||.+
T Consensus       178 ~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  250 (286)
T 3uqc_A          178 D-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGI  250 (286)
T ss_dssp             T-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSC
T ss_pred             C-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCcc
Confidence            2       6889999999999999999999998876533111   11111111     1356788999999999999999


Q ss_pred             CCChHHHhc
Q 014344          325 RIGVEEIKG  333 (426)
Q Consensus       325 R~s~~eil~  333 (426)
                      | |+.|+++
T Consensus       251 R-s~~el~~  258 (286)
T 3uqc_A          251 R-SASTLLN  258 (286)
T ss_dssp             C-CHHHHHH
T ss_pred             C-CHHHHHH
Confidence            9 9999986

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.6e-43  Score=373.69  Aligned_cols=243  Identities=23%  Similarity=0.369  Sum_probs=197.9

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcC-CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVE-SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      +-.++|++++.||+|+||+||+|.+.. +++.||||++....            .......+..|+.+|+.++||||+++
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~hp~iv~~  144 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG------------DAEAQAMAMAERQFLAEVVHPSIVQI  144 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC------------CHHHHHHHHHHHGGGGGCCCTTBCCE
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC------------CHHHHHHHHHHHHHHHhcCCCCcCeE
Confidence            334789999999999999999999976 78999999984321            12345578889999999999999999


Q ss_pred             eeeeecCCe-----EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           92 RGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        92 ~~~~~~~~~-----~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ++++...+.     .|+|||||+|++|.+++..    .+++..+..++.||+.||.|||++|||||||||+|||++.+ .
T Consensus       145 ~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~  219 (681)
T 2pzi_A          145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-Q  219 (681)
T ss_dssp             EEEEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-C
T ss_pred             eeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-c
Confidence            999987655     7999999999999887543    59999999999999999999999999999999999999875 9


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||+++....                                                            ....+|
T Consensus       220 ~kl~DFG~a~~~~~------------------------------------------------------------~~~~~g  239 (681)
T 2pzi_A          220 LKLIDLGAVSRINS------------------------------------------------------------FGYLYG  239 (681)
T ss_dssp             EEECCCTTCEETTC------------------------------------------------------------CSCCCC
T ss_pred             EEEEecccchhccc------------------------------------------------------------CCccCC
Confidence            99999999876531                                                            123469


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+.|+|||++.+. ++.++|||||||++|+|++|.+||.+.....     +.........+..+.+||.+||..||.+||
T Consensus       240 t~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dP~~R~  313 (681)
T 2pzi_A          240 TPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG-----LPEDDPVLKTYDSYGRLLRRAIDPDPRQRF  313 (681)
T ss_dssp             CTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS-----CCTTCHHHHHCHHHHHHHHHHTCSSGGGSC
T ss_pred             CccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc-----ccccccccccCHHHHHHHhhhccCChhhCC
Confidence            9999999999775 4899999999999999999999987532110     000000011246789999999999999999


Q ss_pred             ChHHHhcCCCcC
Q 014344          327 GVEEIKGHEFFK  338 (426)
Q Consensus       327 s~~eil~hp~f~  338 (426)
                      +..+.+.|+|+.
T Consensus       314 ~~~~~l~~~l~~  325 (681)
T 2pzi_A          314 TTAEEMSAQLTG  325 (681)
T ss_dssp             SSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999999998874

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=1.1e-37  Score=321.31  Aligned_cols=239  Identities=14%  Similarity=0.121  Sum_probs=158.4

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCCCcceeeeeeecCCe
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKF  100 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~l~~~~~~~~~  100 (426)
                      ..++.|++|.+..++....|+.||+|++.+.......   .........+++.+|+++|+++ .|+||+++++++++++.
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~---~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~  316 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGIL---TAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS  316 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCS---CHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccc---hhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE
Confidence            3456788888888888889999999999765322110   0001123456799999999999 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCCC
Q 014344          101 VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       101 ~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~  180 (426)
                      +|||||||+|++|.+++...  +++++.   .|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+....
T Consensus       317 ~yLVMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          317 GWLVMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EEEEEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             EEEEEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            99999999999999998764  346654   4789999999999999999999999999999999999999999986532


Q ss_pred             CCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCC
Q 014344          181 KTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKG  260 (426)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  260 (426)
                      .                                                        .....+.+||+.|||||++.+. 
T Consensus       392 ~--------------------------------------------------------~~~~~t~vGTp~YmAPE~l~g~-  414 (569)
T 4azs_A          392 D--------------------------------------------------------CSWPTNLVQSFFVFVNELFAEN-  414 (569)
T ss_dssp             ----------------------------------------------------------CCSHHHHHHHHHHHHHHC----
T ss_pred             C--------------------------------------------------------CccccCceechhhccHHHhCCC-
Confidence            1                                                        1234567899999999999875 


Q ss_pred             CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCc
Q 014344          261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF  337 (426)
Q Consensus       261 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f  337 (426)
                      +..++|+||+|+++|+|.++..++.        ..+...+..    ...+.++...++..+|..|+.......|+|.
T Consensus       415 ~~~~~d~~s~g~~~~~l~~~~~~~~--------~~l~~~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  479 (569)
T 4azs_A          415 KSWNGFWRSAPVHPFNLPQPWSNWL--------YAVWQEPVE----RWNFVLLLALFEKKAKLPSAEQQRGATEQWI  479 (569)
T ss_dssp             --------------CCCCTTHHHHH--------HHHHTSCGG----GCSHHHHHHHHHTGGGSCCGGGSSCCHHHHH
T ss_pred             CCCcccccccccchhhhccccchhH--------HHhhcCCCC----CCcHHHHHHHHhCCCCCCCCChhhhccchhH
Confidence            6778999999999988876644331        111111111    1224566667777777777766655555544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.96  E-value=3.7e-30  Score=263.81  Aligned_cols=198  Identities=16%  Similarity=0.122  Sum_probs=146.1

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCC
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      ..+.||+|+||+||+|.  ..++.+|+|+...........     ......+++.+|+++|++++||||+.+..++....
T Consensus       340 ~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~-----~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~  412 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERL-----DENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD  412 (540)
T ss_dssp             --------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHH-----HHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT
T ss_pred             CCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhh-----hhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC
Confidence            45689999999999994  567899999874432211100     01113457899999999999999995555555677


Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCC
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                      ..|+|||||+|++|.+++..          +..++.||+.||+|||++||+||||||+|||++.  .+||+|||+++...
T Consensus       413 ~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          413 NKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN  480 (540)
T ss_dssp             TTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred             ccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence            77999999999999988653          5688999999999999999999999999999998  99999999998764


Q ss_pred             CCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC-
Q 014344          180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG-  258 (426)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  258 (426)
                      .......                                                 +......+++||+.|||||++.+ 
T Consensus       481 ~~~~~~~-------------------------------------------------~~~~~~~~~~GT~~y~APEv~~~~  511 (540)
T 3en9_A          481 LDEDKAV-------------------------------------------------DLIVFKKAVLSTHHEKFDEIWERF  511 (540)
T ss_dssp             CHHHHHH-------------------------------------------------HHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred             Ccccccc-------------------------------------------------chhhhhhhhcCCCCcCCHHHHHHH
Confidence            2100000                                                 00001245679999999999987 


Q ss_pred             -CCCChhhHHHHHHHHHHHHHhCCCCCC
Q 014344          259 -KGHDFAVDWWSLGVVLHEMLYGATPFR  285 (426)
Q Consensus       259 -~~~~~~~DiwSlG~il~ell~g~~pf~  285 (426)
                       ..|+..+|+||..+-..+...++.+|.
T Consensus       512 ~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          512 LEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence             678888999999988888887777663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.94  E-value=1.2e-27  Score=225.46  Aligned_cols=143  Identities=17%  Similarity=0.157  Sum_probs=109.1

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCC-------chhhHHHHHHHHHHHhcCCCCcce
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDN-------GDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      |++++.||+|+||.||+|.+ .+|+.||||++..........  .....       ......+.+|+.+|+.+.  | +.
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~--~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~  165 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKV--KEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA  165 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CC--CC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred             EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhh--hhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence            34449999999999999999 889999999996543211100  00000       013456889999999999  4 66


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +.+++.. +..|+|||||+|++|.++ .      .  ..+..++.||+.||.|||++||+||||||+|||++ +|.+||+
T Consensus       166 v~~~~~~-~~~~lvmE~~~g~~L~~l-~------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~  234 (282)
T 1zar_A          166 VPKVYAW-EGNAVLMELIDAKELYRV-R------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWII  234 (282)
T ss_dssp             SCCEEEE-ETTEEEEECCCCEEGGGC-C------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEEC
T ss_pred             cCeEEec-cceEEEEEecCCCcHHHc-c------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEE
Confidence            6665544 556999999999999872 1      1  23557999999999999999999999999999999 9999999


Q ss_pred             ccccccc
Q 014344          171 DFDLSTK  177 (426)
Q Consensus       171 DFgls~~  177 (426)
                      |||+|+.
T Consensus       235 DFG~a~~  241 (282)
T 1zar_A          235 DFPQSVE  241 (282)
T ss_dssp             CCTTCEE
T ss_pred             ECCCCeE
Confidence            9999863

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.88  E-value=8e-23  Score=189.99  Aligned_cols=151  Identities=16%  Similarity=0.186  Sum_probs=110.3

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCce--EEEEEeehhhHHhhh--hhccc---------CCCchhhHHHHHHHHHHHhcC
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSES--FALKVIWRDLIEKKS--KELTN---------NDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~--vAiK~~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~E~~il~~l~   84 (426)
                      |++.+.||+|+||.||+|.+..+|+.  ||||++.........  .....         .........+.+|+.+|+.+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999888999  999997543211110  00000         000011236788999999998


Q ss_pred             CCCc--ceeeeeeecCCeEEEEEeccCC-C----ChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCC
Q 014344           85 HPLL--PRLRGVLSTDKFVGYAIDYCPG-R----DLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH-NMGIVYRDLKP  156 (426)
Q Consensus        85 hp~i--v~l~~~~~~~~~~~lV~Ey~~g-g----~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH-~~giiHrDlKp  156 (426)
                      |+++  +.+++.    ...++||||+.+ |    +|.++...     .++..+..++.||+.||.||| +.||+||||||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp  199 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLSE  199 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence            8754  444442    356899999932 3    56554221     335678889999999999999 99999999999


Q ss_pred             CCeeeccCCcEEEecccccccCC
Q 014344          157 ENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       157 ~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                      +|||++.  .++|+|||+|....
T Consensus       200 ~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          200 YNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             TSEEESS--SEEECCCTTCEETT
T ss_pred             HHEEEcC--cEEEEECcccccCC
Confidence            9999998  99999999998653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.82  E-value=4.9e-21  Score=185.69  Aligned_cols=147  Identities=16%  Similarity=0.206  Sum_probs=102.4

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhh----hh-cccCCCch--hh--HHHHHHHHHHHhcCCCCc
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS----KE-LTNNDNGD--KY--RRISFEQRVLRNVEHPLL   88 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~----~~-~~~~~~~~--~~--~~~~~E~~il~~l~hp~i   88 (426)
                      |+|+..||+|++|.||+|.+. +|+.||||++......-+.    .. ........  ..  -....|...|.++.+.++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            899999999999999999984 6999999998643221110    00 00000000  00  112457777887765544


Q ss_pred             c--eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-
Q 014344           89 P--RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-  165 (426)
Q Consensus        89 v--~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-  165 (426)
                      .  ..++.  .  ..+|||||++|++|..+.        ..+.+..++.||+.+|.+||++|||||||||.|||++.+| 
T Consensus       176 ~vp~p~~~--~--~~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd  243 (397)
T 4gyi_A          176 PVPEPIAQ--S--RHTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD  243 (397)
T ss_dssp             SCCCEEEE--E--TTEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred             CCCeeeec--c--CceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence            3  22222  1  237999999999886542        2234567889999999999999999999999999999877 


Q ss_pred             ---------cEEEeccccccc
Q 014344          166 ---------HIMLVDFDLSTK  177 (426)
Q Consensus       166 ---------~ikL~DFgls~~  177 (426)
                               .+.|+||+-+..
T Consensus       244 ~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          244 AEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SSCTTSEEEEEEECCCTTCEE
T ss_pred             cccccccccceEEEEeCCccc
Confidence                     389999997764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.51  E-value=1.1e-13  Score=128.18  Aligned_cols=141  Identities=13%  Similarity=0.111  Sum_probs=112.4

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~   93 (426)
                      +..|++...+|.|+.+.||++..  .++.+++|+......             .....+..|+.+|+.+. +..++++++
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~-------------~~~~~~~~E~~~l~~l~~~~~vP~v~~   77 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK-------------GTTYDVEREKDMMLWLEGKLPVPKVLH   77 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT-------------TSTTCHHHHHHHHHHHTTTSCCCCEEE
T ss_pred             hccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC-------------CCHHHHHHHHHHHHHHhcCCCCCeEEE
Confidence            35699999999999999999974  368999999843211             01235778999999985 678889999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---------------------------
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN---------------------------  146 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~---------------------------  146 (426)
                      ++...+..|+||||++|.+|.+..       .+......++.++..+|..||+                           
T Consensus        78 ~~~~~~~~~lv~e~i~G~~l~~~~-------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (263)
T 3tm0_A           78 FERHDGWSNLLMSEADGVLCSEEY-------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL  150 (263)
T ss_dssp             EEEETTEEEEEEECCSSEEHHHHC-------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred             EEecCCceEEEEEecCCeehhhcc-------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence            999999999999999999987641       1222344678899999999999                           


Q ss_pred             --------------------------------CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          147 --------------------------------MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       147 --------------------------------~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                                                      ..++|+|++|.|||++.++.+.|+||+.+..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                            4589999999999998765667999998763

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.36  E-value=2.1e-12  Score=118.93  Aligned_cols=136  Identities=13%  Similarity=0.074  Sum_probs=100.5

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC--cceee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL--LPRLR   92 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~--iv~l~   92 (426)
                      +..|.+....+.|..+.||++.. .+|+.+++|+....                ....+..|+.+|+.+.+.+  +++++
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~----------------~~~~~~~E~~~l~~l~~~~~~vP~~~   81 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG----------------ALNELQDEAARLSWLATTGVPCAAVL   81 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC----------------TTSCHHHHHHHHHHHHTTTCCBCCEE
T ss_pred             cCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc----------------cchhhhHHHHHHHHHHhCCCCCCeEE
Confidence            44577765555677799999964 56778999997321                1235677999999986433  67789


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC------------------------
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG------------------------  148 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g------------------------  148 (426)
                      ++...++..|+||||++|.+|. + .     ....   ..++.++...|..||+..                        
T Consensus        82 ~~~~~~~~~~~v~e~i~G~~l~-~-~-----~~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (264)
T 1nd4_A           82 DVVTEAGRDWLLLGEVPGQDLL-S-S-----HLAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAG  151 (264)
T ss_dssp             EEEECSSCEEEEEECCSSEETT-T-S-----CCCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTT
T ss_pred             EeccCCCCCEEEEEecCCcccC-c-C-----cCCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcC
Confidence            9888888899999999998884 1 1     0121   245567777777777643                        


Q ss_pred             ----------------------------------CcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          149 ----------------------------------IVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       149 ----------------------------------iiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                                                        ++|||++|.|||++.++.+.|+||+.+..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          152 LVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             CCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                              99999999999998776677999999865

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.26  E-value=2.7e-11  Score=117.47  Aligned_cols=142  Identities=17%  Similarity=0.234  Sum_probs=107.0

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEee--hhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--CCCcceeee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIW--RDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--HPLLPRLRG   93 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~--~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~iv~l~~   93 (426)
                      ..-++.|+.|.++.||++...  +..+++|+..  .....            .....+.+|+.+|+.|.  +..+++++.
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~------------~~~~~~~~E~~~l~~L~~~~vpvP~~~~  105 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLL------------PSAHAIEREYRVMDALAGTDVPVAKMYA  105 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEECS--SCEEEEECCCC----------------------CHHHHHHHHHHHTTSSSCCCCEEE
T ss_pred             CceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCC------------CcHHHHHHHHHHHHHhhcCCCCCCcEEE
Confidence            345788999999999998853  4688899874  22110            11236777999999997  456788998


Q ss_pred             eeecC---CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH------------------------
Q 014344           94 VLSTD---KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN------------------------  146 (426)
Q Consensus        94 ~~~~~---~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~------------------------  146 (426)
                      ++.+.   +..|+||||++|..+.+-    ....+++.....++.+++.+|..||+                        
T Consensus       106 ~~~~~~~~g~~~~vme~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~  181 (359)
T 3dxp_A          106 LCEDESVIGRAFYIMEFVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIER  181 (359)
T ss_dssp             EECCTTTTSSCEEEEECCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHH
T ss_pred             ECCCCCccCCeEEEEEecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHH
Confidence            88766   458999999999888531    11237788888899999999999997                        


Q ss_pred             ----------------------------------CCCcccCCCCCCeeeccCCc--EEEeccccccc
Q 014344          147 ----------------------------------MGIVYRDLKPENIMIQENGH--IMLVDFDLSTK  177 (426)
Q Consensus       147 ----------------------------------~giiHrDlKp~NiLl~~~g~--ikL~DFgls~~  177 (426)
                                                        .+++|||++|.|||++.++.  +.|+||+.+..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          182 WTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                              36899999999999997753  68999998865

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.16  E-value=5.1e-11  Score=112.76  Aligned_cols=134  Identities=15%  Similarity=0.189  Sum_probs=99.4

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCC--cceeeeeeec
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPL--LPRLRGVLST   97 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~--iv~l~~~~~~   97 (426)
                      ++.++.|....||++.     ..+++|+....               .....+..|..+|+.+. +..  +++++.....
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~---------------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~   84 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS---------------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP   84 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH---------------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc---------------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC
Confidence            3458999999999864     56899986322               12356778999998884 332  4556555433


Q ss_pred             CC---eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH----------------------------
Q 014344           98 DK---FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN----------------------------  146 (426)
Q Consensus        98 ~~---~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~----------------------------  146 (426)
                      ..   ..|+||++++|.+|.....    ..++......++.|+...|..||+                            
T Consensus        85 ~~~~~~~~~vm~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (304)
T 3sg8_A           85 SETYQMSFAGFTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKL  160 (304)
T ss_dssp             CSSCSCSCEEEECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcceEEEcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHH
Confidence            33   3589999999998875322    127788888888999999999986                            


Q ss_pred             ------------------------------CCCcccCCCCCCeeecc--CCcEEEecccccccC
Q 014344          147 ------------------------------MGIVYRDLKPENIMIQE--NGHIMLVDFDLSTKL  178 (426)
Q Consensus       147 ------------------------------~giiHrDlKp~NiLl~~--~g~ikL~DFgls~~~  178 (426)
                                                    ..++|+|++|.||+++.  .+.+.|+||+.+..-
T Consensus       161 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          161 LSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             HTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             hcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence                                          13699999999999998  456789999987653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.83  E-value=5.4e-08  Score=91.97  Aligned_cols=134  Identities=16%  Similarity=0.187  Sum_probs=94.6

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC---Ccceeeeeee-
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP---LLPRLRGVLS-   96 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp---~iv~l~~~~~-   96 (426)
                      ++.++.|....||++     ++.+++|+....               .....+..|..+|+.|.+.   .+++++.+.. 
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~~---------------~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~   83 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKSQ---------------QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR   83 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESSH---------------HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCCc---------------hHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc
Confidence            455789999999988     577899986221               2345678899999999742   3667777664 


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-----------------------------
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM-----------------------------  147 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~-----------------------------  147 (426)
                      ..+..|+|||+++|.+|....-    ..++......++.|+...|..||+.                             
T Consensus        84 ~~g~~~~v~e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~  159 (306)
T 3tdw_A           84 SDGNPFVGYRKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQ  159 (306)
T ss_dssp             TTSCEEEEEECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEeccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHh
Confidence            4566789999999988865311    1144555555555555555555542                             


Q ss_pred             -------------------------------CCcccCCCCCCeeecc---CCcE-EEecccccccC
Q 014344          148 -------------------------------GIVYRDLKPENIMIQE---NGHI-MLVDFDLSTKL  178 (426)
Q Consensus       148 -------------------------------giiHrDlKp~NiLl~~---~g~i-kL~DFgls~~~  178 (426)
                                                     .++|+|++|.|||++.   ++.+ .|+||+.+..-
T Consensus       160 ~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          160 VFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             TGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             cccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                                           3599999999999987   4554 89999987653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.80  E-value=8.1e-08  Score=88.77  Aligned_cols=132  Identities=16%  Similarity=0.150  Sum_probs=96.2

Q ss_pred             ecccCce-EEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeeecCCeE
Q 014344           24 LGRGAKG-VVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLSTDKFV  101 (426)
Q Consensus        24 LG~G~~g-~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~~~  101 (426)
                      +..|..+ .||.......+..+.+|+-...                ....+..|..+|+.|. +--+++++.+..+++..
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----------------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~   95 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS----------------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDA   95 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH----------------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC----------------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeE
Confidence            3445444 7999888777888999986432                2345677999999885 33478899999999999


Q ss_pred             EEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC----------------------------------
Q 014344          102 GYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNM----------------------------------  147 (426)
Q Consensus       102 ~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~----------------------------------  147 (426)
                      |+|||+++|.++.+.....      ......+..++...|..||+.                                  
T Consensus        96 ~lvme~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (272)
T 4gkh_A           96 WLLTTAIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDD  169 (272)
T ss_dssp             EEEEECCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCG
T ss_pred             EEEEEeeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccc
Confidence            9999999998887654321      112233455555666666632                                  


Q ss_pred             ------------------------CCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          148 ------------------------GIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       148 ------------------------giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                                              .++|+|+.|.|||++.++.+-|+||+.+..
T Consensus       170 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          170 ERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             GGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                                    268999999999999877778999998875

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.41  E-value=1.1e-06  Score=85.97  Aligned_cols=83  Identities=17%  Similarity=0.152  Sum_probs=51.8

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhH-HhhhhhcccCCCchhhHHHHHHHHHHHhcCC--C-Ccceeeeee
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLI-EKKSKELTNNDNGDKYRRISFEQRVLRNVEH--P-LLPRLRGVL   95 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--p-~iv~l~~~~   95 (426)
                      -++.||.|..+.||++....+++.++||......- ...       .......++..|.++|+.+..  | .+++++.+ 
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~-------~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-  105 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGE-------SWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-  105 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC--------------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCC-------CCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-
Confidence            46789999999999998766678999998642110 000       001123456779999988742  3 45566654 


Q ss_pred             ecCCeEEEEEeccCCC
Q 014344           96 STDKFVGYAIDYCPGR  111 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg  111 (426)
                       +....++||||++|.
T Consensus       106 -d~~~~~lvmE~l~g~  120 (397)
T 2olc_A          106 -DTEMAVTVMEDLSHL  120 (397)
T ss_dssp             -ETTTTEEEECCCTTS
T ss_pred             -cCCccEEEEEeCCCc
Confidence             344568999999864

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.40  E-value=4.2e-06  Score=79.65  Aligned_cols=138  Identities=17%  Similarity=0.177  Sum_probs=80.5

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--CCCcceeee----
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--HPLLPRLRG----   93 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~iv~l~~----   93 (426)
                      -++.|+.|..+.||++...  +..+++|+....                 ...+..|..+++.|.  .-.+++++.    
T Consensus        36 ~~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~-----------------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g   96 (346)
T 2q83_A           36 KIDVIQGNQMALVWKVHTD--SGAVCLKRIHRP-----------------EKKALFSIFAQDYLAKKGMNVPGILPNKKG   96 (346)
T ss_dssp             EEEECC----CEEEEEEET--TEEEEEEEECSC-----------------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTS
T ss_pred             EeeeccccccCcEEEEEeC--CCCEEEEecCCC-----------------HHHHHHHHHHHHHHHHcCCCCCceeecCCC
Confidence            3456677788999999753  345999998431                 122334566666553  123444443    


Q ss_pred             --eeecCCeEEEEEeccCCCChH-----H------H---HHHhccCCC--C-----------HH--------H-------
Q 014344           94 --VLSTDKFVGYAIDYCPGRDLH-----S------L---RKQQSEQMF--S-----------DD--------T-------  129 (426)
Q Consensus        94 --~~~~~~~~~lV~Ey~~gg~L~-----~------l---~~~~~~~~l--~-----------~~--------~-------  129 (426)
                        +....+..+++|+|++|..+.     .      .   ++..... +  +           ..        .       
T Consensus        97 ~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  175 (346)
T 2q83_A           97 SLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVG-YQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLM  175 (346)
T ss_dssp             CSCEEETTEEEEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTT-CCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCEEEEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCC-CCCCccchhcccccchHHHHHHHHHHHHHHHHH
Confidence              123467789999999986542     1      0   1111110 1  1           00        0       


Q ss_pred             ----------------HHHHHHHHHHHHHHHHH-------------CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          130 ----------------IRFYAAELVLALEYLHN-------------MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       130 ----------------~~~~~~qil~aL~~LH~-------------~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                                      +..+..++..++++|++             .+++|+|+++.|||++.++.+.|+||+.+..
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          176 AEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence                            11122234445666652             5799999999999998888999999998763

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.32  E-value=8.9e-07  Score=85.24  Aligned_cols=87  Identities=16%  Similarity=0.160  Sum_probs=57.1

Q ss_pred             cEEEeee-cccCceEEEEEEEc--C----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-C--CC
Q 014344           18 LRIVSAL-GRGAKGVVFLVKDV--E----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-H--PL   87 (426)
Q Consensus        18 y~i~~~L-G~G~~g~V~~a~~~--~----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h--p~   87 (426)
                      ...++.| +.|....+|++...  .    +++.+++|+......      ...    .....+..|+.+|+.|. +  ..
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~------~~~----~~~~~~~~E~~~l~~L~~~~~vp   91 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAED------VPV----FPTYRLDHQFEVIRLVGELTDVP   91 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGG------CCS----SSCCCHHHHHHHHHHHHHHCCSC
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCc------ccc----CchhHHHHHHHHHHHHhhcCCCC
Confidence            3456778 89999999998753  1    256789998633210      000    00135677888888885 3  35


Q ss_pred             cceeeeeeecC---CeEEEEEeccCCCChH
Q 014344           88 LPRLRGVLSTD---KFVGYAIDYCPGRDLH  114 (426)
Q Consensus        88 iv~l~~~~~~~---~~~~lV~Ey~~gg~L~  114 (426)
                      +++++.+..+.   +..|+||||++|..+.
T Consensus        92 vP~v~~~~~~~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A           92 VPRVRWIETTGDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             CCCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred             CCcEEEEccCCCccCCceEEEEecCCCChh
Confidence            77888877655   3568999999986653

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.03  E-value=4.6e-05  Score=71.88  Aligned_cols=77  Identities=13%  Similarity=0.101  Sum_probs=60.7

Q ss_pred             EEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC---CCCcceeeeee
Q 014344           19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE---HPLLPRLRGVL   95 (426)
Q Consensus        19 ~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~l~~~~   95 (426)
                      .-++.|+.|....+|++..  +++.+++|+....                ....+..|...|+.|.   ...+++++.+.
T Consensus        39 ~~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~----------------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~  100 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND--EVQTVFVKINERS----------------YRSMFRAEADQLALLAKTNSINVPLVYGIG  100 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES--SSCEEEEEEEEGG----------------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEE
T ss_pred             eeeEEeCCccceeeeEEEE--CCCeEEEEeCCcc----------------cHHHHHHHHHHHHHHHhhCCCCcceEEEEe
Confidence            3467789999999999985  4678899987432                1345777989998884   35788999888


Q ss_pred             ecCCeEEEEEeccCCCCh
Q 014344           96 STDKFVGYAIDYCPGRDL  113 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L  113 (426)
                      ...+..|+||||++|..+
T Consensus       101 ~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A          101 NSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             ECSSEEEEEEECCCCCCC
T ss_pred             ecCCceEEEEEeccCCCC
Confidence            888899999999998765

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.89  E-value=3.7e-05  Score=75.68  Aligned_cols=32  Identities=16%  Similarity=0.351  Sum_probs=28.0

Q ss_pred             HHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       145 H~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      +...++|+|++|.|||++.++ +.|+||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            346899999999999998777 99999998865

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.77  E-value=7e-05  Score=70.14  Aligned_cols=134  Identities=15%  Similarity=0.140  Sum_probs=76.8

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeeeeeecCC
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRGVLSTDK   99 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~~~~~~~   99 (426)
                      ++.|+.|....+|++      +.+++|+.....              ...-....|..+++.+. +.-.+++++..  ..
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~--------------~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~   80 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGT--------------EEYINRANEAVAAREAAKAGVSPEVLHVD--PA   80 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC------------------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCc--------------cceeCHHHHHHHHHHHHHcCCCCceEEEE--CC
Confidence            788999999999998      578999874321              01112345888888775 22225676654  33


Q ss_pred             eEEEEEecc-CCCChHHH---------------HHH-hc-cCCCC-----HHHHHHHHHH--------------HHHHHH
Q 014344          100 FVGYAIDYC-PGRDLHSL---------------RKQ-QS-EQMFS-----DDTIRFYAAE--------------LVLALE  142 (426)
Q Consensus       100 ~~~lV~Ey~-~gg~L~~l---------------~~~-~~-~~~l~-----~~~~~~~~~q--------------il~aL~  142 (426)
                      .-++++||+ +|.+|...               +.+ +. ...++     ...+..+..+              +...+.
T Consensus        81 ~~~~v~e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  160 (301)
T 3dxq_A           81 TGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAG  160 (301)
T ss_dssp             TCCEEEECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHH
T ss_pred             CCEEEEeecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHH
Confidence            346899999 76554310               110 00 00011     1111112111              111122


Q ss_pred             HHH----H----CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          143 YLH----N----MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       143 ~LH----~----~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      .|.    .    ..++|+|+.|.||+ ..++.+.|+||..+..
T Consensus       161 ~l~~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          161 GVRSALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             HHHHHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            221    1    24899999999999 5677889999998764

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.66  E-value=0.00024  Score=66.99  Aligned_cols=145  Identities=17%  Similarity=0.218  Sum_probs=82.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC--cceeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL--LPRLRG   93 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~--iv~l~~   93 (426)
                      ....-++.|+.|....+|++...  +..+++|+.....               ....+..|..+++.|...+  +++++.
T Consensus        22 ~~~~~~~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~~---------------~~~~l~~e~~~l~~L~~~g~~vP~~~~   84 (322)
T 2ppq_A           22 GSLTSYKGIAEGVENSNFLLHTT--KDPLILTLYEKRV---------------EKNDLPFFLGLMQHLAAKGLSCPLPLP   84 (322)
T ss_dssp             CCEEEEEEECC---EEEEEEEES--SCCEEEEEECC------------------CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CcceEeeccCCCcccceEEEEeC--CccEEEEEeCCCC---------------CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence            34445677888999999999753  3368899884310               1234556888887774212  344442


Q ss_pred             e------eecCCeEEEEEeccCCCChHH-----H---------HHHhccC---C----CCHHHHHH--------------
Q 014344           94 V------LSTDKFVGYAIDYCPGRDLHS-----L---------RKQQSEQ---M----FSDDTIRF--------------  132 (426)
Q Consensus        94 ~------~~~~~~~~lV~Ey~~gg~L~~-----l---------~~~~~~~---~----l~~~~~~~--------------  132 (426)
                      .      ....+..+++|+|++|..+..     +         ++.....   .    .....-..              
T Consensus        85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  164 (322)
T 2ppq_A           85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK  164 (322)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred             CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence            2      123456789999999865311     0         1111100   0    00000000              


Q ss_pred             -HHHHHHHHHHHHHH-------CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          133 -YAAELVLALEYLHN-------MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       133 -~~~qil~aL~~LH~-------~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                       +...+...++.+++       .+++|+|+++.|||++.++.+.|+||+.+..
T Consensus       165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence             00113444555553       3799999999999998776668999998764

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.66  E-value=0.00043  Score=64.21  Aligned_cols=80  Identities=15%  Similarity=0.115  Sum_probs=56.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC---CCcceee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH---PLLPRLR   92 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h---p~iv~l~   92 (426)
                      ....-++.+|.|..+.||+++. .+|+.|.+|+.....             ......+..|...|+.|..   --+++++
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~-------------~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~   80 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA-------------PALDGLFRAEALGLDWLGRSFGSPVPQVA   80 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC-------------CCCTTHHHHHHHHHHHHTCSTTCCSCCEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCC-------------cchhhHHHHHHHHHHHHHhhCCCCcceEE
Confidence            4467788999999999999985 578899999863211             1122356779999998852   2455666


Q ss_pred             eeeecCCeEEEEEeccCCCCh
Q 014344           93 GVLSTDKFVGYAIDYCPGRDL  113 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L  113 (426)
                      .+.  +  -++||||++++..
T Consensus        81 ~~~--~--~~lv~e~l~~~~~   97 (288)
T 3f7w_A           81 GWD--D--RTLAMEWVDERPP   97 (288)
T ss_dssp             EEE--T--TEEEEECCCCCCC
T ss_pred             ecc--C--ceEEEEeecccCC
Confidence            542  2  3789999987653

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.61  E-value=0.00089  Score=58.84  Aligned_cols=136  Identities=13%  Similarity=0.048  Sum_probs=88.5

Q ss_pred             CChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-HCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcch
Q 014344          111 RDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH-NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT  189 (426)
Q Consensus       111 g~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH-~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~  189 (426)
                      -+|.++++.. ++++++++++.++.|.+.+|.-+- ...-..+=+-|..|+|..+|.|-+.+ ..+..            
T Consensus        33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~~------------   98 (229)
T 2yle_A           33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADDA------------   98 (229)
T ss_dssp             EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred             ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-ccccc------------
Confidence            4688887665 467999999999999999987762 12212344557889999999888774 21110            


Q ss_pred             hhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHH
Q 014344          190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWS  269 (426)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  269 (426)
                                                                              ....+.|||... ...+.+.=|+|
T Consensus        99 --------------------------------------------------------~~~~~~~pe~~~-~~~te~~~Iys  121 (229)
T 2yle_A           99 --------------------------------------------------------GEPPPVAGKLGY-SQCMETEVIES  121 (229)
T ss_dssp             ----------------------------------------------------------------CCSS-SSSCHHHHHHH
T ss_pred             --------------------------------------------------------cccCCCChhhcc-ccchHHHHHHH
Confidence                                                                    112356777763 34568899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHhcc-------------------------CCCC
Q 014344          270 LGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEK-------------------------DPTK  324 (426)
Q Consensus       270 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~li~~~L~~-------------------------dP~~  324 (426)
                      ||+++|..+--..|=                ......++++.+||..|..-                         .+..
T Consensus       122 LG~tLY~ALDygL~e----------------~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~  185 (229)
T 2yle_A          122 LGIIIYKALDYGLKE----------------NEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISA  185 (229)
T ss_dssp             HHHHHHHHHTTTCCT----------------TEEECCCHHHHHHHHHHTTCCC--------------------CCSCCCC
T ss_pred             HHHHHHHHhhcCCCc----------------ccchhhCHHHHHHHHHHHhcccccccccccccccccccccccccccccC
Confidence            999999988422221                12234478899999988755                         2467


Q ss_pred             CCChHHHhc
Q 014344          325 RIGVEEIKG  333 (426)
Q Consensus       325 R~s~~eil~  333 (426)
                      |.++++|++
T Consensus       186 ~~sl~~Vi~  194 (229)
T 2yle_A          186 IRSYRDVMK  194 (229)
T ss_dssp             CCSHHHHHH
T ss_pred             cCCHHHHHH
Confidence            788888774

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.55  E-value=0.00025  Score=67.26  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=27.8

Q ss_pred             CCCcccCCCCCCeeeccC----CcEEEecccccccC
Q 014344          147 MGIVYRDLKPENIMIQEN----GHIMLVDFDLSTKL  178 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~----g~ikL~DFgls~~~  178 (426)
                      ..++|||+.+.|||++.+    +.+.|+||+.+..-
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            479999999999999874    68999999988754

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.53  E-value=0.00027  Score=69.76  Aligned_cols=75  Identities=24%  Similarity=0.414  Sum_probs=50.3

Q ss_pred             EEeeecccCceEEEEEEEcC-------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           20 IVSALGRGAKGVVFLVKDVE-------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      -++.|+.|....||++....       .++.+.+|+....             .  ....+..|..+++.|. +...+++
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-------------~--~~~~li~E~~~l~~L~~~g~~P~l  141 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-------------E--TESHLVAESVIFTLLSERHLGPKL  141 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-------------C--CHHHHHHHHHHHHHHHHTTSSSCE
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-------------C--cHHHHHHHHHHHHHHHhCCCCCcE
Confidence            35678889899999998643       2578999987221             0  0123446888888885 3334778


Q ss_pred             eeeeecCCeEEEEEeccCCCCh
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDL  113 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L  113 (426)
                      ++.+.+    .+|+||++|.+|
T Consensus       142 ~~~~~~----g~v~e~l~G~~l  159 (429)
T 1nw1_A          142 YGIFSG----GRLEEYIPSRPL  159 (429)
T ss_dssp             EEEETT----EEEECCCCEEEC
T ss_pred             EEEeCC----CEEEEEeCCccc
Confidence            877643    389999987443

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.52  E-value=0.00024  Score=68.73  Aligned_cols=146  Identities=21%  Similarity=0.301  Sum_probs=87.5

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcC-------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVE-------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-   84 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-   84 (426)
                      +..+.+++ +.|..|-...+|++....       .++.|.+|+.-...              .......+|..+++.|. 
T Consensus        48 ~~~~~l~v-~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--------------~~~~~~~rE~~vl~~L~~  112 (379)
T 3feg_A           48 VQPEELRV-YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--------------QGVDSLVLESVMFAILAE  112 (379)
T ss_dssp             CCGGGCCC-EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----------------CCHHHHHHHHHHHHHHHH
T ss_pred             CCcCceEE-EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--------------chHHHHHHHHHHHHHHHh
Confidence            33445553 567778888999998642       35789999862210              11234457999998885 


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHH-----------H---HHHh-c-----cCCC--CHHHHHHHHHHHHH---
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-----------L---RKQQ-S-----EQMF--SDDTIRFYAAELVL---  139 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~-----------l---~~~~-~-----~~~l--~~~~~~~~~~qil~---  139 (426)
                      +.-.+++++++.+    .+||||++|..|..           +   +... .     .+..  -...+..+..++-.   
T Consensus       113 ~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~  188 (379)
T 3feg_A          113 RSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPP  188 (379)
T ss_dssp             TTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccC
Confidence            4444778877654    39999999855421           1   1111 1     1111  13556666655422   


Q ss_pred             ----------------HHHHHH----H----CCCcccCCCCCCeeeccC----CcEEEeccccccc
Q 014344          140 ----------------ALEYLH----N----MGIVYRDLKPENIMIQEN----GHIMLVDFDLSTK  177 (426)
Q Consensus       140 ----------------aL~~LH----~----~giiHrDlKp~NiLl~~~----g~ikL~DFgls~~  177 (426)
                                      .++.|.    .    ..++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       189 ~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          189 TGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             CSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             cccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence                            233333    2    259999999999999876    7899999998865

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.42  E-value=0.00042  Score=66.76  Aligned_cols=76  Identities=17%  Similarity=0.199  Sum_probs=46.1

Q ss_pred             EEeeecccCceEEEEEEEcC--------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC-cce
Q 014344           20 IVSALGRGAKGVVFLVKDVE--------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-LPR   90 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~--------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~   90 (426)
                      -++.|+.|....+|++....        .++.+++|+.....              ........|..+++.|...+ .++
T Consensus        37 ~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--------------~~~~~~~~E~~~l~~L~~~g~~P~  102 (369)
T 3c5i_A           37 RVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--------------DELYNTISEFEVYKTMSKYKIAPQ  102 (369)
T ss_dssp             EEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--------------GGTSCHHHHHHHHHHHHHTTSSCC
T ss_pred             EEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--------------cceecHHHHHHHHHHHHhcCCCCc
Confidence            35678888889999998643        13688999874321              01112356888888885323 567


Q ss_pred             eeeeeecCCeEEEEEeccCCCCh
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDL  113 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L  113 (426)
                      +++.+  .+  ++||||++|..+
T Consensus       103 ~~~~~--~~--~~v~e~i~G~~l  121 (369)
T 3c5i_A          103 LLNTF--NG--GRIEEWLYGDPL  121 (369)
T ss_dssp             EEEEE--TT--EEEEECCCSEEC
T ss_pred             eEEec--CC--cEEEEEecCCcC
Confidence            77665  22  689999997543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.41  E-value=0.0016  Score=64.67  Aligned_cols=76  Identities=12%  Similarity=0.197  Sum_probs=49.3

Q ss_pred             EEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC-cceeeeeeecC
Q 014344           20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-LPRLRGVLSTD   98 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~~~~~   98 (426)
                      -++.|+.|-...+|++.....++.+++|+.....              ...-....|..+|+.|...+ .+++++++.  
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--------------~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--  175 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--------------DEIINREREKKISCILYNKNIAKKIYVFFT--  175 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-C--------------CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--------------hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--
Confidence            3567888999999999875445789999873210              00111246899999987444 467888773  


Q ss_pred             CeEEEEEeccCCCCh
Q 014344           99 KFVGYAIDYCPGRDL  113 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L  113 (426)
                      +  .+||||++|.+|
T Consensus       176 ~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          176 N--GRIEEFMDGYAL  188 (458)
T ss_dssp             T--EEEEECCCSEEC
T ss_pred             C--eEEEEeeCCccC
Confidence            2  359999987444

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.37  E-value=0.0011  Score=62.58  Aligned_cols=138  Identities=17%  Similarity=0.165  Sum_probs=78.2

Q ss_pred             eeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC--Ccceeeee-----
Q 014344           22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP--LLPRLRGV-----   94 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp--~iv~l~~~-----   94 (426)
                      ..|+ |....||++.. .+|+.+++|+.....              .....+..|..+++.|...  .+++++..     
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~--------------~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~   95 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPER--------------WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTL   95 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTT--------------SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSC
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCC--------------CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEE
Confidence            4566 88889998764 346689999984221              0123556688888877422  24444443     


Q ss_pred             eecCCeEEEEEeccCCCChH-----HH---------HHHhc-c------CCCCHHHH----------------------H
Q 014344           95 LSTDKFVGYAIDYCPGRDLH-----SL---------RKQQS-E------QMFSDDTI----------------------R  131 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~-----~l---------~~~~~-~------~~l~~~~~----------------------~  131 (426)
                      ....+..+++|++++|..+.     .+         ++... .      ..++....                      .
T Consensus        96 ~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  175 (328)
T 1zyl_A           96 LNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFL  175 (328)
T ss_dssp             EEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHH
T ss_pred             EEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHH
Confidence            22355678999999875431     11         11110 0      01111110                      1


Q ss_pred             HHHHHHHHHHHHH----HHCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          132 FYAAELVLALEYL----HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       132 ~~~~qil~aL~~L----H~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      ..+.+++..+.-+    ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       176 ~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          176 KATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             HHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             HHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            1111222222221    123589999999999998 4 899999998764

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.93  E-value=0.0036  Score=59.54  Aligned_cols=32  Identities=16%  Similarity=0.350  Sum_probs=28.1

Q ss_pred             CCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344          147 MGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      ..++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            36999999999999998889999999877653

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.47  E-value=0.022  Score=55.81  Aligned_cols=139  Identities=17%  Similarity=0.302  Sum_probs=84.7

Q ss_pred             EEeeecccCceEEEEEEEcCC-------CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCccee
Q 014344           20 IVSALGRGAKGVVFLVKDVES-------SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRL   91 (426)
Q Consensus        20 i~~~LG~G~~g~V~~a~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l   91 (426)
                      -++.|..|-...+|++.....       ++.|++|+.....              +..-...+|..+++.|. +.-.+++
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--------------~~~idR~~E~~~l~~L~~~gi~P~l  139 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--------------GKFYDSKVELDVFRYLSNINIAPNI  139 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---------------CCCCHHHHHHHHHHHHHTTSSCCE
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--------------chhcCHHHHHHHHHHHHhcCCCCCE
Confidence            456677788899999987521       5789999863210              11112345888888885 4445677


Q ss_pred             eeeeecCCeEEEEEeccCCCChHH-----------H---H---HHh-c----------cCCCCHHHHHHHHHHH------
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHS-----------L---R---KQQ-S----------EQMFSDDTIRFYAAEL------  137 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~-----------l---~---~~~-~----------~~~l~~~~~~~~~~qi------  137 (426)
                      ++.+.  +  ++||||++|..|..           +   +   +.. .          ..+.....+..+..++      
T Consensus       140 ~~~~~--~--~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~  215 (424)
T 3mes_A          140 IADFP--E--GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSK  215 (424)
T ss_dssp             EEEET--T--EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcC--C--CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcc
Confidence            76543  2  78999999865321           0   0   000 0          0111134444444332      


Q ss_pred             -------------HHHHHHHH------------------------HCCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          138 -------------VLALEYLH------------------------NMGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       138 -------------l~aL~~LH------------------------~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                                   ...++.|.                        ...++|+|+.+.||+ +.++.+.|+||..+..
T Consensus       216 ~~~~~~~~~~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          216 NNFQIDKELYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             CC--CCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             cchhhccccHHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence                         12233332                        125899999999999 7788999999998864

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.20  E-value=0.088  Score=51.05  Aligned_cols=30  Identities=30%  Similarity=0.523  Sum_probs=25.6

Q ss_pred             CCcccCCCCCCeee------ccCCcEEEeccccccc
Q 014344          148 GIVYRDLKPENIMI------QENGHIMLVDFDLSTK  177 (426)
Q Consensus       148 giiHrDlKp~NiLl------~~~g~ikL~DFgls~~  177 (426)
                      .++|+|+.+.|||+      +.++.+.++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36899999999999      3467899999998865

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=87.88  E-value=1.1  Score=38.99  Aligned_cols=85  Identities=11%  Similarity=0.082  Sum_probs=59.2

Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE  163 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~  163 (426)
                      .||+++.. .+-++++.+.+.++.-.  ...++-.-   +.++.....+++.+|+....+++.  =+|=-|+|+||+++.
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~~--r~tf~L~P~NL~f~~  114 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNRT--RYTFVLAPDELFFTR  114 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGGS--SEECCCSGGGEEECT
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhcC--ceEEEEecceEEEcC
Confidence            47888876 56667777766666543  22222211   127788888888888887754433  366678999999999


Q ss_pred             CCcEEEecccccc
Q 014344          164 NGHIMLVDFDLST  176 (426)
Q Consensus       164 ~g~ikL~DFgls~  176 (426)
                      ++.+++.--|+-.
T Consensus       115 ~~~p~i~~RGik~  127 (215)
T 4ann_A          115 DGLPIAKTRGLQN  127 (215)
T ss_dssp             TSCEEESCCEETT
T ss_pred             CCCEEEEEccCcc
Confidence            9999999888644

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=84.92  E-value=1.9  Score=37.65  Aligned_cols=88  Identities=15%  Similarity=0.070  Sum_probs=60.7

Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHH-HHHHCCCcccCCCCCCeeec
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALE-YLHNMGIVYRDLKPENIMIQ  162 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~-~LH~~giiHrDlKp~NiLl~  162 (426)
                      .||++  -..+-.+++.+.+.++.-+++.=+.-++     .++.....+++.+|+.... +++  .-+|=-|+|+||+++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~--~r~tf~l~P~NL~f~  118 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSA--RRLIFIVCPENLMFN  118 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCS--SSEECCCCGGGEEEC
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhh--CceeEEEeCceEEEe
Confidence            47888  3344467777777777653332222222     2778888888887777655 333  346667899999999


Q ss_pred             cCCcEEEecccccccCCC
Q 014344          163 ENGHIMLVDFDLSTKLSP  180 (426)
Q Consensus       163 ~~g~ikL~DFgls~~~~~  180 (426)
                      .++.+++.-.|+-..+.|
T Consensus       119 ~~~~p~i~hRGi~~~lpP  136 (219)
T 4ano_A          119 RALEPFFLHVGVKESLPP  136 (219)
T ss_dssp             TTCCEEESCCEETTTBSS
T ss_pred             CCCcEEEEEcCCcccCCC
Confidence            999999999998665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	426
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-58
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-54
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-54
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-53
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-53
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-53
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-53
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-52
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-51
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-50
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-49
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-48
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-47
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-47
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-47
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-47
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-46
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-45
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-44
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-43
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-43
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-43
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-41
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-41
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-40
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-40
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-40
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-39
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-39
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-39
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-39
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-39
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-38
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-37
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-37
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-37
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-37
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-36
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-36
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-36
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	8e-36
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-35
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-35
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-35
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-34
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-33
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-32
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-33
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-33
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-32
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-32
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-27
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-31
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-31
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-30
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-29
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-23
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-28
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-27
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-28
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-27
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-26
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-25
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-25
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-24
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-24
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-22
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	9e-19
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-17

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (485), Expect = 1e-58
 Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 71/322 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            I   LG+G  G V+L ++ +S    ALKV+++  +EK   E           ++  E  
Sbjct: 9   EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE----------HQLRREVE 58

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +  ++ HP + RL G       V   ++Y P   ++   ++ S+  F +     Y  EL 
Sbjct: 59  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 116

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            AL Y H+  +++RD+KPEN+++   G +                               
Sbjct: 117 NALSYCHSKRVIHRDIKPENLLLGSAGEL------------------------------- 145

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                    K    G S+  P                  S +  +  GT +Y+ PE+IEG
Sbjct: 146 ---------KIADFGWSVHAP------------------SSRRTTLCGTLDYLPPEMIEG 178

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-PTPLRNLIRRL 317
           + HD  VD WSLGV+ +E L G  PF  ++ +ET+ RI               R+LI RL
Sbjct: 179 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL 238

Query: 318 LEKDPTKRIGVEEIKGHEFFKG 339
           L+ +P++R  + E+  H +   
Sbjct: 239 LKHNPSQRPMLREVLEHPWITA 260

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 3e-54
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 75/344 (21%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  LG+G  G V LV++  +   +A+K++ +++I  K          D+      E R
Sbjct: 8   DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTESR 57

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           VL+N  HP L  L+    T   + + ++Y  G +L     ++  ++F+++  RFY AE+V
Sbjct: 58  VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIV 115

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            ALEYLH+  +VYRD+K EN+M+ ++GHI                               
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHI------------------------------- 144

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                    K    G+                 +          +F GT EY+APE++E 
Sbjct: 145 ---------KITDFGLC----------------KEGISDGATMKTFCGTPEYLAPEVLED 179

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-PTPLRNLIRRL 317
             +  AVDWW LGVV++EM+ G  PF     +  F  IL              ++L+  L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 239

Query: 318 LEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
           L+KDP +R+G      +E+  H FF  +NW+ ++ K   PP  P
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (455), Expect = 6e-54
 Identities = 73/341 (21%), Positives = 130/341 (38%), Gaps = 69/341 (20%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
                LG G   VV   ++  +   +A K I       K +   ++  G     I  E  
Sbjct: 13  DTGEELGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVS 65

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L+ ++HP +  L  V      V   ++   G +L        ++  +++    +  +++
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELF--DFLAEKESLTEEEATEFLKQIL 123

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             + YLH++ I + DLKPENIM+ +                                   
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRN--------------------------------- 150

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
           + K R  +  F  +                       D   +  +  GT E+VAPEI+  
Sbjct: 151 VPKPRIKIIDFGLA--------------------HKIDFGNEFKNIFGTPEFVAPEIVNY 190

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNL 313
           +      D WS+GV+ + +L GA+PF G +++ET   +     +   E         ++ 
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 250

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLL--KISRPP 352
           IRRLL KDP KR+ +++   H + K  + +  L    S P 
Sbjct: 251 IRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 291

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  179 bits (454), Expect = 2e-53
 Identities = 93/354 (26%), Positives = 165/354 (46%), Gaps = 78/354 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +I+  LG G+ G V L++   +   +A+KV+ ++++ +            +    + E+ 
Sbjct: 7   QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL----------KQVEHTNDERL 56

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L  V HP + R+ G     + +   +DY  G +L SL ++   Q F +   +FYAAE+ 
Sbjct: 57  MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVC 114

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
           LALEYLH+  I+YRDLKPENI         L+D +   K++                   
Sbjct: 115 LALEYLHSKDIIYRDLKPENI---------LLDKNGHIKIT------------------- 146

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                              D   +  +             + + +  GT +Y+APE++  
Sbjct: 147 -------------------DFGFAKYV------------PDVTYTLCGTPDYIAPEVVST 175

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-PTPLRNLIRRL 317
           K ++ ++DWWS G++++EML G TPF  S+  +T+ +IL             +++L+ RL
Sbjct: 176 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRL 235

Query: 318 LEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIPARFEHENNES 365
           + +D ++R+G      E++K H +FK V WE LL +    P  P   + + + S
Sbjct: 236 ITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTS 289

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  179 bits (456), Expect = 2e-53
 Identities = 70/353 (19%), Positives = 124/353 (35%), Gaps = 74/353 (20%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            I+  LG GA GVV    +  +   F  K I       K               +  E  
Sbjct: 32  DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK-------------YTVKNEIS 78

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           ++  + HP L  L         +   +++  G +L      +  +  S+  +  Y  +  
Sbjct: 79  IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQAC 137

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             L+++H   IV+ D+KPENIM +                                    
Sbjct: 138 EGLKHMHEHSIVHLDIKPENIMCETKKA-------------------------------- 165

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                        S + + D   + ++ PD          E       T E+ APEI++ 
Sbjct: 166 -------------SSVKIIDFGLATKLNPD----------EIVKVTTATAEFAAPEIVDR 202

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-----LRNL 313
           +   F  D W++GV+ + +L G +PF G    ET   +     +   +         ++ 
Sbjct: 203 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF 262

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
           I+ LL+K+P KR+ V +   H + KG +  L  +I        R + +   +D
Sbjct: 263 IKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYAD 315

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  179 bits (456), Expect = 2e-53
 Identities = 74/362 (20%), Positives = 123/362 (33%), Gaps = 79/362 (21%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            I   LG GA GVV  V +  +  +FA K +                +      +  E +
Sbjct: 29  DIHEELGTGAFGVVHRVTERATGNNFAAKFV-------------MTPHESDKETVRKEIQ 75

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
            +  + HP L  L      D  +    ++  G +L      +  +  S+D    Y  ++ 
Sbjct: 76  TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVC 134

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             L ++H    V+ DLKPENI         +     S +L                    
Sbjct: 135 KGLCHMHENNYVHLDLKPENI---------MFTTKRSNEL-------------------- 165

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                    K    G++                 +  D  +      GT E+ APE+ EG
Sbjct: 166 ---------KLIDFGLT-----------------AHLDPKQSVKVTTGTAEFAAPEVAEG 199

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-----LRNL 313
           K   +  D WS+GV+ + +L G +PF G +  ET   +     ++            ++ 
Sbjct: 200 KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 259

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGT 373
           IR+LL  DP  R+ + +   H +    N        R   IP+    +  +S     D  
Sbjct: 260 IRKLLLADPNTRMTIHQALEHPWLTPGNAP-----GRDSQIPSSRYTKIRDSIKTKYDAW 314

Query: 374 KE 375
            E
Sbjct: 315 PE 316

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (449), Expect = 4e-53
 Identities = 67/330 (20%), Positives = 128/330 (38%), Gaps = 79/330 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            I+  LG GA G V+  ++ E+S   A KVI             +  + ++      E  
Sbjct: 15  EIIGELGDGAFGKVYKAQNKETSVLAAAKVI-------------DTKSEEELEDYMVEID 61

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L + +HP + +L      +  +   I++C G  + ++  +  E+  ++  I+    + +
Sbjct: 62  ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTL 120

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            AL YLH+  I++RDLK  NI         L   D   KL                    
Sbjct: 121 DALNYLHDNKIIHRDLKAGNI---------LFTLDGDIKL-------------------- 151

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII-- 256
                         G+S                  ++ + ++ +SF+GT  ++APE++  
Sbjct: 152 -----------ADFGVS----------------AKNTRTIQRRDSFIGTPYWMAPEVVMC 184

Query: 257 ---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TP 309
              + + +D+  D WSLG+ L EM     P    +      +I    P  + +P    + 
Sbjct: 185 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 244

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
            ++ +++ LEK+   R    ++  H F   
Sbjct: 245 FKDFLKKCLEKNVDARWTTSQLLQHPFVTV 274

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  174 bits (442), Expect = 3e-52
 Identities = 79/332 (23%), Positives = 118/332 (35%), Gaps = 75/332 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
                LGRG   VV       + + +A+K+I        S E    +  +       E  
Sbjct: 6   EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE----EVQELREATLKEVD 61

Query: 79  VLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           +LR V  HP + +L+    T+ F     D     +L     ++     S+   R     L
Sbjct: 62  ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRAL 119

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
           +  +  LH + IV+RDLKPENI         L+D D++ KL+                  
Sbjct: 120 LEVICALHKLNIVHRDLKPENI---------LLDDDMNIKLT------------------ 152

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
                                         D       D  EK     GT  Y+APEIIE
Sbjct: 153 ------------------------------DFGFSCQLDPGEKLREVCGTPSYLAPEIIE 182

Query: 258 G------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGE 306
                   G+   VD WS GV+++ +L G+ PF    +      I+        P+    
Sbjct: 183 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 242

Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              +++L+ R L   P KR   EE   H FF+
Sbjct: 243 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  172 bits (437), Expect = 3e-51
 Identities = 74/329 (22%), Positives = 124/329 (37%), Gaps = 73/329 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
                LG GA   V L +D  + +  A+K I +  +E K   + N            E  
Sbjct: 12  DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN------------EIA 59

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           VL  ++HP +  L  +  +   +   +    G +L     ++    +++        +++
Sbjct: 60  VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVL 117

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            A++YLH++GIV+RDLKPEN++         +D D    +S                   
Sbjct: 118 DAVKYLHDLGIVHRDLKPENLL------YYSLDEDSKIMIS------------------- 152

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                                        D       D     ++  GT  YVAPE++  
Sbjct: 153 -----------------------------DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 183

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNL 313
           K +  AVD WS+GV+ + +L G  PF   +  + F +IL    +             ++ 
Sbjct: 184 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 243

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKGVNW 342
           IR L+EKDP KR   E+   H +  G   
Sbjct: 244 IRHLMEKDPEKRFTCEQALQHPWIAGDTA 272

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (425), Expect = 9e-50
 Identities = 64/325 (19%), Positives = 114/325 (35%), Gaps = 73/325 (22%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +V  LG GA G V L  +  + E+ A+K++         + +              E  
Sbjct: 8   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK------------EIC 55

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           + + + H  + +  G           ++YC G +L    +        +   + +  +L+
Sbjct: 56  INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLM 113

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             + YLH +GI +RD+KPEN+         L+D   + K+S                   
Sbjct: 114 AGVVYLHGIGITHRDIKPENL---------LLDERDNLKIS------------------- 145

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                  L+                            +     N   GT  YVAPE+++ 
Sbjct: 146 ----DFGLATVFRYN----------------------NRERLLNKMCGTLPYVAPELLKR 179

Query: 259 KG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC----RPPDLVGEPTPLRNL 313
           +  H   VD WS G+VL  ML G  P+   S     Y                 +    L
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 239

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFK 338
           + ++L ++P+ RI + +IK   ++ 
Sbjct: 240 LHKILVENPSARITIPDIKKDRWYN 264

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  168 bits (426), Expect = 6e-49
 Identities = 89/353 (25%), Positives = 149/353 (42%), Gaps = 81/353 (22%)

Query: 14  DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
           DFS  RI   +GRG  G V+  +  ++ + +A+K + +  I+ K  E             
Sbjct: 5   DFSVHRI---IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-------TLALNE 54

Query: 74  SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
                ++   + P +  +     T   + + +D   G DLH    Q    +FS+  +RFY
Sbjct: 55  RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFY 112

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
           AAE++L LE++HN  +VYRDLKP         +I+L                        
Sbjct: 113 AAEIILGLEHMHNRFVVYRDLKPA--------NILL------------------------ 140

Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP 253
               G  +                               +   S +K ++ VGT  Y+AP
Sbjct: 141 -DEHGHVRISDL-------------------------GLACDFSKKKPHASVGTHGYMAP 174

Query: 254 EIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT---- 308
           E+++ G  +D + DW+SLG +L ++L G +PFR    K+            V  P     
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 234

Query: 309 PLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
            LR+L+  LL++D  +R+     G +E+K   FF+ ++W+ + L+   PP IP
Sbjct: 235 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 287

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  164 bits (415), Expect = 2e-48
 Identities = 65/324 (20%), Positives = 110/324 (33%), Gaps = 75/324 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +   LG G    V L +D+      A+KV+  DL                Y R   E +
Sbjct: 10  ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP----------SFYLRFRREAQ 59

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAI----DYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
               + HP +  +      +   G       +Y  G  L  +   +     +        
Sbjct: 60  NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVI 117

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
           A+   AL + H  GI++RD+KP NIMI     + ++DF ++  ++               
Sbjct: 118 ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD-------------- 163

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                                                    +S  ++ + +GT +Y++PE
Sbjct: 164 ---------------------------------------SGNSVTQTAAVIGTAQYLSPE 184

Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTP 309
              G   D   D +SLG VL+E+L G  PF G S     Y+ +   P             
Sbjct: 185 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD 244

Query: 310 LRNLIRRLLEKDPTKRIG-VEEIK 332
           L  ++ + L K+P  R     E++
Sbjct: 245 LDAVVLKALAKNPENRYQTAAEMR 268

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 1e-47
 Identities = 59/361 (16%), Positives = 113/361 (31%), Gaps = 79/361 (21%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            I   LGRG  G+V    +  S +++  K +                 G     +  E  
Sbjct: 8   MIAEDLGRGEFGIVHRCVETSSKKTYMAKFV--------------KVKGTDQVLVKKEIS 53

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L    H  +  L     + + +    ++  G D+       + +  ++  I  Y  ++ 
Sbjct: 54  ILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVC 112

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
            AL++LH+  I + D++PENI         +     S+ +                    
Sbjct: 113 EALQFLHSHNIGHFDIRPENI---------IYQTRRSSTI-------------------- 143

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                    K    G +                       +         EY APE+ + 
Sbjct: 144 ---------KIIEFGQA-----------------RQLKPGDNFRLLFTAPEYYAPEVHQH 177

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-----LRNL 313
                A D WSLG +++ +L G  PF   + ++    I+        E          + 
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKG----VNWELLLKISRPPNIPARFEHENNESDGRG 369
           + RLL K+   R+   E   H + K     V+ +++  +          + + N      
Sbjct: 238 VDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLIKKDLNMVVSAA 297

Query: 370 R 370
           R
Sbjct: 298 R 298

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (409), Expect = 7e-47
 Identities = 72/371 (19%), Positives = 121/371 (32%), Gaps = 118/371 (31%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +S LG G  GVVF V    S    A K+I  ++      ++              E +
Sbjct: 9   EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR------------ELQ 56

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           VL     P +    G   +D  +   +++  G  L  + K+       +  +   +  ++
Sbjct: 57  VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVI 114

Query: 139 LALEYLHNM-GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
             L YL     I++RD+KP N         +LV+     KL                   
Sbjct: 115 KGLTYLREKHKIMHRDVKPSN---------ILVNSRGEIKL------------------- 146

Query: 198 GIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIE 257
                       C  G+S +                       +NSFVGT  Y++PE ++
Sbjct: 147 ------------CDFGVSGQLI------------------DSMANSFVGTRSYMSPERLQ 176

Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
           G  +    D WS+G+ L EM  G  P      KE                          
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236

Query: 292 -TFYRILCRPPDLVGE------------------PTPLRNLIRRLLEKDPTKRIGVEEIK 332
            + Y +  RPP  + E                      ++ + + L K+P +R  ++++ 
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296

Query: 333 GHEFFKGVNWE 343
            H F K  + E
Sbjct: 297 VHAFIKRSDAE 307

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (409), Expect = 8e-47
 Identities = 71/366 (19%), Positives = 130/366 (35%), Gaps = 92/366 (25%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G  G V  + +  + E FALK++               D     R +    R  +  
Sbjct: 20  LGLGINGKVLQIFNKRTQEKFALKML--------------QDCPKARREVELHWRASQ-- 63

Query: 84  EHPLLPRLRGVL----STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
             P + R+  V     +  K +   ++   G +L S  + + +Q F++         +  
Sbjct: 64  -CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 122

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
           A++YLH++ I +RD+KPEN++        ++                             
Sbjct: 123 AIQYLHSINIAHRDVKPENLLYTSKRPNAIL----------------------------- 153

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                   K    G +                  ++ S     +   T  YVAPE++  +
Sbjct: 154 --------KLTDFGFA-----------------KETTSHNSLTTPCYTPYYVAPEVLGPE 188

Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---------PPDLVGEPTPL 310
            +D + D WSLGV+++ +L G  PF  +        +  R          P+       +
Sbjct: 189 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 248

Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGR 370
           + LIR LL+ +PT+R+ + E   H +          + ++ P  P        E   R  
Sbjct: 249 KMLIRNLLKTEPTQRMTITEFMNHPWIM--------QSTKVPQTPLHTSRVLKEDKERWE 300

Query: 371 DGTKEI 376
           D  +E+
Sbjct: 301 DVKEEM 306

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (404), Expect = 9e-47
 Identities = 57/338 (16%), Positives = 121/338 (35%), Gaps = 81/338 (23%)

Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
            S D   L+    +GRG+   V+   D E++   A   +    + K  ++          
Sbjct: 4   MSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---------- 53

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFS 126
            R   E  +L+ ++HP + R      +     K +    +      L +  K+   ++  
Sbjct: 54  -RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMK 110

Query: 127 DDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
              +R +  +++  L++LH     I++RDLK +N        I +     S K+      
Sbjct: 111 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN--------IFITGPTGSVKI------ 156

Query: 185 ASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSF 244
                                      + +                       +  + + 
Sbjct: 157 ----------------------GDLGLATL---------------------KRASFAKAV 173

Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP 301
           +GT E++APE+ E K +D +VD ++ G+ + EM     P+         YR +    +P 
Sbjct: 174 IGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA 232

Query: 302 DLVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                  P ++ +I   + ++  +R  ++++  H FF+
Sbjct: 233 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (399), Expect = 5e-46
 Identities = 64/329 (19%), Positives = 120/329 (36%), Gaps = 78/329 (23%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            ++  +G G+ G    ++     +    K +    + +  K++  +           E  
Sbjct: 7   EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-----------EVN 55

Query: 79  VLRNVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIRFYA 134
           +LR ++HP + R    +   T+  +   ++YC G DL S+  +  +  Q   ++ +    
Sbjct: 56  LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 115

Query: 135 AELVLALEYLHNMG-----IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
            +L LAL+  H        +++RDLKP N+          +D   + KL           
Sbjct: 116 TQLTLALKECHRRSDGGHTVLHRDLKPANV---------FLDGKQNVKL----------- 155

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                                  G++                R  +  +  + +FVGT  
Sbjct: 156 --------------------GDFGLA----------------RILNHDTSFAKAFVGTPY 179

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE--P 307
           Y++PE +    ++   D WSLG +L+E+     PF   S+KE   +I       +     
Sbjct: 180 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 239

Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
             L  +I R+L      R  VEEI  +  
Sbjct: 240 DELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 7e-45
 Identities = 58/340 (17%), Positives = 114/340 (33%), Gaps = 76/340 (22%)

Query: 13  LDFSCLRIVS-ALGRGAKGVVFLV--KDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
           LD   L +    LG G  G V     +  +  ++ A+K++  +  +   K+         
Sbjct: 3   LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--------- 53

Query: 70  YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
              +  E  V++ +++P + R+ G+   + ++   ++      L+   +Q   +   D  
Sbjct: 54  --ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQN--RHVKDKN 108

Query: 130 IRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
           I     ++ + ++YL     V+RDL   N+++    +  + DF LS  L           
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR---------- 158

Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE 249
                                                      +D +  +         +
Sbjct: 159 -------------------------------------------ADENYYKAQTHGKWPVK 175

Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILC--RPPDLVGE 306
           + APE I         D WS GV++ E   YG  P+RG    E    +    R     G 
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 235

Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKG---HEFFKGVNWE 343
           P  + +L+      D   R G   ++    + ++  VN  
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 275

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  155 bits (392), Expect = 1e-44
 Identities = 64/324 (19%), Positives = 109/324 (33%), Gaps = 64/324 (19%)

Query: 11  RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
           + +D SC++I   +G G  G V         +      I         K L +     + 
Sbjct: 21  KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAI---------KTLKSGYTEKQR 71

Query: 71  RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
           R    E  ++   +HP +  L GV++    V    ++     L S  +Q   Q  +   +
Sbjct: 72  RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-TVIQL 130

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
                 +   ++YL +M  V+RDL   NI++  N    + DF LS  L   T   +  + 
Sbjct: 131 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 190

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
           L                                                          +
Sbjct: 191 L---------------------------------------------------GGKIPIRW 199

Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEP 307
            APE I+ +    A D WS G+V+ E++ YG  P+   + ++    I    R P  +  P
Sbjct: 200 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP 259

Query: 308 TPLRNLIRRLLEKDPTKRIGVEEI 331
           + L  L+    +KD   R    +I
Sbjct: 260 SALHQLMLDCWQKDRNHRPKFGQI 283

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (378), Expect = 6e-43
 Identities = 60/322 (18%), Positives = 106/322 (32%), Gaps = 72/322 (22%)

Query: 18  LRIVSALGRGAKGVVFLVKDVESS---ESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS 74
           LR++  LG G+ GVV   +    S    S A+K +  D++ +           +      
Sbjct: 10  LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP----------EAMDDFI 59

Query: 75  FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
            E   + +++H  L RL GV+ T        +  P   L    ++     F   T+  YA
Sbjct: 60  REVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH-FLLGTLSRYA 117

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
            ++   + YL +   ++RDL   N+++     + + DF L   L                
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-------------- 163

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                                                  + D             + APE
Sbjct: 164 ---------------------------------------NDDHYVMQEHRKVPFAWCAPE 184

Query: 255 IIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILC---RPPDLVGEPTPL 310
            ++ +    A D W  GV L EM  YG  P+ G +  +  ++I     R P     P  +
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 244

Query: 311 RNLIRRLLEKDPTKRIGVEEIK 332
            N++ +     P  R     ++
Sbjct: 245 YNVMVQCWAHKPEDRPTFVALR 266

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 7e-43
 Identities = 53/313 (16%), Positives = 96/313 (30%), Gaps = 72/313 (23%)

Query: 24  LGRGAKGVVFLVKDVESSES--FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR 81
           LG G  G V         +    A+KV+ +   +  ++E+              E +++ 
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR------------EAQIMH 64

Query: 82  NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLAL 141
            +++P + RL GV   +  +   ++   G  LH     + E+      +     ++ + +
Sbjct: 65  QLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGM 122

Query: 142 EYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
           +YL     V+RDL   N+++    +  + DF LS  L                       
Sbjct: 123 KYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA--------------------- 161

Query: 202 RRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGH 261
                                           D       ++     ++ APE I  +  
Sbjct: 162 --------------------------------DDSYYTARSAGKWPLKWYAPECINFRKF 189

Query: 262 DFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLIRRLL 318
               D WS GV + E L YG  P++     E    I    R       P  L  L+    
Sbjct: 190 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCW 249

Query: 319 EKDPTKRIGVEEI 331
                 R     +
Sbjct: 250 IYKWEDRPDFLTV 262

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (378), Expect = 8e-43
 Identities = 60/332 (18%), Positives = 112/332 (33%), Gaps = 80/332 (24%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +    + +   +G G+ G V+  K        A+K++       +  +   N        
Sbjct: 5   IPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKN-------- 53

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E  VLR   H  +    G  ST   +     +C G  L+       E  F    +  
Sbjct: 54  ---EVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 108

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
            A +    ++YLH   I++RDLK  NI + E+  +                         
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV------------------------- 143

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                          K    G++                +S    S +     G+  ++A
Sbjct: 144 ---------------KIGDFGLA--------------TVKSRWSGSHQFEQLSGSILWMA 174

Query: 253 PEIIEGKG---HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDLV-- 304
           PE+I  +    + F  D ++ G+VL+E++ G  P+   + ++    ++ R    PDL   
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 234

Query: 305 --GEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
               P  ++ L+   L+K   +R    +I   
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (373), Expect = 2e-41
 Identities = 73/383 (19%), Positives = 129/383 (33%), Gaps = 108/383 (28%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +S +G GA G+V    D  +    A+K I     +   +                E +
Sbjct: 11  TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR------------EIK 58

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           +L    H  +  +  ++           Y + +  G DL+ L K Q     S+D I ++ 
Sbjct: 59  ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFL 115

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
            +++  L+Y+H+  +++RDLKP N+++     + + DF L+    P              
Sbjct: 116 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP-------------- 161

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                                                  D D +     +V T  Y APE
Sbjct: 162 ---------------------------------------DHDHTGFLTEYVATRWYRAPE 182

Query: 255 II-EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP---- 309
           I+   KG+  ++D WS+G +L EML     F G    +    IL        E       
Sbjct: 183 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 242

Query: 310 ----------------------------LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                                         +L+ ++L  +P KRI VE+   H + +   
Sbjct: 243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 302

Query: 342 WELLLKISRPPNIPARFEHENNE 364
                 I+  P    +F+ E ++
Sbjct: 303 DPSDEPIAEAPF---KFDMELDD 322

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 3e-41
 Identities = 58/379 (15%), Positives = 127/379 (33%), Gaps = 72/379 (18%)

Query: 8   RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG 67
           R ++  +F  +++   LG GA G V+    +   E   + V          KEL    + 
Sbjct: 4   RILKETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAI--------KELREATSP 52

Query: 68  DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
              + I  E  V+ +V++P + RL G+  T           P   L     ++ +     
Sbjct: 53  KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD-YVREHKDNIGS 110

Query: 128 DTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
             +  +  ++   + YL +  +V+RDL   N++++   H+ + DF               
Sbjct: 111 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-------------- 156

Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT 247
                             L+K   +                       +    +      
Sbjct: 157 ------------------LAKLLGA----------------------EEKEYHAEGGKVP 176

Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLV 304
            +++A E I  + +    D WS GV + E++ +G+ P+ G    E    +    R P   
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 236

Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE--LLLKISRPPNIPARFEHEN 362
                +  ++ +    D   R    E+         + +  L+++     ++P+  +   
Sbjct: 237 ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 296

Query: 363 NESDGRGRDGTKEIDVEKF 381
             +     D    +D +++
Sbjct: 297 YRALMDEEDMDDVVDADEY 315

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 1e-40
 Identities = 48/348 (13%), Positives = 102/348 (29%), Gaps = 87/348 (25%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
                L     LG GA G V        S++     +         K L    +  +   
Sbjct: 34  FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQV-------AVKMLKEKADSSEREA 86

Query: 73  ISFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM------- 124
           +  E +++  +  H  +  L G  +    +    +YC   DL +  + + E+        
Sbjct: 87  LMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEY 146

Query: 125 --------------FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV 170
                          + + +  +A ++   +E+L     V+RDL   N+++     + + 
Sbjct: 147 ENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC 206

Query: 171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPP 230
           DF                                 L++   S                  
Sbjct: 207 DFG--------------------------------LARDIMSD----------------- 217

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSR 289
                 +     +     +++APE +    +    D WS G++L E+   G  P+ G   
Sbjct: 218 -----SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 272

Query: 290 KETFYRILC---RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
              FY+++    +          +  +++     D  KR     +   
Sbjct: 273 DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 2e-40
 Identities = 61/362 (16%), Positives = 115/362 (31%), Gaps = 107/362 (29%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             ++ +G+G  G VF  +  ++ +  ALK +  +           N+          E +
Sbjct: 13  EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-----------NEKEGFPITALREIK 61

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAI--------DYCPGRDLHSLRKQQSEQMFSDDTI 130
           +L+ ++H  +  L  +  T                D+C       L        F+   I
Sbjct: 62  ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--VKFTLSEI 119

Query: 131 RFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
           +     L+  L Y+H   I++RD+K  N++I  +G + L DF L+   S           
Sbjct: 120 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL---------- 169

Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY 250
                                                     + +    +  + V T  Y
Sbjct: 170 ------------------------------------------AKNSQPNRYTNRVVTLWY 187

Query: 251 VAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP 309
             PE++ G + +   +D W  G ++ EM   +   +G++ +     I      +  E  P
Sbjct: 188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 247

Query: 310 ---------------------------------LRNLIRRLLEKDPTKRIGVEEIKGHEF 336
                                              +LI +LL  DP +RI  ++   H+F
Sbjct: 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307

Query: 337 FK 338
           F 
Sbjct: 308 FW 309

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 6e-40
 Identities = 80/396 (20%), Positives = 135/396 (34%), Gaps = 116/396 (29%)

Query: 7   DRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDN 66
           DRP   + ++  ++   +G G+ GVV+  K  +S E  A+K +       + K   N   
Sbjct: 15  DRPQE-VSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNR-- 62

Query: 67  GDKYRRISFEQRVLRNVEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-Q 119
                    E +++R ++H  + RLR    +      + ++   +DY P       R   
Sbjct: 63  ---------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113

Query: 120 QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
           +++Q      ++ Y  +L  +L Y+H+ GI +RD+KP+        +++L       KL 
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQ--------NLLLDPDTAVLKLC 165

Query: 180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE 239
                                                           D  S       E
Sbjct: 166 ------------------------------------------------DFGSAKQLVRGE 177

Query: 240 KSNSFVGTEEYVAP-EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL- 297
            + S++ +  Y AP  I     +  ++D WS G VL E+L G   F G S  +    I+ 
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

Query: 298 -------------------CRPPDLVGEPTP----------LRNLIRRLLEKDPTKRIGV 328
                               + P +   P               L  RLLE  PT R+  
Sbjct: 238 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 297

Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNE 364
            E   H FF  +     +K+    + PA F     E
Sbjct: 298 LEACAHSFFDELRDP-NVKLPNGRDTPALFNFTTQE 332

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 1e-39
 Identities = 56/331 (16%), Positives = 110/331 (33%), Gaps = 76/331 (22%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +    LR+   LG+G  G V++     ++   A+K +    +  +               
Sbjct: 14  IPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPE--------------A 58

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E +V++ + H  L +L  V+S +  +    +Y     L    K ++ +      +  
Sbjct: 59  FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 117

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
            AA++   + Y+  M  V+RDL+  NI++ EN                            
Sbjct: 118 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVC------------------------- 152

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                          K    G++                  + +            ++ A
Sbjct: 153 ---------------KVADFGLA---------------RLIEDNEYTARQGAKFPIKWTA 182

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTP 309
           PE           D WS G++L E+   G  P+ G   +E   ++    R P     P  
Sbjct: 183 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 242

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKG--HEFFK 338
           L +L+ +   K+P +R   E ++    ++F 
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 1e-39
 Identities = 53/325 (16%), Positives = 101/325 (31%), Gaps = 74/325 (22%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +D   L  +  LG G  GVV   K        A+K+I    + +                
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSED--------------E 45

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E +V+ N+ H  L +L GV +  + +    +Y     L +  ++   + F    +  
Sbjct: 46  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLE 104

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
              ++  A+EYL +   ++RDL   N ++ + G +                         
Sbjct: 105 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK------------------------ 140

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                        +S F  S   L+D   S                  S        +  
Sbjct: 141 -------------VSDFGLSRYVLDDEYTS------------------SVGSKFPVRWSP 169

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTP 309
           PE++         D W+ GV++ E+   G  P+   +  ET   I    R          
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 229

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGH 334
           +  ++     +   +R   + +  +
Sbjct: 230 VYTIMYSCWHEKADERPTFKILLSN 254

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 1e-39
 Identities = 75/354 (21%), Positives = 121/354 (34%), Gaps = 99/354 (27%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           + V  +G G  GVV+  ++  + E  ALK I  D   +                   E  
Sbjct: 5   QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-----------EIS 53

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L+ + HP + +L  V+ T+  + Y +     +DL       +        I+ Y  +L+
Sbjct: 54  LLKELNHPNIVKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 112

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             L + H+  +++RDLKP+N         +L++ +                         
Sbjct: 113 QGLAFCHSHRVLHRDLKPQN---------LLINTE------------------------- 138

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                    K    G++                R+           V T  Y APEI+ G
Sbjct: 139 ------GAIKLADFGLA----------------RAFGVPVRTYTHEVVTLWYRAPEILLG 176

Query: 259 KGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEPTP------ 309
             +   AVD WSLG +  EM+     F G S  +  +RI      PD V  P        
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236

Query: 310 ----------------------LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
                                  R+L+ ++L  DP KRI  +    H FF+ V 
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 2e-39
 Identities = 56/326 (17%), Positives = 108/326 (33%), Gaps = 80/326 (24%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           L+   L+++  +G+G  G V L          A+K I                N    + 
Sbjct: 4   LNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCI---------------KNDATAQA 46

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSDDTIR 131
              E  V+  + H  L +L GV+  +K   Y + +Y     L    + +   +   D + 
Sbjct: 47  FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 106

Query: 132 FYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
            ++ ++  A+EYL     V+RDL   N+         LV  D                  
Sbjct: 107 KFSLDVCEAMEYLEGNNFVHRDLAARNV---------LVSED------------------ 139

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                         ++K    G++                    ++S   ++     ++ 
Sbjct: 140 -------------NVAKVSDFGLT-------------------KEASSTQDTGKLPVKWT 167

Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPT 308
           APE +  K      D WS G++L E+  +G  P+     K+   R+    +     G P 
Sbjct: 168 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP 227

Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKGH 334
            +  +++     D   R    +++  
Sbjct: 228 AVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  141 bits (355), Expect = 2e-39
 Identities = 51/349 (14%), Positives = 107/349 (30%), Gaps = 87/349 (24%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R+   +G G+ G ++L  D+ + E  A+K+                    K+ ++  E +
Sbjct: 10  RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE---------------CVKTKHPQLHIESK 54

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           + + ++  +          +      +    G  L  L    S + FS  T+   A +++
Sbjct: 55  IYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMI 113

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLV---DFDLSTKLSPKTPQASPKTVLAANT 195
             +EY+H+   ++RD+KP+N ++       LV   DF L+ K                  
Sbjct: 114 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY----------------- 156

Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI 255
                                                       ++ +  GT  Y +   
Sbjct: 157 --------------------------------RDARTHQHIPYRENKNLTGTARYASINT 184

Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-------LCRPPDLVGE-- 306
             G       D  SLG VL     G+ P++G        +        +  P +++ +  
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY 244

Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIK----------GHEFFKGVNWELL 345
           P+     +          +     ++          G  +    +W +L
Sbjct: 245 PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 293

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  137 bits (346), Expect = 4e-38
 Identities = 51/368 (13%), Positives = 101/368 (27%), Gaps = 100/368 (27%)

Query: 3   DVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELT 62
           +VV             ++   +G G+ GV+F   ++ +++  A+K   R     + ++  
Sbjct: 1   NVVGVH---------YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-- 49

Query: 63  NNDNGDKYRRISFEQRVLRNVEH-PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
                        E R  + +     +P +             ID         L     
Sbjct: 50  -------------EYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG- 95

Query: 122 EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-----NGHIMLVDFDLST 176
            + FS  T+   A +++  ++ +H   +VYRD+KP+N +I          I +VDF +  
Sbjct: 96  -RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 154

Query: 177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD 236
                                                                P      
Sbjct: 155 FY-------------------------------------------------RDPVTKQHI 165

Query: 237 SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI 296
              +  +  GT  Y++     G+      D  +LG V    L G+ P++G        + 
Sbjct: 166 PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY 225

Query: 297 L--------CRPPDLVGE-PTPLRNLIRRLLEKDPTKRIGVEEIK----------GHEFF 337
                        +L    P      +              + ++               
Sbjct: 226 ERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTED 285

Query: 338 KGVNWELL 345
           +  +W LL
Sbjct: 286 ENFDWNLL 293

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 1e-37
 Identities = 58/326 (17%), Positives = 107/326 (32%), Gaps = 73/326 (22%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSES----FALKVIWRDLIEKKSKELTNNDNGD 68
           +  SC+     +G G  G V+      SS       A+K +     EK+  +        
Sbjct: 4   IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG----- 58

Query: 69  KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
                  E  ++    H  + RL GV+S  K +    +Y     L    +++ +  FS  
Sbjct: 59  -------EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK-DGEFSVL 110

Query: 129 TIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
            +      +   ++YL NM  V+RDL   NI++  N    + DF LS  L          
Sbjct: 111 QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE--------- 161

Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE 248
                                                        D +++  ++      
Sbjct: 162 --------------------------------------------DDPEATYTTSGGKIPI 177

Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPDLVG 305
            + APE I  +    A D WS G+V+ E++                + +    R P  + 
Sbjct: 178 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMD 237

Query: 306 EPTPLRNLIRRLLEKDPTKRIGVEEI 331
            P+ +  L+ +  +++  +R    +I
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADI 263

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 2e-37
 Identities = 64/325 (19%), Positives = 116/325 (35%), Gaps = 69/325 (21%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +    + +   +G G  G V     +          I      K  K  T++   +K+ +
Sbjct: 4   IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVREKFLQ 57

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E   +R  +HP + +L GV+ T+  V   ++ C   +L S  + + +      ++  
Sbjct: 58  ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 112

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
           YA +L  AL YL +   V+RD+   N+++  N  +                         
Sbjct: 113 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV------------------------- 147

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                          K    G+S                  +  +  K++      +++A
Sbjct: 148 ---------------KLGDFGLS---------------RYMEDSTYYKASKGKLPIKWMA 177

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILC--RPPDLVGEPTP 309
           PE I  +    A D W  GV + E+L +G  PF+G    +   RI    R P     P  
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT 237

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGH 334
           L +L+ +    DP++R    E+K  
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 4e-37
 Identities = 56/330 (16%), Positives = 107/330 (32%), Gaps = 76/330 (23%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +    L++V  LG G  G V++          A+K + +  +                  
Sbjct: 10  VPRETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSPD--------------A 54

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E  +++ ++H  L RL  V++ +       +Y     L    K  S    + + +  
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLD 113

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
            AA++   + ++     ++RDL+  NI         LV   LS K++             
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANI---------LVSDTLSCKIA------------- 151

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                                    D   +  I        + +            ++ A
Sbjct: 152 -------------------------DFGLARLI--------EDNEYTAREGAKFPIKWTA 178

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTP 309
           PE I         D WS G++L E++ +G  P+ G +  E    +    R       P  
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE 238

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKG--HEFF 337
           L  L+R   ++ P  R   + ++    +FF
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 4e-37
 Identities = 73/357 (20%), Positives = 118/357 (33%), Gaps = 98/357 (27%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESF-ALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
             V+ +G GA G VF  +D+++   F ALK +     E+               R     
Sbjct: 10  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPL--------STIREVAVL 61

Query: 78  RVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
           R L   EHP + RL  V +  +         +     +DL +   +  E     +TI+  
Sbjct: 62  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 121

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
             +L+  L++LH+  +V+RDLKP      +N  I++                        
Sbjct: 122 MFQLLRGLDFLHSHRVVHRDLKP------QN--ILV------------------------ 149

Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP 253
            +   IK     L++                                  S V T  Y AP
Sbjct: 150 TSSGQIKLADFGLARIY-------------------------SFQMALTSVVVTLWYRAP 184

Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP---- 309
           E++    +   VD WS+G +  EM      FRGSS  +   +IL        E  P    
Sbjct: 185 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244

Query: 310 ------------------------LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW 342
                                    ++L+ + L  +P KRI       H +F+ +  
Sbjct: 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 301

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  132 bits (332), Expect = 4e-36
 Identities = 59/334 (17%), Positives = 111/334 (33%), Gaps = 74/334 (22%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           ++ + + +   LG G  G V+     + S + A+K +  D +E +               
Sbjct: 14  MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE--------------E 59

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E  V++ ++HP L +L GV + +       ++    +L    ++ + Q  S   + +
Sbjct: 60  FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 119

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
            A ++  A+EYL     ++RDL   N          LV  +   K++             
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNC---------LVGENHLVKVA------------- 157

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                                    D   S  +          D+           ++ A
Sbjct: 158 -------------------------DFGLSRLM--------TGDTYTAHAGAKFPIKWTA 184

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPDLVGEPTP 309
           PE +         D W+ GV+L E+                Y +L    R     G P  
Sbjct: 185 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK 244

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
           +  L+R   + +P+ R    EI  H+ F+ +  E
Sbjct: 245 VYELMRACWQWNPSDRPSFAEI--HQAFETMFQE 276

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 4e-36
 Identities = 56/337 (16%), Positives = 109/337 (32%), Gaps = 85/337 (25%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           LD++ ++    +G G  G V   +  +        +          K +    + D +R 
Sbjct: 7   LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAI----------KRMKEYASKDDHRD 56

Query: 73  ISFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQ------------ 119
            + E  VL  +  HP +  L G      ++  AI+Y P  +L    ++            
Sbjct: 57  FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 116

Query: 120 --QSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK 177
              +    S   +  +AA++   ++YL     ++RDL   NI         LV  +   K
Sbjct: 117 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI---------LVGENYVAK 167

Query: 178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDS 237
           ++                                                D       + 
Sbjct: 168 IA------------------------------------------------DFGLSRGQEV 179

Query: 238 SEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI 296
             K         ++A E +    +    D WS GV+L E++  G TP+ G +  E + ++
Sbjct: 180 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 239

Query: 297 L--CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
               R    +     + +L+R+   + P +R    +I
Sbjct: 240 PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 276

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  131 bits (331), Expect = 5e-36
 Identities = 64/350 (18%), Positives = 113/350 (32%), Gaps = 99/350 (28%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  +G G  GVV+  ++    E+FALK I  +  ++     T             E  
Sbjct: 5   HGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIR-----------EIS 52

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L+ ++H  + +L  V+ T K +    ++        L     E      T + +  +L+
Sbjct: 53  ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLL 110

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             + Y H+  +++RDLKP+N++I   G + + DF L+                       
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR---------------------- 148

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                     F          + +               S                    
Sbjct: 149 ---------AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI----------------- 182

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-------------------CR 299
                  D WS+G +  EM+ G   F G S  +   RI                      
Sbjct: 183 -------DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235

Query: 300 PPDLVGEPTPL-----------RNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
           P   V EP P             +L+ ++L+ DP +RI  ++   H +FK
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 8e-36
 Identities = 53/325 (16%), Positives = 96/325 (29%), Gaps = 74/325 (22%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +D S L  V  +G G  G+V L     + +  A+K I    + ++               
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEE--------------D 46

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
              E  V+  + HP L +L GV      +    ++     L    + Q   +F+ +T+  
Sbjct: 47  FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLG 105

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
              ++   + YL    +++RDL   N          LV  +   K+S             
Sbjct: 106 MCLDVCEGMAYLEEACVIHRDLAARNC---------LVGENQVIKVS------------- 143

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                                                      D    S       ++ +
Sbjct: 144 ---------------------------------DFGMTRFVLDDQYTSSTGTKFPVKWAS 170

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTP 309
           PE+     +    D WS GV++ E+   G  P+   S  E    I    R        T 
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 230

Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGH 334
           +  ++    ++ P  R     +   
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 2e-35
 Identities = 51/318 (16%), Positives = 102/318 (32%), Gaps = 72/318 (22%)

Query: 24  LGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
           +GRG  G V+    +++       A+K + R     +  +               E  ++
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT------------EGIIM 82

Query: 81  RNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
           ++  HP +  L G+    +     +  Y    DL +  + ++      D I F   ++  
Sbjct: 83  KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF-GLQVAK 141

Query: 140 ALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
            +++L +   V+RDL   N M+ E   + + DF L+  +                     
Sbjct: 142 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD------------------- 182

Query: 200 KKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK 259
                                             + DS           +++A E ++ +
Sbjct: 183 ---------------------------------KEFDSVHNKTGAKLPVKWMALESLQTQ 209

Query: 260 GHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRNLIRR 316
                 D WS GV+L E++  GA P+   +  +    +L   R       P PL  ++ +
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 269

Query: 317 LLEKDPTKRIGVEEIKGH 334
                   R    E+   
Sbjct: 270 CWHPKAEMRPSFSELVSR 287

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  130 bits (327), Expect = 4e-35
 Identities = 60/329 (18%), Positives = 118/329 (35%), Gaps = 42/329 (12%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++V  LGRG    VF   ++ ++E   +K++                   K ++I  E +
Sbjct: 38  QLVRKLGRGKYSEVFEAINITNNEKVVVKIL----------------KPVKKKKIKREIK 81

Query: 79  VLRNV-EHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAA 135
           +L N+   P +  L  ++     +      ++    D   L +       +D  IRFY  
Sbjct: 82  ILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMY 136

Query: 136 ELVLALEYLHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
           E++ AL+Y H+MGI++RD+KP N+MI  E+  + L+D+ L+    P              
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 196

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
               +   + +         SL   + S     +P      +  +               
Sbjct: 197 GPELLVDYQMYDYS--LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR------------ 242

Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLI 314
           I +  G +   D+     +  +  +     R S ++   +       +         + +
Sbjct: 243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR---WERFVHSENQHLVSPEALDFL 299

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
            +LL  D   R+   E   H +F  V  +
Sbjct: 300 DKLLRYDHQSRLTAREAMEHPYFYTVVKD 328

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 5e-35
 Identities = 64/351 (18%), Positives = 111/351 (31%), Gaps = 99/351 (28%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  +G G  G VF  K+ E+ E  ALK +  D  ++                   E  
Sbjct: 5   EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-----------EIC 53

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L+ ++H  + RL  VL +DK +    ++C                   + ++ +  +L+
Sbjct: 54  LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKY--FDSCNGDLDPEIVKSFLFQLL 111

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
             L + H+  +++RDLKP+N++I  NG + L +F L+          S +          
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE---------- 161

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
                                V +    P          S                    
Sbjct: 162 ---------------------VVTLWYRPPDVLFGAKLYSTS------------------ 182

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRILCRPPDLVGEPTP-------- 309
                 +D WS G +  E+     P F G+   +   RI         E  P        
Sbjct: 183 ------IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236

Query: 310 ----------------------LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
                                  R+L++ LL+ +P +RI  EE   H +F 
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (326), Expect = 1e-34
 Identities = 65/397 (16%), Positives = 135/397 (34%), Gaps = 126/397 (31%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           + +  +G GA+G+V    D     + A+K + R    +   +           R   E  
Sbjct: 20  QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAK-----------RAYRELV 68

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGY------AIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
           +++ V H  +  L  V +  K +         ++         ++ +        + + +
Sbjct: 69  LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-----ERMSY 123

Query: 133 YAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
              +++  +++LH+ GI++RDLKP NI+++ +  + ++DF                    
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG------------------- 164

Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA 252
                        L++   +   +   V +                           Y A
Sbjct: 165 -------------LARTAGTSFMMTPYVVTRY-------------------------YRA 186

Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--------------- 297
           PE+I G G+   VD WS+G ++ EM+     F G    + + +++               
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246

Query: 298 -------CRPPDLVGEPTP---------------------LRNLIRRLLEKDPTKRIGVE 329
                     P   G   P                      R+L+ ++L  DP KRI V+
Sbjct: 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306

Query: 330 EIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
           +   H +     W    ++  PP  P  ++ + +E +
Sbjct: 307 DALQHPYIN--VWYDPAEVEAPP--PQIYDKQLDERE 339

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 1e-33
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 8/131 (6%)

Query: 233 SDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET 292
           S      ++NSFVGT +YV+PE++  K    + D W+LG ++++++ G  PFR  +    
Sbjct: 159 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 218

Query: 293 FYRILCRPPDLVGEPTP-LRNLIRRLLEKDPTKRIGVEE------IKGHEFFKGVNWELL 345
           F +I+    D   +  P  R+L+ +LL  D TKR+G EE      +K H FF+ V WE L
Sbjct: 219 FQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 278

Query: 346 LKISRPPNIPA 356
            + + PP + A
Sbjct: 279 HQQT-PPKLTA 288

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (305), Expect = 3e-32
 Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 12/172 (6%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           +    LG G+   V L +++ +S  +A+K++ +  I K+          +K   ++ E+ 
Sbjct: 11  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERD 60

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           V+  ++HP   +L      D+ + + + Y    +L    ++     F +   RFY AE+V
Sbjct: 61  VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIV 118

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
            ALEYLH  GI++RDLKPENI++ E+ HI + DF  +  LSP++ QA   + 
Sbjct: 119 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 170

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 3e-33
 Identities = 53/346 (15%), Positives = 108/346 (31%), Gaps = 89/346 (25%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKD-----VESSESFALKVIWRDLIEKKSKELTNNDNG 67
                L++   LGRGA G V            +  + A+K++       + + L      
Sbjct: 10  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL------ 63

Query: 68  DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAI-DYCPGRDLHSLRKQQSEQM-- 124
                +S  + ++    H  +  L G  +        I ++C   +L +  + +  +   
Sbjct: 64  -----MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 118

Query: 125 ------------FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF 172
                        + + +  Y+ ++   +E+L +   ++RDL   NI++ E   + + DF
Sbjct: 119 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 178

Query: 173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSR 232
                                            L++                        
Sbjct: 179 G--------------------------------LARDIYK-------------------- 186

Query: 233 SDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYG-ATPFRGSSRKE 291
                  +        +++APE I  + +    D WS GV+L E+    A+P+ G    E
Sbjct: 187 --DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 244

Query: 292 TFYRIL---CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
            F R L    R          +   +      +P++R    E+  H
Sbjct: 245 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  124 bits (311), Expect = 5e-33
 Identities = 61/344 (17%), Positives = 101/344 (29%), Gaps = 96/344 (27%)

Query: 18  LRIVSALGRGAKGVVFLVK-----DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
           +  V  +G GA G VF  +       E     A+K++  +       +            
Sbjct: 15  IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR--------- 65

Query: 73  ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM-------- 124
              E  ++   ++P + +L GV +  K +    +Y    DL+   +  S           
Sbjct: 66  ---EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 122

Query: 125 --------------FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV 170
                          S       A ++   + YL     V+RDL   N          LV
Sbjct: 123 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC---------LV 173

Query: 171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPP 230
             ++  K++                                      D   S  I     
Sbjct: 174 GENMVVKIA--------------------------------------DFGLSRNI----- 190

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSR 289
               +D  +   +      ++ PE I    +    D W+ GVVL E+  YG  P+ G + 
Sbjct: 191 --YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 248

Query: 290 KETFYRIL--CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
           +E  Y +            P  L NL+R    K P  R     I
Sbjct: 249 EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI 292

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (308), Expect = 1e-32
 Identities = 59/344 (17%), Positives = 115/344 (33%), Gaps = 91/344 (26%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDVESSES-------FALKVIWRDLIEKKSKELTNND 65
           L    L +   LG GA G V L + +   +         A+K++  D  EK   +L +  
Sbjct: 10  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLIS-- 67

Query: 66  NGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ---- 120
                     E  +++ + +H  +  L G  + D  +   ++Y    +L    + +    
Sbjct: 68  ----------EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 117

Query: 121 ----------SEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV 170
                      E+  S   +   A ++   +EYL +   ++RDL   N         +LV
Sbjct: 118 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN---------VLV 168

Query: 171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPP 230
             D   K++                             F  +                  
Sbjct: 169 TEDNVMKIAD----------------------------FGLARDI--------------- 185

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSR 289
                D  +K+ +     +++APE +  + +    D WS GV+L E+   G +P+ G   
Sbjct: 186 --HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 243

Query: 290 KETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
           +E F  +    R          L  ++R      P++R   +++
Sbjct: 244 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 287

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 2e-32
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 216 LEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLH 275
           L D     +I      + +     K+N+F GT +Y+APEI+ G+ ++ +VDWWS GV+L+
Sbjct: 135 LLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 194

Query: 276 EMLYGATPFRGSSRKETFYRILCRPPDLVGE-PTPLRNLIRRLLEKDPTKRIGVE-EIKG 333
           EML G +PF G   +E F+ I    P          ++L+ +L  ++P KR+GV  +I+ 
Sbjct: 195 EMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254

Query: 334 HEFFKGVNWELLL-KISRPPNIP 355
           H  F+ +NWE L  K   PP  P
Sbjct: 255 HPLFREINWEELERKEIDPPFRP 277

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 7e-27
 Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 13/167 (7%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +   LG+G+ G VFL +  ++++ FA+K + +D++             D       E+R
Sbjct: 5   ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD----------DDVECTMVEKR 54

Query: 79  VL-RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAEL 137
           VL    EHP L  +     T + + + ++Y  G DL    +      F      FYAAE+
Sbjct: 55  VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEI 112

Query: 138 VLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
           +L L++LH+ GIVYRDLK +NI++ ++GHI + DF +  +      +
Sbjct: 113 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 159

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 4e-31
 Identities = 58/324 (17%), Positives = 103/324 (31%), Gaps = 54/324 (16%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           LG G    V+  +D  +++  A+K I             +       R    E ++L+ +
Sbjct: 6   LGEGQFATVYKARDKNTNQIVAIKKI--------KLGHRSEAKDGINRTALREIKLLQEL 57

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
            HP +  L         +    D+        ++      + +   I+ Y    +  LEY
Sbjct: 58  SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEY 115

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP---------KTPQASPKTVLAAN 194
           LH   I++RDLKP N+++ ENG + L DF L+               T       +L   
Sbjct: 116 LHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA 175

Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
              G+           + G  L +      +   P    DSD  + +             
Sbjct: 176 RMYGVG------VDMWAVGCILAE-----LLLRVPFLPGDSDLDQLTR------------ 212

Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLI 314
           I E  G      W  +  +   + + + P                          L +LI
Sbjct: 213 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHI------------FSAAGDDLLDLI 260

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFK 338
           + L   +P  RI   +    ++F 
Sbjct: 261 QGLFLFNPCARITATQALKMKYFS 284

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 8e-31
 Identities = 66/352 (18%), Positives = 125/352 (35%), Gaps = 49/352 (13%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           R +  +G GA G V    D  +    A+K ++R    +   +           R   E R
Sbjct: 21  RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK-----------RAYRELR 69

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFYAAE 136
           +L+++ H  +  L  V + D+ +    D+          L K    +   +D I+F   +
Sbjct: 70  LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ 129

Query: 137 LVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
           ++  L Y+H  GI++RDLKP N+ + E+  + ++DF L+ +   +           A   
Sbjct: 130 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEV 189

Query: 197 SGIKKRRSFLSKFCSSGISLEDPV--HSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE 254
                R +      S G  + + +   +   G D                         E
Sbjct: 190 ILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-------------------QLKE 230

Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLI 314
           I++  G   A     L     +      P      K+ F  IL     L        NL+
Sbjct: 231 IMKVTGTPPAEFVQRLQSDEAKNYMKGLP---ELEKKDFASILTNASPL------AVNLL 281

Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESD 366
            ++L  D  +R+   E   H +F+ ++          P +  +++   ++ D
Sbjct: 282 EKMLVLDAEQRVTAGEALAHPYFESLHDT-----EDEPQVQ-KYDDSFDDVD 327

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 2e-30
 Identities = 59/351 (16%), Positives = 107/351 (30%), Gaps = 88/351 (25%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKD-----VESSESFALKVIWRDLIEKKSKELTNNDNG 67
           +    + +   LG+G+ G+V+          E     A+K +      ++  E  N    
Sbjct: 17  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN---- 72

Query: 68  DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM--- 124
                   E  V++      + RL GV+S  +     ++     DL S  +     M   
Sbjct: 73  --------EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 124

Query: 125 -----FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
                 S   +   A E+   + YL+    V+RDL   N          +V  D + K+ 
Sbjct: 125 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN---------CMVAEDFTVKIG 175

Query: 180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSE 239
                                                                 ++D   
Sbjct: 176 DFGMT---------------------------------------------RDIYETDYYR 190

Query: 240 KSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL- 297
           K    +    +++PE ++        D WS GVVL E+      P++G S ++    ++ 
Sbjct: 191 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 250

Query: 298 -CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI------KGHEFFKGVN 341
                     P  L  L+R   + +P  R    EI      +    F+ V+
Sbjct: 251 GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 301

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  114 bits (287), Expect = 2e-29
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 12/164 (7%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  +G G+ G V+  +DV +SE  A+K +     +            +K++ I  E R
Sbjct: 18  SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN----------EKWQDIIKEVR 67

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
            L+ + HP   + RG    +      ++YC G     L   +  +   +  I       +
Sbjct: 68  FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGAL 125

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
             L YLH+  +++RD+K  NI++ E G + L DF  ++ ++P  
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.2 bits (239), Expect = 7e-23
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 235 SDSSEKSNSFVGTEEYVAPEIIEG---KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE 291
           +     +NSFVGT  ++APE+I       +D  VD WSLG+   E+     P    +   
Sbjct: 162 ASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221

Query: 292 TFYRILCRPPDLVGE---PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
             Y I       +         RN +   L+K P  R   E +  H F  
Sbjct: 222 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 2e-28
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 16/168 (9%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
                +G+GA G V+   DV + +  A++ +             N     K   I  E  
Sbjct: 23  TRFEKIGQGASGTVYTAMDVATGQEVAIRQM-------------NLQQQPKKELIINEIL 69

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           V+R  ++P +            +   ++Y  G  L  +     E    +  I     E +
Sbjct: 70  VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECL 126

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
            ALE+LH+  +++RD+K +NI++  +G + L DF    +++P+  + S
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 2e-27
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 4/112 (3%)

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK 290
               +    K ++ VGT  ++APE++  K +   VD WSLG++  EM+ G  P+   +  
Sbjct: 163 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222

Query: 291 ETFYRILCRPPDLVGEP----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
              Y I       +  P       R+ + R L+ D  KR   +E+  H+F K
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 2e-28
 Identities = 62/351 (17%), Positives = 123/351 (35%), Gaps = 49/351 (13%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           + +S +G GA G V    D ++    A+K + R        + T             E R
Sbjct: 21  QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----------ELR 69

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVG-----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFY 133
           +L++++H  +  L  V +  + +      Y + +  G DL+++ K Q     +DD ++F 
Sbjct: 70  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFL 126

Query: 134 AAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
             +++  L+Y+H+  I++RDLKP N+ + E+  + ++DF L+     +           A
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186

Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP 253
                     +      S G  + + +                       F GT+     
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG-----RTL-------------FPGTDHIDQL 228

Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNL 313
           ++I         +            Y  +  +    K  F  +      L        +L
Sbjct: 229 KLILRLVGTPGAELLKKISSESARNYIQSLTQ--MPKMNFANVFIGANPL------AVDL 280

Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNE 364
           + ++L  D  KRI   +   H +F     +       P   P     E+ +
Sbjct: 281 LEKMLVLDSDKRITAAQALAHAYFA----QYHDPDDEPVADPYDQSFESRD 327

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (269), Expect = 3e-27
 Identities = 50/350 (14%), Positives = 95/350 (27%), Gaps = 112/350 (32%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G+G  G V+  K     E  A+K+          +E               E      +
Sbjct: 11  IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREA--------------EIYQTVML 54

Query: 84  EHPLLPRLRGVLSTDKFVGYAI----DYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVL 139
            H  +       + D      +    DY     L     + +    + + +   A     
Sbjct: 55  RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTAS 111

Query: 140 ALEYLH--------NMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
            L +LH           I +RDLK +NI++++NG   + D  L+ +    T         
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT--------- 162

Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV 251
                                                             N  VGT+ Y+
Sbjct: 163 -------------------------------------------DTIDIAPNHRVGTKRYM 179

Query: 252 APEIIEGKGH------DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-------- 297
           APE+++   +          D +++G+V  E+    +        +  Y  L        
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239

Query: 298 ---------CRPPDLVGEPTP------LRNLIRRLLEKDPTKRIGVEEIK 332
                       P++            +  ++R     +   R+    IK
Sbjct: 240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 5e-26
 Identities = 61/323 (18%), Positives = 104/323 (32%), Gaps = 69/323 (21%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
           ++   LG G  G V+    V  +   A+K + +D I               +  +    R
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI-------------SDWGELPNGTR 53

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           V   V       L+ V S    V   +D+    D                         V
Sbjct: 54  VPMEVVL-----LKKVSSGFSGVIRLLDWFERPD-----------------------SFV 85

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
           L LE    +  ++         I E G +     +L+     +  +A     +      G
Sbjct: 86  LILERPEPVQDLFD-------FITERGAL---QEELARSFFWQVLEA-----VRHCHNCG 130

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
           +  R           I ++      ++          D+      F GT  Y  PE I  
Sbjct: 131 VLHR-----DIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRY 183

Query: 259 -KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRL 317
            + H  +   WSLG++L++M+ G  PF      E     +     +    +  ++LIR  
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIRGQVFFRQRV---SSECQHLIRWC 238

Query: 318 LEKDPTKRIGVEEIKGHEFFKGV 340
           L   P+ R   EEI+ H + + V
Sbjct: 239 LALRPSDRPTFEEIQNHPWMQDV 261

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (259), Expect = 2e-25
 Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 12/159 (7%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
             +  LG G+ G V LVK  ES   +A+K++ +  + K            +      E+R
Sbjct: 44  DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL----------KQIEHTLNEKR 93

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L+ V  P L +L      +  +   ++Y  G ++ S  ++     FS+   RFYAA++V
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIV 151

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK 177
           L  EYLH++ ++YRDLKPEN++I + G+I + DF  + +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  102 bits (254), Expect = 9e-25
 Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 6/130 (4%)

Query: 242 NSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP 301
            +  GT E +APEII  KG++ AVDWW+LGV+++EM  G  PF      + + +I+    
Sbjct: 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV 255

Query: 302 DLVGE-PTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLLKISRPPNIP 355
                  + L++L+R LL+ D TKR G     V +IK H++F   +W  + +        
Sbjct: 256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFI 315

Query: 356 ARFEHENNES 365
            +F+   + S
Sbjct: 316 PKFKGPGDTS 325

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 2e-24
 Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 13/160 (8%)

Query: 209 FCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK--GHDFAVD 266
                I L+   H             +D +E++  F GT EY+AP+I+ G   GHD AVD
Sbjct: 155 IKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVD 214

Query: 267 WWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIRRLLEKD 321
           WWSLGV+++E+L GA+PF     K +   I        PP         ++LI+RLL KD
Sbjct: 215 WWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKD 274

Query: 322 PTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIP 355
           P KR+G      +EIK H FF+ +NW+ L  K    P  P
Sbjct: 275 PKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKP 314

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 2e-24
 Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 15/170 (8%)

Query: 19  RIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
            ++  LG GA G VFLV+ +   ++ + +A+KV+ +  I +K+K                
Sbjct: 27  ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTT---------EHTRT 77

Query: 76  EQRVLRNVEH-PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYA 134
           E++VL ++   P L  L     T+  +   +DY  G +L +   Q+  + F++  ++ Y 
Sbjct: 78  ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYV 135

Query: 135 AELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
            E+VLALE+LH +GI+YRD+K ENI++  NGH++L DF LS +      +
Sbjct: 136 GEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 185

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 3e-22
 Identities = 40/341 (11%), Positives = 95/341 (27%), Gaps = 84/341 (24%)

Query: 13  LDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNG 67
              + L     LG GA G V           +++ + A+K++       + + L +    
Sbjct: 20  FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---- 75

Query: 68  DKYRRISFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM-- 124
                   E +VL  +  H  +  L G  +         +YC   DL +  +++ +    
Sbjct: 76  --------ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFIC 127

Query: 125 --------------FSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV 170
                            + +  ++ ++   + +L +   ++RDL   NI++       + 
Sbjct: 128 SKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC 187

Query: 171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPP 230
           DF L+  +   +                                         +      
Sbjct: 188 DFGLARDIKNDSNYVVKGNA-----------------------------RLPVKWMAPES 218

Query: 231 SRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK 290
             +   + E      G       E+       +      +    ++M+            
Sbjct: 219 IFNCVYTFESDVWSYG---IFLWELFSLGSSPY--PGMPVDSKFYKMIKEGFRML----- 268

Query: 291 ETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
                    P     E   + ++++   + DP KR   ++I
Sbjct: 269 --------SPEHAPAE---MYDIMKTCWDADPLKRPTFKQI 298

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 85.1 bits (209), Expect = 9e-19
 Identities = 51/386 (13%), Positives = 104/386 (26%), Gaps = 101/386 (26%)

Query: 19  RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
            +V  LG G    V+L KD+ ++   A+K++  D +  ++ E               E +
Sbjct: 16  ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED--------------EIK 61

Query: 79  VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELV 138
           +L+ V      +   + +                 H L+          + +       V
Sbjct: 62  LLQRVNDADNTKEDSMGAN----------------HILKLLDHFNHKGPNGVHVVMVFEV 105

Query: 139 LALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
           L    L  +        P   + Q +  ++L                    +   + R G
Sbjct: 106 LGENLLALIKKYEHRGIPLIYVKQISKQLLL-------------------GLDYMHRRCG 146

Query: 199 IKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG 258
           I        K  +  + + D   +          +     E   + + T EY +PE++ G
Sbjct: 147 IIHT---DIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG 203

Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---------YRILCRPPDLV----- 304
                  D WS   ++ E++ G   F                    +L   P  +     
Sbjct: 204 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 263

Query: 305 -----------------------------------GEPTPLRNLIRRLLEKDPTKRIGVE 329
                                               E   + + +  +L+ DP KR    
Sbjct: 264 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323

Query: 330 EIKGHEFFKGVNWELLLKISRPPNIP 355
            +  H + K       +++       
Sbjct: 324 GLVNHPWLKDTLGMEEIRVPDRELYG 349

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 76.0 bits (186), Expect = 8e-17
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 10/156 (6%)

Query: 24  LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
           +G G +  VF     E      +K         K K     D GD     S         
Sbjct: 8   MGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFK-KVKEKRDYGDL--HFSVLAIRSARN 63

Query: 84  EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEY 143
           E   L +L+G+      V     +     L  L   +       +        ++  +  
Sbjct: 64  EFRALQKLQGL-----AVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAK 118

Query: 144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
            ++ GIV+ DL   N+++ E G I ++DF  S ++ 
Sbjct: 119 FYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVG 153

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	426
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.94
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.7
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.18
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.1
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.44
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.25
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.23

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-67  Score=493.64  Aligned_cols=278  Identities=34%  Similarity=0.607  Sum_probs=242.2

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      +....++|++++.||+|+||+||+|+++.+++.||||++.+......          ...+.+.+|+.+|++++||||++
T Consensus         3 ~~~~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~----------~~~~~~~~E~~il~~l~HpnIv~   72 (288)
T d1uu3a_           3 RKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRLDHPFFVK   72 (288)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHHCCSTTBCC
T ss_pred             CCCCCCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCH----------HHHHHHHHHHHHHHHcCCCCeeE
Confidence            44566889999999999999999999999999999999987654332          23467889999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ++++|.+++.+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+
T Consensus        73 l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~  150 (288)
T d1uu3a_          73 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQIT  150 (288)
T ss_dssp             EEEEEECSSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC
T ss_pred             EEEEEEECCEEEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEec
Confidence            9999999999999999999999999877654  49999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+.+....                                                      ......+.+||+.|
T Consensus       151 DFG~a~~~~~~~------------------------------------------------------~~~~~~~~~GT~~Y  176 (288)
T d1uu3a_         151 DFGTAKVLSPES------------------------------------------------------KQARANSFVGTAQY  176 (288)
T ss_dssp             CCTTCEECC----------------------------------------------------------------CCCCGGG
T ss_pred             ccccceecccCC------------------------------------------------------cccccccccCCccc
Confidence            999998764211                                                      11234456899999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+.++......+ ...++.+++||.+||+.||++|||++
T Consensus       177 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~  256 (288)
T d1uu3a_         177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCE  256 (288)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSG
T ss_pred             cCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHH
Confidence            99999999999999999999999999999999999999999999988765544 35689999999999999999999998


Q ss_pred             H------HhcCCCcCCCChhhhhhccCCCCCC
Q 014344          330 E------IKGHEFFKGVNWELLLKISRPPNIP  355 (426)
Q Consensus       330 e------il~hp~f~~~~~~~~~~~~~~~~~~  355 (426)
                      |      |++||||++++|+.+.+. .||.+|
T Consensus       257 e~~~~~~i~~Hpff~~i~w~~l~~~-~pP~l~  287 (288)
T d1uu3a_         257 EMEGYGPLKAHPFFESVTWENLHQQ-TPPKLT  287 (288)
T ss_dssp             GGTCHHHHHTSGGGTTCCCTTGGGS-CCCCCC
T ss_pred             HHcCCHHHHcCCccCCCCHHHhhcC-CCCCCC
Confidence            8      589999999999998665 455554

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-66  Score=498.09  Aligned_cols=275  Identities=35%  Similarity=0.657  Sum_probs=244.4

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +.+++|++++.||+|+||+||+|+++.+|+.||||++.+......          ...+.+.+|+.+|+.++||||++++
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~----------~~~~~~~~E~~il~~l~hp~Iv~l~   71 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHTVTESRVLQNTRHPFLTALK   71 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCH----------HHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            568899999999999999999999999999999999987765433          2356788899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++|++++.+|+|||||+||+|.+++....  .+++..++.|++||+.||+|||++|||||||||+|||++.+|++||+||
T Consensus        72 ~~~~~~~~~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DF  149 (337)
T d1o6la_          72 YAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF  149 (337)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred             eeeccccccccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeec
Confidence            99999999999999999999999987654  4999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.....                                                        .....+++||+.|||
T Consensus       150 G~a~~~~~~--------------------------------------------------------~~~~~~~~GT~~Y~a  173 (337)
T d1o6la_         150 GLCKEGISD--------------------------------------------------------GATMKTFCGTPEYLA  173 (337)
T ss_dssp             TTCBCSCCT--------------------------------------------------------TCCBCCCEECGGGCC
T ss_pred             ccccccccC--------------------------------------------------------CcccccceeCHHHhh
Confidence            999865321                                                        123456789999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC----
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG----  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s----  327 (426)
                      ||++.+.+|+.++|||||||++|||++|++||.+.+..+.+..+......+ ...++.+++||++||++||.+|++    
T Consensus       174 PE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~  253 (337)
T d1o6la_         174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPS  253 (337)
T ss_dssp             GGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTT
T ss_pred             hhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHhhccCCchhhcccccc
Confidence            999999999999999999999999999999999999999888887665444 356899999999999999999995    


Q ss_pred             -hHHHhcCCCcCCCChhhhhhcc-CCCCCC
Q 014344          328 -VEEIKGHEFFKGVNWELLLKIS-RPPNIP  355 (426)
Q Consensus       328 -~~eil~hp~f~~~~~~~~~~~~-~~~~~~  355 (426)
                       ++||++||||++++|+.+.... .||..|
T Consensus       254 ~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P  283 (337)
T d1o6la_         254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKP  283 (337)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred             cHHHHHcCcccccCCHHHHHhCCCCCCCCC
Confidence             8999999999999999987644 344443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-65  Score=478.30  Aligned_cols=257  Identities=30%  Similarity=0.507  Sum_probs=231.2

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      .+.+++|++++.||+|+||+||+|+++.+++.||+|++.+......          .....+.+|+.+|+.++||||+++
T Consensus         2 ~~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~----------~~~~~~~~E~~il~~l~hpnIv~~   71 (263)
T d2j4za1           2 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA----------GVEHQLRREVEIQSHLRHPNILRL   71 (263)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CcchhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccCh----------HHHHHHHHHHHHHHhcCCCCCCeE
Confidence            4567899999999999999999999999999999999987655432          234578889999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ++++.+++.+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|
T Consensus        72 ~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~D  149 (263)
T d2j4za1          72 YGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD  149 (263)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEECCEEEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecc
Confidence            999999999999999999999999987654  499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|.....                                                          ......+||+.||
T Consensus       150 FG~a~~~~~----------------------------------------------------------~~~~~~~Gt~~Y~  171 (263)
T d2j4za1         150 FGWSVHAPS----------------------------------------------------------SRRTTLCGTLDYL  171 (263)
T ss_dssp             CCSCSCCCC----------------------------------------------------------CCCEETTEEGGGC
T ss_pred             cceeeecCC----------------------------------------------------------CcccccCCCCccc
Confidence            999975431                                                          1233457999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      |||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+.++.......+ ..++.+++||.+||++||++|||++|
T Consensus       172 APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~e  251 (263)
T d2j4za1         172 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLRE  251 (263)
T ss_dssp             CHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            99999999999999999999999999999999999999998888876654443 46889999999999999999999999


Q ss_pred             HhcCCCcC
Q 014344          331 IKGHEFFK  338 (426)
Q Consensus       331 il~hp~f~  338 (426)
                      +|+||||+
T Consensus       252 il~hp~~~  259 (263)
T d2j4za1         252 VLEHPWIT  259 (263)
T ss_dssp             HHTCHHHH
T ss_pred             HHcCcCcC
Confidence            99999996

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.4e-65  Score=485.55  Aligned_cols=272  Identities=34%  Similarity=0.651  Sum_probs=241.3

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG   93 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~   93 (426)
                      .+++|++++.||+|+||+||+|+++.+|+.||||++.+......          ...+.+.+|+.+|+.++||||+++++
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~----------~~~~~~~~E~~il~~l~HpnIv~~~~   71 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL----------KQVEHTNDERLMLSIVTHPFIIRMWG   71 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHSCCBTTBCCEEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCH----------HHHHHHHHHHHHHHhccCcChhheee
Confidence            46789999999999999999999999999999999987654332          23567889999999999999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      ++.+++.+|+|||||.||+|..++....  .+++..++.++.||+.||+|||++|||||||||+||||+.+|.+||+|||
T Consensus        72 ~~~~~~~~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG  149 (316)
T d1fota_          72 TFQDAQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFG  149 (316)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred             eEeeCCeeeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCc
Confidence            9999999999999999999999877654  48999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      +|+....                                                           ...+.+||+.||||
T Consensus       150 ~a~~~~~-----------------------------------------------------------~~~~~~Gt~~Y~AP  170 (316)
T d1fota_         150 FAKYVPD-----------------------------------------------------------VTYTLCGTPDYIAP  170 (316)
T ss_dssp             SCEECSS-----------------------------------------------------------CBCCCCSCTTTCCH
T ss_pred             cceEecc-----------------------------------------------------------ccccccCcccccCH
Confidence            9986531                                                           12345799999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC-----C
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI-----G  327 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~-----s  327 (426)
                      |++.+..|+.++|||||||++|+|++|+.||.+.+..+.+.+++...... ...++.++++|.+||++||.+|+     |
T Consensus       171 E~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t  250 (316)
T d1fota_         171 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNG  250 (316)
T ss_dssp             HHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTT
T ss_pred             HHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhh
Confidence            99999999999999999999999999999999999999998887665444 45688999999999999999996     8


Q ss_pred             hHHHhcCCCcCCCChhhhhhc-cCCCCCCC
Q 014344          328 VEEIKGHEFFKGVNWELLLKI-SRPPNIPA  356 (426)
Q Consensus       328 ~~eil~hp~f~~~~~~~~~~~-~~~~~~~~  356 (426)
                      +++||+||||++++|+.+... ..+|..|.
T Consensus       251 ~~~il~Hp~f~~i~~~~l~~~~~~~p~~p~  280 (316)
T d1fota_         251 TEDVKNHPWFKEVVWEKLLSRNIETPYEPP  280 (316)
T ss_dssp             THHHHTSGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred             HHHHHcCcccccCCHHHHHhCCCCcCCCCC
Confidence            999999999999999988653 34455543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.5e-64  Score=487.92  Aligned_cols=275  Identities=33%  Similarity=0.618  Sum_probs=244.0

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ....+++|++++.||+|+||+||+|+++.+|+.||||++.+......          ...+.+.+|+++|+.++||||++
T Consensus        36 ~~~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~----------~~~~~~~~E~~il~~l~hpnIv~  105 (350)
T d1rdqe_          36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL----------KQIEHTLNEKRILQAVNFPFLVK  105 (350)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHTTCCCTTBCC
T ss_pred             CCCCccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCH----------HHHHHHHHHHHHHHHcCCCcEee
Confidence            45667899999999999999999999999999999999987654332          23567889999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ++++|.+...+|+|||||.||+|..++....  .+++..++.|+.||+.||.|||++|||||||||+|||++.+|++||+
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~  183 (350)
T d1rdqe_         106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT  183 (350)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             cccccccccccccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEee
Confidence            9999999999999999999999999887654  49999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+.+..                                                           ...+.+||+.|
T Consensus       184 DFG~a~~~~~-----------------------------------------------------------~~~~~~Gt~~Y  204 (350)
T d1rdqe_         184 DFGFAKRVKG-----------------------------------------------------------RTWTLCGTPEA  204 (350)
T ss_dssp             CCTTCEECSS-----------------------------------------------------------CBCCCEECGGG
T ss_pred             eceeeeeccc-----------------------------------------------------------ccccccCcccc
Confidence            9999987531                                                           12345799999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCC---
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRI---  326 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~---  326 (426)
                      ||||++.+..|+.++|||||||++|+|++|++||.+.+....+.++....... ...++++.+||++||++||.+|+   
T Consensus       205 ~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~  284 (350)
T d1rdqe_         205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNL  284 (350)
T ss_dssp             CCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSS
T ss_pred             CCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHhhhCHHhccccc
Confidence            99999999999999999999999999999999999999988888887655433 45689999999999999999995   


Q ss_pred             --ChHHHhcCCCcCCCChhhhhhcc-CCCCCCC
Q 014344          327 --GVEEIKGHEFFKGVNWELLLKIS-RPPNIPA  356 (426)
Q Consensus       327 --s~~eil~hp~f~~~~~~~~~~~~-~~~~~~~  356 (426)
                        |+++|++||||++++|+.+.+.. .||.+|.
T Consensus       285 r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~  317 (350)
T d1rdqe_         285 KNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK  317 (350)
T ss_dssp             TTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             cccHHHHHcCccccCCCHHHHHhcCCCcCccCC
Confidence              89999999999999999987643 4455553

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-64  Score=472.57  Aligned_cols=257  Identities=25%  Similarity=0.393  Sum_probs=216.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|+++.+|+.||||++.+....            ...+++.+|+.+|++++||||++++++
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~------------~~~~~~~~Ei~~l~~l~HpnIv~~~~~   71 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV------------DCPENIKKEICINKMLNHENVVKFYGH   71 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------CHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc------------hHHHHHHHHHHHHHhCCCCCEeeEeee
Confidence            56899999999999999999999999999999999654211            123568889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.+++.+|+|||||+||+|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+
T Consensus        72 ~~~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~  149 (271)
T d1nvra_          72 RREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL  149 (271)
T ss_dssp             EEETTEEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             eccCceeEEEEeccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchh
Confidence            99999999999999999999987543  4599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      |+.+....                                                      ......+.+||+.|||||
T Consensus       150 a~~~~~~~------------------------------------------------------~~~~~~~~~GT~~Y~APE  175 (271)
T d1nvra_         150 ATVFRYNN------------------------------------------------------RERLLNKMCGTLPYVAPE  175 (271)
T ss_dssp             CEECEETT------------------------------------------------------EECCBCCCCSCGGGSCTH
T ss_pred             heeeccCC------------------------------------------------------ccccccceeeCcCccCHh
Confidence            98753211                                                      012234568999999999


Q ss_pred             hhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhcCC---CCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          255 IIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETF-YRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       255 ~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~-~~i~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ++.+..+ +.++|||||||++|||++|++||...+..... ..+....   ......++.+.+||.+||+.||++|||++
T Consensus       176 ~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~  255 (271)
T d1nvra_         176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIP  255 (271)
T ss_dssp             HHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            9998876 68899999999999999999999876544333 2332222   12235578899999999999999999999


Q ss_pred             HHhcCCCcCC
Q 014344          330 EIKGHEFFKG  339 (426)
Q Consensus       330 eil~hp~f~~  339 (426)
                      |+|+||||+.
T Consensus       256 eil~hpwf~~  265 (271)
T d1nvra_         256 DIKKDRWYNK  265 (271)
T ss_dssp             HHTTCTTTTC
T ss_pred             HHhcCHhhCc
Confidence            9999999963

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-63  Score=475.49  Aligned_cols=269  Identities=35%  Similarity=0.631  Sum_probs=235.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHH-hcCCCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR-NVEHPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~-~l~hp~iv~l~~   93 (426)
                      +++|++++.||+|+||+||+|+++.+++.||||++.+......          .....+..|..++. .++||||+++++
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~----------~~~~~~~~e~~~l~~~~~hp~Iv~~~~   70 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD----------DDVECTMVEKRVLSLAWEHPFLTHMFC   70 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHT----------TCHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccCh----------HHHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence            4789999999999999999999999999999999987654332          13455666777765 689999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      +|.+++.+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||
T Consensus        71 ~~~~~~~~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG  148 (320)
T d1xjda_          71 TFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG  148 (320)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred             EEccCCceeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccc
Confidence            9999999999999999999999987654  49999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      +++......                                                        ......+||+.|+||
T Consensus       149 ~a~~~~~~~--------------------------------------------------------~~~~~~~gt~~y~aP  172 (320)
T d1xjda_         149 MCKENMLGD--------------------------------------------------------AKTNTFCGTPDYIAP  172 (320)
T ss_dssp             TCBCCCCTT--------------------------------------------------------CCBCCCCSCGGGCCH
T ss_pred             hhhhccccc--------------------------------------------------------ccccccCCCCCcCCH
Confidence            998653211                                                        123345799999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHhccCCCCCCChH-HH
Q 014344          254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-GEPTPLRNLIRRLLEKDPTKRIGVE-EI  331 (426)
Q Consensus       254 E~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~-ei  331 (426)
                      |++.+..|+.++|||||||++|+|++|+.||.+.+..+.+.++....+..+ ..++.+.+||++||++||++|||+. ++
T Consensus       173 E~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l  252 (320)
T d1xjda_         173 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI  252 (320)
T ss_dssp             HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred             HHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHH
Confidence            999999999999999999999999999999999999999888876655443 4689999999999999999999995 89


Q ss_pred             hcCCCcCCCChhhhhhccCC
Q 014344          332 KGHEFFKGVNWELLLKISRP  351 (426)
Q Consensus       332 l~hp~f~~~~~~~~~~~~~~  351 (426)
                      ++||||++++|+.+.....+
T Consensus       253 ~~hpff~~~~~~~l~~~~~~  272 (320)
T d1xjda_         253 RQHPLFREINWEELERKEID  272 (320)
T ss_dssp             GGSGGGTTCCHHHHHTTCSC
T ss_pred             HhCchhccCCHHHHHhcCCC
Confidence            99999999999987654433

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-64  Score=472.30  Aligned_cols=252  Identities=26%  Similarity=0.434  Sum_probs=222.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|++++.||+|+||+||+|+++.+|+.||||++.+...             ...+.+.+|+.+|+.++||||++++++|
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~-------------~~~~~~~~E~~il~~l~HpnIv~~~~~~   86 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-------------PKKELIINEILVMRENKNPNIVNYLDSY   86 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC-------------SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC-------------hHHHHHHHHHHHHHhCCCCCEeeEeEEE
Confidence            479999999999999999999999999999999865321             1235688999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccccc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLS  175 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls  175 (426)
                      .+++.+|+|||||+||+|.+++..   ..+++..++.|+.||+.||+|||++|||||||||+|||++.+|++||+|||+|
T Consensus        87 ~~~~~~~ivmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a  163 (293)
T d1yhwa1          87 LVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC  163 (293)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EECCEEEEEEEecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhh
Confidence            999999999999999999998764   34999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchh
Q 014344          176 TKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEI  255 (426)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  255 (426)
                      +.+....                                                        ......+||+.|||||+
T Consensus       164 ~~~~~~~--------------------------------------------------------~~~~~~~gt~~Y~aPE~  187 (293)
T d1yhwa1         164 AQITPEQ--------------------------------------------------------SKRSTMVGTPYWMAPEV  187 (293)
T ss_dssp             EECCSTT--------------------------------------------------------CCBCCCCSCGGGCCHHH
T ss_pred             eeecccc--------------------------------------------------------ccccccccCCCccChhh
Confidence            8764211                                                        12345579999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-C---CCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-P---DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       256 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~---~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      +.+..|+.++|||||||++|+|++|++||.+.+..+....+.... +   .....+..+++||.+||++||.+|||++|+
T Consensus       188 ~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~ei  267 (293)
T d1yhwa1         188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL  267 (293)
T ss_dssp             HSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             hcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            999999999999999999999999999999998887776665322 1   223457889999999999999999999999


Q ss_pred             hcCCCcCC
Q 014344          332 KGHEFFKG  339 (426)
Q Consensus       332 l~hp~f~~  339 (426)
                      |+||||+.
T Consensus       268 l~Hp~~~~  275 (293)
T d1yhwa1         268 LQHQFLKI  275 (293)
T ss_dssp             TTCGGGGG
T ss_pred             hcCHhhCC
Confidence            99999963

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.9e-63  Score=481.34  Aligned_cols=278  Identities=32%  Similarity=0.590  Sum_probs=232.1

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      |.+++|++++.||+|+||+||+|+++.+|+.||||++.+..+.....       .....+...|+.+++.++|||||+++
T Consensus         1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~-------~~~~~~e~~~~~~l~~~~hpnIv~l~   73 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-------ETLALNERIMLSLVSTGDCPFIVCMS   73 (364)
T ss_dssp             CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTC-------HHHHHHHHHHHHHHSSSCCTTBCCEE
T ss_pred             CCHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhH-------HHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence            46789999999999999999999999999999999998766544311       11223334457777888899999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++|.+++.+|+|||||+||+|.+++....  .+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+||
T Consensus        74 ~~~~~~~~~~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DF  151 (364)
T d1omwa3          74 YAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDL  151 (364)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCC
T ss_pred             EEEEECCEEEEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeee
Confidence            99999999999999999999999987653  4899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.+...                                                          .....+||+.|||
T Consensus       152 Gla~~~~~~----------------------------------------------------------~~~~~~GT~~y~A  173 (364)
T d1omwa3         152 GLACDFSKK----------------------------------------------------------KPHASVGTHGYMA  173 (364)
T ss_dssp             TTCEECSSS----------------------------------------------------------CCCSCCSCGGGCC
T ss_pred             ceeeecCCC----------------------------------------------------------cccccccccccch
Confidence            999865321                                                          2334579999999


Q ss_pred             chhhc-CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCCCCC-CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRPPDL-VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++. +..|+.++|||||||++|||++|+.||.+.+..   .....+...+... ...++.+++||.+||++||++|||
T Consensus       174 PE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  253 (364)
T d1omwa3         174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLG  253 (364)
T ss_dssp             HHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             hHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCC
Confidence            99996 467899999999999999999999999875432   3333444443333 356899999999999999999999


Q ss_pred             -----hHHHhcCCCcCCCChhhhhhcc-CCCCCCCC
Q 014344          328 -----VEEIKGHEFFKGVNWELLLKIS-RPPNIPAR  357 (426)
Q Consensus       328 -----~~eil~hp~f~~~~~~~~~~~~-~~~~~~~~  357 (426)
                           ++||++||||++++|..+.... .||.+|..
T Consensus       254 ~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~  289 (364)
T d1omwa3         254 CLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPR  289 (364)
T ss_dssp             TSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             CcccCHHHHHcCccccCCCHHHHhcCCCCcCcCCCC
Confidence                 7999999999999999886543 44555543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-63  Score=468.07  Aligned_cols=266  Identities=26%  Similarity=0.445  Sum_probs=228.0

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+......       ......+.+.+|+.+|++++|||||+++++|
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~-------~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~   82 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS-------RRGVSREDIEREVSILKEIQHPNVITLHEVY   82 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTC-------SSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchh-------hhhHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            359999999999999999999999999999999976543221       1223456789999999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC----cEEEec
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG----HIMLVD  171 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g----~ikL~D  171 (426)
                      .+++.+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|    .+||+|
T Consensus        83 ~~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~D  160 (293)
T d1jksa_          83 ENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID  160 (293)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECC
T ss_pred             EECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecc
Confidence            99999999999999999999987654  499999999999999999999999999999999999999776    599999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|......                                                         ....+.+||+.|+
T Consensus       161 fG~a~~~~~~---------------------------------------------------------~~~~~~~~t~~y~  183 (293)
T d1jksa_         161 FGLAHKIDFG---------------------------------------------------------NEFKNIFGTPEFV  183 (293)
T ss_dssp             CTTCEECTTS---------------------------------------------------------CBCSCCCCCGGGC
T ss_pred             hhhhhhcCCC---------------------------------------------------------ccccccCCCCccc
Confidence            9999876421                                                         1233457999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..|+.++|||||||++|||++|+.||.+.+..+.+.++.......     ...+..+++||.+||+.||++||
T Consensus       184 APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  263 (293)
T d1jksa_         184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM  263 (293)
T ss_dssp             CHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             CHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCc
Confidence            9999999999999999999999999999999999999999888887654433     35678899999999999999999


Q ss_pred             ChHHHhcCCCcCCCChhhhhh
Q 014344          327 GVEEIKGHEFFKGVNWELLLK  347 (426)
Q Consensus       327 s~~eil~hp~f~~~~~~~~~~  347 (426)
                      |++|||+||||++.+|.....
T Consensus       264 s~~eil~hp~~~~~~~~~~l~  284 (293)
T d1jksa_         264 TIQDSLQHPWIKPKDTQQALS  284 (293)
T ss_dssp             CHHHHHHSTTTCC--------
T ss_pred             CHHHHhcCcccCCCChhHhhc
Confidence            999999999999999877654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.8e-63  Score=470.65  Aligned_cols=253  Identities=30%  Similarity=0.478  Sum_probs=209.6

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      +.|++++.||+|+||+||+|+++.+++.||||++.+.....            ....+.+|+.+|+.++||||++++++|
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~------------~~~~~~~Ei~il~~l~HpnIv~l~~~~   76 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG------------KEGSMENEIAVLHKIKHPNIVALDDIY   76 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------------------CHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh------------HHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            34999999999999999999999999999999997654321            124567899999999999999999999


Q ss_pred             ecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec---cCCcEEEecc
Q 014344           96 STDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ---ENGHIMLVDF  172 (426)
Q Consensus        96 ~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~---~~g~ikL~DF  172 (426)
                      .+++.+|+|||||+||+|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||+.   .+|.+||+||
T Consensus        77 ~~~~~~~lvmE~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DF  154 (307)
T d1a06a_          77 ESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDF  154 (307)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC
T ss_pred             EECCEEEEEEeccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEecc
Confidence            9999999999999999999998753  4599999999999999999999999999999999999995   4789999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.....                                                         ....+.+||+.|||
T Consensus       155 G~a~~~~~~---------------------------------------------------------~~~~~~~GT~~y~A  177 (307)
T d1a06a_         155 GLSKMEDPG---------------------------------------------------------SVLSTACGTPGYVA  177 (307)
T ss_dssp             ---------------------------------------------------------------------------CTTSC
T ss_pred             ceeEEccCC---------------------------------------------------------CeeeeeeeCccccC
Confidence            999754321                                                         12345679999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..|+.++|||||||++|+|++|++||.+.+..+.+..+......     ....++.+.+||.+||++||++|||
T Consensus       178 PE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s  257 (307)
T d1a06a_         178 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT  257 (307)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcC
Confidence            99999999999999999999999999999999999998888888754432     2356889999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      ++|+|+||||++
T Consensus       258 ~~eil~hp~~~~  269 (307)
T d1a06a_         258 CEQALQHPWIAG  269 (307)
T ss_dssp             HHHHHHSTTTTS
T ss_pred             HHHHhcCHhhCC
Confidence            999999999975

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-63  Score=466.55  Aligned_cols=253  Identities=26%  Similarity=0.436  Sum_probs=222.0

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++++.||+|+||+||+|+++.+++.||||++.+.             .....+.+.+|+++|++++|||||++++++.
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~-------------~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~   79 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK-------------SEEELEDYMVEIDILASCDHPNIVKLLDAFY   79 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------------SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC-------------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            589999999999999999999999999999998543             1234567888999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      +++.+|+|||||+||+|.+++.... +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+
T Consensus        80 ~~~~~~lvmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~  158 (288)
T d2jfla1          80 YENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA  158 (288)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             eCCeEEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhh
Confidence            9999999999999999999876543 459999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      .....                                                        .....+.+||+.|||||++
T Consensus       159 ~~~~~--------------------------------------------------------~~~~~~~~Gt~~y~APE~l  182 (288)
T d2jfla1         159 KNTRT--------------------------------------------------------IQRRDSFIGTPYWMAPEVV  182 (288)
T ss_dssp             ECHHH--------------------------------------------------------HHHHTCCCSCCTTCCHHHH
T ss_pred             ccCCC--------------------------------------------------------cccccccccccccCCHHHH
Confidence            54210                                                        0122345799999999998


Q ss_pred             c-----CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC----CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          257 E-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL----VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       257 ~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      .     +..|+.++|||||||++|||++|++||.+.+..+.+.++....+..    ...++++++||.+||+.||++|||
T Consensus       183 ~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  262 (288)
T d2jfla1         183 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWT  262 (288)
T ss_dssp             TTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             hhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcC
Confidence            4     4568999999999999999999999999999888888887553322    345789999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      ++|||+||||+.
T Consensus       263 ~~ell~hp~~~~  274 (288)
T d2jfla1         263 TSQLLQHPFVTV  274 (288)
T ss_dssp             HHHHTTSGGGCC
T ss_pred             HHHHhcCcccCC
Confidence            999999999974

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-63  Score=461.50  Aligned_cols=256  Identities=25%  Similarity=0.352  Sum_probs=213.7

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+....           ....+.+.+|+++|++++||||++++++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-----------~~~~~~~~~E~~il~~l~HpnIv~~~~~   71 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-----------EAEKQMLVSEVNLLRELKHPNIVRYYDR   71 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC-----------HHHHHHHHHHHHHTTSCCCTTBCCEEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC-----------HHHHHHHHHHHHHHHHCCCCCEeeEEEE
Confidence            47899999999999999999999999999999999654322           2245678899999999999999999999


Q ss_pred             eec--CCeEEEEEeccCCCChHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCCCCeeeccCC
Q 014344           95 LST--DKFVGYAIDYCPGRDLHSLRKQQ--SEQMFSDDTIRFYAAELVLALEYLHNMG-----IVYRDLKPENIMIQENG  165 (426)
Q Consensus        95 ~~~--~~~~~lV~Ey~~gg~L~~l~~~~--~~~~l~~~~~~~~~~qil~aL~~LH~~g-----iiHrDlKp~NiLl~~~g  165 (426)
                      +.+  ++.+|+|||||+||+|.+++...  ....+++..++.++.||+.||+|||++|     ||||||||+|||++.+|
T Consensus        72 ~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~  151 (269)
T d2java1          72 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ  151 (269)
T ss_dssp             EEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTS
T ss_pred             EEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCC
Confidence            854  56799999999999999987643  3456999999999999999999999976     99999999999999999


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||+|+.+....                                                        ....+.+
T Consensus       152 ~vkl~DFG~a~~~~~~~--------------------------------------------------------~~~~~~~  175 (269)
T d2java1         152 NVKLGDFGLARILNHDT--------------------------------------------------------SFAKAFV  175 (269)
T ss_dssp             CEEECCHHHHHHC-------------------------------------------------------------------
T ss_pred             cEEEeeccceeecccCC--------------------------------------------------------CccccCC
Confidence            99999999998764211                                                        1234567


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHhccCCC
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--DLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      ||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+...++.....  .....++++.+||.+||+.||.
T Consensus       176 gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~  255 (269)
T d2java1         176 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDY  255 (269)
T ss_dssp             CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             CCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChh
Confidence            99999999999999999999999999999999999999999999888888764432  2345688999999999999999


Q ss_pred             CCCChHHHhcCCCc
Q 014344          324 KRIGVEEIKGHEFF  337 (426)
Q Consensus       324 ~R~s~~eil~hp~f  337 (426)
                      +|||++|||+|||+
T Consensus       256 ~Rps~~ell~hp~i  269 (269)
T d2java1         256 HRPSVEEILENPLI  269 (269)
T ss_dssp             GSCCHHHHHTSTTC
T ss_pred             HCcCHHHHHhCCcC
Confidence            99999999999995

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-63  Score=478.14  Aligned_cols=259  Identities=28%  Similarity=0.445  Sum_probs=217.8

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCccee
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRL   91 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l   91 (426)
                      ++.-++|++++.||+|+||+||+|+++.+|+.||+|++.+..            .......+.+|+.+|+.++|||||++
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~------------~~~~~~~~~~Ei~il~~l~HpnIv~l   69 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI------------KPAIRNQIIRELQVLHECNSPYIVGF   69 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC------------CTTHHHHHHHHGGGGGGCCCTTBCCE
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh------------CHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            355678999999999999999999999999999999985431            12234678899999999999999999


Q ss_pred             eeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCeeeccCCcEEEe
Q 014344           92 RGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        92 ~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++|.+++.+|+|||||+||+|.+++.+..  .+++..++.++.||+.||+|||+ +||+||||||+|||++.+|++||+
T Consensus        70 ~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~  147 (322)
T d1s9ja_          70 YGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC  147 (322)
T ss_dssp             EEEEECSSEEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEEC
T ss_pred             EEEEEECCEEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEe
Confidence            999999999999999999999999987654  49999999999999999999997 599999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+.+..                                                          ...++++||+.|
T Consensus       148 DFGla~~~~~----------------------------------------------------------~~~~~~~GT~~Y  169 (322)
T d1s9ja_         148 DFGVSGQLID----------------------------------------------------------SMANSFVGTRSY  169 (322)
T ss_dssp             CCCCCHHHHH----------------------------------------------------------HTC---CCSSCC
T ss_pred             eCCCccccCC----------------------------------------------------------CccccccCCccc
Confidence            9999986521                                                          123456899999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHH-------------------------------------
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF-------------------------------------  293 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~-------------------------------------  293 (426)
                      ||||++.+..|+.++||||+||++|||++|+.||.+.+..+..                                     
T Consensus       170 ~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (322)
T d1s9ja_         170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMA  249 (322)
T ss_dssp             CCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCC
T ss_pred             cCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchh
Confidence            9999999999999999999999999999999999876532210                                     


Q ss_pred             -----HHHhcCC-CCCC--CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          294 -----YRILCRP-PDLV--GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       294 -----~~i~~~~-~~~~--~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                           ..+.... +...  ..+.++.|||.+||++||.+|||++|+|+||||+..+|
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~~  306 (322)
T d1s9ja_         250 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  306 (322)
T ss_dssp             HHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             HHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCCc
Confidence                 1111111 1111  23678999999999999999999999999999976544

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.9e-62  Score=473.10  Aligned_cols=258  Identities=28%  Similarity=0.444  Sum_probs=227.3

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|+++.+|+.||||++.+...             ...+.+.+|+.+|++|+|||||+++++
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~-------------~~~~~~~~E~~il~~l~HpnIv~~~~~   91 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-------------SDKETVRKEIQTMSVLRHPTLVNLHDA   91 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSH-------------HHHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccch-------------hhHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            4589999999999999999999999999999999854321             234578889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc--CCcEEEecc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE--NGHIMLVDF  172 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~--~g~ikL~DF  172 (426)
                      |.+++.+|+|||||+||+|.+++.... +.+++..++.|+.||+.||+|||++|||||||||+|||++.  +|.+||+||
T Consensus        92 ~~~~~~~~ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DF  170 (350)
T d1koaa2          92 FEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF  170 (350)
T ss_dssp             EEETTEEEEEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCC
T ss_pred             EEECCEEEEEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeec
Confidence            999999999999999999999875433 45999999999999999999999999999999999999964  588999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.+...                                                         ....+.+||+.|||
T Consensus       171 G~a~~~~~~---------------------------------------------------------~~~~~~~gT~~Y~a  193 (350)
T d1koaa2         171 GLTAHLDPK---------------------------------------------------------QSVKVTTGTAEFAA  193 (350)
T ss_dssp             TTCEECCTT---------------------------------------------------------SCEEEECSCTTTCC
T ss_pred             chheecccc---------------------------------------------------------cccceecCcccccC
Confidence            999876421                                                         12345679999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+.++.......     ...+..+++||.+||+.||++|||
T Consensus       194 PEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  273 (350)
T d1koaa2         194 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT  273 (350)
T ss_dssp             HHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC
Confidence            999999999999999999999999999999999999999888887544322     246788999999999999999999


Q ss_pred             hHHHhcCCCcCCCChh
Q 014344          328 VEEIKGHEFFKGVNWE  343 (426)
Q Consensus       328 ~~eil~hp~f~~~~~~  343 (426)
                      ++|||+||||+..+|.
T Consensus       274 ~~eil~hp~~~~~~~~  289 (350)
T d1koaa2         274 IHQALEHPWLTPGNAP  289 (350)
T ss_dssp             HHHHHHSTTTSCTTCC
T ss_pred             HHHHhcCcccCCCCCC
Confidence            9999999999876553

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-61  Score=451.52  Aligned_cols=249  Identities=21%  Similarity=0.375  Sum_probs=212.0

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeec
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLST   97 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~   97 (426)
                      |++.++||+|+||+||+|++..+++.||+|++......           ....+.+.+|+++|++++|||||+++++|.+
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~-----------~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~   79 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-----------KSERQRFKEEAEMLKGLQHPNIVRFYDSWES   79 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-----------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-----------HHHHHHHHHHHHHHHhCCCCCeeeEEEEEee
Confidence            57888999999999999999999999999998654322           1235678899999999999999999999865


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCCCCeeec-cCCcEEEe
Q 014344           98 ----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMG--IVYRDLKPENIMIQ-ENGHIMLV  170 (426)
Q Consensus        98 ----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~g--iiHrDlKp~NiLl~-~~g~ikL~  170 (426)
                          +..+|+|||||+||+|.+++....  .+++..++.++.||+.||+|||++|  |+||||||+|||++ .++.+||+
T Consensus        80 ~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~  157 (270)
T d1t4ha_          80 TVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG  157 (270)
T ss_dssp             ESSSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred             ccccCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEe
Confidence                457899999999999999987653  4999999999999999999999998  99999999999997 57999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+....                                                          ....+.+||+.|
T Consensus       158 DFGla~~~~~----------------------------------------------------------~~~~~~~GT~~Y  179 (270)
T d1t4ha_         158 DLGLATLKRA----------------------------------------------------------SFAKAVIGTPEF  179 (270)
T ss_dssp             CTTGGGGCCT----------------------------------------------------------TSBEESCSSCCC
T ss_pred             ecCcceeccC----------------------------------------------------------CccCCcccCccc
Confidence            9999975321                                                          123456799999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCC---CCCCCHHHHHHHHHHhccCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILCRPPD---LVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      ||||++.+ .|+.++|||||||++|||++|+.||.+.... +.+..+......   ....++++++||.+||++||++||
T Consensus       180 ~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~  258 (270)
T d1t4ha_         180 MAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY  258 (270)
T ss_dssp             CCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred             cCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCc
Confidence            99999976 5999999999999999999999999876544 444555433221   124578899999999999999999


Q ss_pred             ChHHHhcCCCcC
Q 014344          327 GVEEIKGHEFFK  338 (426)
Q Consensus       327 s~~eil~hp~f~  338 (426)
                      |++|||+||||+
T Consensus       259 s~~ell~Hp~fk  270 (270)
T d1t4ha_         259 SIKDLLNHAFFQ  270 (270)
T ss_dssp             CHHHHHTSGGGC
T ss_pred             CHHHHhCCcccC
Confidence            999999999995

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=5.4e-62  Score=471.58  Aligned_cols=255  Identities=27%  Similarity=0.441  Sum_probs=225.3

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+...             .....+.+|+.+|++|+||||++++++
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-------------~~~~~~~~Ei~il~~l~HpnIv~~~~~   94 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-------------LDKYTVKNEISIMNQLHHPKLINLHDA   94 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-------------HHHHHHHHHHHHHTTCCSTTBCCEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcch-------------hHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            3569999999999999999999999999999999865322             123467889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeec--cCCcEEEecc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQ--ENGHIMLVDF  172 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~--~~g~ikL~DF  172 (426)
                      |.+++.+|+|||||+||+|.+++... ...+++..++.++.||+.||+|||++|||||||||+||||+  .+|.+||+||
T Consensus        95 ~~~~~~~~ivmE~~~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DF  173 (352)
T d1koba_          95 FEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDF  173 (352)
T ss_dssp             EECSSEEEEEEECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred             EEECCEEEEEEEcCCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeec
Confidence            99999999999999999998876543 34599999999999999999999999999999999999998  5789999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+|+.+...                                                         ....+.+||+.|||
T Consensus       174 Gla~~~~~~---------------------------------------------------------~~~~~~~gt~~y~a  196 (352)
T d1koba_         174 GLATKLNPD---------------------------------------------------------EIVKVTTATAEFAA  196 (352)
T ss_dssp             TTCEECCTT---------------------------------------------------------SCEEEECSSGGGCC
T ss_pred             ccceecCCC---------------------------------------------------------CceeeccCcccccC
Confidence            999876421                                                         12345679999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..|+.++|||||||++|+|++|++||.+.+..+.+.++......     ....++++++||.+||++||.+|||
T Consensus       197 PE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s  276 (352)
T d1koba_         197 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT  276 (352)
T ss_dssp             HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             HHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC
Confidence            99999999999999999999999999999999999999988888654322     2356889999999999999999999


Q ss_pred             hHHHhcCCCcCCC
Q 014344          328 VEEIKGHEFFKGV  340 (426)
Q Consensus       328 ~~eil~hp~f~~~  340 (426)
                      ++|+|+||||++.
T Consensus       277 ~~eil~Hp~~~~~  289 (352)
T d1koba_         277 VHDALEHPWLKGD  289 (352)
T ss_dssp             HHHHHTSTTTSSC
T ss_pred             HHHHhcCHhhCCC
Confidence            9999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.9e-62  Score=463.28  Aligned_cols=251  Identities=27%  Similarity=0.423  Sum_probs=219.9

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      .|++++.||+|+||+||+|++..+++.||||++.+.....          ....+.+.+|+.+|++++|||||+++++|.
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~----------~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~   85 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----------NEKWQDIIKEVRFLQKLRHPNTIQYRGCYL   85 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCH----------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccC----------HHHHHHHHHHHHHHHHCCCCCEeeEEEEEE
Confidence            3999999999999999999999999999999996543211          234567889999999999999999999999


Q ss_pred             cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccc
Q 014344           97 TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLST  176 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~  176 (426)
                      +++.+|+|||||.||+|..++...  +.+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|.
T Consensus        86 ~~~~~~iv~E~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~  163 (309)
T d1u5ra_          86 REHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS  163 (309)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred             ECCEEEEEEEecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeeccccc
Confidence            999999999999999997665543  459999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhh
Q 014344          177 KLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEII  256 (426)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  256 (426)
                      ....                                                            ....+||+.|||||++
T Consensus       164 ~~~~------------------------------------------------------------~~~~~GT~~Y~APE~~  183 (309)
T d1u5ra_         164 IMAP------------------------------------------------------------ANSFVGTPYWMAPEVI  183 (309)
T ss_dssp             SSSS------------------------------------------------------------BCCCCSCGGGCCHHHH
T ss_pred             ccCC------------------------------------------------------------CCccccCccccCHHHH
Confidence            6421                                                            2345799999999999


Q ss_pred             cC---CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCHHHHHHHHHHhccCCCCCCChHH
Q 014344          257 EG---KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP---DLVGEPTPLRNLIRRLLEKDPTKRIGVEE  330 (426)
Q Consensus       257 ~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e  330 (426)
                      .+   ..|+.++|||||||++|||++|+.||.+.+..+.+.++.....   .....++.+++||.+||+.||.+|||++|
T Consensus       184 ~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~e  263 (309)
T d1u5ra_         184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEV  263 (309)
T ss_dssp             TTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHH
Confidence            75   4589999999999999999999999999998888877764432   22346889999999999999999999999


Q ss_pred             HhcCCCcCC
Q 014344          331 IKGHEFFKG  339 (426)
Q Consensus       331 il~hp~f~~  339 (426)
                      +|+||||..
T Consensus       264 ll~Hp~~~~  272 (309)
T d1u5ra_         264 LLKHRFVLR  272 (309)
T ss_dssp             HTTCHHHHS
T ss_pred             HHhCHHhcC
Confidence            999999953

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.7e-60  Score=446.36  Aligned_cols=262  Identities=30%  Similarity=0.430  Sum_probs=225.6

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~   93 (426)
                      .++|++++.||+|+||+||+|+++.+++.||||++.+.........    ........+.+|+.+|++++ ||||+++++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~----~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~   77 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE----EVQELREATLKEVDILRKVSGHPNIIQLKD   77 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHH----HHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHH----HHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence            3679999999999999999999999999999999976532221100    00123457889999999997 999999999


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEeccc
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFD  173 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFg  173 (426)
                      +|.+++.+|+|||||+||+|.++++.+.  .+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        78 ~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG  155 (277)
T d1phka_          78 TYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG  155 (277)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             ecccCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccch
Confidence            9999999999999999999999987654  49999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccc
Q 014344          174 LSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAP  253 (426)
Q Consensus       174 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  253 (426)
                      +++.+...                                                         ......+||+.|+||
T Consensus       156 ~a~~~~~~---------------------------------------------------------~~~~~~~gt~~y~~P  178 (277)
T d1phka_         156 FSCQLDPG---------------------------------------------------------EKLREVCGTPSYLAP  178 (277)
T ss_dssp             TCEECCTT---------------------------------------------------------CCBCCCCSCGGGCCH
T ss_pred             heeEccCC---------------------------------------------------------CceeeeeccCCCCCH
Confidence            99876421                                                         122345799999999


Q ss_pred             hhhcC------CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHhccCC
Q 014344          254 EIIEG------KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD-----LVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       254 E~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~li~~~L~~dP  322 (426)
                      |++.+      ..++.++||||+||++|+|++|+.||.+.+.......+......     ....++++++||.+||+.||
T Consensus       179 E~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p  258 (277)
T d1phka_         179 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQP  258 (277)
T ss_dssp             HHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSG
T ss_pred             HHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCCh
Confidence            99863      34688999999999999999999999999998888887754322     22568899999999999999


Q ss_pred             CCCCChHHHhcCCCcCC
Q 014344          323 TKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       323 ~~R~s~~eil~hp~f~~  339 (426)
                      ++|||++|||+||||+.
T Consensus       259 ~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         259 QKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             GGSCCHHHHTTSGGGCT
T ss_pred             hHCcCHHHHHcCHHHHH
Confidence            99999999999999975

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-60  Score=456.67  Aligned_cols=253  Identities=22%  Similarity=0.349  Sum_probs=224.5

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|+++.+++.||||++.+...              ....+.+|+.+|+.++||||++++++
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~--------------~~~~~~~Ei~il~~l~HpnIv~~~~~   69 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT--------------DQVLVKKEISILNIARHRNILHLHES   69 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH--------------HHHHHHHHHHHHHHSCCTTBCCEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc--------------cHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            4679999999999999999999999999999999965422              12357789999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccC--CcEEEecc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQEN--GHIMLVDF  172 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~--g~ikL~DF  172 (426)
                      |++++.+|+|||||+||+|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++.+  +.+||+||
T Consensus        70 ~~~~~~~~lvmE~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DF  148 (321)
T d1tkia_          70 FESMEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEF  148 (321)
T ss_dssp             EEETTEEEEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred             EEECCEEEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEccc
Confidence            999999999999999999999886543 359999999999999999999999999999999999999854  48999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+++.....                                                         ....+.+||+.|+|
T Consensus       149 G~~~~~~~~---------------------------------------------------------~~~~~~~~t~~y~a  171 (321)
T d1tkia_         149 GQARQLKPG---------------------------------------------------------DNFRLLFTAPEYYA  171 (321)
T ss_dssp             TTCEECCTT---------------------------------------------------------CEEEEEESCGGGSC
T ss_pred             chhhccccC---------------------------------------------------------Cccccccccccccc
Confidence            999865321                                                         12345579999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-----CCCHHHHHHHHHHhccCCCCCCC
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV-----GEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      ||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+.++......+.     ..+.++++||.+||++||.+|||
T Consensus       172 pe~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s  251 (321)
T d1tkia_         172 PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT  251 (321)
T ss_dssp             HHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             chhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcC
Confidence            9999999999999999999999999999999999999999998876554433     46888999999999999999999


Q ss_pred             hHHHhcCCCcCC
Q 014344          328 VEEIKGHEFFKG  339 (426)
Q Consensus       328 ~~eil~hp~f~~  339 (426)
                      ++|+|+||||+.
T Consensus       252 ~~eil~hp~~~~  263 (321)
T d1tkia_         252 ASEALQHPWLKQ  263 (321)
T ss_dssp             HHHHHHSHHHHS
T ss_pred             HHHHhcCHhhcc
Confidence            999999999964

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-59  Score=444.61  Aligned_cols=258  Identities=29%  Similarity=0.432  Sum_probs=216.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|++++.||+|+||+||+|++..+|+.||||++......           ......+.+|+++|++++||||++++++
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-----------~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~   69 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-----------EGVPSTAIREISLLKELNHPNIVKLLDV   69 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC------------------CCHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcC-----------hHHHHHHHHHHHHHHhCCCCcEEEeccc
Confidence            46899999999999999999999999999999999554321           1234678889999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      |.++..+|+|||||.+ .+.+++.......+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+
T Consensus        70 ~~~~~~~~iv~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~  148 (298)
T d1gz8a_          70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL  148 (298)
T ss_dssp             EEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTH
T ss_pred             cccccceeEEEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCc
Confidence            9999999999999975 455555555556699999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      |+.....                                                        .......+||+.|+|||
T Consensus       149 a~~~~~~--------------------------------------------------------~~~~~~~~gt~~y~apE  172 (298)
T d1gz8a_         149 ARAFGVP--------------------------------------------------------VRTYTHEVVTLWYRAPE  172 (298)
T ss_dssp             HHHHCCC--------------------------------------------------------SBCTTCCBCCCTTCCHH
T ss_pred             ceeccCC--------------------------------------------------------cccceeecccceeeehh
Confidence            9765321                                                        12334557999999999


Q ss_pred             hhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC---------------------------C
Q 014344          255 IIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD---------------------------L  303 (426)
Q Consensus       255 ~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~---------------------------~  303 (426)
                      ++....+ +.++|||||||++|+|++|+.||.+.+..+.+.++..   .+..                           .
T Consensus       173 ~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (298)
T d1gz8a_         173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV  252 (298)
T ss_dssp             HHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHS
T ss_pred             hhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhc
Confidence            9887664 7999999999999999999999999988877766531   1000                           1


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      ...+.++++||++||++||++|||++|||+||||+++
T Consensus       253 ~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence            1335778999999999999999999999999999865

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-60  Score=448.38  Aligned_cols=256  Identities=25%  Similarity=0.390  Sum_probs=212.0

Q ss_pred             EEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecC
Q 014344           19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTD   98 (426)
Q Consensus        19 ~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~   98 (426)
                      +.++.||+|+||+||+|+++.+|+.||||++.+......        .....+.+.+|+.+|+.++|||||+++++|.++
T Consensus         1 E~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--------~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~   72 (299)
T d1ua2a_           1 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA--------KDGINRTALREIKLLQELSHPNIIGLLDAFGHK   72 (299)
T ss_dssp             CEEEEEEEETTEEEEEEECSSCCSEEEEEEC--------------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             CcceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhh--------hHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccC
Confidence            357899999999999999999999999999965432211        112346788999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccC
Q 014344           99 KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL  178 (426)
Q Consensus        99 ~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~  178 (426)
                      +.+|+|||||.|+++..+..  ....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus        73 ~~~~ivmE~~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~  150 (299)
T d1ua2a_          73 SNISLVFDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF  150 (299)
T ss_dssp             TCCEEEEECCSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             CceeehhhhhcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCcccccc
Confidence            99999999999887766543  3455999999999999999999999999999999999999999999999999999765


Q ss_pred             CCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcC
Q 014344          179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEG  258 (426)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  258 (426)
                      ....                                                        ....+.+||+.|+|||++.+
T Consensus       151 ~~~~--------------------------------------------------------~~~~~~~gt~~y~aPE~~~~  174 (299)
T d1ua2a_         151 GSPN--------------------------------------------------------RAYTHQVVTRWYRAPELLFG  174 (299)
T ss_dssp             TSCC--------------------------------------------------------CCCCCSCCCCTTCCHHHHTT
T ss_pred             CCCc--------------------------------------------------------ccccceecChhhccHHHHcc
Confidence            3211                                                        12334579999999999875


Q ss_pred             -CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CCCC--------------------------CCCCCH
Q 014344          259 -KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPPD--------------------------LVGEPT  308 (426)
Q Consensus       259 -~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~--------------------------~~~~~~  308 (426)
                       ..|+.++|||||||++|||++|.+||.+.+..+++.++..   .+..                          ....+.
T Consensus       175 ~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  254 (299)
T d1ua2a_         175 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGD  254 (299)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCH
T ss_pred             CCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCH
Confidence             5689999999999999999999999999998888776642   1100                          013467


Q ss_pred             HHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       309 ~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                      .+.+||.+||++||++|||++|+|+||||++.
T Consensus       255 ~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         255 DLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence            89999999999999999999999999999753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-60  Score=456.10  Aligned_cols=250  Identities=25%  Similarity=0.403  Sum_probs=209.6

Q ss_pred             CCCcEEEe-eecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHh-cCCCCcceee
Q 014344           15 FSCLRIVS-ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN-VEHPLLPRLR   92 (426)
Q Consensus        15 ~~~y~i~~-~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~l~   92 (426)
                      +++|+|+. .||+|+||+||+|++..+++.||||++.+.                  ..+.+|+.++.+ ++|||||+++
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~------------------~~~~~E~~~~~~~~~hpnIv~l~   71 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------------------PKARREVELHWRASQCPHIVRIV   71 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS------------------HHHHHHHHHHHHHTTSTTBCCEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc------------------HHHHHHHHHHHHhcCCCCCCeEE
Confidence            57899986 599999999999999999999999998432                  345669988765 5899999999


Q ss_pred             eeeec----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---CC
Q 014344           93 GVLST----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---NG  165 (426)
Q Consensus        93 ~~~~~----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~g  165 (426)
                      ++|++    +..+|+|||||+||+|.+++.......+++..++.|+.||+.||+|||++||+||||||+|||++.   .+
T Consensus        72 ~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~  151 (335)
T d2ozaa1          72 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA  151 (335)
T ss_dssp             EEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTC
T ss_pred             EEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccc
Confidence            99975    567999999999999999998765567999999999999999999999999999999999999985   56


Q ss_pred             cEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 014344          166 HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFV  245 (426)
Q Consensus       166 ~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (426)
                      .+||+|||+|+.....                                                         ......+
T Consensus       152 ~~Kl~DFG~a~~~~~~---------------------------------------------------------~~~~~~~  174 (335)
T d2ozaa1         152 ILKLTDFGFAKETTSH---------------------------------------------------------NSLTTPC  174 (335)
T ss_dssp             CEEECCCTTCEECCCC---------------------------------------------------------CCCCCCS
T ss_pred             cccccccceeeeccCC---------------------------------------------------------Ccccccc
Confidence            8999999999866422                                                         1233457


Q ss_pred             cCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh----cCCCCCC-----CCCHHHHHHHHH
Q 014344          246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLV-----GEPTPLRNLIRR  316 (426)
Q Consensus       246 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~----~~~~~~~-----~~~~~~~~li~~  316 (426)
                      ||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+.......+.    .....++     ..++++.+||++
T Consensus       175 gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  254 (335)
T d2ozaa1         175 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN  254 (335)
T ss_dssp             CCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHH
T ss_pred             CCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999998876544433332    2222222     357889999999


Q ss_pred             HhccCCCCCCChHHHhcCCCcCC
Q 014344          317 LLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       317 ~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ||++||++|||+.|||+||||+.
T Consensus       255 ~L~~dP~~R~s~~eil~hp~~~~  277 (335)
T d2ozaa1         255 LLKTEPTQRMTITEFMNHPWIMQ  277 (335)
T ss_dssp             HSCSSTTTSCCHHHHHHSHHHHT
T ss_pred             HccCChhHCcCHHHHHcCHHhhC
Confidence            99999999999999999999953

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-59  Score=442.71  Aligned_cols=258  Identities=29%  Similarity=0.388  Sum_probs=213.1

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCC-CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc---CCCCccee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVES-SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV---EHPLLPRL   91 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l---~hp~iv~l   91 (426)
                      ++|+++++||+|+||+||+|++..+ ++.||||++.+.....           .....+.+|+.+|+.|   +||||+++
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-----------~~~~~~~~E~~~l~~l~~~~HpnIv~~   75 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-----------GMPLSTIREVAVLRHLETFEHPNVVRL   75 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-----------SCBCTHHHHHHHHHHHHHTCCTTBCCE
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc-----------hHHHHHHHHHHHHHHHhhcCCCCccee
Confidence            5799999999999999999999765 6689999986532111           1223455677777766   79999999


Q ss_pred             eeeeec-----CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           92 RGVLST-----DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        92 ~~~~~~-----~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      +++|..     ...+|++||||.++++... .......+++..++.++.||+.||+|||++|||||||||+|||++.+|.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~  154 (305)
T d1blxa_          76 FDVCTVSRTDRETKLTLVFEHVDQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ  154 (305)
T ss_dssp             EEEEEEEECSSEEEEEEEEECCSCBHHHHH-HHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred             eeeecccccccCceEEEEEEeccCCchhhh-hhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCC
Confidence            999853     4578999999987776544 3344456999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++.....                                                         .......+|
T Consensus       155 ~kl~dfg~~~~~~~---------------------------------------------------------~~~~~~~~g  177 (305)
T d1blxa_         155 IKLADFGLARIYSF---------------------------------------------------------QMALTSVVV  177 (305)
T ss_dssp             EEECSCCSCCCCCG---------------------------------------------------------GGGGCCCCC
T ss_pred             eeecchhhhhhhcc---------------------------------------------------------cccCCCccc
Confidence            99999999875421                                                         112345579


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C-----------------------
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P-----------------------  300 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~-----------------------  300 (426)
                      |+.|||||++.+..|+.++||||+||++|||++|++||.+.+..+++.+++..   +                       
T Consensus       178 T~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (305)
T d1blxa_         178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQP  257 (305)
T ss_dssp             CCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCC
T ss_pred             ChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccc
Confidence            99999999999999999999999999999999999999999988887766421   0                       


Q ss_pred             --CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          301 --PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       301 --~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                        ......++.+++||.+||++||++|||++|+|+||||+++++
T Consensus       258 ~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~  301 (305)
T d1blxa_         258 IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  301 (305)
T ss_dssp             GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             hhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence              011234678999999999999999999999999999998753

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-59  Score=438.48  Aligned_cols=253  Identities=26%  Similarity=0.352  Sum_probs=211.6

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC--CCCcceeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE--HPLLPRLRG   93 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~iv~l~~   93 (426)
                      ++|++++.||+|+||+||+|++..+|+.||||++.+.......       ......++.+|+.+|++++  ||||+++++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~-------~~~~~~~~~~E~~il~~l~~~h~nIv~~~~   76 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG-------ELPNGTRVPMEVVLLKKVSSGFSGVIRLLD   76 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEE-------ECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchh-------hhhHHHHHHHHHHHHHHhccCCCCccEEEE
Confidence            4699999999999999999999999999999999765433211       0112234667999999997  899999999


Q ss_pred             eeecCCeEEEEEeccCC-CChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-CCcEEEec
Q 014344           94 VLSTDKFVGYAIDYCPG-RDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-NGHIMLVD  171 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~g-g~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-~g~ikL~D  171 (426)
                      +|.+++.+|+||||+.+ +++.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|
T Consensus        77 ~~~~~~~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~D  154 (273)
T d1xwsa_          77 WFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID  154 (273)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             EEeeCCeEEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECc
Confidence            99999999999999986 5777777654  34999999999999999999999999999999999999985 47999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+....                                                          ....+.+||+.|+
T Consensus       155 FG~a~~~~~----------------------------------------------------------~~~~~~~GT~~y~  176 (273)
T d1xwsa_         155 FGSGALLKD----------------------------------------------------------TVYTDFDGTRVYS  176 (273)
T ss_dssp             CTTCEECCS----------------------------------------------------------SCBCCCCSCGGGS
T ss_pred             cccceeccc----------------------------------------------------------ccccccccCCCcC
Confidence            999875421                                                          1233567999999


Q ss_pred             cchhhcCCCC-ChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          252 APEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       252 aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      |||++.+..+ +.++|||||||++|+|++|+.||.+.+  .    +.. ........++++++||.+||+.||++|||++
T Consensus       177 aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~----i~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~  250 (273)
T d1xwsa_         177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E----IIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE  250 (273)
T ss_dssp             CHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch--H----HhhcccCCCCCCCHHHHHHHHHHccCCHhHCcCHH
Confidence            9999987765 678999999999999999999997642  1    222 2222335689999999999999999999999


Q ss_pred             HHhcCCCcCCCC
Q 014344          330 EIKGHEFFKGVN  341 (426)
Q Consensus       330 eil~hp~f~~~~  341 (426)
                      |+|+||||+++.
T Consensus       251 eil~hp~~~~~~  262 (273)
T d1xwsa_         251 EIQNHPWMQDVL  262 (273)
T ss_dssp             HHHTSGGGSSCC
T ss_pred             HHhcCHhhCCCC
Confidence            999999998754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-58  Score=442.45  Aligned_cols=281  Identities=38%  Similarity=0.695  Sum_probs=231.5

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEc---CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC-C
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH-P   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~---~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p   86 (426)
                      ..+.+++|++++.||+|+||+||+|++.   .+|+.||||++.+......         ....+.+.+|+.+|++++| |
T Consensus        19 ~~~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~---------~~~~~~~~~E~~il~~l~h~p   89 (322)
T d1vzoa_          19 EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK---------AKTTEHTRTERQVLEHIRQSP   89 (322)
T ss_dssp             CCCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE---------ESSGGGCCCHHHHHHHHHTCT
T ss_pred             cccchhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccc---------hHHHHHHHHHHHHHHhccCCC
Confidence            4467899999999999999999999984   4789999999966443221         1123456779999999987 8


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      ||+++++++.+...+|+|||||.||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.
T Consensus        90 nIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~  167 (322)
T d1vzoa_          90 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH  167 (322)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC
T ss_pred             eEEEeeeeeccCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCC
Confidence            99999999999999999999999999999987654  4889999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||+|+.+....                                                       .....+..|
T Consensus       168 vkL~DFG~a~~~~~~~-------------------------------------------------------~~~~~~~~g  192 (322)
T d1vzoa_         168 VVLTDFGLSKEFVADE-------------------------------------------------------TERAYDFCG  192 (322)
T ss_dssp             EEESCSSEEEECCGGG-------------------------------------------------------GGGGCGGGS
T ss_pred             EEEeeccchhhhcccc-------------------------------------------------------ccccccccc
Confidence            9999999998663211                                                       122345679


Q ss_pred             CCCCccchhhcCC--CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHhc-CCCCCCCCCHHHHHHHHHHhc
Q 014344          247 TEEYVAPEIIEGK--GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF----YRILC-RPPDLVGEPTPLRNLIRRLLE  319 (426)
Q Consensus       247 t~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~----~~i~~-~~~~~~~~~~~~~~li~~~L~  319 (426)
                      |+.|+|||.+.+.  .++.++|||||||+||+|++|+.||.+.+.....    ..... .++.....++.+.+||.+||+
T Consensus       193 ~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~  272 (322)
T d1vzoa_         193 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLM  272 (322)
T ss_dssp             CCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             ccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcc
Confidence            9999999999765  4678999999999999999999999876543332    22222 233344678999999999999


Q ss_pred             cCCCCCC-----ChHHHhcCCCcCCCChhhhhhccCCCCCCCC
Q 014344          320 KDPTKRI-----GVEEIKGHEFFKGVNWELLLKISRPPNIPAR  357 (426)
Q Consensus       320 ~dP~~R~-----s~~eil~hp~f~~~~~~~~~~~~~~~~~~~~  357 (426)
                      +||.+||     |++|+++||||++++|+.+.....|+++.+.
T Consensus       273 ~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~  315 (322)
T d1vzoa_         273 KDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPV  315 (322)
T ss_dssp             SSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             cCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCCC
Confidence            9999999     4899999999999999999876666555433

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.9e-58  Score=432.85  Aligned_cols=254  Identities=22%  Similarity=0.294  Sum_probs=218.2

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      ++++.++|+++++||+|+||+||+|+++.+++.||||++.++.              ...+.+.+|+.+|++++|||||+
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~--------------~~~~~~~~E~~il~~l~HpnIv~   77 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMKEIKHPNLVQ   77 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC--------------SCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc--------------chHHHHHHHHHHHHhCCCCCEec
Confidence            6788899999999999999999999999999999999985421              12457889999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++.+++.+|+|||||++|+|.+++.......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+
T Consensus        78 ~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~  157 (287)
T d1opja_          78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA  157 (287)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             CCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEc
Confidence            99999999999999999999999999887666779999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+......                                                       ........||+.|
T Consensus       158 DFG~a~~~~~~~-------------------------------------------------------~~~~~~~~g~~~y  182 (287)
T d1opja_         158 DFGLSRLMTGDT-------------------------------------------------------YTAHAGAKFPIKW  182 (287)
T ss_dssp             CCCCTTTCCSSS-------------------------------------------------------SEEETTEEECGGG
T ss_pred             cccceeecCCCC-------------------------------------------------------ceeeccccccccc
Confidence            999998653211                                                       0112233589999


Q ss_pred             ccchhhcCCCCChhhHHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCCCC
Q 014344          251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRIG  327 (426)
Q Consensus       251 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~p-f~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s  327 (426)
                      +|||++.+..|+.++|||||||++|||++|..| |.+.+....+..+..  .++.....+..+.+||.+||+.||.+|||
T Consensus       183 ~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps  262 (287)
T d1opja_         183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS  262 (287)
T ss_dssp             CCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcC
Confidence            999999999999999999999999999996555 555565555544433  23344567899999999999999999999


Q ss_pred             hHHHhc
Q 014344          328 VEEIKG  333 (426)
Q Consensus       328 ~~eil~  333 (426)
                      ++||++
T Consensus       263 ~~ei~~  268 (287)
T d1opja_         263 FAEIHQ  268 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999976

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.8e-58  Score=432.11  Aligned_cols=255  Identities=25%  Similarity=0.402  Sum_probs=212.8

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|+++++||+|+||+||+|+++ +|+.||||++......           .....++.+|+.+|++++||||++++++
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~-----------~~~~~~~~~E~~il~~l~hpnIv~~~~~   68 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED-----------EGIPSTTIREISILKELKHSNIVKLYDV   68 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGG-----------GCCCHHHHHHHHGGGGCCCTTBCCEEEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcC-----------hHHHHHHHHHHHHHHhCCCCcEEeeeee
Confidence            468999999999999999999985 7899999999554221           1234678899999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      |..++..|++|||+.++++..+...  .+.+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+
T Consensus        69 ~~~~~~~~i~~e~~~~~~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~  146 (286)
T d1ob3a_          69 IHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGL  146 (286)
T ss_dssp             EECSSCEEEEEECCSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred             cccCCceeEEEEeehhhhHHHHHhh--cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEeccccc
Confidence            9999999999999987777666443  35599999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      |......                                                        .......+||+.|+|||
T Consensus       147 a~~~~~~--------------------------------------------------------~~~~~~~~~~~~y~~pE  170 (286)
T d1ob3a_         147 ARAFGIP--------------------------------------------------------VRKYTHEIVTLWYRAPD  170 (286)
T ss_dssp             HHHHCC-----------------------------------------------------------------CCCTTCCHH
T ss_pred             ceecccC--------------------------------------------------------ccccceecccchhhhHH
Confidence            9865321                                                        11233456999999999


Q ss_pred             hhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC---------------------------CCC
Q 014344          255 IIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP---------------------------PDL  303 (426)
Q Consensus       255 ~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~---------------------------~~~  303 (426)
                      .+.+. .++.++|||||||++|||++|++||.+.+..+++.++..   .+                           ...
T Consensus       171 ~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (286)
T d1ob3a_         171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL  250 (286)
T ss_dssp             HHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTC
T ss_pred             HHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhc
Confidence            99764 569999999999999999999999999988877766531   10                           001


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ...++.+.|||++||++||++|||++|||+||||++
T Consensus       251 ~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            234677899999999999999999999999999973

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.6e-57  Score=427.39  Aligned_cols=260  Identities=23%  Similarity=0.331  Sum_probs=209.6

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCc---eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSE---SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ++++.++|++.+.||+|+||+||+|+++.+++   .||||++....            .....+.+.+|+.+|++++|||
T Consensus        21 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~Hpn   88 (299)
T d1jpaa_          21 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY------------TEKQRRDFLSEASIMGQFDHPN   88 (299)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC------------CHHHHHHHHHHHHHHTTCCCTT
T ss_pred             hhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc------------CHHHHHHHHHHHHHHHhCCCCC
Confidence            35778899999999999999999999987765   58888874321            2234567899999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ||++++++..++.+|+|||||+||+|.+++.... +.+++..+..++.||+.||+|||++||+||||||+||||+.++++
T Consensus        89 Iv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~  167 (299)
T d1jpaa_          89 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVC  167 (299)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred             CccEEEEEeeCCEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcE
Confidence            9999999999999999999999999999876543 459999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||+|+.+.......                                                   .........||
T Consensus       168 Kl~DFGla~~~~~~~~~~---------------------------------------------------~~~~~~~~~~t  196 (299)
T d1jpaa_         168 KVSDFGLSRFLEDDTSDP---------------------------------------------------TYTSALGGKIP  196 (299)
T ss_dssp             EECCC--------------------------------------------------------------------------C
T ss_pred             EECCcccceEccCCCCcc---------------------------------------------------eeeecccccCC
Confidence            999999998764321100                                                   01112234589


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.|||||++.+..|+.++|||||||++|||++ |++||.+.+..+....+...  ++.....+..+.+||.+||+.||++
T Consensus       197 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~  276 (299)
T d1jpaa_         197 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNH  276 (299)
T ss_dssp             GGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTT
T ss_pred             ccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhH
Confidence            99999999999999999999999999999997 89999999988887777643  3445567899999999999999999


Q ss_pred             CCChHHHhcC
Q 014344          325 RIGVEEIKGH  334 (426)
Q Consensus       325 R~s~~eil~h  334 (426)
                      |||+.||+++
T Consensus       277 RPs~~ei~~~  286 (299)
T d1jpaa_         277 RPKFGQIVNT  286 (299)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-57  Score=427.41  Aligned_cols=254  Identities=22%  Similarity=0.315  Sum_probs=208.1

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcce
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPR   90 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~   90 (426)
                      |+++.++|++++.||+|+||+||+|+..   ..||||++....           ......+.+.+|+.+|++++||||++
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~-----------~~~~~~~~~~~E~~~l~~l~HpnIv~   68 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-----------PTPQQLQAFKNEVGVLRKTRHVNILL   68 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSS-----------CCTTHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEccc-----------CCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            5788899999999999999999999753   469999985432           12235678899999999999999999


Q ss_pred             eeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           91 LRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        91 l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      +++++. +..+|+|||||+||+|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++++||+
T Consensus        69 ~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~  146 (276)
T d1uwha_          69 FMGYST-APQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG  146 (276)
T ss_dssp             EEEEEC-SSSCEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEEC
T ss_pred             eeEEEe-ccEEEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEc
Confidence            999864 566899999999999999886543 459999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||+|+......                                                      ......+.+||+.|
T Consensus       147 DFGla~~~~~~~------------------------------------------------------~~~~~~~~~gt~~y  172 (276)
T d1uwha_         147 DFGLATVKSRWS------------------------------------------------------GSHQFEQLSGSILW  172 (276)
T ss_dssp             CCCCSCC------------------------------------------------------------------CCCCGGG
T ss_pred             cccceeeccccC------------------------------------------------------CcccccccccCccc
Confidence            999997653211                                                      01123456799999


Q ss_pred             ccchhhcC---CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-C--CC----CCCCCCHHHHHHHHHHhcc
Q 014344          251 VAPEIIEG---KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC-R--PP----DLVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       251 ~aPE~~~~---~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-~--~~----~~~~~~~~~~~li~~~L~~  320 (426)
                      ||||++.+   ..|+.++|||||||++|||++|+.||.+.+........+. .  .+    .....+..+.+||.+||..
T Consensus       173 ~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~  252 (276)
T d1uwha_         173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKK  252 (276)
T ss_dssp             CCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCS
T ss_pred             CCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCC
Confidence            99999975   3489999999999999999999999998776655444432 1  11    1235678999999999999


Q ss_pred             CCCCCCChHHHhcC
Q 014344          321 DPTKRIGVEEIKGH  334 (426)
Q Consensus       321 dP~~R~s~~eil~h  334 (426)
                      ||++|||++||++|
T Consensus       253 dp~~RPt~~~il~~  266 (276)
T d1uwha_         253 KRDERPLFPQILAS  266 (276)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999976

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-57  Score=435.82  Aligned_cols=258  Identities=18%  Similarity=0.298  Sum_probs=216.3

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCCc-----eEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-C
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSE-----SFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-E   84 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~   84 (426)
                      ++++.++|++++.||+|+||+||+|++..+++     .||+|++....            .......+.+|+.+|+++ +
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~~   99 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA------------DSSEREALMSELKMMTQLGS   99 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------CHHHHHHHHHHHHHCC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc------------CHHHHHHHHHHHHHHHHhcC
Confidence            45777899999999999999999999876554     68999885432            112345788899999998 8


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhcc---------------------CCCCHHHHHHHHHHHHHHHHH
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE---------------------QMFSDDTIRFYAAELVLALEY  143 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~---------------------~~l~~~~~~~~~~qil~aL~~  143 (426)
                      |||||++++++.+.+.+|+|||||+||+|.++++....                     ..+++..++.|+.||+.||+|
T Consensus       100 HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~y  179 (325)
T d1rjba_         100 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF  179 (325)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             CCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999875432                     348999999999999999999


Q ss_pred             HHHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCC
Q 014344          144 LHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSP  223 (426)
Q Consensus       144 LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (426)
                      ||++|||||||||+|||++.++++||+|||+|+......                                         
T Consensus       180 LH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~-----------------------------------------  218 (325)
T d1rjba_         180 LEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS-----------------------------------------  218 (325)
T ss_dssp             HHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCT-----------------------------------------
T ss_pred             HHhCCeeeccCchhccccccCCeEEEeeccccccccCCC-----------------------------------------
Confidence            999999999999999999999999999999997653211                                         


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC---
Q 014344          224 RIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR---  299 (426)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~---  299 (426)
                                   ......+.+||+.|||||++.+..|+.++|||||||++|||++ |++||.+.+..+.+.+++..   
T Consensus       219 -------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~  285 (325)
T d1rjba_         219 -------------NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFK  285 (325)
T ss_dssp             -------------TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCC
T ss_pred             -------------ceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC
Confidence                         0112234568999999999999999999999999999999997 89999987776666666543   


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       300 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      ++.....+..+++||.+||+.||++|||++||++|
T Consensus       286 ~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         286 MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            33344668899999999999999999999999976

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.6e-57  Score=425.60  Aligned_cols=255  Identities=25%  Similarity=0.423  Sum_probs=210.6

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|++..+|+.||||++.+....          ......++.+|+.+|+.++||||+++++++
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----------~~~~~~~~~~E~~~l~~~~hpniv~~~~~~   76 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR----------DPSFYLRFRREAQNAAALNHPAIVAVYDTG   76 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTT----------CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhcc----------CHHHHHHHHHHHHHHHhcCCCCCCccccee
Confidence            4699999999999999999999999999999999654321          223466889999999999999999999999


Q ss_pred             ecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           96 STDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        96 ~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ..+.    .+|+|||||+|++|..++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|
T Consensus        77 ~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d  154 (277)
T d1o6ya_          77 EAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD  154 (277)
T ss_dssp             EEECSSSEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECC
T ss_pred             eeccCCCceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeeh
Confidence            7654    4899999999999999876653  499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||++.......                                                     .......+.+||+.||
T Consensus       155 ~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~Gt~~Y~  181 (277)
T d1o6ya_         155 FGIARAIADSG-----------------------------------------------------NSVTQTAAVIGTAQYL  181 (277)
T ss_dssp             CTTCEECC---------------------------------------------------------------------TTC
T ss_pred             hhhhhhhcccc-----------------------------------------------------ccccccccccCccccc
Confidence            99987653211                                                     0112344568999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHhccCCCCCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||++.+..|+.++|||||||++|+|++|++||.+.+..+.+.+++...+..     ...|+.+.+||.+||++||++||
T Consensus       182 aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~  261 (277)
T d1o6ya_         182 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY  261 (277)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCH
Confidence            9999999999999999999999999999999999999988888777554332     35688999999999999999999


Q ss_pred             -ChHHHhcCCC
Q 014344          327 -GVEEIKGHEF  336 (426)
Q Consensus       327 -s~~eil~hp~  336 (426)
                       |+++++ |+|
T Consensus       262 ~sa~~l~-~~l  271 (277)
T d1o6ya_         262 QTAAEMR-ADL  271 (277)
T ss_dssp             SSHHHHH-HHH
T ss_pred             hHHHHHH-HHH
Confidence             566654 444

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-57  Score=425.78  Aligned_cols=258  Identities=20%  Similarity=0.300  Sum_probs=218.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .++++.++|++++.||+|+||+||+|+++ +++.||||++.+..              ...+.+.+|+.+|++++|||||
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~--------------~~~~~~~~E~~~l~~l~HpnIv   71 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS--------------MSPDAFLAEANLMKQLQHQRLV   71 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS--------------SCHHHHHHHHHHHHHCCCTTBC
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc--------------CCHHHHHHHHHHHHhCCCCCEe
Confidence            36778899999999999999999999975 57889999985421              1235688999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++. ++.+|+|||||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+||||+.++.+||
T Consensus        72 ~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl  150 (272)
T d1qpca_          72 RLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI  150 (272)
T ss_dssp             CEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             EEEeeec-cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceee
Confidence            9999875 456799999999999998766554456999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|+.+....                                                       ........||+.
T Consensus       151 ~DFGla~~~~~~~-------------------------------------------------------~~~~~~~~gt~~  175 (272)
T d1qpca_         151 ADFGLARLIEDNE-------------------------------------------------------YTAREGAKFPIK  175 (272)
T ss_dssp             CCCTTCEECSSSC-------------------------------------------------------EECCTTCCCCTT
T ss_pred             ccccceEEccCCc-------------------------------------------------------cccccccCCccc
Confidence            9999998764211                                                       011223468999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||||++.+..|+.++|||||||++|||+| |.+||...+..+....+...  ++.....+..+.+||.+||+.||++||
T Consensus       176 y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rp  255 (272)
T d1qpca_         176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRP  255 (272)
T ss_dssp             TSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCc
Confidence            999999999999999999999999999998 56777777777777776543  333446788999999999999999999


Q ss_pred             ChHHHhc--CCCcC
Q 014344          327 GVEEIKG--HEFFK  338 (426)
Q Consensus       327 s~~eil~--hp~f~  338 (426)
                      |+++|++  |+||+
T Consensus       256 t~~ei~~~L~~~ft  269 (272)
T d1qpca_         256 TFDYLRSVLEDFFT  269 (272)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhhhhh
Confidence            9999998  77874

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-57  Score=419.72  Aligned_cols=251  Identities=21%  Similarity=0.288  Sum_probs=207.5

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ++.++|++++.||+|+||+||+|++. +++.||||++.+..              ...+.+.+|+.+|++++||||++++
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~--------------~~~~~~~~E~~~l~~l~HpnIv~~~   66 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA--------------MSEEDFIEEAEVMMKLSHPKLVQLY   66 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSS--------------SCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCc--------------CcHHHHHHHHHHHHhcCCCCccccc
Confidence            45678999999999999999999985 56789999985421              1235688899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++..++.+|+|||||++|+|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+||
T Consensus        67 g~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DF  145 (263)
T d1sm2a_          67 GVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDF  145 (263)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSC
T ss_pred             ceeccCCceEEEEEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEeccc
Confidence            99999999999999999999999876543 45899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+++......                                                       ........||+.|+|
T Consensus       146 Gla~~~~~~~-------------------------------------------------------~~~~~~~~gt~~y~a  170 (263)
T d1sm2a_         146 GMTRFVLDDQ-------------------------------------------------------YTSSTGTKFPVKWAS  170 (263)
T ss_dssp             C-------------------------------------------------------------------------CTTSCC
T ss_pred             chheeccCCC-------------------------------------------------------ceeecceecCcccCC
Confidence            9997653211                                                       011223469999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||++.+..|+.++|||||||++|||++ |.+||...+..+.+..+...  +..+...++.+.+||.+||+.||++|||++
T Consensus       171 PE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~  250 (263)
T d1sm2a_         171 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFS  250 (263)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHH
Confidence            999999999999999999999999998 67888888887777766543  333445688999999999999999999999


Q ss_pred             HHhcC
Q 014344          330 EIKGH  334 (426)
Q Consensus       330 eil~h  334 (426)
                      ||++|
T Consensus       251 ~il~~  255 (263)
T d1sm2a_         251 RLLRQ  255 (263)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-57  Score=436.62  Aligned_cols=254  Identities=28%  Similarity=0.465  Sum_probs=208.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      -++|+++++||+|+||+||+|+++.+|+.||||++.+...           .....+.+.+|+.+|+.++|||||+++++
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-----------~~~~~~~~~~Ei~il~~l~hpniv~l~~~   85 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-----------SELFAKRAYRELRLLKHMRHENVIGLLDV   85 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-----------SHHHHHHHHHHHHHHHHCCBTTBCCCSEE
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-----------ChHHHHHHHHHHHHHHhcCCCCeeEEEEE
Confidence            3679999999999999999999999999999999964321           22345678899999999999999999999


Q ss_pred             eecCC------eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           95 LSTDK------FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        95 ~~~~~------~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      |...+      .+|+||||| |.+|..+.+.   ..+++..++.++.||+.||+|||++|||||||||+|||++.++.+|
T Consensus        86 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~k  161 (346)
T d1cm8a_          86 FTPDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK  161 (346)
T ss_dssp             ECSCSSTTTCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred             eccCccccccceEEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccc
Confidence            97654      579999999 6788777653   3499999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+|+....                                                           ..+..+||+
T Consensus       162 l~Dfg~a~~~~~-----------------------------------------------------------~~~~~~~t~  182 (346)
T d1cm8a_         162 ILDFGLARQADS-----------------------------------------------------------EMTGYVVTR  182 (346)
T ss_dssp             ECCCTTCEECCS-----------------------------------------------------------SCCSSCSCG
T ss_pred             cccccceeccCC-----------------------------------------------------------ccccccccc
Confidence            999999976531                                                           123457999


Q ss_pred             CCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC------------------------
Q 014344          249 EYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RP------------------------  300 (426)
Q Consensus       249 ~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~~------------------------  300 (426)
                      .|+|||++.+ ..++.++||||+||++|+|++|++||.+.+....+..+..   .+                        
T Consensus       183 ~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (346)
T d1cm8a_         183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE  262 (346)
T ss_dssp             GGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCC
T ss_pred             cccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCccc
Confidence            9999999876 4568999999999999999999999999887665443321   00                        


Q ss_pred             -----CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          301 -----PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       301 -----~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                           ......++.+.+||.+||+.||++|||++|||+||||+.+.+
T Consensus       263 ~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         263 KKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  309 (346)
T ss_dssp             CCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             ccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCC
Confidence                 012345788999999999999999999999999999997653

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-56  Score=415.09  Aligned_cols=251  Identities=20%  Similarity=0.255  Sum_probs=218.4

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      ++.++|+++++||+|+||+||+|+. .+++.||||++.+...              ..+.+.+|+.++++++||||++++
T Consensus         1 ~~~~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~--------------~~~~~~~Ev~~~~~l~HpnIv~~~   65 (258)
T d1k2pa_           1 IDPKDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSM--------------SEDEFIEEAKVMMNLSHEKLVQLY   65 (258)
T ss_dssp             CCCCCCCCCCCCCEETTEEEEEEEE-TTTEEEEEEEEESSSS--------------CHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CChHHCEEeEEEecCCCeEEEEEEE-CCCCEEEEEEECcCcC--------------CHHHHHHHHHHHHhcCCCceeeEE
Confidence            4568999999999999999999998 4788999999864321              234688899999999999999999


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      +++.+++.+++|||||++|+|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        66 g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~Df  144 (258)
T d1k2pa_          66 GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF  144 (258)
T ss_dssp             EEECCSSSEEEEEECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEeeCCceEEEEEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcc
Confidence            99999999999999999999998876554 34899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcc
Q 014344          173 DLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVA  252 (426)
Q Consensus       173 gls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  252 (426)
                      |+++.+....                                                       ........||+.|+|
T Consensus       145 G~a~~~~~~~-------------------------------------------------------~~~~~~~~~t~~y~a  169 (258)
T d1k2pa_         145 GLSRYVLDDE-------------------------------------------------------YTSSVGSKFPVRWSP  169 (258)
T ss_dssp             SSCCBCSSSS-------------------------------------------------------CCCCCCSCCCGGGCC
T ss_pred             hhheeccCCC-------------------------------------------------------ceeecccCCCCCcCC
Confidence            9997654211                                                       011223469999999


Q ss_pred             chhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChH
Q 014344          253 PEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVE  329 (426)
Q Consensus       253 PE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  329 (426)
                      ||++.+..|+.++|||||||++|||++ |+.||.+.+..+...++...  ++.+...+..+.+||.+||+.||++|||++
T Consensus       170 PE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~  249 (258)
T d1k2pa_         170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK  249 (258)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             cHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHH
Confidence            999999999999999999999999998 89999999998888777643  333445678999999999999999999999


Q ss_pred             HHhcC
Q 014344          330 EIKGH  334 (426)
Q Consensus       330 eil~h  334 (426)
                      +|++|
T Consensus       250 eil~~  254 (258)
T d1k2pa_         250 ILLSN  254 (258)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.1e-56  Score=431.51  Aligned_cols=252  Identities=27%  Similarity=0.458  Sum_probs=209.5

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLR   92 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~   92 (426)
                      +.++|+++++||+|+||+||+|+++.+++.||||++.+.                ..+++.+|+.+|+.+. ||||++++
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~----------------~~~~~~~Ei~il~~l~~hpnIv~~~   96 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----------------KKKKIKREIKILENLRGGPNIITLA   96 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS----------------CHHHHHHHHHHHHHHTTSTTBCCEE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH----------------HHHHHHHHHHHHHhccCCCCCcEEE
Confidence            457899999999999999999999999999999998432                2356788999999995 99999999


Q ss_pred             eeeec--CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-cEEE
Q 014344           93 GVLST--DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-HIML  169 (426)
Q Consensus        93 ~~~~~--~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-~ikL  169 (426)
                      ++|..  ...+|+|||||.+++|..+.     +.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus        97 ~~~~~~~~~~~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl  171 (328)
T d3bqca1          97 DIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRL  171 (328)
T ss_dssp             EEEECTTTCSEEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EEEEecCCCceeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeee
Confidence            99974  46799999999999997652     3499999999999999999999999999999999999999765 6999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|......                                                         ......+||+.
T Consensus       172 ~DFG~a~~~~~~---------------------------------------------------------~~~~~~~~t~~  194 (328)
T d3bqca1         172 IDWGLAEFYHPG---------------------------------------------------------QEYNVRVASRY  194 (328)
T ss_dssp             CCGGGCEECCTT---------------------------------------------------------CCCCSCCSCGG
T ss_pred             cccccceeccCC---------------------------------------------------------CcccccccCcc
Confidence            999999865422                                                         12334579999


Q ss_pred             CccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHh---c------------C-------------
Q 014344          250 YVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRIL---C------------R-------------  299 (426)
Q Consensus       250 y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~---~------------~-------------  299 (426)
                      |+|||++.+. .++.++||||+||++|+|++|+.||...... .....+.   .            .             
T Consensus       195 y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (328)
T d3bqca1         195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH  274 (328)
T ss_dssp             GCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCC
T ss_pred             ccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccc
Confidence            9999998875 5799999999999999999999999765432 2211110   0            0             


Q ss_pred             ----------CCCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCChh
Q 014344          300 ----------PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE  343 (426)
Q Consensus       300 ----------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~~  343 (426)
                                .......++++.|||++||++||.+|||++|||+||||+.+.|+
T Consensus       275 ~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         275 SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD  328 (328)
T ss_dssp             CCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCCC
T ss_pred             cccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCCC
Confidence                      00011236779999999999999999999999999999999885

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-56  Score=429.43  Aligned_cols=260  Identities=23%  Similarity=0.315  Sum_probs=209.9

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|+++++||+|+||+||+|++..+|+.||||++.+...           ......++.+|+.+|++++||||++++++
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-----------~~~~~~~~~~E~~il~~l~h~nii~~~~~   77 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-----------KEGFPITALREIKILQLLKHENVVNLIEI   77 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C-----------TTSSCHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-----------chHHHHHHHHHHHHHHHhcCCCccceEee
Confidence            6889999999999999999999999999999999855421           12245678889999999999999999999


Q ss_pred             eec--------CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           95 LST--------DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        95 ~~~--------~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      +..        +..+|+|||||.++++..+.  .....+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus        78 ~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~--~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~  155 (318)
T d3blha1          78 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV  155 (318)
T ss_dssp             EEC----------CEEEEEECCCEEHHHHHT--CTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSC
T ss_pred             eecccccccccCceEEEEEeccCCCccchhh--hcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCc
Confidence            855        45689999999877665442  23456999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||++..+.....                                                    .......+.+|
T Consensus       156 ~kl~dfg~~~~~~~~~~----------------------------------------------------~~~~~~~~~~g  183 (318)
T d3blha1         156 LKLADFGLARAFSLAKN----------------------------------------------------SQPNRYTNRVV  183 (318)
T ss_dssp             EEECCCTTCEECCC---------------------------------------------------------CCCCCSCCS
T ss_pred             EEeeecceeeecccccc----------------------------------------------------cccccccceec
Confidence            99999999976642210                                                    00112334579


Q ss_pred             CCCCccchhhcCC-CCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cCCCCC--C----------------
Q 014344          247 TEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDL--V----------------  304 (426)
Q Consensus       247 t~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~~~--~----------------  304 (426)
                      |+.|+|||++.+. .|+.++||||+||++|||++|++||.+.+.......+.   ..+...  .                
T Consensus       184 T~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (318)
T d3blha1         184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKG  263 (318)
T ss_dssp             CGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSS
T ss_pred             CHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhccccc
Confidence            9999999999865 68999999999999999999999999988877665542   111110  0                


Q ss_pred             ------------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          305 ------------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       305 ------------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                                  ..++.+.|||.+||++||++|||++|+|+||||+.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         264 QKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             CCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             ccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence                        01445789999999999999999999999999963

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-56  Score=421.37  Aligned_cols=258  Identities=20%  Similarity=0.239  Sum_probs=215.5

Q ss_pred             CCCCCcEEEee-ecccCceEEEEEEEcCC--CceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           13 LDFSCLRIVSA-LGRGAKGVVFLVKDVES--SESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        13 l~~~~y~i~~~-LG~G~~g~V~~a~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ++.++|.+... ||+|+||+||+|.++.+  +..||||++.+..            .....+++.+|+++|++++|||||
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~------------~~~~~~~~~~E~~il~~l~HpnIv   72 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT------------EKADTEEMMREAQIMHQLDNPYIV   72 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC------------CHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc------------CHHHHHHHHHHHHHHHhCCCCCEe
Confidence            55577999985 99999999999987643  4579999985431            123456789999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.+ +.+|+|||||+||+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        73 ~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl  150 (285)
T d1u59a_          73 RLIGVCQA-EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKI  150 (285)
T ss_dssp             CEEEEEES-SSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEE
T ss_pred             eEeeeecc-CeEEEEEEeCCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceee
Confidence            99999865 4589999999999999986543 345999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|+.+......                                                     .......+||+.
T Consensus       151 ~DFGla~~~~~~~~~-----------------------------------------------------~~~~~~~~gt~~  177 (285)
T d1u59a_         151 SDFGLSKALGADDSY-----------------------------------------------------YTARSAGKWPLK  177 (285)
T ss_dssp             CCCTTCEECTTCSCE-----------------------------------------------------ECCCCSSCCCGG
T ss_pred             ccchhhhcccccccc-----------------------------------------------------cccccccccCcc
Confidence            999999876432100                                                     011223468999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |||||++.+..++.++|||||||++|||++ |+.||.+.+..+....+...  ++.+...|+.+.+||.+||+.||++||
T Consensus       178 y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RP  257 (285)
T d1u59a_         178 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRP  257 (285)
T ss_dssp             GCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred             ccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCc
Confidence            999999999999999999999999999997 99999998888777776543  344456789999999999999999999


Q ss_pred             ChHHH---hcCCCc
Q 014344          327 GVEEI---KGHEFF  337 (426)
Q Consensus       327 s~~ei---l~hp~f  337 (426)
                      |+.+|   |+|+|+
T Consensus       258 s~~~i~~~L~~~~~  271 (285)
T d1u59a_         258 DFLTVEQRMRACYY  271 (285)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            99888   567776

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-56  Score=432.47  Aligned_cols=250  Identities=30%  Similarity=0.483  Sum_probs=208.0

Q ss_pred             CcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeee
Q 014344           17 CLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLS   96 (426)
Q Consensus        17 ~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~   96 (426)
                      +|+.+++||+|+||+||+|+++.+|+.||||++.+..                 ....+|+.+|++++||||++++++|.
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-----------------~~~~~Ei~il~~l~h~niv~~~~~~~   83 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----------------RFKNRELQIMRKLDHCNIVRLRYFFY   83 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----------------SSCCHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc-----------------hHHHHHHHHHHhcCCCCCCcEEEEEE
Confidence            6999999999999999999999999999999985431                 11235999999999999999999984


Q ss_pred             c------CCeEEEEEeccCCCChHHHHH-HhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCC-cEE
Q 014344           97 T------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENG-HIM  168 (426)
Q Consensus        97 ~------~~~~~lV~Ey~~gg~L~~l~~-~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g-~ik  168 (426)
                      .      ..++|+|||||+++.+..+.. ......+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|
T Consensus        84 ~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~k  163 (350)
T d1q5ka_          84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLK  163 (350)
T ss_dssp             EC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEE
T ss_pred             ecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCcee
Confidence            3      346899999998665554433 23345699999999999999999999999999999999999999775 899


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||++..+...                                                         ....+.+||+
T Consensus       164 l~DFG~a~~~~~~---------------------------------------------------------~~~~~~~gt~  186 (350)
T d1q5ka_         164 LCDFGSAKQLVRG---------------------------------------------------------EPNVSYICSR  186 (350)
T ss_dssp             ECCCTTCEECCTT---------------------------------------------------------SCCCSCCSCT
T ss_pred             EecccchhhccCC---------------------------------------------------------cccccccccc
Confidence            9999998865321                                                         1223457999


Q ss_pred             CCccchhhcC-CCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C------------------------
Q 014344          249 EYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---P------------------------  300 (426)
Q Consensus       249 ~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~---~------------------------  300 (426)
                      .|+|||++.+ ..|+.++||||+||++|||++|++||...+..+++.+++..   +                        
T Consensus       187 ~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (350)
T d1q5ka_         187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP  266 (350)
T ss_dssp             TSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCC
T ss_pred             cccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCc
Confidence            9999999875 56899999999999999999999999998887776655310   0                        


Q ss_pred             ---CCCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          301 ---PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       301 ---~~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                         ......++++.+||.+||++||.+|||+.|+|+||||+++
T Consensus       267 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             GGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence               0112347789999999999999999999999999999754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-56  Score=418.76  Aligned_cols=250  Identities=20%  Similarity=0.276  Sum_probs=207.3

Q ss_pred             eeecccCceEEEEEEEc--CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeeeecCC
Q 014344           22 SALGRGAKGVVFLVKDV--ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDK   99 (426)
Q Consensus        22 ~~LG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~~~~~   99 (426)
                      ++||+|+||+||+|...  .+++.||||++.....           .....+++.+|+.+|++++|||||++++++.++ 
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-----------~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-   80 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-----------DPALKDELLAEANVMQQLDNPYIVRMIGICEAE-   80 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC----------------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-----------CHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-
Confidence            47999999999999864  4567899999854321           123456889999999999999999999999654 


Q ss_pred             eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccccccCC
Q 014344          100 FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS  179 (426)
Q Consensus       100 ~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~  179 (426)
                      ..|+|||||+||+|.+++...  ..+++..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.+.
T Consensus        81 ~~~lvmE~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~  158 (277)
T d1xbba_          81 SWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  158 (277)
T ss_dssp             SEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             CEEEEEEcCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcc
Confidence            578999999999999998754  349999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccchhhcCC
Q 014344          180 PKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGK  259 (426)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  259 (426)
                      ....                                                     .........||+.|||||++.+.
T Consensus       159 ~~~~-----------------------------------------------------~~~~~~~~~gt~~y~APE~l~~~  185 (277)
T d1xbba_         159 ADEN-----------------------------------------------------YYKAQTHGKWPVKWYAPECINYY  185 (277)
T ss_dssp             TTCS-----------------------------------------------------EEEC----CCCGGGCCHHHHHHC
T ss_pred             cccc-----------------------------------------------------ccccccccCCCceecCchhhcCC
Confidence            2210                                                     01122344699999999999999


Q ss_pred             CCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCCChHHH---hc
Q 014344          260 GHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI---KG  333 (426)
Q Consensus       260 ~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ei---l~  333 (426)
                      .|+.++|||||||++|||++ |++||.+.+..+....+...  ++.....|..+.+||.+||+.||++|||+++|   |+
T Consensus       186 ~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~  265 (277)
T d1xbba_         186 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR  265 (277)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             CCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            99999999999999999997 99999999888877776543  33445678999999999999999999999998   46


Q ss_pred             CCCcC
Q 014344          334 HEFFK  338 (426)
Q Consensus       334 hp~f~  338 (426)
                      |+|++
T Consensus       266 ~~~~~  270 (277)
T d1xbba_         266 NYYYD  270 (277)
T ss_dssp             HHHHH
T ss_pred             CHHhh
Confidence            66653

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-55  Score=427.18  Aligned_cols=257  Identities=26%  Similarity=0.402  Sum_probs=208.2

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+..            .....+++.+|+.+|++|+||||+++++++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~------------~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~   75 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE------------HQTYCQRTLREIKILLRFRHENIIGINDII   75 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT------------CHHHHHHHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc------------ChHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence            35999999999999999999999999999999985432            123456788999999999999999999998


Q ss_pred             ecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEec
Q 014344           96 STDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVD  171 (426)
Q Consensus        96 ~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~D  171 (426)
                      ..+.    ..+++++|+.||+|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|
T Consensus        76 ~~~~~~~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~D  152 (345)
T d1pmea_          76 RAPTIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD  152 (345)
T ss_dssp             CCSSTTTCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred             eeccccccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcc
Confidence            6543    234445566699999998653   499999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|........                                                     ........+||+.|+
T Consensus       153 fG~a~~~~~~~~-----------------------------------------------------~~~~~~~~~gt~~y~  179 (345)
T d1pmea_         153 FGLARVADPDHD-----------------------------------------------------HTGFLTEYVATRWYR  179 (345)
T ss_dssp             CTTCEECCGGGC-----------------------------------------------------BCCTTCCCCSCGGGC
T ss_pred             cCceeeccCCCc-----------------------------------------------------cceeeccccccceec
Confidence            999986542210                                                     011234567999999


Q ss_pred             cchhhc-CCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---C--------------------CC------
Q 014344          252 APEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---R--------------------PP------  301 (426)
Q Consensus       252 aPE~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~---~--------------------~~------  301 (426)
                      |||++. +..++.++||||+||++|+|++|++||.+.+...+......   .                    .+      
T Consensus       180 aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (345)
T d1pmea_         180 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP  259 (345)
T ss_dssp             CGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCC
T ss_pred             hHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCC
Confidence            999984 46679999999999999999999999998887655544321   0                    00      


Q ss_pred             ---CCCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          302 ---DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       302 ---~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                         .....++.+++||.+||++||.+|||++|+|+||||+..
T Consensus       260 ~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         260 WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             HHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence               012446789999999999999999999999999999754

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-55  Score=415.66  Aligned_cols=256  Identities=25%  Similarity=0.417  Sum_probs=215.0

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGV   94 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~   94 (426)
                      +++|+++++||+|+||+||+|++..+++.||||++.+..           .......++.+|+.+|+.++||||++++++
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~~~~~~~E~~il~~l~h~niv~~~~~   69 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-----------DDEGVPSSALREICLLKELKHKNIVRLHDV   69 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-----------SSTTHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhh-----------CChHHHHHHHHHHHHHHhcCcCCEEeeccc
Confidence            468999999999999999999999999999999995432           122356788999999999999999999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      +.+....++||+++.|++|..++...  +.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||.
T Consensus        70 ~~~~~~~~iv~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~  147 (292)
T d1unla_          70 LHSDKKLTLVFEFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGL  147 (292)
T ss_dssp             EECSSEEEEEEECCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred             cccccceeEEeeeccccccccccccc--cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecch
Confidence            99999999999999999998876543  4589999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      |.......                                                        .......+++.|+|||
T Consensus       148 a~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~~pe  171 (292)
T d1unla_         148 ARAFGIPV--------------------------------------------------------RCYSAEVVTLWYRPPD  171 (292)
T ss_dssp             CEECCSCC--------------------------------------------------------SCCCSCCSCGGGCCHH
T ss_pred             hhcccCCC--------------------------------------------------------ccceeeccccchhhhh
Confidence            98764221                                                        1122335788899999


Q ss_pred             hhcCCC-CChhhHHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHh---cCC---------------------------CC
Q 014344          255 IIEGKG-HDFAVDWWSLGVVLHEMLYGATPF-RGSSRKETFYRIL---CRP---------------------------PD  302 (426)
Q Consensus       255 ~~~~~~-~~~~~DiwSlG~il~ell~g~~pf-~~~~~~~~~~~i~---~~~---------------------------~~  302 (426)
                      ++.+.. ++.++||||+||++|||++|+.|| .+.+..+.+.++.   ..+                           ..
T Consensus       172 ~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (292)
T d1unla_         172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV  251 (292)
T ss_dssp             HHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTT
T ss_pred             HhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhc
Confidence            988765 699999999999999999999885 4555555555432   110                           01


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCC
Q 014344          303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG  339 (426)
Q Consensus       303 ~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~  339 (426)
                      ....++.+.+||++||++||.+|||++|||+||||++
T Consensus       252 ~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             STTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence            1233677999999999999999999999999999986

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-56  Score=415.46  Aligned_cols=259  Identities=22%  Similarity=0.322  Sum_probs=216.0

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .++++.++|++++.||+|+||+||+|++..+ +.||||++.....              ..+.+.+|+.+|++++|||||
T Consensus        11 ~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~--------------~~~~~~~E~~~l~~l~h~nIv   75 (285)
T d1fmka3          11 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM--------------SPEAFLQEAQVMKKLRHEKLV   75 (285)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS--------------CHHHHHHHHHHHHHCCCTTBC
T ss_pred             ceEcCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC--------------CHHHHHHHHHHHHhcccCCEe
Confidence            4678889999999999999999999998655 5799999854321              235688999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.+ +.+|+|||||++|+|..++.....+.+++..+..++.||+.||+|||++||+||||||+||||+.++.+||
T Consensus        76 ~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl  154 (285)
T d1fmka3          76 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV  154 (285)
T ss_dssp             CEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEEEEec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEE
Confidence            99999854 56799999999999998877665566999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|+.+....                                                       ........||+.
T Consensus       155 ~DfGla~~~~~~~-------------------------------------------------------~~~~~~~~gt~~  179 (285)
T d1fmka3         155 ADFGLARLIEDNE-------------------------------------------------------YTARQGAKFPIK  179 (285)
T ss_dssp             CCCCTTC---------------------------------------------------------------------CCGG
T ss_pred             cccchhhhccCCC-------------------------------------------------------ceeecccccccc
Confidence            9999997653211                                                       011233469999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTKRI  326 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~  326 (426)
                      |+|||++.+..++.++|||||||++|||++ |.+|+.+....+.+..+...  ++.....+..+++||.+||+.||++||
T Consensus       180 y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  259 (285)
T d1fmka3         180 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERP  259 (285)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCc
Confidence            999999999999999999999999999998 56667777777777766533  344556789999999999999999999


Q ss_pred             ChHHHhc--CCCcCC
Q 014344          327 GVEEIKG--HEFFKG  339 (426)
Q Consensus       327 s~~eil~--hp~f~~  339 (426)
                      |+++|++  |+||+.
T Consensus       260 s~~~i~~~L~~~~~~  274 (285)
T d1fmka3         260 TFEYLQAFLEDYFTS  274 (285)
T ss_dssp             CHHHHHHHHHTTTSC
T ss_pred             CHHHHHHHHhhhhcC
Confidence            9999988  888864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-55  Score=412.84  Aligned_cols=255  Identities=24%  Similarity=0.353  Sum_probs=208.3

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCC---ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESS---ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~---~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      ++++.++|++++.||+|+||+||+|++..++   ..||||++....            .......+.+|+.+|++++|||
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~------------~~~~~~~~~~E~~~l~~l~Hpn   69 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT------------SDSVREKFLQEALTMRQFDHPH   69 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT------------SHHHHHHHHHHHHHHHTCCCTT
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc------------CHHHHHHHHHHHHHHHhCCCCC
Confidence            5677789999999999999999999987554   458888874321            2234567889999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      |+++++++. ++.+|+|||||++|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        70 Iv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~  147 (273)
T d1mp8a_          70 IVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV  147 (273)
T ss_dssp             BCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE
T ss_pred             EeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcE
Confidence            999999995 567899999999999999876543 459999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||+|+.+....                                                       ........||
T Consensus       148 Kl~DfG~a~~~~~~~-------------------------------------------------------~~~~~~~~gt  172 (273)
T d1mp8a_         148 KLGDFGLSRYMEDST-------------------------------------------------------YYKASKGKLP  172 (273)
T ss_dssp             EECC--------------------------------------------------------------------------CC
T ss_pred             EEccchhheeccCCc-------------------------------------------------------ceeccceecC
Confidence            999999998654211                                                       1122344689


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.|+|||++.+..|+.++|||||||++|||++ |.+||.+.+..+.+.++...  ++.....|..+.+||.+||..||++
T Consensus       173 ~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  252 (273)
T d1mp8a_         173 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR  252 (273)
T ss_dssp             GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhH
Confidence            99999999999999999999999999999997 89999999988888777643  3445577899999999999999999


Q ss_pred             CCChHHHhcC
Q 014344          325 RIGVEEIKGH  334 (426)
Q Consensus       325 R~s~~eil~h  334 (426)
                      |||++||++|
T Consensus       253 Rps~~ei~~~  262 (273)
T d1mp8a_         253 RPRFTELKAQ  262 (273)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999976

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-55  Score=428.27  Aligned_cols=254  Identities=24%  Similarity=0.388  Sum_probs=202.9

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|+++++||+|+||+||+|+++.+|+.||||++.+...           +.....++.+|+.+|++++||||++++++|
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-----------~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f   85 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-----------NQTHAKRAYRELVLMKCVNHKNIISLLNVF   85 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-----------SHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-----------CHHHHHHHHHHHHHHHhcCCCCeeEEEEEE
Confidence            579999999999999999999999999999999965432           223456788999999999999999999999


Q ss_pred             e------cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           96 S------TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        96 ~------~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      .      +...+|+|||||.|+.+. .+.    ..+++..++.+++||+.||+|||++||+||||||+|||++.++.+|+
T Consensus        86 ~~~~~~~~~~~~~iv~Ey~~~~l~~-~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl  160 (355)
T d2b1pa1          86 TPQKTLEEFQDVYLVMELMDANLCQ-VIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI  160 (355)
T ss_dssp             CSCCSTTTCCEEEEEEECCSEEHHH-HHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred             ecccccccCceeEEEEeccchHHHH-hhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceee
Confidence            5      347899999999765444 332    34999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.....                                                         ......+||+.
T Consensus       161 ~df~~~~~~~~~---------------------------------------------------------~~~~~~~~t~~  183 (355)
T d2b1pa1         161 LDFGLARTAGTS---------------------------------------------------------FMMTPYVVTRY  183 (355)
T ss_dssp             CCCCC------------------------------------------------------------------------CCT
T ss_pred             echhhhhccccc---------------------------------------------------------ccccccccccc
Confidence            999998765321                                                         12345579999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----------------------CCCCCC---
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC----------------------RPPDLV---  304 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~----------------------~~~~~~---  304 (426)
                      |+|||++.+..++.++||||+||++|+|++|++||.+.+......+++.                      ......   
T Consensus       184 y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (355)
T d2b1pa1         184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT  263 (355)
T ss_dssp             TCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCC
T ss_pred             ccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccc
Confidence            9999999999999999999999999999999999998887666544421                      100000   


Q ss_pred             ------------------CCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCCh
Q 014344          305 ------------------GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNW  342 (426)
Q Consensus       305 ------------------~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~~  342 (426)
                                        ..++++.+||++||.+||++||||+|||+||||+...+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~  319 (355)
T d2b1pa1         264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD  319 (355)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCCC
Confidence                              01345889999999999999999999999999987433

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-54  Score=407.23  Aligned_cols=257  Identities=23%  Similarity=0.294  Sum_probs=208.8

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcCCC----ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESS----ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~----~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      .+++.++|++.+.||+|+||+||+|..+.++    ..||||++....            .......+.+|+.+|++++||
T Consensus         2 ~ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~------------~~~~~~~~~~E~~il~~l~H~   69 (283)
T d1mqba_           2 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY------------TEKQRVDFLGEAGIMGQFSHH   69 (283)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC------------CHHHHHHHHHHHHHHHTCCCT
T ss_pred             CcCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc------------ChHHHHHHHHHHHHHHhcCCC
Confidence            4677789999999999999999999987654    369999985432            112345688999999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGH  166 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~  166 (426)
                      |||++++++.+...+++|||||.++++.+++.... ..+++..+..++.||+.||+|||++||+||||||+||||+.++.
T Consensus        70 nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~  148 (283)
T d1mqba_          70 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV  148 (283)
T ss_dssp             TBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC
T ss_pred             CEeeeeEEEecCCceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCe
Confidence            99999999999999999999999999998876543 45999999999999999999999999999999999999999999


Q ss_pred             EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014344          167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVG  246 (426)
Q Consensus       167 ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  246 (426)
                      +||+|||+|+.+.....                                                     .........|
T Consensus       149 ~Kl~DFGla~~~~~~~~-----------------------------------------------------~~~~~~~~~g  175 (283)
T d1mqba_         149 CKVSDFGLSRVLEDDPE-----------------------------------------------------ATYTTSGGKI  175 (283)
T ss_dssp             EEECCCCC----------------------------------------------------------------------CC
T ss_pred             EEEcccchhhcccCCCc-----------------------------------------------------cceEeccCCC
Confidence            99999999987642210                                                     0111223458


Q ss_pred             CCCCccchhhcCCCCChhhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCC
Q 014344          247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYG-ATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPT  323 (426)
Q Consensus       247 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~  323 (426)
                      |+.|||||++.+..++.++|||||||++|||++| .+||.+.+..+.+..+..  .++.....+..+.+||.+||..||+
T Consensus       176 t~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~  255 (283)
T d1mqba_         176 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA  255 (283)
T ss_dssp             CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTT
T ss_pred             CccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHh
Confidence            9999999999999999999999999999999984 566666777766666543  3344456788999999999999999


Q ss_pred             CCCChHHHhc
Q 014344          324 KRIGVEEIKG  333 (426)
Q Consensus       324 ~R~s~~eil~  333 (426)
                      +|||+.||++
T Consensus       256 ~RPt~~eil~  265 (283)
T d1mqba_         256 RRPKFADIVS  265 (283)
T ss_dssp             TSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-55  Score=427.75  Aligned_cols=252  Identities=27%  Similarity=0.427  Sum_probs=209.7

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++|+++++||+|+||+||+|+++.+|+.||||++.+...           .....+++.+|+.+|+.++||||++++++|
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----------~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~   86 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----------SIIHAKRTYRELRLLKHMKHENVIGLLDVF   86 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-----------SHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-----------ChHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            679999999999999999999999999999999965321           223456788999999999999999999998


Q ss_pred             ecC-----CeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEe
Q 014344           96 STD-----KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLV  170 (426)
Q Consensus        96 ~~~-----~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~  170 (426)
                      ...     ...+++|+|+.||+|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+|++
T Consensus        87 ~~~~~~~~~~~~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~  163 (348)
T d2gfsa1          87 TPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL  163 (348)
T ss_dssp             CSCSSTTTCCCCEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             eeccccccCceEEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccccccc
Confidence            633     344666777889999998753   359999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q 014344          171 DFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEY  250 (426)
Q Consensus       171 DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  250 (426)
                      |||++....                                                           ....+.+||+.|
T Consensus       164 dfg~a~~~~-----------------------------------------------------------~~~~~~~g~~~y  184 (348)
T d2gfsa1         164 DFGLARHTD-----------------------------------------------------------DEMTGYVATRWY  184 (348)
T ss_dssp             CC----CCT-----------------------------------------------------------GGGSSSCHHHHT
T ss_pred             ccchhcccC-----------------------------------------------------------cccccccccccc
Confidence            999986542                                                           122345699999


Q ss_pred             ccchhhcCCC-CChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----------------------C----
Q 014344          251 VAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP-----------------------D----  302 (426)
Q Consensus       251 ~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----------------------~----  302 (426)
                      +|||++.+.. ++.++|||||||++|+|++|++||.+.+.......++....                       .    
T Consensus       185 ~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (348)
T d2gfsa1         185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM  264 (348)
T ss_dssp             SCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC
T ss_pred             cCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc
Confidence            9999977754 68999999999999999999999999887776655531100                       0    


Q ss_pred             -----CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCC
Q 014344          303 -----LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV  340 (426)
Q Consensus       303 -----~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~  340 (426)
                           ..+.++.++|||.+||+.||.+|||++|||+||||+..
T Consensus       265 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             CHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             chhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence                 12457889999999999999999999999999999864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-55  Score=406.09  Aligned_cols=249  Identities=21%  Similarity=0.342  Sum_probs=210.3

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      .|+++.++|++++.||+|+||.||+|+.  .|+.||||++.++               ...+.+.+|+++|++++||||+
T Consensus         1 ~w~i~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~---------------~~~~~~~~E~~~l~~l~HpnIv   63 (262)
T d1byga_           1 GWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND---------------ATAQAFLAEASVMTQLRHSNLV   63 (262)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC---------------C--HHHHHTHHHHTTCCCTTBC
T ss_pred             CCccCHHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcH---------------HHHHHHHHHHHHHHhCCCCCEe
Confidence            3788999999999999999999999997  4778999998432               1335688899999999999999


Q ss_pred             eeeeeee-cCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEE
Q 014344           90 RLRGVLS-TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIM  168 (426)
Q Consensus        90 ~l~~~~~-~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ik  168 (426)
                      ++++++. .++.+|+|||||++|+|.+++.......+++..++.++.||+.||.|||+.+|+||||||+|||++.+|.+|
T Consensus        64 ~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~k  143 (262)
T d1byga_          64 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAK  143 (262)
T ss_dssp             CEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred             eEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEe
Confidence            9999884 456789999999999999998765555699999999999999999999999999999999999999999999


Q ss_pred             EecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 014344          169 LVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTE  248 (426)
Q Consensus       169 L~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  248 (426)
                      |+|||+++....                                                           ......+|+
T Consensus       144 l~dfg~s~~~~~-----------------------------------------------------------~~~~~~~~~  164 (262)
T d1byga_         144 VSDFGLTKEASS-----------------------------------------------------------TQDTGKLPV  164 (262)
T ss_dssp             ECCCCC-----------------------------------------------------------------------CCT
T ss_pred             ecccccceecCC-----------------------------------------------------------CCccccccc
Confidence            999999876432                                                           122335889


Q ss_pred             CCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       249 ~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      .|+|||++.+..++.++|||||||++|||++ |++||...+..+....+..  .++.....++.+.+||.+||..||.+|
T Consensus       165 ~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R  244 (262)
T d1byga_         165 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR  244 (262)
T ss_dssp             TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHC
Confidence            9999999999999999999999999999998 8999999888887777753  344455678999999999999999999


Q ss_pred             CChHHHhcC
Q 014344          326 IGVEEIKGH  334 (426)
Q Consensus       326 ~s~~eil~h  334 (426)
                      ||+.+|+++
T Consensus       245 ps~~~l~~~  253 (262)
T d1byga_         245 PSFLQLREQ  253 (262)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-54  Score=413.01  Aligned_cols=255  Identities=20%  Similarity=0.265  Sum_probs=208.4

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcCCCce----EEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVESSES----FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL   87 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~----vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~   87 (426)
                      -++-++|++++.||+|+||+||+|++..+|+.    ||+|.+....            .....+.+.+|+.+|++++|||
T Consensus         5 ~~k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~Hpn   72 (317)
T d1xkka_           5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT------------SPKANKEILDEAYVMASVDNPH   72 (317)
T ss_dssp             ECCTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----------------CTHHHHHHHHHHHHHCCCTT
T ss_pred             cCCHHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc------------CHHHHHHHHHHHHHHHhCCCCC
Confidence            45667899999999999999999999888874    6666663221            1224567899999999999999


Q ss_pred             cceeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcE
Q 014344           88 LPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHI  167 (426)
Q Consensus        88 iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~i  167 (426)
                      ||++++++.++ ..+++||||.+|+|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++.++++
T Consensus        73 Iv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~  150 (317)
T d1xkka_          73 VCRLLGICLTS-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV  150 (317)
T ss_dssp             BCCEEEEEESS-SEEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEE
T ss_pred             EeeEEEEEecC-CeeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCe
Confidence            99999999765 5678899999999998876653 459999999999999999999999999999999999999999999


Q ss_pred             EEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 014344          168 MLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGT  247 (426)
Q Consensus       168 kL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  247 (426)
                      ||+|||+|+.+.....                                                      .......+||
T Consensus       151 kl~DFGla~~~~~~~~------------------------------------------------------~~~~~~~~gt  176 (317)
T d1xkka_         151 KITDFGLAKLLGAEEK------------------------------------------------------EYHAEGGKVP  176 (317)
T ss_dssp             EECCCSHHHHTTTTCC--------------------------------------------------------------CC
T ss_pred             Eeeccccceecccccc------------------------------------------------------cccccccccC
Confidence            9999999987643210                                                      1122334689


Q ss_pred             CCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCC
Q 014344          248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTK  324 (426)
Q Consensus       248 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~  324 (426)
                      +.|||||++.+..|+.++|||||||++|||+| |.+||.+.+..+....+..  .++.....+..+.+||.+||..||.+
T Consensus       177 ~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~  256 (317)
T d1xkka_         177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS  256 (317)
T ss_dssp             TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGG
T ss_pred             ccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhh
Confidence            99999999999999999999999999999998 8999998887766655543  23444567899999999999999999


Q ss_pred             CCChHHHhcC
Q 014344          325 RIGVEEIKGH  334 (426)
Q Consensus       325 R~s~~eil~h  334 (426)
                      |||+.||+.|
T Consensus       257 RPs~~eil~~  266 (317)
T d1xkka_         257 RPKFRELIIE  266 (317)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999988

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-54  Score=409.49  Aligned_cols=258  Identities=21%  Similarity=0.324  Sum_probs=204.4

Q ss_pred             CCCCCCCcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-C
Q 014344           11 RSLDFSCLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-E   84 (426)
Q Consensus        11 ~~l~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~   84 (426)
                      ++++.++|++++.||+|+||+||+|++..     +++.||||++.....            ....+.+..|..++.++ .
T Consensus         8 wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~------------~~~~~~~~~e~~~l~~~~~   75 (299)
T d1ywna1           8 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------------HSEHRALMSELKILIHIGH   75 (299)
T ss_dssp             HBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C------------HHHHHHHHHHHHHHHHHCC
T ss_pred             ccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC------------cHHHHHHHHHHHHHHhhcC
Confidence            45777899999999999999999999754     456899999854321            12345677788888777 5


Q ss_pred             CCCcceeeeeeec-CCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014344           85 HPLLPRLRGVLST-DKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHNMGI  149 (426)
Q Consensus        85 hp~iv~l~~~~~~-~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~~gi  149 (426)
                      |+||+.+++++.. +..+++|||||+||+|.++++...              ...+++..+..++.||+.||+|||++||
T Consensus        76 h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i  155 (299)
T d1ywna1          76 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC  155 (299)
T ss_dssp             CTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            8999999998755 457899999999999999987543              2348899999999999999999999999


Q ss_pred             cccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCC
Q 014344          150 VYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDP  229 (426)
Q Consensus       150 iHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (426)
                      |||||||+||||+.++++||+|||+|+......                                               
T Consensus       156 vHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~-----------------------------------------------  188 (299)
T d1ywna1         156 IHRDLAARNILLSEKNVVKICDFGLARDIYKDP-----------------------------------------------  188 (299)
T ss_dssp             CCSCCCGGGEEECGGGCEEECC------CCSCT-----------------------------------------------
T ss_pred             cCCcCCccceeECCCCcEEEccCcchhhccccc-----------------------------------------------
Confidence            999999999999999999999999998653221                                               


Q ss_pred             CCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhc---CCCCCCC
Q 014344          230 PSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYG-ATPFRGSSRKETFYRILC---RPPDLVG  305 (426)
Q Consensus       230 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~---~~~~~~~  305 (426)
                             ......+.+||+.|||||++.+..++.++|||||||++|||++| .+||.+.+..+.+..++.   .++....
T Consensus       189 -------~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  261 (299)
T d1ywna1         189 -------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY  261 (299)
T ss_dssp             -------TSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTT
T ss_pred             -------cccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCcc
Confidence                   11123456799999999999999999999999999999999986 678988765555544432   2333445


Q ss_pred             CCHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          306 EPTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       306 ~~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      .++.+.+||.+||+.||++|||++||++|
T Consensus       262 ~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         262 TTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            68899999999999999999999999987

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-54  Score=403.25  Aligned_cols=256  Identities=22%  Similarity=0.306  Sum_probs=206.3

Q ss_pred             CCCCCcEEEeeecccCceEEEEEEEcCC-C--ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc
Q 014344           13 LDFSCLRIVSALGRGAKGVVFLVKDVES-S--ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP   89 (426)
Q Consensus        13 l~~~~y~i~~~LG~G~~g~V~~a~~~~~-~--~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv   89 (426)
                      ++.++|++++.||+|+||.||+|+...+ +  ..||||++.+.....          ....+++.+|+.+|++++||||+
T Consensus         5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~----------~~~~~~~~~Ei~~l~~l~H~nIv   74 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ----------PEAMDDFIREVNAMHSLDHRNLI   74 (273)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC------------------CHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             EchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCC----------HHHHHHHHHHHHHHHhCCCCCEE
Confidence            4567899999999999999999986533 3  368999986544322          23457899999999999999999


Q ss_pred             eeeeeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEE
Q 014344           90 RLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIML  169 (426)
Q Consensus        90 ~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL  169 (426)
                      ++++++.+ ..+++|||||++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        75 ~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl  152 (273)
T d1u46a_          75 RLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKI  152 (273)
T ss_dssp             CEEEEECS-SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEE
T ss_pred             EEEEEEee-cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceee
Confidence            99999965 46789999999999998776554 34999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+++.+.....                                                     .........||+.
T Consensus       153 ~DfGl~~~~~~~~~-----------------------------------------------------~~~~~~~~~~~~~  179 (273)
T d1u46a_         153 GDFGLMRALPQNDD-----------------------------------------------------HYVMQEHRKVPFA  179 (273)
T ss_dssp             CCCTTCEECCC-CC-----------------------------------------------------EEEC-----CCGG
T ss_pred             ccchhhhhcccCCC-----------------------------------------------------cceecCccccCcc
Confidence            99999987643211                                                     0112234458889


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC---CCCCCCCHHHHHHHHHHhccCCCCC
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCRP---PDLVGEPTPLRNLIRRLLEKDPTKR  325 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~li~~~L~~dP~~R  325 (426)
                      |+|||++.+..++.++|||||||++|||++ |+.||.+.+..+...++....   +.....|..+.+||.+||..||++|
T Consensus       180 ~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  259 (273)
T d1u46a_         180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR  259 (273)
T ss_dssp             GCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHC
Confidence            999999999999999999999999999997 899999999999888876443   3345678999999999999999999


Q ss_pred             CChHHHhc
Q 014344          326 IGVEEIKG  333 (426)
Q Consensus       326 ~s~~eil~  333 (426)
                      ||+.+|++
T Consensus       260 Pt~~ei~~  267 (273)
T d1u46a_         260 PTFVALRD  267 (273)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999863

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-53  Score=403.95  Aligned_cols=259  Identities=21%  Similarity=0.314  Sum_probs=215.9

Q ss_pred             CCCCCCCCCcEEEeeecccCceEEEEEEEcCCC-------ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHH
Q 014344            9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESS-------ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR   81 (426)
Q Consensus         9 ~~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~   81 (426)
                      +.+++..++|++++.||+|+||.||+|++..++       ..||||++.+...            ......+..|..++.
T Consensus         6 ~~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~------------~~~~~~~~~e~~~l~   73 (299)
T d1fgka_           6 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------------EKDLSDLISEMEMMK   73 (299)
T ss_dssp             TTTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC------------HHHHHHHHHHHHHHH
T ss_pred             CcCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC------------hHHHHHHHHHHHHHH
Confidence            457788899999999999999999999986554       3699999855321            223567888988998


Q ss_pred             hc-CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------------cCCCCHHHHHHHHHHHHHHHHHHHH
Q 014344           82 NV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------------EQMFSDDTIRFYAAELVLALEYLHN  146 (426)
Q Consensus        82 ~l-~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------------~~~l~~~~~~~~~~qil~aL~~LH~  146 (426)
                      ++ +|||||++++++.++..+|+|||||++|+|.+++....              ...+++..+..++.||+.||+|||+
T Consensus        74 ~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~  153 (299)
T d1fgka_          74 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS  153 (299)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh
Confidence            88 79999999999999999999999999999999987543              2458999999999999999999999


Q ss_pred             CCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCC
Q 014344          147 MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIG  226 (426)
Q Consensus       147 ~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (426)
                      +|||||||||+|||++.++.+||+|||+++......                                            
T Consensus       154 ~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~--------------------------------------------  189 (299)
T d1fgka_         154 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID--------------------------------------------  189 (299)
T ss_dssp             TTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCC--------------------------------------------
T ss_pred             CCEEeeeecccceeecCCCCeEeccchhhccccccc--------------------------------------------
Confidence            999999999999999999999999999998664211                                            


Q ss_pred             CCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCC
Q 014344          227 PDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILCR--PPDL  303 (426)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~  303 (426)
                                ........+||+.|+|||++.+..|+.++|||||||++|||++ |.+||.+.+..+.+..+...  ++..
T Consensus       190 ----------~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p  259 (299)
T d1fgka_         190 ----------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP  259 (299)
T ss_dssp             ----------TTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred             ----------cccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence                      1123345579999999999999999999999999999999997 79999998888777666533  3334


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ...++.+.+||.+||+.||++|||+.||++
T Consensus       260 ~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         260 SNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             SSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            466899999999999999999999999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.5e-53  Score=403.05  Aligned_cols=256  Identities=23%  Similarity=0.291  Sum_probs=216.2

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCC
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP   86 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp   86 (426)
                      ++..++|++++.||+|+||+||+|+.+     .+++.||||++....            .....+++.+|+.+|++++||
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~------------~~~~~~~~~~E~~il~~l~h~   76 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA------------SADMQADFQREAALMAEFDNP   76 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC------------CHHHHHHHHHHHHHHHTCCCT
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc------------ChHHHHHHHHHHHHHHhcCCC
Confidence            345678999999999999999999975     356789999985432            123456789999999999999


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc----------------------cCCCCHHHHHHHHHHHHHHHHHH
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS----------------------EQMFSDDTIRFYAAELVLALEYL  144 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~----------------------~~~l~~~~~~~~~~qil~aL~~L  144 (426)
                      ||+++++++.....+++|||||.+|+|.+++....                      ...++...+..++.||+.||+||
T Consensus        77 niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yl  156 (301)
T d1lufa_          77 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL  156 (301)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999886432                      22488999999999999999999


Q ss_pred             HHCCCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCC
Q 014344          145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPR  224 (426)
Q Consensus       145 H~~giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (426)
                      |++|||||||||+|||++.++.+||+|||+|+.+....                                          
T Consensus       157 H~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~------------------------------------------  194 (301)
T d1lufa_         157 SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD------------------------------------------  194 (301)
T ss_dssp             HHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG------------------------------------------
T ss_pred             ccCCeEeeEEcccceEECCCCcEEEccchhheeccCCc------------------------------------------
Confidence            99999999999999999999999999999997653211                                          


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCC--C
Q 014344          225 IGPDPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYG-ATPFRGSSRKETFYRILCRP--P  301 (426)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~~--~  301 (426)
                                  ......+.+||+.|+|||++.+..|+.++|||||||++|||++| .+||.+.+..+....+....  +
T Consensus       195 ------------~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~  262 (301)
T d1lufa_         195 ------------YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA  262 (301)
T ss_dssp             ------------CBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred             ------------cccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC
Confidence                        01123455699999999999999999999999999999999998 47899999888887776443  3


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       302 ~~~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      .....++.+.+||.+||+.||++|||+.||++
T Consensus       263 ~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         263 CPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            34467899999999999999999999999965

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-53  Score=405.60  Aligned_cols=256  Identities=23%  Similarity=0.313  Sum_probs=216.8

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcCCCce--EEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-CCC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSES--FALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHP   86 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~--vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp   86 (426)
                      .+.+++++|++.++||+|+||+||+|+++.++..  ||||.+....            .....+.+.+|+++|+++ +||
T Consensus         4 ~~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~E~~~l~~l~~Hp   71 (309)
T d1fvra_           4 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA------------SKDDHRDFAGELEVLCKLGHHP   71 (309)
T ss_dssp             SSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------CHHHHHHHHHTTCCCCT
T ss_pred             CCccCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc------------ChHHHHHHHHHHHHHHhccCCC
Confidence            4568899999999999999999999999988875  6677663221            112346789999999998 699


Q ss_pred             CcceeeeeeecCCeEEEEEeccCCCChHHHHHHh--------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 014344           87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ--------------SEQMFSDDTIRFYAAELVLALEYLHNMGIVYR  152 (426)
Q Consensus        87 ~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~--------------~~~~l~~~~~~~~~~qil~aL~~LH~~giiHr  152 (426)
                      ||+++++++.+++.+|+|||||+||+|.++++..              ....+++..+..++.||+.||.|||++||+||
T Consensus        72 nIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHr  151 (309)
T d1fvra_          72 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR  151 (309)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             CEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence            9999999999999999999999999999998643              23569999999999999999999999999999


Q ss_pred             CCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCC
Q 014344          153 DLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSR  232 (426)
Q Consensus       153 DlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (426)
                      ||||+|||++.++.+||+|||+|+.....                                                   
T Consensus       152 Dlkp~NIL~~~~~~~kl~DfG~a~~~~~~---------------------------------------------------  180 (309)
T d1fvra_         152 DLAARNILVGENYVAKIADFGLSRGQEVY---------------------------------------------------  180 (309)
T ss_dssp             CCSGGGEEECGGGCEEECCTTCEESSCEE---------------------------------------------------
T ss_pred             ccccceEEEcCCCceEEcccccccccccc---------------------------------------------------
Confidence            99999999999999999999999765321                                                   


Q ss_pred             CCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhc--CCCCCCCCCHH
Q 014344          233 SDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYG-ATPFRGSSRKETFYRILC--RPPDLVGEPTP  309 (426)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~  309 (426)
                            .......||+.|+|||.+.+..|+.++|||||||++|||++| .+||.+.+..+.+..+..  .++.....++.
T Consensus       181 ------~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~  254 (309)
T d1fvra_         181 ------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDE  254 (309)
T ss_dssp             ------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHH
T ss_pred             ------ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHH
Confidence                  112344689999999999999999999999999999999996 568998888888877764  33444567899


Q ss_pred             HHHHHHHHhccCCCCCCChHHHhcC
Q 014344          310 LRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       310 ~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +.+||.+||+.||++|||++||++|
T Consensus       255 ~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         255 VYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999999999999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-53  Score=402.58  Aligned_cols=263  Identities=21%  Similarity=0.232  Sum_probs=222.6

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEcC-----CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVE-----SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      .++++.++|++++.||+|+||+||+|.+..     ++..||||++.+..            .......+.+|+.++++++
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~------------~~~~~~~~~~E~~il~~l~   81 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA------------SMRERIEFLNEASVMKEFN   81 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS------------CHHHHHHHHHHHHHGGGCC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc------------ChHHHHHHHHHHHHHHHcC
Confidence            467888999999999999999999998853     35789999985432            1123457889999999999


Q ss_pred             CCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc--------cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Q 014344           85 HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS--------EQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKP  156 (426)
Q Consensus        85 hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~--------~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp  156 (426)
                      ||||+++++++..+..+++|||||++|+|.+++....        ...++...+..++.|++.||.|||+++|+||||||
T Consensus        82 h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~  161 (308)
T d1p4oa_          82 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAA  161 (308)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSG
T ss_pred             CCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcC
Confidence            9999999999999999999999999999999876432        12468899999999999999999999999999999


Q ss_pred             CCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          157 ENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSD  236 (426)
Q Consensus       157 ~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (426)
                      +|||++.++++||+|||+|+.+....                                                      
T Consensus       162 ~NiLld~~~~~Kl~DFGla~~~~~~~------------------------------------------------------  187 (308)
T d1p4oa_         162 RNCMVAEDFTVKIGDFGMTRDIYETD------------------------------------------------------  187 (308)
T ss_dssp             GGEEECTTCCEEECCTTCCCGGGGGG------------------------------------------------------
T ss_pred             CceeecCCceEEEeecccceeccCCc------------------------------------------------------
Confidence            99999999999999999997653211                                                      


Q ss_pred             CCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcC--CCCCCCCCHHHHHH
Q 014344          237 SSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYG-ATPFRGSSRKETFYRILCR--PPDLVGEPTPLRNL  313 (426)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~l  313 (426)
                      ........+||+.|+|||.+.+..++.++|||||||++|||++| .+||.+.+..+.+..+...  ++.....+..+.+|
T Consensus       188 ~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l  267 (308)
T d1p4oa_         188 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL  267 (308)
T ss_dssp             CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHH
Confidence            01123345699999999999999999999999999999999998 5899999998888877643  23344668899999


Q ss_pred             HHHHhccCCCCCCChHHHhc------CCCcC
Q 014344          314 IRRLLEKDPTKRIGVEEIKG------HEFFK  338 (426)
Q Consensus       314 i~~~L~~dP~~R~s~~eil~------hp~f~  338 (426)
                      |.+||+.||++|||+++|++      +|+|+
T Consensus       268 i~~cl~~~P~~RPs~~~il~~L~~~~~~~~~  298 (308)
T d1p4oa_         268 MRMCWQYNPKMRPSFLEIISSIKEEMEPGFR  298 (308)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHhcCCCCc
Confidence            99999999999999999987      56654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-52  Score=398.28  Aligned_cols=258  Identities=20%  Similarity=0.313  Sum_probs=217.1

Q ss_pred             CCCCCCCCcEEEeeecccCceEEEEEEEc-----CCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhc-
Q 014344           10 IRSLDFSCLRIVSALGRGAKGVVFLVKDV-----ESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-   83 (426)
Q Consensus        10 ~~~l~~~~y~i~~~LG~G~~g~V~~a~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-   83 (426)
                      .|++..++|++++.||+|+||.||+|+..     .+++.||||++.+..            .......+.+|+.+++.+ 
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~------------~~~~~~~~~~E~~~~~~l~   84 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA------------HLTEREALMSELKVLSYLG   84 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC------------CHHHHHHHHHHHHHHHHHC
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc------------CHHHHHHHHHHHHHHHhcc
Confidence            35677899999999999999999999863     466789999995432            123455788999999999 


Q ss_pred             CCCCcceeeeeeecCCeEEEEEeccCCCChHHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014344           84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS----------------EQMFSDDTIRFYAAELVLALEYLHNM  147 (426)
Q Consensus        84 ~hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~----------------~~~l~~~~~~~~~~qil~aL~~LH~~  147 (426)
                      +|||||++++++.++..+|+|||||+||+|.++++...                ...+++..+..++.||+.||+|||++
T Consensus        85 ~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~  164 (311)
T d1t46a_          85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (311)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            69999999999999999999999999999999987543                22589999999999999999999999


Q ss_pred             CCcccCCCCCCeeeccCCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCC
Q 014344          148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGP  227 (426)
Q Consensus       148 giiHrDlKp~NiLl~~~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      |||||||||+|||++.++.+||+|||+++.......                                            
T Consensus       165 ~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~--------------------------------------------  200 (311)
T d1t46a_         165 NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--------------------------------------------  200 (311)
T ss_dssp             TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT--------------------------------------------
T ss_pred             CeeecccccccccccccCcccccccchheeccCCCc--------------------------------------------
Confidence            999999999999999999999999999986542110                                            


Q ss_pred             CCCCCCCCCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc---CCCCC
Q 014344          228 DPPSRSDSDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLY-GATPFRGSSRKETFYRILC---RPPDL  303 (426)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~---~~~~~  303 (426)
                                .......+||+.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+.+.+++.   .+...
T Consensus       201 ----------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~  270 (311)
T d1t46a_         201 ----------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP  270 (311)
T ss_dssp             ----------SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCC
T ss_pred             ----------ceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCc
Confidence                      112334579999999999999999999999999999999998 7777877776666655542   23333


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCCChHHHhc
Q 014344          304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKG  333 (426)
Q Consensus       304 ~~~~~~~~~li~~~L~~dP~~R~s~~eil~  333 (426)
                      ...+..+.+||.+||+.||.+|||+++|++
T Consensus       271 ~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         271 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            456889999999999999999999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-50  Score=384.02  Aligned_cols=251  Identities=18%  Similarity=0.247  Sum_probs=201.5

Q ss_pred             EEEeeecccCceEEEEEEEcCCC---ceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           19 RIVSALGRGAKGVVFLVKDVESS---ESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        19 ~i~~~LG~G~~g~V~~a~~~~~~---~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      ++.++||+|+||+||+|++..++   ..||||++.+.            ......+++.+|+++|++++||||+++++++
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~------------~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~   97 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI------------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC   97 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCC------------CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc------------cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEE
Confidence            34678999999999999986643   35899998432            1233567899999999999999999999987


Q ss_pred             ec-CCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecccc
Q 014344           96 ST-DKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDFDL  174 (426)
Q Consensus        96 ~~-~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DFgl  174 (426)
                      .. +..+++|||||++|+|.+++.... ..++...+..++.|++.||.|||+.||+||||||+|||+++++.+||+|||+
T Consensus        98 ~~~~~~~~lv~E~~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~  176 (311)
T d1r0pa_          98 LRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGL  176 (311)
T ss_dssp             EETTTEEEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGG
T ss_pred             EecCCceEEEEEEeecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccc
Confidence            54 568999999999999999876543 4478888999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCccch
Q 014344          175 STKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYVAPE  254 (426)
Q Consensus       175 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  254 (426)
                      ++.+.......                                                    ........||+.|+|||
T Consensus       177 ~~~~~~~~~~~----------------------------------------------------~~~~~~~~gt~~y~aPE  204 (311)
T d1r0pa_         177 ARDMYDKEFDS----------------------------------------------------VHNKTGAKLPVKWMALE  204 (311)
T ss_dssp             GCCTTTTTCCC----------------------------------------------------TTCTTCSSCCGGGSCHH
T ss_pred             hhhcccccccc----------------------------------------------------ceecccccccccccChH
Confidence            98764322110                                                    11122346899999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhc--CCCCCCCCCHHHHHHHHHHhccCCCCCCChHHH
Q 014344          255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRILC--RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI  331 (426)
Q Consensus       255 ~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~ei  331 (426)
                      ++.+..++.++|||||||++|||++|..||... +..+....+..  .+......+..+.+||.+||..||++|||+.||
T Consensus       205 ~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei  284 (311)
T d1r0pa_         205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL  284 (311)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            999999999999999999999999977776554 33333444432  333344567899999999999999999999999


Q ss_pred             hcC
Q 014344          332 KGH  334 (426)
Q Consensus       332 l~h  334 (426)
                      ++|
T Consensus       285 ~~~  287 (311)
T d1r0pa_         285 VSR  287 (311)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4e-50  Score=379.37  Aligned_cols=252  Identities=21%  Similarity=0.290  Sum_probs=205.6

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC-CCcceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH-PLLPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~l~~~   94 (426)
                      ++|+|++.||+|+||+||+|++..+|+.||||++.+..               ....+..|+++++.|.| +|++.++++
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---------------~~~~~~~e~~~~~~l~~~~~i~~~~~~   69 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---------------DAPQLRDEYRTYKLLAGCTGIPNVYYF   69 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---------------TSCCHHHHHHHHHHTTTCTTCCCEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc---------------CcHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            45999999999999999999999999999999984321               12346678999999985 899999999


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc-----CCcEEE
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE-----NGHIML  169 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~-----~g~ikL  169 (426)
                      +..+...|+||||| |++|.+++.... ..++...+..++.|++.||+|||++||+||||||+|||++.     ++.+||
T Consensus        70 ~~~~~~~~~vme~~-~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl  147 (293)
T d1csna_          70 GQEGLHNVLVIDLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYV  147 (293)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred             eecCCccEEEEEec-CCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEE
Confidence            99999999999999 789998876543 46999999999999999999999999999999999999974     578999


Q ss_pred             ecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014344          170 VDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEE  249 (426)
Q Consensus       170 ~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  249 (426)
                      +|||+|+.+.......                                                 ........+++||+.
T Consensus       148 ~DFG~a~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~GT~~  178 (293)
T d1csna_         148 VDFGMVKFYRDPVTKQ-------------------------------------------------HIPYREKKNLSGTAR  178 (293)
T ss_dssp             CCCTTCEESBCTTTCC-------------------------------------------------BCCCCCCCCCCSCTT
T ss_pred             cccceeEEcccCcccc-------------------------------------------------ceeecccCceEEchh
Confidence            9999998764321110                                                 001123456789999


Q ss_pred             CccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhc----CC--CCCCCCCHHHHHHHHHHhcc
Q 014344          250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILC----RP--PDLVGEPTPLRNLIRRLLEK  320 (426)
Q Consensus       250 y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~---~~~~~~~i~~----~~--~~~~~~~~~~~~li~~~L~~  320 (426)
                      |||||++.+..++.++|||||||++|||++|+.||.+..   ....+.++..    .+  ....+.|+++.+++..|+..
T Consensus       179 y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~  258 (293)
T d1csna_         179 YMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNL  258 (293)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHC
T ss_pred             hcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999998653   3333333321    11  11235688999999999999


Q ss_pred             CCCCCCChHHHhc
Q 014344          321 DPTKRIGVEEIKG  333 (426)
Q Consensus       321 dP~~R~s~~eil~  333 (426)
                      +|++||+++.+.+
T Consensus       259 ~~~~rP~y~~l~~  271 (293)
T d1csna_         259 AFDATPDYDYLQG  271 (293)
T ss_dssp             CTTCCCCHHHHHH
T ss_pred             CcccCcCHHHHHH
Confidence            9999999776643

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-50  Score=382.72  Aligned_cols=256  Identities=19%  Similarity=0.310  Sum_probs=200.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCC-cceeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-LPRLRGV   94 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~-iv~l~~~   94 (426)
                      ++|++++.||+|+||+||+|++..+|+.||||++....               ...++..|+++++.+.|++ |+.+.++
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---------------~~~~~~~E~~i~~~l~~~~~i~~~~~~   71 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---------------KHPQLHIESKIYKMMQGGVGIPTIRWC   71 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT---------------TSCCHHHHHHHHHHSTTSTTCCCEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc---------------cCHHHHHHHHHHHHccCCCcccEEEEE
Confidence            36999999999999999999999999999999975321               1234678999999998765 5566677


Q ss_pred             eecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeecc---CCcEEEec
Q 014344           95 LSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQE---NGHIMLVD  171 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~---~g~ikL~D  171 (426)
                      +.+.+..++||||| +++|...+... .+.+++..+..++.|++.||+|||++|||||||||+|||++.   +..+||+|
T Consensus        72 ~~~~~~~~ivme~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~D  149 (299)
T d1ckia_          72 GAEGDYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIID  149 (299)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECC
T ss_pred             EecCCEEEEEEEEc-CCchhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeec
Confidence            78889999999999 46666655443 356999999999999999999999999999999999999864   45799999


Q ss_pred             ccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014344          172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNSFVGTEEYV  251 (426)
Q Consensus       172 Fgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  251 (426)
                      ||+|+.+.......                                                 ........+.+||+.||
T Consensus       150 FG~a~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~gt~~y~  180 (299)
T d1ckia_         150 FGLAKKYRDARTHQ-------------------------------------------------HIPYRENKNLTGTARYA  180 (299)
T ss_dssp             CSSCEECBCTTTCC-------------------------------------------------BCCCCBCCSCCCCSSSC
T ss_pred             cCcceecccccccc-------------------------------------------------ceeccccCCcCCCcccc
Confidence            99998764322110                                                 00112345668999999


Q ss_pred             cchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-------hcCC--CCCCCCCHHHHHHHHHHhccCC
Q 014344          252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-------LCRP--PDLVGEPTPLRNLIRRLLEKDP  322 (426)
Q Consensus       252 aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i-------~~~~--~~~~~~~~~~~~li~~~L~~dP  322 (426)
                      |||++.+..++.++|||||||++|||++|+.||...........+       ...+  ....+.|+++.+||.+||..||
T Consensus       181 aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p  260 (299)
T d1ckia_         181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRF  260 (299)
T ss_dssp             CHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCT
T ss_pred             CHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCCh
Confidence            999999999999999999999999999999999876654332211       1111  1134568999999999999999


Q ss_pred             CCCCChHH---HhcCCCc
Q 014344          323 TKRIGVEE---IKGHEFF  337 (426)
Q Consensus       323 ~~R~s~~e---il~hp~f  337 (426)
                      ++||++++   +|+|+|.
T Consensus       261 ~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         261 DDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             TCCCCHHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHHH
Confidence            99999874   4666654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-49  Score=376.53  Aligned_cols=248  Identities=20%  Similarity=0.241  Sum_probs=189.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcceeeeee
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL   95 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~l~~~~   95 (426)
                      .+|.+.+.||+|+||+||+|+.  +|+.||||++......              ......|+..+.+++||||+++++++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~--------------~~~~e~ei~~~~~~~HpnIv~~~~~~   66 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREER--------------SWFREAEIYQTVMLRHENILGFIAAD   66 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHH--------------HHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchh--------------HHHHHHHHHHHhhCCCCcCcceEEEE
Confidence            4689999999999999999985  6899999998543211              11122355555678999999999999


Q ss_pred             ecCC----eEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH--------CCCcccCCCCCCeeecc
Q 014344           96 STDK----FVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHN--------MGIVYRDLKPENIMIQE  163 (426)
Q Consensus        96 ~~~~----~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~--------~giiHrDlKp~NiLl~~  163 (426)
                      .++.    .+|+|||||++|+|.++++..   .+++..+..++.|++.||.|||+        +|||||||||+||||+.
T Consensus        67 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~  143 (303)
T d1vjya_          67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK  143 (303)
T ss_dssp             EEECSSSEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECT
T ss_pred             EeCCCcceEEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcC
Confidence            7644    689999999999999998754   38999999999999999999996        59999999999999999


Q ss_pred             CCcEEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014344          164 NGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSDSDSSEKSNS  243 (426)
Q Consensus       164 ~g~ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (426)
                      +|.+||+|||+++.......                                                    ........
T Consensus       144 ~~~~Kl~DFGl~~~~~~~~~----------------------------------------------------~~~~~~~~  171 (303)
T d1vjya_         144 NGTCCIADLGLAVRHDSATD----------------------------------------------------TIDIAPNH  171 (303)
T ss_dssp             TSCEEECCCTTCEEEETTTT----------------------------------------------------EECC----
T ss_pred             CCCeEEEecCccccccCCCc----------------------------------------------------ceeccccc
Confidence            99999999999987642210                                                    00112334


Q ss_pred             cccCCCCccchhhcCCC------CChhhHHHHHHHHHHHHHhCCCCCCCCC--------------HHHHHHHHhcCC---
Q 014344          244 FVGTEEYVAPEIIEGKG------HDFAVDWWSLGVVLHEMLYGATPFRGSS--------------RKETFYRILCRP---  300 (426)
Q Consensus       244 ~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~ell~g~~pf~~~~--------------~~~~~~~i~~~~---  300 (426)
                      .+||+.|||||++.+..      ++.++|||||||++|||++|.+||....              ..+.........   
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (303)
T d1vjya_         172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR  251 (303)
T ss_dssp             CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             eecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccC
Confidence            67999999999987653      5678999999999999999988874321              112222222211   


Q ss_pred             CCCCCC------CHHHHHHHHHHhccCCCCCCChHHHhcC
Q 014344          301 PDLVGE------PTPLRNLIRRLLEKDPTKRIGVEEIKGH  334 (426)
Q Consensus       301 ~~~~~~------~~~~~~li~~~L~~dP~~R~s~~eil~h  334 (426)
                      +..+..      +..+.+||.+||+.||++|||+.||+++
T Consensus       252 p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         252 PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             CCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            111111      1348899999999999999999999863

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.5e-49  Score=381.30  Aligned_cols=253  Identities=21%  Similarity=0.332  Sum_probs=196.3

Q ss_pred             CCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-----------
Q 014344           16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-----------   84 (426)
Q Consensus        16 ~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-----------   84 (426)
                      ++|+++++||+|+||+||+|+++.+|+.||||++.+...              ..+.+.+|+.+|+.+.           
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~--------------~~~~~~~Ei~~l~~l~~~~~~~~~~~~   78 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV--------------YTEAAEDEIKLLQRVNDADNTKEDSMG   78 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH--------------HHHHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc--------------chHHHHHHHHHHHHhcchhhhhhhhcC
Confidence            349999999999999999999999999999999965432              2345667888888774           


Q ss_pred             CCCcceeeeeee--cCCeEEEEEeccCCCChH-HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH-CCCcccCCCCCCee
Q 014344           85 HPLLPRLRGVLS--TDKFVGYAIDYCPGRDLH-SLRKQQSEQMFSDDTIRFYAAELVLALEYLHN-MGIVYRDLKPENIM  160 (426)
Q Consensus        85 hp~iv~l~~~~~--~~~~~~lV~Ey~~gg~L~-~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~-~giiHrDlKp~NiL  160 (426)
                      |+||+++++++.  .....+++|+++..+... .+........+++..++.++.||+.||+|||+ +||+||||||+|||
T Consensus        79 ~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIl  158 (362)
T d1q8ya_          79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL  158 (362)
T ss_dssp             HTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEE
T ss_pred             cCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHee
Confidence            578999998875  456777777777655443 33444455679999999999999999999998 89999999999999


Q ss_pred             eccCCc------EEEecccccccCCCCCCCCCcchhhccccccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 014344          161 IQENGH------IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHSPRIGPDPPSRSD  234 (426)
Q Consensus       161 l~~~g~------ikL~DFgls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (426)
                      ++.++.      ++++|||.+.....                                                      
T Consensus       159 l~~~~~~~~~~~~kl~dfg~s~~~~~------------------------------------------------------  184 (362)
T d1q8ya_         159 MEIVDSPENLIQIKIADLGNACWYDE------------------------------------------------------  184 (362)
T ss_dssp             EEEEETTTTEEEEEECCCTTCEETTB------------------------------------------------------
T ss_pred             eeccCcccccceeeEeeccccccccc------------------------------------------------------
Confidence            987653      99999999875431                                                      


Q ss_pred             CCCCCCccccccCCCCccchhhcCCCCChhhHHHHHHHHHHHHHhCCCCCCCCCHH------HHHH---HHhcCC-----
Q 014344          235 SDSSEKSNSFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK------ETFY---RILCRP-----  300 (426)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~------~~~~---~i~~~~-----  300 (426)
                           .....+||+.|+|||++.+..|+.++|+||+||++++|++|+.||......      ....   .++...     
T Consensus       185 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~  259 (362)
T d1q8ya_         185 -----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLL  259 (362)
T ss_dssp             -----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHH
T ss_pred             -----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHh
Confidence                 123456999999999999999999999999999999999999999765321      1111   111000     


Q ss_pred             -------------------CC----------------CCCCCHHHHHHHHHHhccCCCCCCChHHHhcCCCcCCCC
Q 014344          301 -------------------PD----------------LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN  341 (426)
Q Consensus       301 -------------------~~----------------~~~~~~~~~~li~~~L~~dP~~R~s~~eil~hp~f~~~~  341 (426)
                                         ..                ....+..+.|||.+||.+||.+|||++|+|+||||+++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         260 RNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             hcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence                               00                001135689999999999999999999999999998654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.94  E-value=2e-27  Score=208.92  Aligned_cols=146  Identities=18%  Similarity=0.180  Sum_probs=108.9

Q ss_pred             cEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhh-hcccCC----CchhhHHHHHHHHHHHhcCCCCcceee
Q 014344           18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-ELTNND----NGDKYRRISFEQRVLRNVEHPLLPRLR   92 (426)
Q Consensus        18 y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~E~~il~~l~hp~iv~l~   92 (426)
                      +.+.++||+|+||+||+|++ .+|+.||||++.......+.. ......    ..........|..+|.++.|++++..+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            46899999999999999998 478999999986433221110 000000    011223456788999999999999988


Q ss_pred             eeeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCeeeccCCcEEEecc
Q 014344           93 GVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLHNMGIVYRDLKPENIMIQENGHIMLVDF  172 (426)
Q Consensus        93 ~~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH~~giiHrDlKp~NiLl~~~g~ikL~DF  172 (426)
                      ++..    .+++|||+++..+..         ++...+..++.||+.||.|||++||+||||||+|||++++ .++|+||
T Consensus        81 ~~~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDF  146 (191)
T d1zara2          81 AWEG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDF  146 (191)
T ss_dssp             EEET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCC
T ss_pred             EecC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEEC
Confidence            7632    279999998766532         4556677899999999999999999999999999999865 5899999


Q ss_pred             cccccC
Q 014344          173 DLSTKL  178 (426)
Q Consensus       173 gls~~~  178 (426)
                      |+|...
T Consensus       147 G~a~~~  152 (191)
T d1zara2         147 PQSVEV  152 (191)
T ss_dssp             TTCEET
T ss_pred             CCcccC
Confidence            998764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.70  E-value=5.5e-08  Score=87.22  Aligned_cols=141  Identities=13%  Similarity=0.108  Sum_probs=94.2

Q ss_pred             CCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC-CCCcceeee
Q 014344           15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE-HPLLPRLRG   93 (426)
Q Consensus        15 ~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~l~~   93 (426)
                      ++.|++.+..+-++.+.||++.  ..++.+.+|+......             .....+..|..+++.|. +--+++++.
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~-------------~~~~~~~~E~~~l~~l~~~vpvP~vl~   77 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYK-------------GTTYDVEREKDMMLWLEGKLPVPKVLH   77 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGT-------------TSTTCHHHHHHHHHHHTTTSCCCCEEE
T ss_pred             hhceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcc-------------cchhhHHHHHHHHHHHhccCCCCcEEE
Confidence            3578888876666678999876  4566788898743211             11234667888888875 444788898


Q ss_pred             eeecCCeEEEEEeccCCCChHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----------------------------
Q 014344           94 VLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFYAAELVLALEYLH----------------------------  145 (426)
Q Consensus        94 ~~~~~~~~~lV~Ey~~gg~L~~l~~~~~~~~l~~~~~~~~~~qil~aL~~LH----------------------------  145 (426)
                      +...++..|+||++++|.++.....       +......++.++...|..||                            
T Consensus        78 ~~~~~~~~~lv~~~l~G~~~~~~~~-------~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (263)
T d1j7la_          78 FERHDGWSNLLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL  150 (263)
T ss_dssp             EEEETTEEEEEEECCSSEEHHHHTT-------TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred             EEecCCceEEEEEeccccccccccc-------ccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHh
Confidence            8888999999999999877754211       00001112222223333333                            


Q ss_pred             -------------------------HC------CCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          146 -------------------------NM------GIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       146 -------------------------~~------giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                                               +.      .++|+|+.|.|||+++++.+-|+||+.+..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             hhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                     21      279999999999998776677999998864

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.18  E-value=3.1e-06  Score=74.98  Aligned_cols=142  Identities=13%  Similarity=0.068  Sum_probs=85.7

Q ss_pred             cEEEeeecccC-ceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCC--CCcceeeee
Q 014344           18 LRIVSALGRGA-KGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEH--PLLPRLRGV   94 (426)
Q Consensus        18 y~i~~~LG~G~-~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--p~iv~l~~~   94 (426)
                      +++. .+..|. .+.||++.. .++..+.+|.....                ....+..|...|+.|..  -.+++++.+
T Consensus        13 ~~~~-~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~----------------~~~~l~~E~~~l~~L~~~gvpvP~v~~~   74 (255)
T d1nd4a_          13 YDWA-QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG----------------ALNELQDEAARLSWLATTGVPCAAVLDV   74 (255)
T ss_dssp             CEEE-ECSCTTSSCEEEEEEC-TTSCCEEEEEECSC----------------TTSCHHHHHHHHHHHHTTTCCBCCEEEE
T ss_pred             CceE-EcCCcccCCeEEEEEe-CCCCEEEEEeCCcc----------------CHhHHHHHHHHHHHHHhcCCCCCceeee
Confidence            4443 334444 468998875 45667888976321                12346678888887753  346788888


Q ss_pred             eecCCeEEEEEeccCCCChHH--------------HHHHhc-----cCCCCHHHH---H----HH---------------
Q 014344           95 LSTDKFVGYAIDYCPGRDLHS--------------LRKQQS-----EQMFSDDTI---R----FY---------------  133 (426)
Q Consensus        95 ~~~~~~~~lV~Ey~~gg~L~~--------------l~~~~~-----~~~l~~~~~---~----~~---------------  133 (426)
                      ..+++..++||++++|.++..              .+.+..     ...+.....   .    .+               
T Consensus        75 ~~~~~~~~~v~~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (255)
T d1nd4a_          75 VTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ  154 (255)
T ss_dssp             EECSSCEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred             cccccceEEEEEeeeccccccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhh
Confidence            888889999999999866532              111110     000100000   0    00               


Q ss_pred             HHHHHHHHHHHHHC-------CCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          134 AAELVLALEYLHNM-------GIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       134 ~~qil~aL~~LH~~-------giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      .......+..+.+.       .++|+|+.|.|||++.++.+-|+||+.+..
T Consensus       155 ~~~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         155 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            00112223444332       379999999999999876778999998764

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.10  E-value=7.5e-06  Score=77.62  Aligned_cols=84  Identities=17%  Similarity=0.174  Sum_probs=51.6

Q ss_pred             EeeecccCceEEEEEEEcCCCceEEEEEeehhh-HHhhhhhcccCCCchhhHHHHHHHHHHHhcC-C--CCcceeeeeee
Q 014344           21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDL-IEKKSKELTNNDNGDKYRRISFEQRVLRNVE-H--PLLPRLRGVLS   96 (426)
Q Consensus        21 ~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h--p~iv~l~~~~~   96 (426)
                      .+.||-|....||++.+..+++.+++|.-.... ....       .-.....+...|...|+.+. +  ..+++++.+  
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~-------~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--  101 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGE-------SWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--  101 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--C-------CCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCC-------CCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--
Confidence            567899999999999988888899999643211 0000       00112345667888888763 2  356666654  


Q ss_pred             cCCeEEEEEeccCCCCh
Q 014344           97 TDKFVGYAIDYCPGRDL  113 (426)
Q Consensus        97 ~~~~~~lV~Ey~~gg~L  113 (426)
                      ++...++|||++.+..+
T Consensus       102 d~~~~~lvmE~L~~~~~  118 (392)
T d2pula1         102 DTEMAVTVMEDLSHLKI  118 (392)
T ss_dssp             ETTTTEEEECCCTTSEE
T ss_pred             cCCCCEEEEeccCCccc
Confidence            44556789999976543

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.44  E-value=0.00025  Score=66.85  Aligned_cols=82  Identities=26%  Similarity=0.449  Sum_probs=55.4

Q ss_pred             CCCCCCcEEEeeecccCceEEEEEEEcC-------CCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcC
Q 014344           12 SLDFSCLRIVSALGRGAKGVVFLVKDVE-------SSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVE   84 (426)
Q Consensus        12 ~l~~~~y~i~~~LG~G~~g~V~~a~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~   84 (426)
                      .++.++++| +.|+-|-.-.+|++....       ..+.|.+++.-..               ...-...+|..+++.+.
T Consensus        39 ~~~~~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~---------------~~~idr~~E~~i~~~ls  102 (395)
T d1nw1a_          39 TVPLEHLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---------------ETESHLVAESVIFTLLS  102 (395)
T ss_dssp             HCCGGGEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---------------CCHHHHHHHHHHHHHHH
T ss_pred             CCCccceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc---------------chhhHHHHHHHHHHHHH
Confidence            355566665 578889999999998653       2456788886211               11123456888999885


Q ss_pred             -CCCcceeeeeeecCCeEEEEEeccCCCCh
Q 014344           85 -HPLLPRLRGVLSTDKFVGYAIDYCPGRDL  113 (426)
Q Consensus        85 -hp~iv~l~~~~~~~~~~~lV~Ey~~gg~L  113 (426)
                       +.-.+++++++.+    ++|+||++|..|
T Consensus       103 ~~gl~Pkll~~~~~----g~I~efi~g~~l  128 (395)
T d1nw1a_         103 ERHLGPKLYGIFSG----GRLEEYIPSRPL  128 (395)
T ss_dssp             HTTSSSCEEEEETT----EEEECCCCEEEC
T ss_pred             hCCCCCeEEEEcCC----ceEEEEeccccC
Confidence             5555688888753    689999987544

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.00055  Score=62.54  Aligned_cols=132  Identities=16%  Similarity=0.183  Sum_probs=75.6

Q ss_pred             ceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCcc--eee-----eeeecCCeE
Q 014344           29 KGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLP--RLR-----GVLSTDKFV  101 (426)
Q Consensus        29 ~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv--~l~-----~~~~~~~~~  101 (426)
                      --.||++.. .+|+.|++|+.....              .....+..|...|..|....++  ...     ..+..+...
T Consensus        35 EN~vy~v~~-~dg~~~VlK~~rp~~--------------~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~   99 (325)
T d1zyla1          35 ENRVYQFQD-EDRRRFVVKFYRPER--------------WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFY   99 (325)
T ss_dssp             SSEEEEECC-TTCCCEEEEEECTTT--------------SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEE
T ss_pred             cceeEEEEc-CCCCEEEEEEeCCCC--------------CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEE
Confidence            458999886 568889999984321              1234567788888887532221  111     123456778


Q ss_pred             EEEEeccCCCChH-----HH---------HHHh-c-------------------------cCCCCHHHHHHHHHHHHHHH
Q 014344          102 GYAIDYCPGRDLH-----SL---------RKQQ-S-------------------------EQMFSDDTIRFYAAELVLAL  141 (426)
Q Consensus       102 ~lV~Ey~~gg~L~-----~l---------~~~~-~-------------------------~~~l~~~~~~~~~~qil~aL  141 (426)
                      +.+++++.|..+.     .+         ++.. .                         ...++......+...+-..+
T Consensus       100 ~~l~~~~~G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  179 (325)
T d1zyla1         100 FAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELI  179 (325)
T ss_dssp             EEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHH
T ss_pred             EEEEeecCCcCCCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHH
Confidence            8999999863321     11         0100 0                         00112222222222222333


Q ss_pred             HHHHH-------CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          142 EYLHN-------MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       142 ~~LH~-------~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      +.+..       .++||+|+.|.|||++. + ..++||+.+..
T Consensus       180 ~~l~~~~~~~~p~~liHgDlh~~NvL~~~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         180 AAVTAHWREDFTVLRLHGDCHAGNILWRD-G-PMFVDLDDARN  220 (325)
T ss_dssp             HHHHHHCCSCSCCEECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred             HHHHHhccccCCceeecCCCCcccEEEeC-C-ceEEechhccc
Confidence            33322       36899999999999974 3 45899998875

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.23  E-value=0.00072  Score=61.26  Aligned_cols=147  Identities=15%  Similarity=0.159  Sum_probs=80.4

Q ss_pred             CCCCcEEEeeecccCceEEEEEEEcCCCceEEEEEeehhhHHhhhhhcccCCCchhhHHHHHHHHHHHhcCCCCc--cee
Q 014344           14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLL--PRL   91 (426)
Q Consensus        14 ~~~~y~i~~~LG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i--v~l   91 (426)
                      +++...-++.|..|---+.|++...  +..|++|++....               ....+..|+.+|..|...++  +..
T Consensus        16 ~lg~~~~~~~i~~G~~N~ny~v~t~--~g~yVLri~~~~~---------------~~~~l~~~~~~l~~L~~~g~pvp~p   78 (316)
T d2ppqa1          16 DVGSLTSYKGIAEGVENSNFLLHTT--KDPLILTLYEKRV---------------EKNDLPFFLGLMQHLAAKGLSCPLP   78 (316)
T ss_dssp             CCCCEEEEEEECC---EEEEEEEES--SCCEEEEEECC------------------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CCCCceEeecCCCCcccCeEEEEEC--CCcEEEEEcCCCC---------------CHHHHHHHHHHHHhhhhcccccccc
Confidence            3455555667778888999998854  3458999983321               12345667778887753222  111


Q ss_pred             ee------eeecCCeEEEEEeccCCCChHH-----H---------HHHhc-------------------------cCCCC
Q 014344           92 RG------VLSTDKFVGYAIDYCPGRDLHS-----L---------RKQQS-------------------------EQMFS  126 (426)
Q Consensus        92 ~~------~~~~~~~~~lV~Ey~~gg~L~~-----l---------~~~~~-------------------------~~~l~  126 (426)
                      .-      +.......+.++.++.|.....     .         .+...                         .....
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  158 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence            11      1223455666777776543211     0         00000                         00001


Q ss_pred             HHHHHHHHHHHHHHHHHHHH----CCCcccCCCCCCeeeccCCcEEEeccccccc
Q 014344          127 DDTIRFYAAELVLALEYLHN----MGIVYRDLKPENIMIQENGHIMLVDFDLSTK  177 (426)
Q Consensus       127 ~~~~~~~~~qil~aL~~LH~----~giiHrDlKp~NiLl~~~g~ikL~DFgls~~  177 (426)
                      .......+..+...+.-.+.    .|+||+|+.++||+++.+...-+.||+.+..
T Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence            11122223333333333332    3799999999999999887779999999875