Citrus Sinensis ID: 014349
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 426 | 2.2.26 [Sep-21-2011] | |||||||
| Q8L3X9 | 461 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.983 | 0.908 | 0.786 | 0.0 | |
| P56902 | 421 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.953 | 0.964 | 0.524 | 1e-113 | |
| O94297 | 426 | Putative 3-oxoacyl-[acyl- | yes | no | 0.955 | 0.955 | 0.483 | 1e-110 | |
| Q9NWU1 | 459 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.943 | 0.875 | 0.497 | 1e-107 | |
| Q9D404 | 459 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.943 | 0.875 | 0.492 | 1e-107 | |
| Q0VCA7 | 460 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.943 | 0.873 | 0.488 | 1e-100 | |
| O34340 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.936 | 0.966 | 0.456 | 4e-97 | |
| Q9KQH9 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.941 | 0.968 | 0.443 | 3e-95 | |
| P55338 | 415 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.938 | 0.963 | 0.443 | 8e-94 | |
| Q83E37 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.938 | 0.966 | 0.44 | 1e-92 |
| >sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/422 (78%), Positives = 376/422 (89%), Gaps = 3/422 (0%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
MVTPLG G ETTWRRLI GECGIR +T +DLKM +FD ET+L+ F QL+SKVAA VP G
Sbjct: 40 MVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGS 99
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ GEF+E WLNSK ++A FI YA+CAADEAL DA+WLP+++ +KERTGVSIGGGIGS
Sbjct: 100 NPGEFDEALWLNSK---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGS 156
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
I D V+AAQ+ICEKRLRRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSI
Sbjct: 157 ICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSI 216
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGF
Sbjct: 217 GDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGF 276
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
VIGEGSGV+VLEE EHAK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+Q
Sbjct: 277 VIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQ 336
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
SGL +Q+DYVNAHATSTP+GD VEA AI+TVFS+HATSG+LAFSSTKGA GHLLGAAGA
Sbjct: 337 SGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGA 396
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAIF++LAIHHGVAP+TLN+ PDPIF+ FMPLT SK M + A+SNSFGFGGTNASL
Sbjct: 397 VEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASL 456
Query: 421 LF 422
LF
Sbjct: 457 LF 458
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Catalyzes all the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Able to elongate saturated acyl chains from 4 to at least 16 carbons. Uses malonyl-CoA but not acetyl-CoA as primer substrate. When expressed in a heterologous system, reveals a bimodal distribution of products, with peaks at C8 and C14-C16. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti (strain 1021) GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/425 (52%), Positives = 290/425 (68%), Gaps = 19/425 (4%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
MV+PLGCG E +W RL+ G+ R++T F+ E L +K+A +P G
Sbjct: 11 MVSPLGCGTEVSWARLLTGDNAARKVT-------EFEVE-------DLPAKIACRIPFGD 56
Query: 61 -SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIG 119
S G FN D W+ K+ R + FI YA+ AAD AL DA W P + TGV IG GIG
Sbjct: 57 GSDGTFNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPESDEDQISTGVLIGSGIG 116
Query: 120 SISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
+ VDA + +K RR+SPFFIP LIN+A+G VS+++ +GPNH+ VTAC+TGAH+
Sbjct: 117 GLEGIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHA 176
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
IGDA+R+I GD+DVMVAGGTES I +S+AGF +AL+T++N P++ASRP+D RDG
Sbjct: 177 IGDASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYDADRDG 236
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
FV+GEG+G++VLEELEHA+ RGAKIYAEV GYG+SGDA HIT P DG+GA M ALK
Sbjct: 237 FVMGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALK 296
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359
++G+ + +DY+NAH TST + DT+E A+ + D A+ ++ SSTK AIGHLLGAAG
Sbjct: 297 RAGVTAADIDYINAHGTST-MADTIELGAVERLVGDSAS--RISMSSTKSAIGHLLGAAG 353
Query: 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419
AVEAIF+ LAI +AP TLNL P + +P A K I+ ALSNSFGFGGTNAS
Sbjct: 354 AVEAIFSALAIRDNIAPPTLNLDNPSVETKIDLVPHVARK-REINVALSNSFGFGGTNAS 412
Query: 420 LLFTK 424
L+ +
Sbjct: 413 LILRR 417
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Rhizobium meliloti (strain 1021) (taxid: 266834) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.13c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/428 (48%), Positives = 281/428 (65%), Gaps = 21/428 (4%)
Query: 2 VTPLGCGAETTWRRLIVGECGIREIT--PEDLKMGNFDRETQLHAFGQLTSKVAAVVPCG 59
VTPLG G +T WR LI G+ GI + PE + Q+ SKVA V+P G
Sbjct: 12 VTPLGNGVKTNWRNLIQGKSGIVSLKGFPE---------------YEQIPSKVAGVIPRG 56
Query: 60 ISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIG 119
E+N +++ R +A F AL +A EAL DA+W+ D+ +K TGV G GIG
Sbjct: 57 KEKEEWNVLDYVDQGKLREVATFTQLALTSAAEALKDARWIDIDEQEKLATGVCFGTGIG 116
Query: 120 SISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
++ D ++ ++ + +R++SP I +ILINM +G++S +YGF NH TACA G H+
Sbjct: 117 NLDDALNENGVLNKAGIRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAGCHA 176
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
IGDA I+ G +DV++AGG+ES I+ L++AGF K+R+L+TK+N P+ ASRPFD RDG
Sbjct: 177 IGDAFNFIKLGHADVIIAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFDANRDG 236
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
FVIGEGS LVLEELEHAK R A IYAE+ GYG++ D++HIT P+ +G A AM R+LK
Sbjct: 237 FVIGEGSAALVLEELEHAKNRNAHIYAEIVGYGLASDSYHITAPNPNGDAAYYAMKRSLK 296
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD-HATSGSLAFSSTKGAIGHLLGAA 358
Q+GL + Q+DY+NAHATST LGD E+ AI + D + + SS+KG+IGHLLGAA
Sbjct: 297 QAGLSASQLDYINAHATSTKLGDVAESIAITRLLCDVNRNPEAFPVSSSKGSIGHLLGAA 356
Query: 359 GAVEAIFAVLAIHHGVAPLTLNLAKPD--PIFNDNFMPLTASKDMPISAALSNSFGFGGT 416
GA+E+++ VL + GV P TLN D F +++P +K+ I+ ALSNSFGFGGT
Sbjct: 357 GAIESVYTVLTVQKGVLPPTLNFEYSDIPQQFQCDYVP-NVAKESRINVALSNSFGFGGT 415
Query: 417 NASLLFTK 424
NASL F K
Sbjct: 416 NASLCFKK 423
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1 | Back alignment and function description |
|---|
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/422 (49%), Positives = 275/422 (65%), Gaps = 20/422 (4%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G W RLI GE GI + E+ K + VAA VP G
Sbjct: 51 LVTPLGVGTHLVWDRLIGGESGIVSLVGEEYK--------------SIPCSVAAYVPRGS 96
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
G+FNE ++++ D +S++ A+ AA+ A+ D+ W P + + TGV+IG G+
Sbjct: 97 DEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIP 156
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + A K ++SPFF+P+IL+NMA+G VS++Y +GPNHA TAC TGAH++
Sbjct: 157 LEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAV 216
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF
Sbjct: 217 GDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGF 274
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+ VLVLEE EHA +R A+IYAEV GYG+SGDA HIT P +G+GA+ M ALK
Sbjct: 275 VMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKD 334
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+Q ++ Y+NAHATSTPLGD E AI+ +F DHA +LA SSTKGA GHLLGAAGA
Sbjct: 335 AGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAY--ALAVSSTKGATGHLLGAAGA 392
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
VEA F LA ++ P TLNL +P F+ N++PL A K L+NSFGFGGTNA
Sbjct: 393 VEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNA 452
Query: 419 SL 420
+L
Sbjct: 453 TL 454
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1 | Back alignment and function description |
|---|
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/422 (49%), Positives = 278/422 (65%), Gaps = 20/422 (4%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G + W RL+ GE GI + ++ K + VAA VP G
Sbjct: 51 LVTPLGVGTQLVWDRLLRGESGIVSVVGDEYK--------------NIPCSVAAYVPRGP 96
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
G+FNE+++++ D +S++ A+ AA+ AL D+ W P + + TGV+IG G+
Sbjct: 97 HEGQFNEENFVSKSDAKSMSSSTIMAVGAAELALKDSGWHPKREADQVATGVAIGMGMVP 156
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + A + K ++SPFF+P+ILINMA+G VS++Y +GPNH+ TAC TGAH++
Sbjct: 157 LEVISETALLFQTKGYNKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAV 216
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL++ N P+ A RPF RDGF
Sbjct: 217 GDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSS--NPDPKLACRPFHPERDGF 274
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+ VLVLEE EHA +RGA+IYAE+ GYG+SGDA HIT P +G+GA+ M A+K
Sbjct: 275 VMGEGAAVLVLEEHEHAVQRGARIYAEILGYGLSGDAGHITAPDPEGEGALRCMAAAVKD 334
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+ Q+ YVNAHATSTPLGD E AI+ +F DHA +LA SSTKGA GHLLGAAGA
Sbjct: 335 AGVSPEQISYVNAHATSTPLGDAAENRAIKRLFRDHAC--ALAISSTKGATGHLLGAAGA 392
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
VEA F LA +H P TLNL +P F+ N++PL + K L+NSFGFGGTNA
Sbjct: 393 VEATFTALACYHQKLPPTLNLDCTEPEFDLNYVPLESQEWKAEGRCIGLTNSFGFGGTNA 452
Query: 419 SL 420
+L
Sbjct: 453 TL 454
|
May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q0VCA7|OXSM_BOVIN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus GN=OXSM PE=2 SV=1 | Back alignment and function description |
|---|
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/422 (48%), Positives = 271/422 (64%), Gaps = 20/422 (4%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G + W RL+ GE GI + ++ + + VAA VP G
Sbjct: 52 LVTPLGVGTQLVWDRLVRGESGIVSLVGDE--------------YQSIPCSVAAYVPRGC 97
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
G+FNE +++ D +S++ A+ AA+ AL DA W P + + TGV+IG G+
Sbjct: 98 DEGQFNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVP 157
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + A K ++SPFF+P+IL+NMASG VS+++ +GPNHA TAC TGAH++
Sbjct: 158 LEVISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAV 217
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R + GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF
Sbjct: 218 GDSFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGF 275
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+ VLVLEE HA +RGA++YAE+ GYG+SGDA HIT P G+GA M A+K
Sbjct: 276 VMGEGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKD 335
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+Q +V Y+NAHATSTPLGD E AI+ +F DHA LA SSTKGA GHLLG AGA
Sbjct: 336 AGIQPEEVSYINAHATSTPLGDAAENKAIKQLFKDHAH--VLAVSSTKGATGHLLGTAGA 393
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
EA F LA +H P TLNL +P F+ N++PL A K AL+NSFGFGGTNA
Sbjct: 394 AEAAFTALACYHRKLPPTLNLDCTEPHFDLNYVPLKAQEWKAENRRIALTNSFGFGGTNA 453
Query: 419 SL 420
+L
Sbjct: 454 TL 455
|
May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Bos taurus (taxid: 9913) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (911), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/425 (45%), Positives = 267/425 (62%), Gaps = 26/425 (6%)
Query: 2 VTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGIS 61
++PLG +T+W I G GI IT D + + +KVAA +
Sbjct: 14 LSPLGNDVDTSWNNAINGVSGIGPITRVDAE--------------EYPAKVAAELK---- 55
Query: 62 SGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSI 121
+FN + +++ K+ R + RF YA+ AA A+ DA +D+ R GV +G GIG +
Sbjct: 56 --DFNVEDYMDKKEARKMDRFTQYAVVAAKMAVEDADLNITDE-IAPRVGVWVGSGIGGL 112
Query: 122 SDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIG 181
++ K RR+SPFF+P ++ +MA+G +S+ G +G N VTACATG +SIG
Sbjct: 113 ETLESQFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIG 172
Query: 182 DAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 241
DA ++IQ GD+DVMV GGTE+ + +S AGF ++AL+T N P+ ASRPFD RDGFV
Sbjct: 173 DAFKVIQRGDADVMVTGGTEAPLTRMSFAGFSANKALST--NPDPKTASRPFDKNRDGFV 230
Query: 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 301
+GEG+G++VLEELEHA RGAKIY E+ GYG +GDA+HIT P DG+G AM A+K +
Sbjct: 231 MGEGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDA 290
Query: 302 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAV 361
G+ ++DY+NAH TST D E AI+TVF +HA LA SSTK GHLLGAAG +
Sbjct: 291 GIAPEEIDYINAHGTSTYYNDKYETMAIKTVFGEHAH--KLAVSSTKSMTGHLLGAAGGI 348
Query: 362 EAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 421
EAIF++LAI GV P T+N+ PD + +++P A + ++ LSNS GFGG NA+L+
Sbjct: 349 EAIFSILAIKEGVIPPTINIQTPDEECDLDYVPDEARR-QELNYVLSNSLGFGGHNATLI 407
Query: 422 FTKCQ 426
F K Q
Sbjct: 408 FKKYQ 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 | Back alignment and function description |
|---|
Score = 349 bits (895), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/424 (44%), Positives = 262/424 (61%), Gaps = 23/424 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
M++P+G E++W+ L+ G+ GI I E NF +++ A +V
Sbjct: 13 MLSPVGNTVESSWKALLAGQSGIVNI--EHFDTTNF------------STRFAGLVKG-- 56
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
F+ + +++ KD R + FI Y + A +AL D+ L ++ R GV+IG GIG
Sbjct: 57 ----FDCEQYMSKKDARKMDLFIQYGIAAGIQALEDSG-LEVNEENAARIGVAIGSGIGG 111
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ Q + EK R++SPFF+P ++NM +G++S+ G +GPN A TAC TG H+I
Sbjct: 112 LELIETGHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNI 171
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G AARMI +GD+D MVAGG E + L MAGF ++AL+T+ N PQ+ASRP+D RDGF
Sbjct: 172 GHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGF 230
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+G+G+G++VLEE EHAK RGAKIYAEV G+GMSGDA+H+T P DG G LAM A++
Sbjct: 231 VLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRD 290
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+ Q+ YVNAH TSTP GD E I+ + T L SSTK GHLLGAAG+
Sbjct: 291 AGVTGEQIGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVL-VSSTKSMTGHLLGAAGS 349
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAI V+++ + P T+NL P+ + +P A K + A+ NSFGFGGTN SL
Sbjct: 350 VEAIITVMSLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSL 409
Query: 421 LFTK 424
+F +
Sbjct: 410 IFKR 413
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 344 bits (882), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 189/426 (44%), Positives = 268/426 (62%), Gaps = 26/426 (6%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
M++P+G E++W+ L+ G+ GI I E NF +++ A +V
Sbjct: 13 MLSPVGNTVESSWKALLEGQSGIVNI--EHFDATNF------------STRFAGLVK--- 55
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F+ +++ KD R + FI Y + A +AL D+ +++ R GV+IG GIG
Sbjct: 56 ---DFDCTEYMSKKDARKMDLFIQYGIAAGIQALDDSGLEITEE-NAARVGVAIGSGIGG 111
Query: 121 ISDTVDAAQ-MICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
+ D ++A + EK R++SPFF+P ++NM +G++S+ G +GPN A TAC TG H+
Sbjct: 112 L-DLIEAGHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHN 170
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
IG AARMI +GD++ MVAGG E + L MAGF ++AL+T+ N PQ+ASRP+D GRDG
Sbjct: 171 IGHAARMIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKGRDG 229
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
FV+G+G+GV+VLEE EHAK RGAKIYAE+ G+GMSGDA+H+T P DG G LAM A++
Sbjct: 230 FVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMR 289
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359
+ + QV YVNAH TSTP GD E ++ + + L SSTK GHLLGAAG
Sbjct: 290 DANITGTQVGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVL-VSSTKSMTGHLLGAAG 348
Query: 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419
+VEAI VL++ + P T+NL P+ + + +P TA K + + A+ NSFGFGGTN S
Sbjct: 349 SVEAIITVLSLVDQIVPPTINLDDPEEGLDIDLVPHTARK-VDMEYAICNSFGFGGTNGS 407
Query: 420 LLFTKC 425
L+F K
Sbjct: 408 LVFKKI 413
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio harveyi (taxid: 669) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/425 (44%), Positives = 263/425 (61%), Gaps = 25/425 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V+PLG W+ L+ G+ G++ IT FD + +++AA V
Sbjct: 13 VVSPLGNKVSDMWQALLAGKSGVKPIT-------RFDASS-------FPTQIAAEV---- 54
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F+ L+ K R F+ +A+ +A +A D+ L ++ R GV+IG GIG
Sbjct: 55 --RDFDPALVLDLKSIRKTDVFVQFAMESARQAWEDSG-LEINETNAPRVGVAIGSGIGG 111
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + R++SPFFIP +INMASG VS+KY +GPN + VTAC TG H+I
Sbjct: 112 MPWIEKNYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNI 171
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G AARMI D+D M+AGGTE + L + GF RAL+T+ N P++ASRP+D GRDGF
Sbjct: 172 GHAARMIAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTR-NDEPEKASRPWDKGRDGF 230
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+ +V+EELEHAKKR A IYAE+ G+GMSGDA+H+T+P + +G M +L+
Sbjct: 231 VLGEGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRD 290
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+ +VDY+NAH TSTP D +EA AI+ F DHA LA SSTK GH+LGAAGA
Sbjct: 291 AGIAPERVDYINAHGTSTPAADPLEARAIKKTFGDHAY--KLAVSSTKSMTGHMLGAAGA 348
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
+E + +VLAI AP T+NL PD + +F+P +++M I +SNSFGFGGTN +L
Sbjct: 349 LETVISVLAIRDNTAPPTINLENPDEGCDLDFVP-NEAREMKIDTVMSNSFGFGGTNGTL 407
Query: 421 LFTKC 425
+ ++
Sbjct: 408 VLSRV 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 426 | ||||||
| TAIR|locus:2058359 | 461 | AT2G04540 [Arabidopsis thalian | 0.983 | 0.908 | 0.708 | 2.3e-158 | |
| ASPGD|ASPL0000064843 | 430 | AN7489 [Emericella nidulans (t | 0.924 | 0.916 | 0.463 | 1.9e-92 | |
| TIGR_CMR|SPO_2271 | 421 | SPO_2271 "3-oxoacyl-(acyl carr | 0.957 | 0.969 | 0.465 | 4.5e-91 | |
| UNIPROTKB|E1BYY7 | 461 | OXSM "3-oxoacyl-[acyl-carrier- | 0.953 | 0.880 | 0.436 | 5.1e-90 | |
| UNIPROTKB|Q0C090 | 428 | fabF "3-oxoacyl-[acyl-carrier- | 0.955 | 0.950 | 0.459 | 4.1e-88 | |
| UNIPROTKB|E2R866 | 460 | OXSM "3-oxoacyl-[acyl-carrier- | 0.943 | 0.873 | 0.445 | 2.4e-85 | |
| UNIPROTKB|G3V6R7 | 456 | Oxsm "3-oxoacyl-[acyl-carrier- | 0.943 | 0.881 | 0.440 | 1.5e-83 | |
| UNIPROTKB|F1MXW5 | 460 | OXSM "3-oxoacyl-[acyl-carrier- | 0.943 | 0.873 | 0.433 | 1.9e-83 | |
| UNIPROTKB|Q0VCA7 | 460 | OXSM "3-oxoacyl-[acyl-carrier- | 0.943 | 0.873 | 0.433 | 1.9e-83 | |
| MGI|MGI:1918397 | 459 | Oxsm "3-oxoacyl-ACP synthase, | 0.943 | 0.875 | 0.433 | 3.1e-83 |
| TAIR|locus:2058359 AT2G04540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1543 (548.2 bits), Expect = 2.3e-158, P = 2.3e-158
Identities = 299/422 (70%), Positives = 342/422 (81%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
MVTPLG G ETTWRRLI GECGIR +T +DLKM +FD ET+L+ F QL+SKVAA VP G
Sbjct: 40 MVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGS 99
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXX 120
+ GEF+E WLNSK ++A FI YA+CAADEAL DA+WLP+++ +KERTGV
Sbjct: 100 NPGEFDEALWLNSK---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGS 156
Query: 121 XXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
D V+AAQ+ICEKRLRRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSI
Sbjct: 157 ICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSI 216
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGF
Sbjct: 217 GDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGF 276
Query: 241 XXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
HAK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+Q
Sbjct: 277 VIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQ 336
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXX 360
SGL +Q+DYVNAHATSTP+GD VEA AI+TVFS+HATSG+LAFSSTK
Sbjct: 337 SGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGA 396
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAIF++LAIHHGVAP+TLN+ PDPIF+ FMPLT SK M + A+SNSFGFGGTNASL
Sbjct: 397 VEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASL 456
Query: 421 LF 422
LF
Sbjct: 457 LF 458
|
|
| ASPGD|ASPL0000064843 AN7489 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
Identities = 195/421 (46%), Positives = 254/421 (60%)
Query: 8 GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI-SSGEFN 66
G TW+RL+ G CGI I D + + L ++AAVVP G + G +
Sbjct: 30 GVRRTWKRLLDGHCGIVNIRHRDAR------------YADLPCEIAAVVPSGARAEGRWT 77
Query: 67 EDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVD 126
WL+ D R +ARF YA+ AA+EAL DA+W P + Q E TGV + D
Sbjct: 78 ASEWLSKDDERKMARFAQYAMAAAEEALEDAEWKPKAEDQLEATGVCLGSGIGNFDEIYD 137
Query: 127 AAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARM 186
A K ++LSP F+P++LIN+ +GH+SMKYGF GPNH+A TAC TGAHSIGDAAR
Sbjct: 138 AVVAYDTKGYKKLSPLFVPKLLINLGAGHISMKYGFMGPNHSATTACTTGAHSIGDAARF 197
Query: 187 IQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXX 246
I GD+DVM+AGG ES I L++ GF ++R+L T YN P+++SRPFD RDGF
Sbjct: 198 IACGDADVMLAGGAESCIHPLAIGGFARARSLATAYNDRPEKSSRPFDADRDGFVVGEE- 256
Query: 247 XXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306
HAK RGA+IYAEV+GYG SGDAHH+T P +G GA+LAM +ALK + L+
Sbjct: 257 ---------HAKARGARIYAEVKGYGCSGDAHHMTAPKANGGGALLAMKKALKNACLEPS 307
Query: 307 QVDYVNAHATSTPLGDTVEATAIRTVF---SDHATSGSLAFSSTKXXXXXXXXXXXXVEA 363
VDY+NAHATST +GD E AI+ + + + SSTK VEA
Sbjct: 308 AVDYINAHATSTVIGDAAENAAIKALLLGPGGKQKAADVNVSSTKGAIGHLLGGAGAVEA 367
Query: 364 IFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423
+F VLAIH V P T+NL + + F+ N+ P A ++ I AL+NSFGFGGTN+SL F+
Sbjct: 368 LFTVLAIHENVMPPTINLDRLNDGFDFNYAPNEA-QERRIDLALTNSFGFGGTNSSLCFS 426
Query: 424 K 424
K
Sbjct: 427 K 427
|
|
| TIGR_CMR|SPO_2271 SPO_2271 "3-oxoacyl-(acyl carrier protein) synthase II" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 198/425 (46%), Positives = 256/425 (60%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
++TPL G E TW RL+ G+ G IT FD A G +T+ A VP G
Sbjct: 11 LITPLASGVEETWSRLLEGQSGAGPIT-------RFDAV----ASG-VTTTYACEVPRGD 58
Query: 61 SS-GEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXX 119
S G FN D W+ K+ R I FI Y++ AA+ A DA WLP D+ + RTGV
Sbjct: 59 GSDGTFNPDDWMAPKEQRKIEDFILYSIAAAEMACKDANWLPEDEEDRLRTGVLIGSGIG 118
Query: 120 XXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
+ A +I EK RR+SPFFIP LIN+ASG VS+++GF+GPNH+ VTAC+TGAH+
Sbjct: 119 GLGSIAETANLIKEKGPRRVSPFFIPGALINLASGQVSIRHGFKGPNHSVVTACSTGAHA 178
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
IGDA+R+I+ GD+DVM+AGG E+ I + +AGF +AL+TKY P+ ASRP+D RDG
Sbjct: 179 IGDASRIIRAGDADVMIAGGGEACICEIGIAGFNACKALSTKYADNPKAASRPYDADRDG 238
Query: 240 FXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
F HAK RGAKIYAEV GYGMSGDA+HIT P G GA +M AL+
Sbjct: 239 FVMGEGAGIVVLEDYEHAKARGAKIYAEVLGYGMSGDAYHITAPSETGDGAERSMRAALR 298
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXX 359
+GL+ +DY+NAH TST + DT+E A+ + +HA + + SSTK
Sbjct: 299 SAGLEPSDLDYINAHGTST-MADTIELGAVERLLGNHAAN--VTMSSTKSATGHLLGAAG 355
Query: 360 XVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419
+EAIF++LAI VAP T+NL P + P A + I ALSNSFGFGGTNAS
Sbjct: 356 AIEAIFSILAIRDQVAPPTINLDNPAVETPVDLAP-NAKRARKIDVALSNSFGFGGTNAS 414
Query: 420 LLFTK 424
++F K
Sbjct: 415 VIFGK 419
|
|
| UNIPROTKB|E1BYY7 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
Identities = 185/424 (43%), Positives = 257/424 (60%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V+PLG G + W+RL+ G+ GI + E+ + + +VAA VP G
Sbjct: 51 LVSPLGVGTQLVWKRLLQGDSGIASLDGEE--------------YAGVPCRVAACVPRGD 96
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXX 120
G F E+S+++ + +S++ A+ AA+ A+ D+ W P + R GV
Sbjct: 97 EEGHFKEESFVSKSEIKSMSSATVMAIGAAELAMKDSGWSPQSEEDHLRAGVAIGMGMVP 156
Query: 121 XXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ D A + K ++SPFF+P+IL+NMA+GH+S+KY +GPNHA TAC TGAH+I
Sbjct: 157 LEEISDTASLFKTKGYSKVSPFFVPKILVNMAAGHISIKYQLKGPNHAVSTACTTGAHAI 216
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R I GD+DVM+AGGTE+ I LS+AGF ++RAL+T +N +P++A RPFD R+GF
Sbjct: 217 GDSFRFIALGDADVMLAGGTEACISPLSLAGFARARALSTGFNASPKKACRPFDSQREGF 276
Query: 241 XXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
HA +RGA+IYAEV GYG+SGDA HIT P+ +G GA M+ A+K
Sbjct: 277 VMGEGAAVLVLEEYRHAVQRGARIYAEVLGYGLSGDACHITAPNPEGDGAFRCMSAAIKD 336
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXX 360
SG++ V YVNAHATSTPLGD E AI+ +F H S ++A SSTK
Sbjct: 337 SGIKPEDVTYVNAHATSTPLGDAAENQAIKKLFKSH--SHNIAVSSTKGATGHLLGAAGA 394
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
+EA F L+ +H + P TLNL K +P F+ N++PLTA K AL+NSFGFGGTNA
Sbjct: 395 IEAAFTALSCYHAILPPTLNLEKTEPEFDLNYVPLTAQEWKTEKRRVALTNSFGFGGTNA 454
Query: 419 SLLF 422
+L F
Sbjct: 455 TLCF 458
|
|
| UNIPROTKB|Q0C090 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 198/431 (45%), Positives = 251/431 (58%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVP--C 58
+V+PL G E TW RLI G+ G K+ NFD L K+A VP
Sbjct: 13 IVSPLANGREATWERLIAGKSGAG-------KIDNFDAS-------DLPCKIAFQVPWAS 58
Query: 59 GISSGE-----FNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVX 113
G GE F+ D L+SK+ R I FI Y + AADEAL D+ QKER GV
Sbjct: 59 GRGGGEGDEHAFDPDKVLSSKEQRRIDEFILYGIAAADEALADSGLKLETDDQKERAGVM 118
Query: 114 XXXXXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTAC 173
+ + + E R++SPFFIP LIN+ASG +S+++G +GPNH+ VTAC
Sbjct: 119 IGSGIGGLETIYETSITLHEHGPRKVSPFFIPASLINLASGQISIRHGLKGPNHSVVTAC 178
Query: 174 ATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPF 233
ATGAH+IGD+AR+I +GD+DVMVAGG E+ I L +AGFC ++A++T +N TP++ASRP+
Sbjct: 179 ATGAHAIGDSARLISYGDADVMVAGGAEAVIGRLGIAGFCAAKAMSTSFNDTPEKASRPY 238
Query: 234 DCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILA 293
D RDGF HAK RGAKIYAEV GYG++GDAHHIT P +G A
Sbjct: 239 DKDRDGFVMGEGAAVLVLEEYEHAKARGAKIYAEVAGYGLTGDAHHITAPAEGAEGGYRA 298
Query: 294 MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXX 353
M ALK SG+ ++DYVNAH TSTP GD EA A+ F DHA + ++ SSTK
Sbjct: 299 MKMALKNSGIDPAEIDYVNAHGTSTPKGDEGEAGAVERAFGDHAKN--ISMSSTKSAVGH 356
Query: 354 XXXXXXXVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGF 413
+EA F LAI V P TLNL P + +P A K + AA+SNSFGF
Sbjct: 357 LLGAAGAIEAAFCALAIRDQVMPPTLNLDNPSFETVLDLIPHKAKKGR-VRAAMSNSFGF 415
Query: 414 GGTNASLLFTK 424
GGTNASL+ K
Sbjct: 416 GGTNASLVLRK 426
|
|
| UNIPROTKB|E2R866 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 188/422 (44%), Positives = 249/422 (59%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G + W RLI GE GI + E+ K + VAA VP G
Sbjct: 52 LVTPLGVGTQLVWDRLIRGESGIMSLVGEEYK--------------SIPCSVAAYVPRGC 97
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXX 120
G+FNE ++++ D +S++ A+ AA+ A+ D+ WLP + + TGV
Sbjct: 98 DEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMRDSGWLPQSEADQAATGVAIGMGMVP 157
Query: 121 XXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ A M K ++SPFF+P+IL+NMA+G VS++Y +GPNHA TAC TGAH++
Sbjct: 158 LEIVSETALMFQTKGYSKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAV 217
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF
Sbjct: 218 GDSFRFIAQGDADVMVAGGTDSCISPLSLAGFSRARALST--NPDPKLACRPFHPKRDGF 275
Query: 241 XXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
HA +RGA+IYAEV GYG+SGDA HIT P +G+GA+ M A+K
Sbjct: 276 VMGEGAAVLVLEEYDHAVQRGARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAAVKD 335
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXX 360
+G+Q ++ YVNAHATSTPLGD E AI+ +F DHA + LA SSTK
Sbjct: 336 AGVQPEEISYVNAHATSTPLGDAAENKAIKHLFKDHAPA--LAVSSTKGATGHLLGAAGA 393
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
VEA F LA ++ P TLNL +P F+ N++PL A K L+NSFGFGGTNA
Sbjct: 394 VEAAFTALACYYQKLPPTLNLDCTEPEFDLNYVPLKAQEWKIEKRCIGLTNSFGFGGTNA 453
Query: 419 SL 420
+L
Sbjct: 454 TL 455
|
|
| UNIPROTKB|G3V6R7 Oxsm "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 186/422 (44%), Positives = 247/422 (58%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G + W RL+ GE GI + ++ K + VAA VP G
Sbjct: 48 LVTPLGVGTQLVWDRLLRGESGIVSVVGDEYK--------------SIPCSVAAFVPRGS 93
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXX 120
G+FNE ++++ D +S++ A+ AA+ AL D+ W P + + TGV
Sbjct: 94 DKGQFNEQNFVSKSDAKSMSSPTIMAVGAAELALKDSGWYPKLEADQVATGVAIGMGMVP 153
Query: 121 XXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ A M K ++SPFF+P+ILINMA+G VS++Y +GPNH+ TAC TGAH++
Sbjct: 154 LEVVSETALMFQTKGYSKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAV 213
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R+I GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF
Sbjct: 214 GDSFRLIAHGDADVMVAGGTDSCISPLSLAGFSRARALST--NPDPKLACRPFHPERDGF 271
Query: 241 XXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
HA +RGA+IYAEV GYG+SGDA HIT P +G+GA+ M A+K
Sbjct: 272 VMGEGAAVLVLEEHEHAVQRGARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAAVKD 331
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXX 360
+G+ Q+ YVNAHATSTPLGD E AI+ +F DHA + LA SSTK
Sbjct: 332 AGVSPDQISYVNAHATSTPLGDAAENRAIKRLFRDHARA--LAISSTKGATGHLLGAAGA 389
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
VEA F LA +H P TLNL + F+ N++PL A K L+NSFGFGGTNA
Sbjct: 390 VEAAFTALACYHHKLPPTLNLDCTEAEFDLNYVPLEAQEWKTEGRCIGLTNSFGFGGTNA 449
Query: 419 SL 420
+L
Sbjct: 450 TL 451
|
|
| UNIPROTKB|F1MXW5 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 183/422 (43%), Positives = 243/422 (57%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G + W RL+ GE GI + ++ + + VAA VP G
Sbjct: 52 LVTPLGVGTQLVWDRLVRGESGIVSLVGDE--------------YQSIPCSVAAYVPRGC 97
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXX 120
G+FNE +++ D +S++ A+ AA+ AL DA W P + + TGV
Sbjct: 98 DEGQFNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVP 157
Query: 121 XXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ A K ++SPFF+P+IL+NMASG VS+++ +GPNHA TAC TGAH++
Sbjct: 158 LEVISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAV 217
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R + GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF
Sbjct: 218 GDSFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGF 275
Query: 241 XXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
HA +RGA++YAE+ GYG+SGDA HIT P G+GA M A+K
Sbjct: 276 VMGEGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKD 335
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXX 360
+G+Q +V Y+NAHATSTPLGD E AI+ +F DHA LA SSTK
Sbjct: 336 AGIQPEEVSYINAHATSTPLGDAAENKAIKQLFKDHAHV--LAVSSTKGATGHLLGAAGA 393
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
EA F LA +H P TLNL +P F+ N++PL A K AL+NSFGFGGTNA
Sbjct: 394 AEAAFTALACYHRKLPPTLNLDCTEPHFDLNYVPLKAQEWKAENRRIALTNSFGFGGTNA 453
Query: 419 SL 420
+L
Sbjct: 454 TL 455
|
|
| UNIPROTKB|Q0VCA7 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 183/422 (43%), Positives = 243/422 (57%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G + W RL+ GE GI + ++ + + VAA VP G
Sbjct: 52 LVTPLGVGTQLVWDRLVRGESGIVSLVGDE--------------YQSIPCSVAAYVPRGC 97
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXX 120
G+FNE +++ D +S++ A+ AA+ AL DA W P + + TGV
Sbjct: 98 DEGQFNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVP 157
Query: 121 XXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ A K ++SPFF+P+IL+NMASG VS+++ +GPNHA TAC TGAH++
Sbjct: 158 LEVISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAV 217
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R + GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF
Sbjct: 218 GDSFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGF 275
Query: 241 XXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
HA +RGA++YAE+ GYG+SGDA HIT P G+GA M A+K
Sbjct: 276 VMGEGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKD 335
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXX 360
+G+Q +V Y+NAHATSTPLGD E AI+ +F DHA LA SSTK
Sbjct: 336 AGIQPEEVSYINAHATSTPLGDAAENKAIKQLFKDHAHV--LAVSSTKGATGHLLGTAGA 393
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
EA F LA +H P TLNL +P F+ N++PL A K AL+NSFGFGGTNA
Sbjct: 394 AEAAFTALACYHRKLPPTLNLDCTEPHFDLNYVPLKAQEWKAENRRIALTNSFGFGGTNA 453
Query: 419 SL 420
+L
Sbjct: 454 TL 455
|
|
| MGI|MGI:1918397 Oxsm "3-oxoacyl-ACP synthase, mitochondrial" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 183/422 (43%), Positives = 248/422 (58%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G + W RL+ GE GI + ++ K + VAA VP G
Sbjct: 51 LVTPLGVGTQLVWDRLLRGESGIVSVVGDEYK--------------NIPCSVAAYVPRGP 96
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXX 120
G+FNE+++++ D +S++ A+ AA+ AL D+ W P + + TGV
Sbjct: 97 HEGQFNEENFVSKSDAKSMSSSTIMAVGAAELALKDSGWHPKREADQVATGVAIGMGMVP 156
Query: 121 XXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ A + K ++SPFF+P+ILINMA+G VS++Y +GPNH+ TAC TGAH++
Sbjct: 157 LEVISETALLFQTKGYNKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAV 216
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL++ N P+ A RPF RDGF
Sbjct: 217 GDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSS--NPDPKLACRPFHPERDGF 274
Query: 241 XXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
HA +RGA+IYAE+ GYG+SGDA HIT P +G+GA+ M A+K
Sbjct: 275 VMGEGAAVLVLEEHEHAVQRGARIYAEILGYGLSGDAGHITAPDPEGEGALRCMAAAVKD 334
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKXXXXXXXXXXXX 360
+G+ Q+ YVNAHATSTPLGD E AI+ +F DHA + LA SSTK
Sbjct: 335 AGVSPEQISYVNAHATSTPLGDAAENRAIKRLFRDHACA--LAISSTKGATGHLLGAAGA 392
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS--KDMPISAALSNSFGFGGTNA 418
VEA F LA +H P TLNL +P F+ N++PL + K L+NSFGFGGTNA
Sbjct: 393 VEATFTALACYHQKLPPTLNLDCTEPEFDLNYVPLESQEWKAEGRCIGLTNSFGFGGTNA 452
Query: 419 SL 420
+L
Sbjct: 453 TL 454
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q83E37 | FABF_COXBU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.44 | 0.9389 | 0.9661 | yes | no |
| P0AAI8 | FABF_SHIFL | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4386 | 0.9389 | 0.9685 | yes | no |
| Q9NWU1 | OXSM_HUMAN | 2, ., 3, ., 1, ., 4, 1 | 0.4976 | 0.9436 | 0.8758 | yes | no |
| Q8NXE1 | FABF_STAAW | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4305 | 0.9366 | 0.9637 | yes | no |
| P0AAI6 | FABF_ECOL6 | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4386 | 0.9389 | 0.9685 | yes | no |
| O94297 | OXSM_SCHPO | 2, ., 3, ., 1, ., 4, 1 | 0.4836 | 0.9553 | 0.9553 | yes | no |
| O34340 | FABF_BACSU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4564 | 0.9366 | 0.9661 | yes | no |
| Q8L3X9 | KASM_ARATH | 2, ., 3, ., 1, ., 4, 1 | 0.7867 | 0.9835 | 0.9088 | yes | no |
| Q9KQH9 | FABF_VIBCH | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4433 | 0.9413 | 0.9685 | yes | no |
| Q5TKS0 | FABF_STAAU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4323 | 0.9272 | 0.9801 | yes | no |
| Q9CBS7 | FAB1_MYCLE | 2, ., 3, ., 1, ., 4, 1 | 0.3597 | 0.9014 | 0.9230 | yes | no |
| Q99VA6 | FABF_STAAM | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4305 | 0.9366 | 0.9637 | yes | no |
| Q5HHA1 | FABF_STAAC | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4305 | 0.9366 | 0.9637 | yes | no |
| P55338 | FABF_VIBHA | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4436 | 0.9389 | 0.9638 | yes | no |
| P63455 | FAB1_MYCBO | 2, ., 3, ., 1, ., 4, 1 | 0.3542 | 0.9061 | 0.9278 | yes | no |
| P39525 | CEM1_YEAST | 2, ., 3, ., 1, ., 4, 1 | 0.4263 | 0.9507 | 0.9162 | yes | no |
| Q0VCA7 | OXSM_BOVIN | 2, ., 3, ., 1, ., 4, 1 | 0.4881 | 0.9436 | 0.8739 | yes | no |
| Q7A6F8 | FABF_STAAN | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4305 | 0.9366 | 0.9637 | yes | no |
| P63454 | FAB1_MYCTU | 2, ., 3, ., 1, ., 4, 1 | 0.3542 | 0.9061 | 0.9278 | yes | no |
| Q6GIA3 | FABF_STAAR | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4305 | 0.9366 | 0.9637 | yes | no |
| P56902 | FABF_RHIME | 2, ., 3, ., 1, ., 1, 7, 9 | 0.5247 | 0.9530 | 0.9643 | yes | no |
| Q9D404 | OXSM_MOUSE | 2, ., 3, ., 1, ., 4, 1 | 0.4928 | 0.9436 | 0.8758 | yes | no |
| Q6GAU2 | FABF_STAAS | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4305 | 0.9366 | 0.9637 | yes | no |
| Q89AY4 | FABB_BUCBP | 2, ., 3, ., 1, ., 4, 1 | 0.3831 | 0.8215 | 0.8599 | yes | no |
| P43710 | FABB_HAEIN | 2, ., 3, ., 1, ., 4, 1 | 0.3576 | 0.9201 | 0.9655 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.983 |
| 3rd Layer | 2.3.1.179 | 0.946 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 426 | |||
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 0.0 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 0.0 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 0.0 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 0.0 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 0.0 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 1e-175 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 1e-157 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 1e-122 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 1e-116 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 3e-99 | |
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 1e-98 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 1e-91 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 2e-88 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 7e-77 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 1e-76 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 1e-71 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 6e-69 | |
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 4e-68 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 3e-66 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 2e-55 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 2e-53 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 4e-48 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 5e-44 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 1e-42 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 3e-41 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 2e-39 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-30 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 2e-23 | |
| PRK06147 | 348 | PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protei | 1e-06 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 6e-06 | |
| PRK06519 | 398 | PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei | 5e-05 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 2e-04 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 2e-04 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 4e-04 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 4e-04 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 5e-04 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 8e-04 | |
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 8e-04 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 0.001 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 0.004 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 787 bits (2035), Expect = 0.0
Identities = 337/423 (79%), Positives = 377/423 (89%), Gaps = 3/423 (0%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLGCG ETTWRRLI GECG+R +T +DLKM + D ETQL+ QL S+VAA+VP G
Sbjct: 15 LVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGT 74
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
G+F+E+ WLN RS +RFI YALCAADEAL DA+WLPS+ KERTGVSIGGGIGS
Sbjct: 75 GPGDFDEELWLN---SRSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGS 131
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
I+D ++AAQ+ICEKRLRRLSPFF+PRILINMA+GHVS++YGFQGPNHAAVTACATGAHSI
Sbjct: 132 ITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPNHAAVTACATGAHSI 191
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N P EASRPFDC RDGF
Sbjct: 192 GDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRDGF 251
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
VIGEG+GVLVLEELEHAK+RGAKIYAEVRGYGMSGDAHHITQPH DG+GA+LAMTRAL+Q
Sbjct: 252 VIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQ 311
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
SGL +QVDYVNAHATSTPLGD VEA AI+TVFS+HATSG LAFSSTKGA GHLLGAAGA
Sbjct: 312 SGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGA 371
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAIF+VLAIHHG+AP TLNL +PDPIF+D F+PLTASK M I AALSNSFGFGGTNASL
Sbjct: 372 VEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASL 431
Query: 421 LFT 423
LFT
Sbjct: 432 LFT 434
|
Length = 437 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 568 bits (1466), Expect = 0.0
Identities = 222/424 (52%), Positives = 288/424 (67%), Gaps = 25/424 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
V+PLG E+TW+ L+ G+ GI IT +FD L K+A V
Sbjct: 11 AVSPLGNDVESTWKNLLAGKSGIGPIT-------HFDTS-------DLAVKIAGEVK--- 53
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+FN D +++ K+ R + RFI Y + AA +A+ DA +++ +R GV IG GIG
Sbjct: 54 ---DFNPDDYMSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEE-NADRIGVIIGSGIGG 109
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + + EK RR+SPFF+P +INMA+GHVS++YG +GPNH+ VTACATGAH+I
Sbjct: 110 LETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAI 169
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDAAR+I +GD+DVMVAGG E++I L +AGF +RAL+T+ N P+ ASRPFD RDGF
Sbjct: 170 GDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTR-NDDPERASRPFDKDRDGF 228
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+G+LVLEELEHAK RGAKIYAEV GYGM+GDA+H+T P DG+GA AM ALK
Sbjct: 229 VMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKD 288
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+ +DY+NAH TSTP GD E AI+ VF +HA +A SSTK GHLLGAAGA
Sbjct: 289 AGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAY--KVAVSSTKSMTGHLLGAAGA 346
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAIF+VLAI V P T+NL PD + +++P A ++ I ALSNSFGFGGTNASL
Sbjct: 347 VEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPNEA-RERKIDYALSNSFGFGGTNASL 405
Query: 421 LFTK 424
+F +
Sbjct: 406 VFKR 409
|
Length = 411 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 565 bits (1460), Expect = 0.0
Identities = 224/422 (53%), Positives = 282/422 (66%), Gaps = 25/422 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
VTPLG G E W L+ G+ GI IT FD L K+A V
Sbjct: 10 AVTPLGNGVEEFWENLLAGKSGIGPIT-------RFDAS-------DLPVKIAGEVK--- 52
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F+ + +++ K+ R + RFI YAL AA EA+ D+ ++ ER GV IG GIG
Sbjct: 53 ---DFDPEDYIDKKEARRMDRFIQYALAAAKEAVEDSGLDIEEE-DAERVGVIIGSGIGG 108
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + ++ EK RR+SPFFIP +INMA+G +S++YG +GPNHA VTACATG H+I
Sbjct: 109 LETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAI 168
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA R+IQ GD+DVM+AGG E++I L +AGF +AL+T N P++ASRPFD RDGF
Sbjct: 169 GDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALST-RNDDPEKASRPFDKDRDGF 227
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+GVLVLEELEHAK RGAKIYAE+ GYGMSGDA+HIT P +G+GA AM ALK
Sbjct: 228 VMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKD 287
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+ VDY+NAH TSTPLGD E AI+ VF DHA LA SSTK GHLLGAAGA
Sbjct: 288 AGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAY--KLAVSSTKSMTGHLLGAAGA 345
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
+EAIF VLA+ G+ P T+NL PDP + +++P A ++ I ALSNSFGFGG NASL
Sbjct: 346 IEAIFTVLALRDGIVPPTINLDNPDPECDLDYVPNEA-REAKIDYALSNSFGFGGHNASL 404
Query: 421 LF 422
+F
Sbjct: 405 VF 406
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 530 bits (1369), Expect = 0.0
Identities = 214/422 (50%), Positives = 278/422 (65%), Gaps = 25/422 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
VTPLG G E W L+ G GIR IT D S++A VP
Sbjct: 10 AVTPLGNGVEEFWEALLAGRSGIRPITRFD--------------ASGFPSRIAGEVP--- 52
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F+ + +L+ K+ R + RF +AL AA+EAL DA P + ER GV IG GIG
Sbjct: 53 ---DFDPEDYLDRKELRRMDRFAQFALAAAEEALADAGLDPEELD-PERIGVVIGSGIGG 108
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
++ +A + + EK RR+SPFF+P L NMA+G V+++ G +GPN+ TACA+GAH+I
Sbjct: 109 LATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAI 168
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDAAR+I+ G +DV++AGG E+ I L++AGF RAL+T+ + P++ASRPFD RDGF
Sbjct: 169 GDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRND-DPEKASRPFDKDRDGF 227
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+GVLVLE LEHAK RGAKIYAE+ GYG S DA+HIT P DG+GA AM AL
Sbjct: 228 VLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALAD 287
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+GL +DY+NAH TSTPL D E+ AI+ VF +HA + SSTK GHLLGAAGA
Sbjct: 288 AGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAK--KVPVSSTKSMTGHLLGAAGA 345
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAI +LA+ GV P T+NL +PDP + +++P A ++ PI ALSNSFGFGG NASL
Sbjct: 346 VEAIATLLALRDGVLPPTINLEEPDPECDLDYVPNEA-REAPIRYALSNSFGFGGHNASL 404
Query: 421 LF 422
+F
Sbjct: 405 VF 406
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 510 bits (1314), Expect = 0.0
Identities = 214/429 (49%), Positives = 281/429 (65%), Gaps = 14/429 (3%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG GAE+TW LI G+ GIR++T + + E + + A +PC I
Sbjct: 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKAL------ENLVAAMPCQI 54
Query: 61 SSGEFNEDSWLNSKDHRSIA---RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGG 117
++ + + D R +A+ AA EAL DAK + +ER GV+IG G
Sbjct: 55 AAEVDQSE--FDPSDFAPTKRESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSG 112
Query: 118 IGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGA 177
IGS++D D + + EK R+SP+FIP+IL NMA+G V++K+ +GP+ +AVTACATGA
Sbjct: 113 IGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGA 172
Query: 178 HSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237
H IG+A R I++G++D+M+ GGTE+SI +S AGF + RAL TKYN PQ ASRPFD R
Sbjct: 173 HCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232
Query: 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRA 297
GFV+GEG+G+LVLEELEHA +RGAKIYAE+RGYG S DAHHIT PH DG+GA M A
Sbjct: 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENA 292
Query: 298 LKQSG-LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLG 356
LK + + VDYVNAHATSTP+GD +E AI+ VF D L SSTKG +GHLLG
Sbjct: 293 LKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAP-KLYVSSTKGGLGHLLG 351
Query: 357 AAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM-PISAALSNSFGFGG 415
AAGAVE+I +L+++ + P T+NL PD + N + + + I A LS SFGFGG
Sbjct: 352 AAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGG 411
Query: 416 TNASLLFTK 424
N +LLFTK
Sbjct: 412 VNTALLFTK 420
|
Length = 421 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 496 bits (1278), Expect = e-175
Identities = 211/427 (49%), Positives = 275/427 (64%), Gaps = 21/427 (4%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
V+PLGCG ET W+RL+ G+ GIR +T + G L +K+ VP
Sbjct: 13 AVSPLGCGVETFWQRLLAGQSGIRTLTDFPV--------------GDLATKIGGQVPDLA 58
Query: 61 SSGE--FNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGI 118
E F+ D +L+ KD R + RFI +A+ AA EAL A W P +ERT IG G+
Sbjct: 59 EDAEAGFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGV 118
Query: 119 GSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAH 178
G +A + + + RRLSPF IP L NMA+GHVS++YGF+GP A VTACA G
Sbjct: 119 GGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQ 178
Query: 179 SIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238
+IGDAAR+I+ G++DV V GGTE++ID +S+AGF +RAL+T++N P++ASRPFD RD
Sbjct: 179 AIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRD 238
Query: 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRAL 298
GFV+GEG+G+LV+E LEHA RGA AE+ GYG S DA+H+T DG+GA AM AL
Sbjct: 239 GFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIAL 298
Query: 299 KQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAA 358
+Q+G+ +V ++NAHATSTP+GD E AI+ VF LA SSTK A GHLLGAA
Sbjct: 299 RQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVF---GHVSGLAVSSTKSATGHLLGAA 355
Query: 359 GAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND-NFMPLTASKDMPISAALSNSFGFGGTN 417
G VEAIF +LA+ +AP TLNL PDP + + A + M + ALSN FGFGG N
Sbjct: 356 GGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKA-RPMDMDYALSNGFGFGGVN 414
Query: 418 ASLLFTK 424
AS+LF +
Sbjct: 415 ASILFRR 421
|
Length = 424 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 450 bits (1160), Expect = e-157
Identities = 204/427 (47%), Positives = 269/427 (62%), Gaps = 31/427 (7%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V+ LG G E W L+ G+ GIR IT FD L K+A +
Sbjct: 12 IVSSLGNGVEEVWAALLAGKSGIRPIT-------RFDASG-------LGVKIAGEIK--- 54
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ D + K+ R + RF A+ AA EAL DA + R GV+IG GIG
Sbjct: 55 -----DLDDQIAKKERRFMDRFSQLAVVAAVEALEDAGLDN-ELNVDMRVGVAIGSGIGG 108
Query: 121 ISDTVDAA-QMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
+ D ++ E +R+SPF +P++L N+A+G+V++ +G +GPN+ VTACATGAH+
Sbjct: 109 LEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHA 168
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
IGDA R+I+ G +DV++AGG E++I L +AGF RAL+T+ N P++ASRPFD RDG
Sbjct: 169 IGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTR-NDDPEKASRPFDKNRDG 227
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
FVIGEG+G LVLEELEHA RGAKIYAE+ GYG + DA+HIT P DG+GAI AM AL
Sbjct: 228 FVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALA 287
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359
+GL +DY+NAH TSTP D E+ AI+ VF +HA SL SSTK GH LGAAG
Sbjct: 288 DAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHA--KSLPVSSTKSLTGHTLGAAG 345
Query: 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASK--DMPISAALSNSFGFGGTN 417
AVEAI ++LA+ G+ P T+NL PDP D + + ++ + AALSNSFGFGGTN
Sbjct: 346 AVEAIISLLALRDGIIPPTINLDNPDPEAAD--LDVVPNEARTGAVRAALSNSFGFGGTN 403
Query: 418 ASLLFTK 424
ASL+F +
Sbjct: 404 ASLVFKR 410
|
Length = 412 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 361 bits (928), Expect = e-122
Identities = 178/425 (41%), Positives = 261/425 (61%), Gaps = 31/425 (7%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
M+ LG E++++ + GECGI++IT FD ++A +
Sbjct: 11 MINSLGLNKESSFKAICNGECGIKKIT-------LFDAS-------DFPVQIAGEIT--- 53
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F+ ++ K+ + RFI L AA EA+ DA +LP + ER GVS GIG
Sbjct: 54 ---DFDPTEVMDPKEVKKADRFIQLGLKAAREAMKDAGFLPEEL-DAERFGVSSASGIGG 109
Query: 121 ISDTVDAAQMICEKR-LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
+ ++ +IC ++ R++SPFFIP L+NM G +S+++G +GPN ++VTACA G H+
Sbjct: 110 LP-NIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHA 168
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
I +A + I G +D M+ G ES+I + + GF +AL+T+ N P++ASRPFD RDG
Sbjct: 169 IIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTR-NDDPKKASRPFDKDRDG 227
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
FV+GEG+G LVLEE E AKKRGAKIYAE+ G+G SGDA+HIT P + G + AM AL+
Sbjct: 228 FVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPE--GPLRAMKAALE 285
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359
+G + ++DY+NAH TSTP D E A++ +F + SSTKG IGH LGAAG
Sbjct: 286 MAG--NPKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPV--SSTKGQIGHCLGAAG 341
Query: 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419
A+EA+ +++A+ G+ P T+N PDP + +++P A K ++ +SNSFGFGGTN
Sbjct: 342 AIEAVISIMAMRDGILPPTINQETPDPECDLDYIPNVARK-AELNVVMSNSFGFGGTNGV 400
Query: 420 LLFTK 424
++F K
Sbjct: 401 VIFKK 405
|
Length = 406 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 344 bits (884), Expect = e-116
Identities = 189/424 (44%), Positives = 264/424 (62%), Gaps = 23/424 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
M++P+G E++W+ L+ G+ GI I E NF +++ A +V
Sbjct: 13 MLSPVGNTVESSWKALLAGQSGIVNI--EHFDTTNF------------STRFAGLVK--- 55
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+FN + +++ KD R + FI Y + A +AL D+ L + R GV+IG GIG
Sbjct: 56 ---DFNCEEYMSKKDARKMDLFIQYGIAAGIQALDDSG-LEVTEENAHRIGVAIGSGIGG 111
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ Q + EK R++SPFF+P ++NM +G++S+ G +GPN A TAC TG H+I
Sbjct: 112 LGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNI 171
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G AARMI +GD+D MVAGG E + L MAGF ++AL+T+ N PQ+ASRP+D RDGF
Sbjct: 172 GHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGF 230
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+G+G+G++VLEE EHAK RGAKIYAE+ G+GMSGDA+H+T P DG G LAM A++
Sbjct: 231 VLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRD 290
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+ Q+ YVNAH TSTP GD E I+ + + L SSTK GHLLGAAG+
Sbjct: 291 AGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLV-SSTKSMTGHLLGAAGS 349
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAI V+++ + P T+NL P+ + + +P TA K + A+ NSFGFGGTN SL
Sbjct: 350 VEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSL 409
Query: 421 LFTK 424
+F K
Sbjct: 410 IFKK 413
|
Length = 414 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 3e-99
Identities = 161/319 (50%), Positives = 215/319 (67%), Gaps = 3/319 (0%)
Query: 106 QKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGP 165
++ERT IG GIG A + + +RLSPF +P L+N+A+GHVS+K+ F+GP
Sbjct: 24 KQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGP 83
Query: 166 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 225
A VTACA G +IGDA RMI+ ++DV + GG E+ ID +S+AGF +RAL+T +N T
Sbjct: 84 IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNST 143
Query: 226 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 285
P++ASRPFD RDGFV+GEG+G+L++EELEHA RGAK AE+ GYG S DA+H+T
Sbjct: 144 PEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAE 203
Query: 286 DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 345
DG GA AM AL+Q+G+ QV ++NAHATSTP+GD E AI+ +F + S +LA +
Sbjct: 204 DGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE---SNALAIT 260
Query: 346 STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISA 405
STK A GHLLGAAG +E IF VLA+ + P TLNL PDP + ++ ++
Sbjct: 261 STKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTY 320
Query: 406 ALSNSFGFGGTNASLLFTK 424
ALSN FGF G NAS+L +
Sbjct: 321 ALSNGFGFAGVNASILLKR 339
|
Length = 342 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 304 bits (780), Expect = 1e-98
Identities = 170/427 (39%), Positives = 241/427 (56%), Gaps = 33/427 (7%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V+PLG + + L+ G GI EI D Q +++A +
Sbjct: 138 VVSPLGHDPDVFYNNLLEGVSGISEIERFDCS--------------QFPTRIAGEIK--- 180
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPS--DQGQKERTGVSIG--- 115
F+ D W+ K + + +F+ Y L A +AL D + K + GV IG
Sbjct: 181 ---SFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAM 237
Query: 116 GGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACAT 175
GG+ +D ++A ++ R+++PF +P NM S ++M G+ GPN++ TACAT
Sbjct: 238 GGMKVFNDAIEALRI----SYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACAT 293
Query: 176 GAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 235
I +AA I G++DVM+ GG++++I + + GF RAL+ + N P +ASRP+D
Sbjct: 294 SNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQR-NDDPTKASRPWDM 352
Query: 236 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMT 295
RDGFV+GEG+GVL+LEELEHAKKRGA IYAE G + DA+H+T+PH +G G IL +
Sbjct: 353 NRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIE 412
Query: 296 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLL 355
+AL QSG+ V+Y+NAHATST GD E A+ F + L +STK IGHLL
Sbjct: 413 KALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNP---ELRVNSTKSMIGHLL 469
Query: 356 GAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGG 415
GAAGAVEAI V AI G +NL P+ + + + + I ALSNSFGFGG
Sbjct: 470 GAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGG 529
Query: 416 TNASLLF 422
N+S+LF
Sbjct: 530 HNSSILF 536
|
Length = 540 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 282 bits (723), Expect = 1e-91
Identities = 146/355 (41%), Positives = 210/355 (59%), Gaps = 20/355 (5%)
Query: 77 RSIARFI----AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQ-MI 131
R + RF+ AYA A ++A+ DA L +Q RTG+ G G GS + V+AA M
Sbjct: 62 RKVMRFMGDASAYAYLAMEQAIADAG-LSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMR 120
Query: 132 CEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGD 191
+ +R+ P+ + + + + S ++ + +G N++ +ACAT AH IG+A IQ G
Sbjct: 121 GPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGK 180
Query: 192 SDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVL 251
D++ AGG E +S F AL+TKYN TP++ASR +D RDGFVI G GV+V+
Sbjct: 181 QDIVFAGGGEELDWEMSCL-FDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVV 239
Query: 252 EELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 311
EELEHA RGAKIYAE+ GYG + D + + P G+GA+ M AL + + + +DY+
Sbjct: 240 EELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMAL--ATVDT-PIDYI 294
Query: 312 NAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 371
N H TSTP+GD E AIR VF D + A S+TK GH LGAAG EAI+++L +
Sbjct: 295 NTHGTSTPVGDVKELGAIREVFGDKSP----AISATKSLTGHSLGAAGVQEAIYSLLMME 350
Query: 372 HGVAPLTLNLAKPDPIFNDNFMPL--TASKDMPISAALSNSFGFGGTNASLLFTK 424
HG + N+ + DP MP+ + + ++ +SNSFGFGGTNA+L+F +
Sbjct: 351 HGFIAPSANIEELDPQAAG--MPIVTETTDNAELTTVMSNSFGFGGTNATLVFRR 403
|
Length = 406 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 2e-88
Identities = 149/428 (34%), Positives = 214/428 (50%), Gaps = 35/428 (8%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
M T L AETTW+ L+ G+ GIR + +D + FD ++ G L
Sbjct: 21 MTTALATDAETTWKLLLDGQSGIRTL--DDPFVEEFDLPVRIG--GHLLE---------- 66
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
D L + R ++ + +A S + R VSIG G+GS
Sbjct: 67 -----EFDHQLTRVELRRMSYLQRMSTVLGRRVWENAG---SPEVDTNRLMVSIGTGLGS 118
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ V A + + LR +SP + + N + V ++ + V+ACA+G+ +I
Sbjct: 119 AEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAI 178
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
A R I G++D+ + GG E+ I+A+ +AGF + R + + N P A RPFD RDGF
Sbjct: 179 AQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGF 238
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V GEG ++V+E EHAK RGA I A + G ++ D H+ P +G+ A AMTRA++
Sbjct: 239 VFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIEL 298
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+GL +D+VNAHAT T +GD E AI H A + K A+GH +GA GA
Sbjct: 299 AGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHRP----AVYAPKSALGHSVGAVGA 354
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMP----ISAALSNSFGFGGT 416
VE+I VLA+ GV P TLNL DP + L P A++NSFGFGG
Sbjct: 355 VESILTVLALRDGVIPPTLNLENLDPEID-----LDVVAGEPRPGNYRYAINNSFGFGGH 409
Query: 417 NASLLFTK 424
N +L F +
Sbjct: 410 NVALAFGR 417
|
Length = 418 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 244 bits (626), Expect = 7e-77
Identities = 151/437 (34%), Positives = 210/437 (48%), Gaps = 51/437 (11%)
Query: 2 VTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGIS 61
VT LG G W L GE GI IT F E L +++A V
Sbjct: 21 VTSLGQGKADNWAALTAGESGIHTIT-------RFPTEG-------LRTRIAGTV----- 61
Query: 62 SGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQG---------------Q 106
+F +S + A A A AA+EAL A D
Sbjct: 62 --DFLPESPFGA-----SALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPA 114
Query: 107 KERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPN 166
+ ++G +D +++ R R R + ++ ++G +G
Sbjct: 115 RFALAAAVGD-----NDAPSYDRLLRAARGGRFDALH-ERFQFGSIADRLADRFGTRGLP 168
Query: 167 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 226
+ TACA+GA +I I+ G++D + T+ S+ A ++ F AL+T+ N P
Sbjct: 169 ISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQ-NDPP 227
Query: 227 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID 286
++AS+PF RDGFV+ EG+G LVLE LE A RGAKI V G G D+ H T+ D
Sbjct: 228 EKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPD 287
Query: 287 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSS 346
G AI A+ AL +GL Q+DY+NAH TSTP D +E + VF + S+ SS
Sbjct: 288 GSPAIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERL--ASIPVSS 345
Query: 347 TKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAA 406
K IGH L AAGAVEA+F++L I G P T+N PDP + +P ++D ++A
Sbjct: 346 NKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVP-NVARDARVTAV 404
Query: 407 LSNSFGFGGTNASLLFT 423
LSNSFGFGG NASL+ T
Sbjct: 405 LSNSFGFGGQNASLVLT 421
|
Length = 425 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 1e-76
Identities = 143/428 (33%), Positives = 205/428 (47%), Gaps = 42/428 (9%)
Query: 2 VTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGIS 61
VT LG +T RL G +R +M +DR L+ ++AA +
Sbjct: 12 VTALGEDWQTIAARLKAGRNAVR-------RMPEWDRYDGLNT------RLAAPID---- 54
Query: 62 SGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSI 121
+F + K RS+ R A A++ AL DA L R G++ G GS
Sbjct: 55 --DFELPAHYTRKKIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGST 112
Query: 122 SDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIG 181
M+ E + ++ R++ + + +V + +G +G +AC +G+ IG
Sbjct: 113 DPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIPTSSACTSGSQGIG 172
Query: 182 DAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRAL-------TTKYNGTPQEASRPFD 234
A I++G VM+AGG E C + A T+ N P+ RPFD
Sbjct: 173 YAYEAIKYGYQTVMLAGGAEE---------LCPTEAAVFDTLFATSTRNDAPELTPRPFD 223
Query: 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAM 294
RDG VIGEG+G LVLEELEHAK RGA IYAE+ G+G + D H+TQP + +AM
Sbjct: 224 ANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQ--IAM 281
Query: 295 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHL 354
ALK +GL + YVNAH T+T GD E+ A VF + SS K GH
Sbjct: 282 ELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA-----RMPISSLKSYFGHT 336
Query: 355 LGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFG 414
LGA GA+EA ++ ++ G TLNL + DP + ++++ +SN+F FG
Sbjct: 337 LGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFG 396
Query: 415 GTNASLLF 422
G N SL+F
Sbjct: 397 GINTSLIF 404
|
Length = 405 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 1e-71
Identities = 110/274 (40%), Positives = 162/274 (59%), Gaps = 16/274 (5%)
Query: 147 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 206
L + A+ + + G QGP A + ACATG +I +IQ G ++AG E+ I
Sbjct: 120 TLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITP 179
Query: 207 LSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYA 266
L++AGF + AL + + PFD R+G V+GEG +LVLE E A+KRGAKIY
Sbjct: 180 LTLAGFQQMGALA-------KTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYG 232
Query: 267 EVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEA 326
++ G+G++ DA+H++ P DGK AI A+ + L +SGL +DY++AH T+T L D EA
Sbjct: 233 QILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREA 292
Query: 327 TAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 386
I+ +F +A SSTKGA GH LGA+GA+ F++LA+ H P + L +P+
Sbjct: 293 NLIQALFPH-----RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPE- 346
Query: 387 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
F+ NF + ++ P+ L SFGFGG NA++
Sbjct: 347 -FDLNF--VRQAQQSPLQNVLCLSFGFGGQNAAI 377
|
Length = 381 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 223 bits (571), Expect = 6e-69
Identities = 137/427 (32%), Positives = 197/427 (46%), Gaps = 38/427 (8%)
Query: 2 VTPLGCGAETT---WRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPC 58
V+P G G + W L G GI + + VA +P
Sbjct: 11 VSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRF---------------DRGVAGQIPT 55
Query: 59 GISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGI 118
G G +K + R AL A +EAL DA + GV +G G+
Sbjct: 56 GDIPGWD-------AKRTGIVDRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGM 108
Query: 119 GSISDTVDAAQMICEKRLRRLSPFFIPR--ILINMASGHVSMKYGF-QGPNHAAVTACAT 175
G + + + R ++P+ P+ + N +G V++ GP V ACAT
Sbjct: 109 GGL----RFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACAT 164
Query: 176 GAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 235
++ A I+ G +D++V GG E ++ ++GF AL+T P+E SRPFD
Sbjct: 165 ALEALDLAVEAIRSGKADIVVVGGVEDPLE-EGLSGFANMGALSTAEEE-PEEMSRPFDE 222
Query: 236 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMT 295
RDGFV EG+GVLVLE E A RGA IY V G + D + P GKG A+
Sbjct: 223 TRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVP-AGGKGIARAIR 281
Query: 296 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLL 355
AL ++GL +D ++AH TSTP D E+ AI V L ++ K GH
Sbjct: 282 TALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALG--APLPVTAQKALFGHSK 339
Query: 356 GAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD-MPISAALSNSFGFG 414
GAAGA++ I A+ ++ HG+ P T NL DP + + + + AAL N+FGFG
Sbjct: 340 GAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFG 399
Query: 415 GTNASLL 421
G+NA+L+
Sbjct: 400 GSNAALV 406
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 4e-68
Identities = 110/344 (31%), Positives = 161/344 (46%), Gaps = 28/344 (8%)
Query: 89 AADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 148
A EAL DA + P + RTGV +G S SD + + + +
Sbjct: 94 VAWEALEDAGYSP-ESLAGSRTGVFVGA---SSSDY----LELLARDPDEIDAYAATGTS 145
Query: 149 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS 208
+ +S + +GP+ TAC++ ++ A + ++ G+ D+ + GG +
Sbjct: 146 RAFLANRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDM 205
Query: 209 MAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEV 268
GF K+ L+ P RPFD DG+V GEG GV+VL+ L A + G +IYA +
Sbjct: 206 FVGFSKAGMLS------PDGRCRPFDADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVI 259
Query: 269 RGYGMS--GDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEA 326
RG ++ G IT P G+ + RA ++G+ +DYV AH T TPLGD +E
Sbjct: 260 RGSAVNQDGRTKGITAPS--GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEV 317
Query: 327 TAIRTVFS-DHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 385
A+ VF + L S K IGHL AAG I VLA+ HGV P L+ P+
Sbjct: 318 EALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPN 377
Query: 386 PIFNDNFMPLTA--------SKDMPISAALSNSFGFGGTNASLL 421
P + PL + P A + +SFGFGGTNA ++
Sbjct: 378 PKIDFEESPLRVPTEARPWPAPAGPRRAGV-SSFGFGGTNAHVI 420
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 3e-66
Identities = 101/262 (38%), Positives = 139/262 (53%), Gaps = 21/262 (8%)
Query: 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 220
G GP + TAC++ A A R+++ G D + GG +S + L++ GF S +
Sbjct: 148 GLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGF-NSLESLS 205
Query: 221 KYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHI 280
+ RPF RDG IGE + +LE R + G G S DAHH+
Sbjct: 206 P------QPCRPFSANRDGINIGEAAAFFLLE-------REDDAAVALLGVGESSDAHHM 252
Query: 281 TQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG 340
+ PH +G GAILAM +AL +GL + Y+N H T+TPL D +E+ A+ VF D
Sbjct: 253 SAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDG---- 308
Query: 341 SLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400
+ SSTKG GH LGAAGAVEA LA+ HG+ P N +PDP ++ + ++
Sbjct: 309 -VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYL-VENAQA 366
Query: 401 MPISAALSNSFGFGGTNASLLF 422
+ I LSNSF FGG N SL+F
Sbjct: 367 LAIRYVLSNSFAFGGNNCSLIF 388
|
Length = 392 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 2e-55
Identities = 127/430 (29%), Positives = 186/430 (43%), Gaps = 44/430 (10%)
Query: 2 VTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGIS 61
V+ +G G + L+ G M R+ A L S
Sbjct: 12 VSAIGQGRPSFAAALLAGRHAFG-------VMRRPGRQVPDDAGAGLASAFIG------- 57
Query: 62 SGEFNEDSWLNSKDHRSIARFIAY----ALCAADEALHDAKWLPSDQGQKERTGVSIGGG 117
E + + D + R + AL AA EA DA P D +R G+ +GG
Sbjct: 58 -AELDSLALPERLD-AKLLRRASLSAQAALAAAREAWRDAALGPVD---PDRIGLVVGGS 112
Query: 118 IGSISDTVDAAQMICEKRLRRLSPFFIPR-ILINMASGHV---SMKYGFQGPNHAAVTAC 173
+ + R F P L M + V S ++G +G A
Sbjct: 113 NLQQREQALVHE-----TYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGAS 167
Query: 174 ATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRAL-TTKYNGTPQEASRP 232
A+G ++ AAR++Q G D +A G + A+ + ++ P+ A RP
Sbjct: 168 ASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRP 227
Query: 233 FDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAIL 292
FD RDGF+ GE G +VLE E A++RGA+ YA++ G+ M DA+ P ++G+
Sbjct: 228 FDQDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMR-- 285
Query: 293 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIG 352
+ AL+++GL +DYVN H T +PLGD E A+ HA ++TK G
Sbjct: 286 VIRAALRRAGLGPEDIDYVNPHGTGSPLGDETELAALFASGLAHAW-----INATKSLTG 340
Query: 353 HLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP-DPIFNDNFMPLTASKDMPISAALSNSF 411
H L AAG VE I +L + G + NL +P D F ++ TA I ALS SF
Sbjct: 341 HGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERF--RWVGSTAES-ARIRYALSLSF 397
Query: 412 GFGGTNASLL 421
GFGG N +L+
Sbjct: 398 GFGGINTALV 407
|
Length = 410 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 2e-53
Identities = 114/341 (33%), Positives = 167/341 (48%), Gaps = 19/341 (5%)
Query: 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 140
AA+ A+ DA L + + GV +G G GS Q+ +R +
Sbjct: 10 YVSILGFEAAERAIADAG-LSREYQKNPIVGVVVGTGGGS-----PRFQVFGADAMRAVG 63
Query: 141 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 200
P+ + + + ASG ++ G GP + ACA H++ AA +Q G D+++AGG+
Sbjct: 64 PYVVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGS 123
Query: 201 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 260
E A M + + TP++ASR FD DGFV G+G+G LV+EELEHA R
Sbjct: 124 E--ELAAPMDCEFDAMGALS----TPEKASRTFDAAADGFVFGDGAGALVVEELEHALAR 177
Query: 261 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320
GA IYAE+ G + D + +G A AL +GL +DY+ AH T TP+
Sbjct: 178 GAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPI 237
Query: 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 380
GD E +R+ F D S A S+TK G+L AA + AVL + HG P +++
Sbjct: 238 GDVKELKLLRSEFGDK----SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIH 293
Query: 381 LAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 421
+ + D +T + + AL N FG GGTNA+L+
Sbjct: 294 IEELDE---AGLNIVTETTPRELRTALLNGFGLGGTNATLV 331
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 163 bits (416), Expect = 4e-48
Identities = 78/261 (29%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
P G G E W L+ G IRE + + S+VA +
Sbjct: 11 CRFPGGVGPEEFWELLLAGRDAIREFPADLSGL-------------YPPSRVAGEIYG-- 55
Query: 61 SSGEFNEDSWLNSKDHRSIA---RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGG 117
F+ D+ R AL AA EAL DA P+ +RTGV +G G
Sbjct: 56 ----FDFDAAFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSDRTGVFVGSG 111
Query: 118 IGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGA 177
G D + + RR+SP+ + ++A+G +S + G +GP+ TAC++
Sbjct: 112 SG---DYAELQALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSS- 167
Query: 178 HSIGDAA-RMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236
AA R I+ G+ D+ +AGG E+ + AGF + AL + P +A PF
Sbjct: 168 LVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDG--PCKAFDPFA-- 223
Query: 237 RDGFVIGEGSGVLVLEELEHA 257
DGFV GEG G ++L+EL A
Sbjct: 224 -DGFVRGEGVGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 5e-44
Identities = 124/443 (27%), Positives = 190/443 (42%), Gaps = 54/443 (12%)
Query: 1 MVTPLGC---GA---ETTWRRLIVGECGIREITPEDLKM-GNFDRETQLHAFGQLTSKVA 53
+ + C GA E W L G I E+ + + +D + G+ S+
Sbjct: 7 AIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDP--TVPGKSYSRWG 64
Query: 54 AVVPC--GISSGEFNEDSWLNSKDHRSI---ARFIAYALCAADEALHDAKWLPSDQGQKE 108
+ + F ++ ++ ++ R + L A EAL DA P D +
Sbjct: 65 GFLDDVDDFDALFFG----ISPREAEAMDPQQRLL---LEVAWEALEDAGIYP-DSLRGS 116
Query: 109 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHA 168
TGV G + + A + I ++A+G +S G GP+
Sbjct: 117 ATGVFAGASVADYLLLLLAD-------DEAEPEYAITGNSSSVAAGRISYVLGLSGPSVT 169
Query: 169 AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 228
TAC++ ++ A + ++ G+ D+ +AGG + S F L+ P
Sbjct: 170 VDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS------PDG 223
Query: 229 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHID 286
+ FD DG+V GEG+GV+VL+ L A++ G +IYA +RG ++ D +T P +
Sbjct: 224 RCKAFDADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAP--N 281
Query: 287 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSS 346
+ + AL +G+ V YV AH T TPLGD +EA A+ V+ + A + A S
Sbjct: 282 LEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGS 341
Query: 347 TKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFM-----------PL 395
K IGHL AAG I LA+ HG P TL+ P+P +F P
Sbjct: 342 VKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNP--EIDFDSSPFVVPTEATPW 399
Query: 396 TASKDMPISAALSNSFGFGGTNA 418
P A +S SFGFGGTNA
Sbjct: 400 PTGGG-PRRAGVS-SFGFGGTNA 420
|
Length = 1061 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 1e-42
Identities = 54/118 (45%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 265 YAEVRGYGMSGD-AHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 323
YA +RG ++ D A H +G A+ AL +GL VDYV AH T TPLGD
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 324 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNL 381
+EA A++ VF S L S K IGHL AAG I AVLA+ HGV P TLNL
Sbjct: 61 IEAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNL 118
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 3e-41
Identities = 118/426 (27%), Positives = 180/426 (42%), Gaps = 44/426 (10%)
Query: 2 VTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGIS 61
V P G G E W+ ++ G G+ IT D +++A VP
Sbjct: 11 VAPNGLGVEEYWKAVLDGRSGLGPITRFDP--------------SGYPARLAGEVP-DFD 55
Query: 62 SGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSI 121
+ E L D R AL AAD AL DA P+ + GV G
Sbjct: 56 AAEHLPGRLLPQTD-----RMTRLALAAADWALADAGVDPAALPPYDM-GVVTASAAGGF 109
Query: 122 SDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIG 181
Q + K R +S + + +G +S+++G +GP+ V A G ++
Sbjct: 110 EFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVVVAEQAGGLDALA 169
Query: 182 DAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 241
A R+++ G + ++V+GG +S++ S L+T + P A PFD G+V
Sbjct: 170 QARRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLST--SDDPARAYLPFDAAAAGYV 226
Query: 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAIL--AMTRALK 299
GEG +LVLE+ A++RGA++Y E+ GY + D P G+ L A+ AL
Sbjct: 227 PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDP-----PPGSGRPPGLARAIRLALA 281
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359
+GL VD V A A P D EA A+ VF + ++ K G L
Sbjct: 282 DAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFG----PRGVPVTAPKTMTGRLYAGGA 337
Query: 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSF----GFGG 415
++ A+LA+ GV P T+N+ P + L P AAL + G GG
Sbjct: 338 PLDVATALLALRDGVIPPTVNVTDVPPAY-----GLDLVTGRPRPAALRTALVLARGRGG 392
Query: 416 TNASLL 421
N++L+
Sbjct: 393 FNSALV 398
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 2e-39
Identities = 112/369 (30%), Positives = 168/369 (45%), Gaps = 48/369 (13%)
Query: 86 ALCAADEALHDAKWLPSDQGQKERTGVSIG-GGIGSISDTVDA----------------- 127
+L A E L+DA LP +++ G+++G GG S +++A
Sbjct: 97 SLVVAKEVLNDAG-LPDGY-DRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVE 154
Query: 128 ---AQMICEKRLRRLSPF---FIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIG 181
++M+ +K + + P L N+ SG ++ ++ G N ACA +I
Sbjct: 155 DEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIR 214
Query: 182 DAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 241
A + G S++M+ GG + F K+ A TT E +PFD G +
Sbjct: 215 MALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTT------NEDIQPFDIDSKGMM 268
Query: 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHIDGKGAILAMTRALK 299
IGEG G++ L+ LE A++ G +IYA ++G G S D I P +G+ A+ RA
Sbjct: 269 IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAK--ALKRAYD 326
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS-DHATSGSLAFSSTKGAIGHLLGAA 358
+G H + AH T T GD E + +VFS D+ +A S K IGH A
Sbjct: 327 DAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTA 386
Query: 359 GAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMP----------LTASKDMPISAALS 408
G I AVLA+HH V P T+N+ +P+P + P + P A +S
Sbjct: 387 GTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGIS 446
Query: 409 NSFGFGGTN 417
SFGFGGTN
Sbjct: 447 -SFGFGGTN 454
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-30
Identities = 76/272 (27%), Positives = 109/272 (40%), Gaps = 66/272 (24%)
Query: 152 ASGHVSMKYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 210
A+G ++ G GP ++ ACATG ++ A + +Q G +D+++AGG+E
Sbjct: 46 AAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------- 97
Query: 211 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 270
FV G+G+ V+E EHA +RGA AE+
Sbjct: 98 -----------------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS 128
Query: 271 YGMSGD-AHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI 329
+ D A + G+G A +AL+ +GL +DYV AH T TP+GD VE
Sbjct: 129 TAATFDGASMVPAV--SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALG 186
Query: 330 RTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 389
S A S+T GH LGAAG +L + H P T
Sbjct: 187 LDPDGVR----SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT----------- 231
Query: 390 DNFMPLTASKDMPISAALSNSFGFGGTNASLL 421
L FG GGTNA+++
Sbjct: 232 ----------PREPRTVLLLGFGLGGTNAAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 99.3 bits (249), Expect = 2e-23
Identities = 70/261 (26%), Positives = 103/261 (39%), Gaps = 70/261 (26%)
Query: 171 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 230
TAC++ ++ A + ++ G+ D+ +AGG + + G ++ L+ P
Sbjct: 95 TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGLSRAGMLS------PDGRC 148
Query: 231 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHHITQPHIDGK 288
+ FD DG+V GEG GV+VL+ L A + G I A +RG + G ++ IT P +
Sbjct: 149 KTFDASADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGITAPSGPAQ 208
Query: 289 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK 348
I GS+ K
Sbjct: 209 LLI------------------------------------------------GSV-----K 215
Query: 349 GAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI---FNDNFMPLT-----ASKD 400
IGHL AAG I VLA+ HGV P TL+ P+P T
Sbjct: 216 SNIGHLEAAAGVAGLIKVVLALKHGVIPPTLHFETPNPHIDLEESPLRVPTELTPWPPPG 275
Query: 401 MPISAALSNSFGFGGTNASLL 421
P A + +SFGFGGTNA ++
Sbjct: 276 RPRRAGV-SSFGFGGTNAHVI 295
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|235715 PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 20/139 (14%)
Query: 176 GAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 235
GA ++ A R+I G ++ G +S + ++A + L T N
Sbjct: 136 GAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS----------- 184
Query: 236 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPH---IDGKGAIL 292
+GF+ GE + ++L + G + G G+ + + + + G G
Sbjct: 185 --NGFIPGEAAAAVLLGRPAGGEAPGLPLL----GLGLGREPAPVGESEDLPLRGDGLTQ 238
Query: 293 AMTRALKQSGLQSHQVDYV 311
A+ AL ++G +DY
Sbjct: 239 AIRAALAEAGCGLEDMDYR 257
|
Length = 348 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 6e-06
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 172 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 231
C +G ++ AA+ I G++DV+VAGG ES +S A + +A G
Sbjct: 83 VCGSGLQAVALAAQSIAAGEADVVVAGGVES----MSRAPYLLPKARRGGRLGLNTLDGM 138
Query: 232 PFDCGRDGFV 241
D D F
Sbjct: 139 LDDGLTDPFT 148
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 5e-05
Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 19/142 (13%)
Query: 234 DCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILA 293
GF++G G LVLE EHA+ RGA+ YA + G + L
Sbjct: 233 GEDGGGFILGSGGAFLVLESREHAEARGARPYARISG---------VESDRARRAPGDLE 283
Query: 294 --MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAI 351
+ R LK +G + V + AT ATA + A +G
Sbjct: 284 ASLERLLKPAGGLA-APTAVISGATGAH-----PATAEEKAALEAALAG--PVRGIGTLF 335
Query: 352 GHLLGAAGAVEAIFAVLAIHHG 373
GH + A + A L++ G
Sbjct: 336 GHTMEAQFPLGLALAALSVSKG 357
|
Length = 398 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 29/138 (21%)
Query: 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 301
I +G+ +VL E + A+ RG K A + GY +G P G G + A +AL+++
Sbjct: 251 INDGAAAVVLAEADAAEARGLKPLARLVGYAHAG-----VDPEYMGIGPVPATQKALERA 305
Query: 302 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHL 354
GL +D + A+ EA A + A + L K I GH
Sbjct: 306 GLTVADLDVIEAN----------EAFAAQAC----AVTRELGLDPAKVNPNGSGISLGHP 351
Query: 355 LGAAGAVEAIFAVLAIHH 372
+GA G AI V A++
Sbjct: 352 VGATG---AIITVKALYE 366
|
Length = 394 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 2e-04
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C +G ++ AA+ I+ GD+D++VAGG ES
Sbjct: 88 CGSGLKAVALAAQAIRAGDADIVVAGGQES 117
|
Length = 393 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 27/122 (22%)
Query: 246 SGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 305
+ VL++ E E AK+ G K A + GY ++G P I G G + A+ +ALK++GL
Sbjct: 249 AAVLLMSE-EKAKELGLKPLARIVGYAVAGVD-----PAIMGIGPVPAIPKALKRAGLTL 302
Query: 306 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHLLGAA 358
+D + + EA A + + L K GAI GH LGA+
Sbjct: 303 DDIDLIEIN----------EAFAAQALACLKE----LGLDPEKVNVNGGAIALGHPLGAS 348
Query: 359 GA 360
GA
Sbjct: 349 GA 350
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 245 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 304
G+ ++L + KK G K A++R +G +G P I GKG + A +AL+++GL
Sbjct: 254 GASYVLLMSKKAVKKYGLKPMAKIRSFGFAG-----VPPAIMGKGPVPASKKALEKAGLS 308
Query: 305 SHQVDY--VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG---AIGHLLGAAG 359
+D +N EA A+ +++ + KG AIGH LGA G
Sbjct: 309 VKDIDLWEIN------------EAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATG 356
Query: 360 A 360
A
Sbjct: 357 A 357
|
Length = 394 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
CA+G ++ AA I+ G++DVM+A G ES
Sbjct: 95 CASGLQAVAMAADRIRVGEADVMIAAGVES 124
|
Length = 399 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 8e-04
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 172 ACATGAHSIGDAARMIQFGDSDVMVAGGTESS 203
CA+G ++ AA++I+ G++DV+VAGG ES
Sbjct: 82 QCASGLQAVILAAQLIRAGEADVVVAGGVESM 113
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 30/128 (23%)
Query: 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 301
I +G+ LVL E A + G ++ A++RGY DA P + LA+ +ALK +
Sbjct: 250 ISDGAAALVLVSGEKALELGLQVIAKIRGY---ADAAQ--APELFTTAPALAIPKALKHA 304
Query: 302 GLQSHQVDY--VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GA--IG 352
GL++ QVDY +N EA ++ + A L K GA +G
Sbjct: 305 GLEASQVDYYEIN------------EAFSVVAL----ANQKLLGLDPEKVNVHGGAVSLG 348
Query: 353 HLLGAAGA 360
H +G +GA
Sbjct: 349 HPIGCSGA 356
|
Length = 394 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 172 ACATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C +G ++ AA+ I+ GD+D++VAGG ES
Sbjct: 85 VCGSGLKAVALAAQAIRAGDADIVVAGGVES 115
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.004
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 172 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 206
ACA+G ++ AA+ I G++DV++AGG E DA
Sbjct: 91 ACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDA 125
|
Length = 392 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 426 | |||
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 100.0 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.95 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.95 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.95 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.95 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.94 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.94 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.94 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.94 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.94 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.94 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.94 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK06158 | 384 | thiolase; Provisional | 99.93 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.93 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.93 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.93 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.93 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.93 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.93 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.93 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.92 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.92 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.91 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.87 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.86 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.86 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.86 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.85 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.81 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 99.81 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.8 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.79 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 99.78 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.76 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.76 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.76 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.75 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.74 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.73 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.69 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.69 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 99.68 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.67 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.64 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.64 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.63 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.59 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.57 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.54 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.52 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.51 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.49 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.46 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.45 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.43 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.42 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.4 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.4 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.39 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.36 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.33 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.29 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.26 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.18 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.14 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.07 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 99.07 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.04 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 98.98 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 98.94 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 98.81 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.54 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.5 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.42 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.42 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.05 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 97.46 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 97.25 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 90.08 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 86.97 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 86.18 | |
| PRK06158 | 384 | thiolase; Provisional | 85.75 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 85.68 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 84.28 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 84.17 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 83.27 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 83.27 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 82.91 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 81.77 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 81.18 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 81.13 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 80.82 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 80.65 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 80.63 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 80.17 |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-86 Score=595.42 Aligned_cols=402 Identities=59% Similarity=0.949 Sum_probs=380.9
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.+++++|++|.+|+|+|+.+..++ +..+|++++|.||. |+.+.|++....++|+
T Consensus 33 ~VTplG~~v~~~w~~Ll~GesGI~~l~~~d--------------~k~~p~~v~g~Ip~------f~~e~~~s~~~~r~ms 92 (440)
T KOG1394|consen 33 AVTPLGNGVHTSWRNLLSGESGISSLEGPD--------------YKSIPFTVAGKIPR------FSVEDYVSKGDERRMS 92 (440)
T ss_pred eeecCCCChHHHHHHhhccccCcccccccc--------------cccCcchheeeccc------cccccccchhhhhhhh
Confidence 589999999999999999999999999877 45788899999997 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCC--CCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPS--DQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~--~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
++.+|++.|+++||+|||+.+. +..+.+++||.+|++++++..+.+..+.+.+.+.++++|+++|..+.|+.+++|++
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 9999999999999999999776 33357899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 159 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 159 ~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
.+||+||+++++++|++|..+|..|.+.|+.|++|++|+||.|..++|..+.+|.+.++|+++ +++|+..+||||.+|+
T Consensus 173 ~~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~-nd~P~~aSRPfD~~Rd 251 (440)
T KOG1394|consen 173 KYGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTR-NDNPQKASRPFDKKRD 251 (440)
T ss_pred hhcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhc-CCCccccCCCCccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998 8889999999999999
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
||++|||++++|||++|+|++||++||+++.|++.++|.+|++.|++++.+...+|++||++|||.|+|||||++|+|+|
T Consensus 252 GFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST 331 (440)
T KOG1394|consen 252 GFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATST 331 (440)
T ss_pred ceeeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccC
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 398 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 398 (426)
+.||..|+.||+++|+.... ..+|++.|+.+||++||+|.++.+..+++++++++||++|++.|++.++++++|+ .+
T Consensus 332 ~~GD~aE~~Ai~~vf~~~~~--~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~-~~ 408 (440)
T KOG1394|consen 332 PLGDAAEAEAIKRVFGEHNI--ASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPL-KA 408 (440)
T ss_pred cCchHHHHHHHHHHhccCCc--ccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccccccccc-cc
Confidence 99999999999999998752 3479999999999999999999999999999999999999999999999998773 33
Q ss_pred CC----CCCcEEEEeccccccceeeeEeeecC
Q 014349 399 KD----MPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 399 ~~----~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
.+ ...|++|+|||||||+|+++++++++
T Consensus 409 ~~~~~~~~~~valsNSFGFGGtNaSl~fa~~~ 440 (440)
T KOG1394|consen 409 SEKKGGNKVRVALSNSFGFGGTNASLCFAKFK 440 (440)
T ss_pred ccccccccceEEEecccccCCcchhheeeecC
Confidence 22 35789999999999999999999874
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-78 Score=590.50 Aligned_cols=401 Identities=46% Similarity=0.797 Sum_probs=370.5
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||+|.++++||++|++|+++|+++++++ ...++.++++++++ ||++.|++++..++|+
T Consensus 13 ~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~--------------~~~~~~~~~g~i~~------~~~~~~~~~~~~~~~d 72 (414)
T PRK08722 13 MLSPVGNTVESSWKALLAGQSGIVNIEHFD--------------TTNFSTRFAGLVKD------FNCEEYMSKKDARKMD 72 (414)
T ss_pred EECCCCCCHHHHHHHHHhCCCeeeecCccc--------------cccCCCceeEEcCC------CChhHcCCHHHHhhcC
Confidence 489999999999999999999999998765 34567889999987 9988888999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+++++++.++++||+|||+++.+. +..|+||++|++.+.+...+.+++.+.+.+...++|+.++..+.|.++++|++.|
T Consensus 73 ~~~~~~l~a~~~Al~dAGl~~~~~-~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (414)
T PRK08722 73 LFIQYGIAAGIQALDDSGLEVTEE-NAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMR 151 (414)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccc-CCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHh
Confidence 999999999999999999976555 4789999999999999888888877777777888999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++++++|+|++.||..|+++|++|++|++||+|+|..+++..+..|..+++++.. +.+|+..|||||.+++|+
T Consensus 152 gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~-~~~p~~~~rpfd~~~~G~ 230 (414)
T PRK08722 152 GLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGF 230 (414)
T ss_pred CCCCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccC-CCCCccccCcCcCCCCce
Confidence 9999999999999999999999999999999999999999999999999999999999754 456778999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++|||++++||+++++|+++|+++|++|.|++.++|+.+++.|++.+.+..++|+++|+++|++|+||||||+|||||+.
T Consensus 231 ~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~ 310 (414)
T PRK08722 231 VLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPA 310 (414)
T ss_pred EeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCC
Confidence 99999999999999999999999999999999999999999998888888999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|.+|..+|+++|+... ..++||+++|+++||+++|+|++++++++++|++++|||++|+++|+|.+++++++ .+.+.
T Consensus 311 ~D~~E~~al~~~fg~~~-~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~-~~~~~ 388 (414)
T PRK08722 311 GDVAEIKGIKRALGEAG-SKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVP-HTARK 388 (414)
T ss_pred CCHHHHHHHHHHhcccC-CCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC-Ccccc
Confidence 99999999999998642 13589999999999999999999999999999999999999999999999999988 55555
Q ss_pred C-CCcEEEEeccccccceeeeEeeec
Q 014349 401 M-PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 401 ~-~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+ ..|++++|+|||||+|+|+||++.
T Consensus 389 ~~~~~~~l~nsfGfGG~n~~lvl~~~ 414 (414)
T PRK08722 389 VESMEYAICNSFGFGGTNGSLIFKKM 414 (414)
T ss_pred CCCCCEEEEecccCCCceEEEEEecC
Confidence 3 689999999999999999999873
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-78 Score=578.82 Aligned_cols=399 Identities=51% Similarity=0.817 Sum_probs=368.1
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.+++++|++|..|+++|++++.++ ...+++++.+.+++ | ..++.++..++|+
T Consensus 12 ~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~--------------~~~~~~~~~~~i~~------~--~~~~~~~~~~~~d 69 (412)
T COG0304 12 IVSSLGNGVEEVWAALLAGKSGIRPITRFD--------------ASGLGVKIAGEIKD------L--DDQIAKKERRFMD 69 (412)
T ss_pred eeecccCCHHHHHHHHhcCCCCCCcccccc--------------ccCCCCcccccccc------c--ccccchHHhhccc
Confidence 589999999999999999999999999887 45677788888876 5 4446777778999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccC-CCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRR-LSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~i~~~ 159 (426)
++++|++.|+.+|++|||+......++ |+|+++|++.++....+.....+...+.++ ++|+.++..+.++.++.++..
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 999999999999999999983332223 999999999999998876555555555444 899999999999999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
||++||++++.++|+|+..||..|+++|+.|++|++||||+|..+++..+.+|..+++|+.. +++|...|||||++++|
T Consensus 149 ~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~-nd~p~~asrPfd~~RdG 227 (412)
T COG0304 149 FGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTR-NDDPEKASRPFDKNRDG 227 (412)
T ss_pred hCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccC-CCCccccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988 88999999999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
|++|||++++|||++++|++||++||++|.|++.+.|++|.+.|.+++.+..++|++||+++|++|+|||||+.|||||+
T Consensus 228 fv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~ 307 (412)
T COG0304 228 FVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTP 307 (412)
T ss_pred EEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC-CCCCCCccccC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI-FNDNFMPLTAS 398 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~-~~~~~~~~~~~ 398 (426)
.||..|..+|+++|+... .+++|++.|+.+||++||+|..+++.++++|+++++||++|++.|+|+ +++++++ +..
T Consensus 308 ~nD~~E~~ai~~vfg~~~--~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~-~~~ 384 (412)
T COG0304 308 ANDKAESLAIKRVFGEHA--KSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLDVVP-NEA 384 (412)
T ss_pred CccHHHHHHHHHHhcccc--cCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccccccccC-Ccc
Confidence 999999999999999765 348999999999999999999999999999999999999999999997 6899998 767
Q ss_pred CCCCCcEEEEeccccccceeeeEeeecC
Q 014349 399 KDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 399 ~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
+...++++++|+|||||+|+++++++++
T Consensus 385 ~~~~~~~~lsnsfGFGG~Na~lv~~~~~ 412 (412)
T COG0304 385 RTGAVRAALSNSFGFGGTNASLVFKRYQ 412 (412)
T ss_pred cccceeEEEecccccCCcceEEEEecCC
Confidence 7666999999999999999999999974
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-77 Score=598.89 Aligned_cols=400 Identities=42% Similarity=0.691 Sum_probs=366.1
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|++++.++ ...++.+++|++++ |+.+.|++++..++|+
T Consensus 138 ~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~--------------~~~~~~~~ag~i~~------f~~~~~l~~k~~r~md 197 (540)
T PLN02787 138 VVSPLGHDPDVFYNNLLEGVSGISEIERFD--------------CSQFPTRIAGEIKS------FSTDGWVAPKLSKRMD 197 (540)
T ss_pred EECCCCCCHHHHHHHHHcCCCcccccCccc--------------hhhCCccccccccc------cChhhcCCHHHHHhCC
Confidence 589999999999999999999999998765 33567778888876 8888889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCC---CCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPS---DQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~---~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 157 (426)
+++++++.++++||+|||+++. ++ ++.|+||++|++.++...+.++++.+. .....++|+.++..+.+..+++|+
T Consensus 198 ~~~~~al~Aa~eAL~dAGl~~~~~~~~-~~~r~GV~vGt~~g~~~~~~~~~~~l~-~~~~~~~p~~~~~~~~n~~a~~ia 275 (540)
T PLN02787 198 KFMLYLLTAGKKALADGGITEDVMKEL-DKTKCGVLIGSAMGGMKVFNDAIEALR-ISYRKMNPFCVPFATTNMGSAMLA 275 (540)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccccc-CCCceEEEEEeccchHHHHHHHHHHHh-hccccCCcchhhhhcccHHHHHHH
Confidence 9999999999999999999753 33 478999999999998887777666543 445678888888888999999999
Q ss_pred HHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 158 MKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 158 ~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
..||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+.|..+..|..+++|+.. +++|...|||||.++
T Consensus 276 ~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~-~~~p~~~~rPFD~~r 354 (540)
T PLN02787 276 MDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQR-NDDPTKASRPWDMNR 354 (540)
T ss_pred HHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhcc-CCCcccccCCcccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999865 566788999999999
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 317 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtg 317 (426)
+||++|||++++|||++++|+++|++||++|.|++.++|++|++.|++++.++.++|++||+++|++|+|||||++||||
T Consensus 355 dGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTG 434 (540)
T PLN02787 355 DGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATS 434 (540)
T ss_pred CCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcccc
Q 014349 318 TPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTA 397 (426)
Q Consensus 318 t~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~ 397 (426)
|+.+|..|..+|+++|+.. .+++|+++|+++||+++|+|++++++++++|++|+|||++|+++|+|.+++++++...
T Consensus 435 T~~gD~~E~~Ai~~~Fg~~---~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~ 511 (540)
T PLN02787 435 TKAGDLKEYQALMRCFGQN---PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPK 511 (540)
T ss_pred CCCCCHHHHHHHHHHhCCC---CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccc
Confidence 9999999999999999864 3589999999999999999999999999999999999999999999999998854245
Q ss_pred CCCCCCcEEEEeccccccceeeeEeeecC
Q 014349 398 SKDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 398 ~~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
++.++++++|+|+|||||+|+++||++++
T Consensus 512 ~~~~~ir~aL~nSfGFGG~Naslvl~~~~ 540 (540)
T PLN02787 512 KERLDIKVALSNSFGFGGHNSSILFAPYK 540 (540)
T ss_pred cccCCcCEEEEeeecCCceeEEEEEEeCC
Confidence 55667999999999999999999999874
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-76 Score=583.42 Aligned_cols=422 Identities=80% Similarity=1.252 Sum_probs=377.0
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||+|.++++||++|++|+++|++++.++|....|+.+........++.+++++++.+.+...||+..|+. .++++
T Consensus 15 ~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~---~~~~~ 91 (437)
T PLN02836 15 LVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEELWLN---SRSSS 91 (437)
T ss_pred EECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChHHhcc---ccccC
Confidence 589999999999999999999999999988765555433333333467888999987533345688877743 35789
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+..+|++.|+++||+|||+.+.+....+++||++|++.+....+.++.+.+.+.+...++|+.++..+.|+++++|+..|
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 99999999999999999997654324689999999999888887777776767677788999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++|++|++||+|+|..+++..+..|..++.++..++.+|...|+|||.+++|+
T Consensus 172 gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~~G~ 251 (437)
T PLN02836 172 GFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRDGF 251 (437)
T ss_pred CCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCCCCe
Confidence 99999999999999999999999999999999999999999989999999999999988766666778999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++|||++++||+++++|+++|+++|++|.|++.++|+.+.+.|.+.++...+++++||++|||+|+||||||+|||||+.
T Consensus 252 ~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~ 331 (437)
T PLN02836 252 VIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPL 331 (437)
T ss_pred eeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcC
Confidence 99999999999999999999999999999999999999999898888888999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|..|..+++++|+.....+.++++++|+++||+.+|+|++++++++++|+++++||++|+++|+|.+++++++...++.
T Consensus 332 ~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~~~~~ 411 (437)
T PLN02836 332 GDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKA 411 (437)
T ss_pred cCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCcccCCCC
Confidence 99999999999998765445689999999999999999999999999999999999999999999999999887444455
Q ss_pred CCCcEEEEeccccccceeeeEeeec
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+.+.+|+|||||||+|+|+||+++
T Consensus 412 ~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 412 MLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CCccEEEEecccCCCeeEEEEEecC
Confidence 6789999999999999999999985
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-76 Score=583.75 Aligned_cols=408 Identities=51% Similarity=0.849 Sum_probs=376.0
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCC--CCCCCCccCCCChhhhhc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI--SSGEFNEDSWLNSKDHRS 78 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~fd~~~~~~~~~~~~ 78 (426)
++||+|.++++||++|++|++++++++.++| ..++.+++|++++.. ..+.||++.|+++++.++
T Consensus 13 ~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~--------------~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~~~~ 78 (424)
T PRK06333 13 AVSPLGCGVETFWQRLLAGQSGIRTLTDFPV--------------GDLATKIGGQVPDLAEDAEAGFDPDRYLDPKDQRK 78 (424)
T ss_pred EECCCCCCHHHHHHHHHcCCCeEEeCCcccc--------------cCCCCceEEEeccccccccccCChhHcCCHHHHhh
Confidence 5899999999999999999999999998773 346677889987510 012388888899999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
|+|+++|++.++++||+|||+++.++.+..++||++|++.+.+..+.++...+...+...++|+.++..+.|.++++|++
T Consensus 79 ~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 158 (424)
T PRK06333 79 MDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSI 158 (424)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHH
Confidence 99999999999999999999987766447899999999999998888888877777888889999999999999999999
Q ss_pred HcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 159 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 159 ~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
.||++||+++++++|+|++.||..|+++|++|++|++||+|+|.++++..+..|..++.++..+..+|+..|+|||.+++
T Consensus 159 ~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~ 238 (424)
T PRK06333 159 RYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRD 238 (424)
T ss_pred HhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999998889999999987667778889999999999
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
|+++||||+++|||++++|+++|+++|++|.|++.++|+++.+.|.+.+.++.++|++||+++|++|+||||||+|||||
T Consensus 239 G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt 318 (424)
T PRK06333 239 GFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATST 318 (424)
T ss_pred CeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCC
Confidence 99999999999999999999999999999999999999999888888888899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC-CCCCcccc
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN-DNFMPLTA 397 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~-~~~~~~~~ 397 (426)
+.+|..|..+++++|+.. .++++++.|+++||+.+|+|++++++++++|++|++||++|+++|+|.++ +++++ ..
T Consensus 319 ~~~D~~E~~al~~~fg~~---~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~-~~ 394 (424)
T PRK06333 319 PVGDLGEVAAIKKVFGHV---SGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVA-NK 394 (424)
T ss_pred ccchHHHHHHHHHHhCCC---CCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccccc-CC
Confidence 999999999999999843 46899999999999999999999999999999999999999999999998 88887 77
Q ss_pred CCCCCCcEEEEeccccccceeeeEeeecC
Q 014349 398 SKDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 398 ~~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
.+.++.+++++|||||||+|+|+||++++
T Consensus 395 ~~~~~~~~al~~s~gfGG~n~~~il~~~~ 423 (424)
T PRK06333 395 ARPMDMDYALSNGFGFGGVNASILFRRWE 423 (424)
T ss_pred CcccCcCEEEEeeecCCCeeEEEEEeccC
Confidence 78888999999999999999999999874
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-75 Score=566.94 Aligned_cols=390 Identities=29% Similarity=0.443 Sum_probs=358.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|+++++++ ...++.++++.+++ ||..++++++..++|+
T Consensus 10 ~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~g~i~~------~~~~~~~~~~~~~~~d 69 (399)
T cd00832 10 VVAPNGLGVEEYWKAVLDGRSGLGPITRFD--------------PSGYPARLAGEVPD------FDAAEHLPGRLLPQTD 69 (399)
T ss_pred EeCCCCCCHHHHHHHHHhCCCeEeeCCccc--------------cccCCCceeEEeCC------cChhhcCCHHHHhhCC
Confidence 589999999999999999999999987654 23456778888886 8887778999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
++++|++.++++||+|||+++..+ ++.|+||++|++.+++...+..+..+...+...++|+.++.++.+..+++|+..|
T Consensus 70 ~~~~~~l~aa~eAl~dAGl~~~~~-~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (399)
T cd00832 70 RMTRLALAAADWALADAGVDPAAL-PPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRH 148 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccc-CCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHh
Confidence 999999999999999999987665 4789999999999998877777777777677788888888999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++++++|+|++.||..|+++|++|+ |++||+|+|..++|..+..|..++.++. ..+|...|||||.+++||
T Consensus 149 gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~--~~~p~~~~rPFd~~~~G~ 225 (399)
T cd00832 149 GMRGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLST--SDDPARAYLPFDAAAAGY 225 (399)
T ss_pred CCCCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCC--CCCCCCCcCCCcCCCCCE
Confidence 9999999999999999999999999999999 9999999999999999999999999874 345678999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++|||++++|||++++|++||+++|++|.|++.++|+.+... .+.++.++|++||+++|++|+|||||++|||||+.
T Consensus 226 ~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~---~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~ 302 (399)
T cd00832 226 VPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSG---RPPGLARAIRLALADAGLTPEDVDVVFADAAGVPE 302 (399)
T ss_pred eeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCC---CHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCC
Confidence 999999999999999999999999999999999999887532 36788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|..|..+|+++|+.. .+||++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+.++
T Consensus 303 ~D~~E~~al~~~fg~~----~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~-~~~~~ 377 (399)
T cd00832 303 LDRAEAAALAAVFGPR----GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVT-GRPRP 377 (399)
T ss_pred CCHHHHHHHHHHhCCC----CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCC-CcccC
Confidence 9999999999999864 488999999999999999999999999999999999999999999999999998 66777
Q ss_pred CCCcEEEEeccccccceeeeEe
Q 014349 401 MPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl 422 (426)
.+.|++++|||||||+|+++||
T Consensus 378 ~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 378 AALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCCEEEEeccCCCCcceEEEC
Confidence 7899999999999999999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-74 Score=567.33 Aligned_cols=397 Identities=36% Similarity=0.566 Sum_probs=361.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||+|.++++||++|++|+++|++++.+++. ...++.++++++++ .||. ++++++.++|+
T Consensus 21 ~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~------------~~~~~~~~~g~i~~-----~~d~--~~~~~~~~~~d 81 (418)
T PRK07910 21 MTTALATDAETTWKLLLDGQSGIRTLDDPFVE------------EFDLPVRIGGHLLE-----EFDH--QLTRVELRRMS 81 (418)
T ss_pred EECCCCCCHHHHHHHHHcCCCeeEeCChhhhh------------ccCCCcceEEEecc-----Cccc--cCCHHHHhhcc
Confidence 47999999999999999999999999865321 12356778888853 2664 37888999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|++++++.++++||+|||+.. . ++.|+||++|++.+.......++..+...+...++|+.++.++.|.++.+++..+
T Consensus 82 ~~~~~~l~aa~~AledAg~~~--~-~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 158 (418)
T PRK07910 82 YLQRMSTVLGRRVWENAGSPE--V-DTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLER 158 (418)
T ss_pred HHHHHHHHHHHHHHHHcCCCC--C-CcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHh
Confidence 999999999999999999842 3 4789999999999999888888877777777788898899999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhh-cccccCCCCCCCCcccccCCCc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRA-LTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~pf~~~~~G 239 (426)
+++||+++++++|+|++.||..|+++|++|++|++||+|+|..+++..+..|..+++ ++.. .++|+..|||||.+++|
T Consensus 159 ~~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~-~~~~~~~~rPFd~~~~G 237 (418)
T PRK07910 159 HAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTN-NDDPAGACRPFDKDRDG 237 (418)
T ss_pred CCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccC-CCCCCCCcCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998 6643 45578899999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+++|||++++|||++++|+++|+++|++|.|++.++|+.+...|++.+.++.++|++||+++|++|+||||||+|||||+
T Consensus 238 ~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~ 317 (418)
T PRK07910 238 FVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTS 317 (418)
T ss_pred EeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCC
Confidence 99999999999999999999999999999999999999998889888888899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASK 399 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~ 399 (426)
.+|.+|..+|+++|+.. .++++++|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+++
T Consensus 318 ~~D~~E~~Al~~~fg~~----~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~-~~~~ 392 (418)
T PRK07910 318 VGDVAEGKAINNALGGH----RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVA-GEPR 392 (418)
T ss_pred CCCHHHHHHHHHHhCCC----CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC-CCCc
Confidence 99999999999999853 367999999999999999999999999999999999999999999999999987 6666
Q ss_pred CCCCcEEEEeccccccceeeeEeeec
Q 014349 400 DMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 400 ~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..+++++++|||||||+|+++||+++
T Consensus 393 ~~~~~~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 393 PGNYRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred CCCccEEEEeeecCCCeeEEEEEecC
Confidence 66789999999999999999999985
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-74 Score=564.12 Aligned_cols=393 Identities=38% Similarity=0.600 Sum_probs=352.4
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|+++++++ ...++.++++.++ |+++.+++++..++++
T Consensus 11 ~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~--------------~~~~~~~~~g~~~-------~~~~~~~~~~~~~~~~ 69 (406)
T PRK07967 11 IVSSIGNNQQEVLASLREGRSGITFSPEFA--------------EMGMRSQVWGNVK-------LDPTGLIDRKVMRFMG 69 (406)
T ss_pred EECCCCCCHHHHHHHHHcCCCceeECCccc--------------ccCCCCceEEEcC-------CChhhcCCHHHhhcCC
Confidence 589999999999999999999999998776 3457788888873 7777777888889999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHH-hhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICE-KRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
+..++++.|+++||+|||+.+.+. +..++||++|++.+........+..+.. .+...++|+.++..+.+.++++|+..
T Consensus 70 r~~~~a~~aa~~Al~dAGl~~~~~-~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 148 (406)
T PRK07967 70 DASAYAYLAMEQAIADAGLSEEQV-SNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATP 148 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccC-CCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHH
Confidence 999999999999999999987665 3689999999998887666555554444 56677889999999999999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
||++||+++++++|+|++.||..|+++|++|++|++||+|+|. +.+.....|..++.++..++.+|+..|||||.+++|
T Consensus 149 ~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G 227 (406)
T PRK07967 149 FKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDG 227 (406)
T ss_pred HCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCc
Confidence 9999999999999999999999999999999999999999997 455556679999999866566788899999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
|++|||++++|||++++|++||++||++|.|++.++|+++++.| ++.++.++|++||+.++ + |||||++|||||+
T Consensus 228 ~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p--~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~ 302 (406)
T PRK07967 228 FVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMALATVD--T-PIDYINTHGTSTP 302 (406)
T ss_pred eeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCC--CHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCC
Confidence 99999999999999999999999999999999999999998877 57788999999998654 5 9999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC-CCCCCccccC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-NDNFMPLTAS 398 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~-~~~~~~~~~~ 398 (426)
.+|.+|..+|+++|+.+ .+||+++|+++||+++|+|++++++++++|++++|||++|+++++|.+ ++++++ +..
T Consensus 303 ~~D~~E~~Ai~~~fg~~----~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~-~~~ 377 (406)
T PRK07967 303 VGDVKELGAIREVFGDK----SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVT-ETT 377 (406)
T ss_pred CCCHHHHHHHHHHhCCC----CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccC-CCC
Confidence 99999999999999754 478999999999999999999999999999999999999999999988 688887 555
Q ss_pred CCCCCcEEEEeccccccceeeeEeeecC
Q 014349 399 KDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 399 ~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
+..+++.+++|||||||+|+|+||++++
T Consensus 378 ~~~~~~~~l~~sfgfGG~n~~lvl~~~~ 405 (406)
T PRK07967 378 DNAELTTVMSNSFGFGGTNATLVFRRYK 405 (406)
T ss_pred cCCCCCEEEEecccCCCeeEEEEEEecC
Confidence 5557899999999999999999999974
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=565.40 Aligned_cols=394 Identities=36% Similarity=0.549 Sum_probs=357.1
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+|+|++++.+++ ...++.++++++++ |+...+++++..++|+
T Consensus 11 ~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~-------------~~~~~~~~~~~v~~------~~~~~~~~~~~~r~~~ 71 (405)
T PRK09116 11 GVTALGEDWQTIAARLKAGRNAVRRMPEWDR-------------YDGLNTRLAAPIDD------FELPAHYTRKKIRSMG 71 (405)
T ss_pred EECCCCCCHHHHHHHHHcCCCCEEeCCchhh-------------ccCCCCceEEEecC------cChhHhcCHHHHhhCC
Confidence 5899999999999999999999999997652 13467889999987 8877778888889999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+.++|++.++++||+|||+...+..++.|+||++|++.+.......+.+.+.+.+...++|..++..++|.++++|++.|
T Consensus 72 ~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 72 RVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 99999999999999999995432224679999999999998888887777776677778888888899999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
+++||+++++++|+|+++||..|+++|++|++|++||||+|. +++.....|..++.++.. ...|...|+|||.+++|+
T Consensus 152 ~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~-~~~~~~~~rPfd~~~~G~ 229 (405)
T PRK09116 152 GLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTR-NDAPELTPRPFDANRDGL 229 (405)
T ss_pred CCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccC-CCCCCCCCCCCcCCCCCE
Confidence 999999999999999999999999999999999999999997 677777788888877643 345677899999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++|||++++|||++++|+++|+++|++|.|++.++|+.+.+.|+ ...+.++|+++|++++++|+|||||++|||||+.
T Consensus 230 v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~--~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~ 307 (405)
T PRK09116 230 VIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQ--AETMQIAMELALKDAGLAPEDIGYVNAHGTATDR 307 (405)
T ss_pred eeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCC--HHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCC
Confidence 99999999999999999999999999999999999998887774 4667899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC-CCCCCccccCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-NDNFMPLTASK 399 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~-~~~~~~~~~~~ 399 (426)
+|..|..+|+++|+. .+||++.|+++||+.+|+|++++++++++|+++++||++|+++|+|+| ++++++ .+++
T Consensus 308 ~D~~E~~Ai~~~fg~-----~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~-~~~~ 381 (405)
T PRK09116 308 GDIAESQATAAVFGA-----RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIM-GEAR 381 (405)
T ss_pred CCHHHHHHHHHHhCC-----CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccC-CCCc
Confidence 999999999999985 378999999999999999999999999999999999999999999999 699998 7777
Q ss_pred CCCCcEEEEeccccccceeeeEee
Q 014349 400 DMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 400 ~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
+.+.+++|+|||||||+|+++||+
T Consensus 382 ~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 382 EIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred cCCCCEEEEeeecCCcccEEEEEC
Confidence 888999999999999999999985
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-74 Score=567.74 Aligned_cols=415 Identities=52% Similarity=0.829 Sum_probs=368.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhh--cccCCCccceeEEeCCCCCCCCCCccCCCChhhhhc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQL--HAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRS 78 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~ 78 (426)
+|||+|.++++||++|++|+++|++++.++|+...+++.... .....+++++++++++ ..||+..|... .+
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~----~~f~~~~~~~~---~~ 73 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ----SEFDPSDFAPT---KR 73 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCc----ccCChhHcCCc---cc
Confidence 699999999999999999999999999988654443321110 1134578899999974 23887766322 24
Q ss_pred cCHHHHHHHHHHHHHHHHcCCC-CCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWL-PSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~-~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 157 (426)
.++.++|++.++++||+|||++ +.++ +..++|+++|++.+.......++..+.+.+...++|+.++..+.|.++++|+
T Consensus 74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~-~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is 152 (421)
T PTZ00050 74 ESRATHFAMAAAREALADAKLDILSEK-DQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVA 152 (421)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCccccc-CcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHH
Confidence 5899999999999999999998 6666 4789999999999888887777777777778888999999999999999999
Q ss_pred HHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 158 MKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 158 ~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
..||++||+++|+++|+|++.||..|+++|++|++|++||+|+|..++|..+..|..++.++..+..+|...|+|||.++
T Consensus 153 ~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 153 IKHKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred HHhCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 99999999999999999999999999999999999999999999988999899999999888655566788999999999
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEecCC
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ-SGLQSHQVDYVNAHAT 316 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~-agl~~~dId~v~~hgt 316 (426)
+|+++||||+++||+++++|+++|+++|++|+|++.++|+.+.+.|.+.+.+..++|++||++ ||++|+||||||+|||
T Consensus 233 ~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgt 312 (421)
T PTZ00050 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHAT 312 (421)
T ss_pred CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCc
Confidence 999999999999999999999999999999999999999999988988888899999999999 9999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccc
Q 014349 317 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLT 396 (426)
Q Consensus 317 gt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~ 396 (426)
||+.+|.+|..++.++|+... ..+++|++.|+++||+++|||++++++++++|+++++||++|+++|+|.+++++++ .
T Consensus 313 gt~~~D~~E~~al~~~~~~~~-~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~-~ 390 (421)
T PTZ00050 313 STPIGDKIELKAIKKVFGDSG-APKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQ-G 390 (421)
T ss_pred cCCCCCHHHHHHHHHHhcccc-CCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccC-C
Confidence 999999999999999998642 13689999999999999999999999999999999999999999999999999887 4
Q ss_pred cCCC--CCCcEEEEeccccccceeeeEeeec
Q 014349 397 ASKD--MPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 397 ~~~~--~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..+. .+++.+|+|||||||+|+|+||+++
T Consensus 391 ~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 391 KTAHPLQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred cccCcCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 3332 2579999999999999999999985
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-74 Score=565.27 Aligned_cols=396 Identities=44% Similarity=0.769 Sum_probs=367.0
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|+++++++ ...++..+++.+++ ||+..+++++..++++
T Consensus 11 ~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~--------------~~~~~~~~~g~i~~------f~~~~~~~~~~~~~~~ 70 (406)
T PRK08439 11 MINSLGLNKESSFKAICNGECGIKKITLFD--------------ASDFPVQIAGEITD------FDPTEVMDPKEVKKAD 70 (406)
T ss_pred EECCCcCCHHHHHHHHHcCCCceEeCCCcc--------------ccCCCCceeEEcCC------cChhhcCCHHHHhhcC
Confidence 589999999999999999999999998765 34566788898876 9988888999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+..+|++.++++||+|||+++.++ +..++|+++|++.+++...+.+...+...+...++|+.++..+.|.++++|+..|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~-~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEEL-DAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEH 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccC-CCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHh
Confidence 999999999999999999988776 3789999999999998888877777777778888999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||++++.++|+|++.||..|+++|++|++|++||+|+|..+++..+..|..+++++.. +.+|+..|+|||.+++|+
T Consensus 150 gl~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~-~~~p~~~~rpfd~~~~G~ 228 (406)
T PRK08439 150 GLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTR-NDDPKKASRPFDKDRDGF 228 (406)
T ss_pred CCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccC-CCCCccCcCCccCCCCcE
Confidence 9999999999999999999999999999999999999999999999999999999999854 455778999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++|||++++|||++++|+++|+++|++|.|++.++|+++++.|++ .++.++|++||+++|+ +|||||++|||||+.
T Consensus 229 v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~ 304 (406)
T PRK08439 229 VMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMAGN--PKIDYINAHGTSTPY 304 (406)
T ss_pred EeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--CccCEEEccCCcCCC
Confidence 999999999999999999999999999999999999999888876 5678999999999998 799999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|..|..+|+++|+... ..++++++|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ ..++.
T Consensus 305 ~D~~E~~al~~~f~~~~--~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~ 381 (406)
T PRK08439 305 NDKNETAALKELFGSKE--KVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIP-NVARK 381 (406)
T ss_pred CCHHHHHHHHHHhcccC--CCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCC-Ccccc
Confidence 99999999999998643 3478999999999999999999999999999999999999999999999999998 77777
Q ss_pred CCCcEEEEeccccccceeeeEeeec
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+++.+|+|||||||+|+|+||+++
T Consensus 382 ~~~~~~l~nsfgfGG~n~~lvl~~~ 406 (406)
T PRK08439 382 AELNVVMSNSFGFGGTNGVVIFKKV 406 (406)
T ss_pred CCCCEEEEeeecCCCceEEEEEecC
Confidence 8899999999999999999999985
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-74 Score=567.85 Aligned_cols=401 Identities=55% Similarity=0.900 Sum_probs=372.8
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||.|.++++||++|++|+++++++++++ ...++..+++++++ ||++.|+++++.++|+
T Consensus 11 ~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~--------------~~~~~~~~~g~i~~------f~~~~~~~~~~~~~~~ 70 (411)
T PRK07314 11 AVSPLGNDVESTWKNLLAGKSGIGPITHFD--------------TSDLAVKIAGEVKD------FNPDDYMSRKEARRMD 70 (411)
T ss_pred EECCCcCCHHHHHHHHHhCCCcEEECCccc--------------ccCCCccEEEEeCC------cChhhcCCHHHhhcCC
Confidence 589999999999999999999999998765 33566788999987 9988889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++.+++ ..++||++|++.++....++++..+...+...++|+.+++.+.+..+++++..|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEEN-ADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCC-cccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 9999999999999999999988774 889999999999999988888888888777888888889999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++++++|+|++.||..|+++|++|++|++||+|+|.++++..+..|..++.++.+ ..+|...|+|||.+++|+
T Consensus 150 gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~-~~~p~~~~~pfd~~~dG~ 228 (411)
T PRK07314 150 GAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTR-NDDPERASRPFDKDRDGF 228 (411)
T ss_pred CCCCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCC-CCCCCcCcCCCcCCCCCE
Confidence 9999999999999999999999999999999999999999999999988899999988754 445678899999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||++++.|+++|.++|++|.|++.++|+.+.+.|.+.+.+..+++++||+++|++|+||||||+|||||+.
T Consensus 229 ~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~ 308 (411)
T PRK07314 229 VMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPA 308 (411)
T ss_pred eEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCcc
Confidence 99999999999999999999999999999999999998888888777788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|..|..++.++|+... .++++++.|+++||+.+|+|++++++++++|++++|||++|+++|+|.+++++++ .+++.
T Consensus 309 ~d~~E~~al~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~ 385 (411)
T PRK07314 309 GDKAETQAIKRVFGEHA--YKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVP-NEARE 385 (411)
T ss_pred ccHHHHHHHHHHhcccC--CCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccC-CcccC
Confidence 99999999999998542 4689999999999999999999999999999999999999999999999999988 66777
Q ss_pred CCCcEEEEeccccccceeeeEeeecC
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
.+++++++|+|||||+|+|+||++|.
T Consensus 386 ~~~~~al~~s~gfGG~n~~~vl~~~~ 411 (411)
T PRK07314 386 RKIDYALSNSFGFGGTNASLVFKRYE 411 (411)
T ss_pred CCCCEEEEecccCCCceEEEEEecCC
Confidence 78999999999999999999999974
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-72 Score=553.49 Aligned_cols=398 Identities=56% Similarity=0.909 Sum_probs=368.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||+|.++++||++|++|++++++++.++ ...++.++++++++ ||++.|+++++.++|+
T Consensus 10 ~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~--------------~~~~~~~~~g~i~~------f~~~~~~~~~~~~~~~ 69 (407)
T TIGR03150 10 AVTPLGNGVEEFWENLLAGKSGIGPITRFD--------------ASDLPVKIAGEVKD------FDPEDYIDKKEARRMD 69 (407)
T ss_pred EECCCcCCHHHHHHHHHcCCCeeEECCccc--------------ccCCCCcEEEEeCC------cChhhcCCHHHHhhcC
Confidence 589999999999999999999999998765 23466788999987 9998889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++.+++ ..++||++|++.++....+.++..+.+.+...++|+.++..+.+.++++++..|
T Consensus 70 ~~~~l~~~aa~~Al~dAgl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T TIGR03150 70 RFIQYALAAAKEAVEDSGLDIEEED-AERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRY 148 (407)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCC-ccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHh
Confidence 9999999999999999999988774 889999999999999888888888887777888999899999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++++++|+|++.||..|+++|++|++|++||+|+|.++++..+..|...+.++.. +..+...|+||+.+++|+
T Consensus 149 gl~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~g~ 227 (407)
T TIGR03150 149 GAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTR-NDDPEKASRPFDKDRDGF 227 (407)
T ss_pred CCCCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCC-CCCCCcCCCCCcCCCCcE
Confidence 9999999999999999999999999999999999999999999999988888888888743 445667899999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||+++++|+++|+++|++|.|++.++++.+.+.|.+.+.++.++++++|+++|++|+||||||+|||||+.
T Consensus 228 ~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~ 307 (407)
T TIGR03150 228 VMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPL 307 (407)
T ss_pred EEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCC
Confidence 99999999999999999999999999999999999998888887777788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|.+|..++.++|+... .++||++.|+++||+++|||++++++++++|+++++||++|+++|+|.+++++++ .+.+.
T Consensus 308 ~D~~E~~a~~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~-~~~~~ 384 (407)
T TIGR03150 308 GDKAETKAIKRVFGDHA--YKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVP-NEARE 384 (407)
T ss_pred CCHHHHHHHHHHhccCC--CCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CCCcc
Confidence 99999999999998642 3699999999999999999999999999999999999999999999999999998 66777
Q ss_pred CCCcEEEEeccccccceeeeEee
Q 014349 401 MPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
+++|++++|+|||||+|+|+||+
T Consensus 385 ~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 385 RKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CCcCEEEEecccCCCceEEEEeC
Confidence 78899999999999999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-71 Score=623.34 Aligned_cols=408 Identities=27% Similarity=0.435 Sum_probs=354.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccC-CCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMG-NFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRS 78 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~ 78 (426)
|++|.|.|+++||++|.+|+++|+++|..+|... +|+++.. ..+..+++.+|++++ . .||+.+| +++++.+.
T Consensus 16 ~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~--~~~~~~~~~ggfl~~---v-~FD~~~F~i~p~ea~~ 89 (2582)
T TIGR02813 16 SIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKS--EADKSYCKRGGFLPE---V-DFNPMEFGLPPNILEL 89 (2582)
T ss_pred eeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCcccc--ccCCcccceeEecCc---c-CCCHhhcCCCHHHHHh
Confidence 5789999999999999999999999999899755 4455432 234678899999986 3 3999999 99999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHH---H------------------HHHHHH---Hh
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTV---D------------------AAQMIC---EK 134 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~---~------------------~~~~~~---~~ 134 (426)
|||+++|+++++++||+|||+... . +++|+|||+|++.+...... . ....+. ..
T Consensus 90 mDpqqrl~L~~a~eALedAG~~~~-~-~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (2582)
T TIGR02813 90 TDISQLLSLVVAKEVLNDAGLPDG-Y-DRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQD 167 (2582)
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCC-C-CCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhcc
Confidence 999999999999999999999643 4 58899999998766432100 0 011111 11
Q ss_pred hccCCCCcchhhhhhhHHHHHHHHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhh
Q 014349 135 RLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK 214 (426)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~a~~i~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~ 214 (426)
....+.+..+++.+.|+++++|++.|||+||+++|+++|+|++.||++|+++|++|+||++||||++..++|..+..|..
T Consensus 168 ~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~ 247 (2582)
T TIGR02813 168 QYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSK 247 (2582)
T ss_pred cccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHh
Confidence 12245667788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccCCCCCCCCcccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC--CCCCCCCChHHHHH
Q 014349 215 SRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHIDGKGAIL 292 (426)
Q Consensus 215 ~~~l~~~~~~~~~~~~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~~~~~~~~~~~~~~ 292 (426)
.++++ +++.|||||.+++||++|||++++||+++++|+++|++||++|+|++.++||+ +++.|+ ..++.+
T Consensus 248 ~~~lS------~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~--~~gq~~ 319 (2582)
T TIGR02813 248 TPAFT------TNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPR--PEGQAK 319 (2582)
T ss_pred ccCcC------CCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCC--HHHHHH
Confidence 99998 56889999999999999999999999999999999999999999999999998 456655 456789
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhccc-CCCcceecccccccchhHHhHHHHHHHHHHHHHH
Q 014349 293 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 371 (426)
Q Consensus 293 a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 371 (426)
+|++||++||++|+||+|||+|||||+.||++|..+|.++|+... ...+++|+|+|+++||+++|||++++++++++|+
T Consensus 320 ~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~ 399 (2582)
T TIGR02813 320 ALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALH 399 (2582)
T ss_pred HHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998643 2357899999999999999999999999999999
Q ss_pred hCCcCCCCCCCCCCCCCCCCC----CccccCCCC------CCcEEEEeccccccceeeeEeeec
Q 014349 372 HGVAPLTLNLAKPDPIFNDNF----MPLTASKDM------PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 372 ~~~~pp~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++++||++|+++|+|.++++. ++ .+.++| .+|++++|||||||+|+|+||+++
T Consensus 400 ~~~iPp~~~~~~pnp~~~~~~~~~~v~-~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 400 HKVLPPTINVDQPNPKLDIENSPFYLN-TETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred cCCcCCCCCCCCCCCCCCccccceeec-CCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 999999999999999998773 33 344444 368999999999999999999986
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-69 Score=535.21 Aligned_cols=397 Identities=54% Similarity=0.880 Sum_probs=369.0
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||.|.+.++||++|++|++++++++.++ ...++..+++++++ |+..++++++..++|+
T Consensus 10 ~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~--------------~~~~~~~~~~~i~~------~~~~~~~~~~~~~~~~ 69 (406)
T cd00834 10 AVTPLGNGVEEFWEALLAGRSGIRPITRFD--------------ASGFPSRIAGEVPD------FDPEDYLDRKELRRMD 69 (406)
T ss_pred eeCCCcCCHHHHHHHHHcCCCeeEECCccc--------------ccCCCccEEEEcCC------CChhhcCCHHHhccCC
Confidence 589999999999999999999999999876 33566788999987 7777669999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++.+++ ..+++|++|++.++....+.++..+..++.+.++|+.++..+.+..+++|+..|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 148 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELD-PERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRL 148 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCC-ccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHh
Confidence 9999999999999999999988774 899999999999999999999988888888889999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++++++|+|+++||..|+++|++|++|.+||+|+|..++|..+..|..++.++... ..|...++||+.+++|+
T Consensus 149 gl~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~-~~p~~~~~pf~~~~~g~ 227 (406)
T cd00834 149 GLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRN-DDPEKASRPFDKDRDGF 227 (406)
T ss_pred CCCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCC-CCCccCCCCCCCCCCCE
Confidence 99999999999999999999999999999999999999999988899999999999988642 23667899999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||++.++|+++++++|++|.|++.+.++.+.+.|.+.+.++.++++++|+++|++++|||||++|||||+.
T Consensus 228 ~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~ 307 (406)
T cd00834 228 VLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPL 307 (406)
T ss_pred eeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCcc
Confidence 99999999999999999999999999999999999998888887778888999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|.+|..++.++|+... .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.+++++++ .+.++
T Consensus 308 ~d~~E~~al~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~-~~~~~ 384 (406)
T cd00834 308 NDAAESKAIKRVFGEHA--KKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP-NEARE 384 (406)
T ss_pred ccHHHHHHHHHHhcccC--CCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CCCcc
Confidence 99999999999998742 3689999999999999999999999999999999999999999999988999988 77888
Q ss_pred CCCcEEEEeccccccceeeeEe
Q 014349 401 MPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl 422 (426)
++.|++++|+|||||+|+|+||
T Consensus 385 ~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 385 APIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred ccccEEEEeeecCCceeeEEEC
Confidence 8899999999999999999996
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-69 Score=515.97 Aligned_cols=339 Identities=49% Similarity=0.781 Sum_probs=319.5
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
+++..++++.++++|++|||+. .+++|+||++|++.++...++++++.+...+...++|+.++.++.|.++++|+.
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~----~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~ 76 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT----EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSI 76 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC----CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHH
Confidence 4788999999999999999986 147899999999999999999888888888888899999999999999999999
Q ss_pred HcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 159 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 159 ~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
.||++||+++++++|+|++.||..|+++|+.|++|++||||+|..+++..+..|..+++++.....+|...|||||.+++
T Consensus 77 ~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 156 (342)
T PRK14691 77 KHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD 156 (342)
T ss_pred HhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999986556678889999999999
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
||++||||+++||+++++|+++|.+++++|.|++..+|+.+...|.+.+.+..++|+++|+++||+|+|||||++|||||
T Consensus 157 G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT 236 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATST 236 (342)
T ss_pred CccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCC
Confidence 99999999999999999999999999999999999999988888888888999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC-CCCCCcccc
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-NDNFMPLTA 397 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~-~~~~~~~~~ 397 (426)
+.+|.+|..+|+++|+.. ..+||+++|+++||+++|+|+++++.++++|+++++||++|+++|+|.+ ++++++ .+
T Consensus 237 ~~~D~~E~~Ai~~~fg~~---~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~-~~ 312 (342)
T PRK14691 237 PVGDLGEINAIKHLFGES---NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIA-GN 312 (342)
T ss_pred cCCCHHHHHHHHHHhCCC---CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCccc-CC
Confidence 999999999999999863 3589999999999999999999999999999999999999999999998 588887 66
Q ss_pred CCCCCCcEEEEeccccccceeeeEeeec
Q 014349 398 SKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 398 ~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+++++.+++|+|+|||||+|+++||+++
T Consensus 313 ~~~~~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 313 AQPHDMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CccCCCCEEEEeCccCCCeeEEEEEeec
Confidence 7777899999999999999999999986
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-68 Score=525.41 Aligned_cols=398 Identities=29% Similarity=0.439 Sum_probs=341.0
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|++++.+++... .. ......+.++++++++ |+...+++++..++++
T Consensus 11 ~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~r~~~ 78 (410)
T PRK07103 11 VVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVP----DD--AGAGLASAFIGAELDS------LALPERLDAKLLRRAS 78 (410)
T ss_pred EECCCcCCHHHHHHHHHcCCCeEecCCccccccc----cc--ccccCCCceEEEEeCC------CChhhcCCHHHhhcCC
Confidence 5899999999999999999999999987652100 00 0011335678999987 7766668888889999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+..+|++.++++||+|||+++ . +.+|+||++|++.+.......++..+. +....+.|+.....+.+.++++|+..|
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~--~-~~~riGvivG~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~a~~ia~~l 154 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGP--V-DPDRIGLVVGGSNLQQREQALVHETYR-DRPAFLRPSYGLSFMDTDLVGLCSEQF 154 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCC--C-CCCCEEEEEccCCcchHHHHHHHHHhc-cCccccChhhhhhhcchHHHHHHHHHh
Confidence 999999999999999999953 2 478999999988776665555544432 344556777777777888999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccc-cCCCCCCCCcccccCCCc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-YNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~pf~~~~~G 239 (426)
|++||+++++++|+|++.||..|+++|++|++|++||+|++..+++..+..|..++.++.. +..+|...|+|||.+++|
T Consensus 155 gl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG 234 (410)
T PRK07103 155 GIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDG 234 (410)
T ss_pred CCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCC
Confidence 9999999999999999999999999999999999999999988899999999998888642 345677899999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+++|||++++|||++++|+++|+++|++|.|++.++|+++.+.|. ..+..++|++||+++|++|+|||||++|||||+
T Consensus 235 ~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~--~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 235 FIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPS--LEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred eeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCC--HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 999999999999999999999999999999999999998876554 456689999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCC-CCCCCCCCCccccC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP-DPIFNDNFMPLTAS 398 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~-~~~~~~~~~~~~~~ 398 (426)
.+|..|..+| ++... .++||++.|+++||+.+|+|++++++++++|+++++||++|+++| +| ++++++ ..+
T Consensus 313 ~~D~~E~~al---~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~--~~~~v~-~~~ 384 (410)
T PRK07103 313 LGDETELAAL---FASGL--AHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDE--RFRWVG-STA 384 (410)
T ss_pred CCCHHHHHHH---hcCCC--CCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCC--CcCccC-CCC
Confidence 9999999999 33221 368999999999999999999999999999999999999999988 55 456676 556
Q ss_pred CCCCCcEEEEeccccccceeeeEeee
Q 014349 399 KDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 399 ~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
+....+++++|+|||||+|+|+||++
T Consensus 385 ~~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 385 ESARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred cCCCCCEEEEecccCCCceEEEEEeC
Confidence 66678999999999999999999986
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-70 Score=580.57 Aligned_cols=406 Identities=29% Similarity=0.435 Sum_probs=360.2
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccC-CCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMG-NFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRS 78 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~ 78 (426)
|..|-..++++||++|.+|++.|+++|..+|+.. +|+++. ....+.+.++||++++ ++.||+.+| ++|+++..
T Consensus 13 ~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~--~~~gk~~~~~ggfl~~---~~~FD~~fFgisPrEA~~ 87 (1061)
T COG3321 13 CRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDP--TVPGKSYSRWGGFLDD---VDDFDALFFGISPREAEA 87 (1061)
T ss_pred ccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCcc--ccccccccccccccCC---ccccCHHHcCCCHHHHHh
Confidence 3467789999999999999999999999999654 455554 2345678899999986 678999999 99999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
|||++||.++.+++||+|||+.+..+. ..++|||+|.+...+....... .. ...++...+...+.++++||+
T Consensus 88 mDPQqRllLe~aw~AlEdAG~~~~~l~-g~~tgV~~g~~~~~y~~~~~~~------~~-~~~~~~~~g~~~~~~a~Risy 159 (1061)
T COG3321 88 MDPQQRLLLEVAWEALEDAGIYPDSLR-GSATGVFAGASVADYLLLLLAD------DE-AEPEYAITGNSSSVAAGRISY 159 (1061)
T ss_pred cCchHhHHHHHHHHHHHHcCCCccccC-CcceEEEEeeccCccccccccc------cc-cccceecccchhhHHHHHHHH
Confidence 999999999999999999999998874 6899999999876654332110 11 355666777788899999999
Q ss_pred HcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 159 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 159 ~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
.|+|+||+++|+++|+|+++|+++||+.|+.|+||++|+||++...+|.....++..++++ +++.|++||.+++
T Consensus 160 ~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls------~~g~c~~fd~~ad 233 (1061)
T COG3321 160 VLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS------PDGRCKAFDADAD 233 (1061)
T ss_pred HhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC------CCCcceecccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999888 7799999999999
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
||++|||++++||+++++|+++|++||++|+|.+.++||.......|+..++...+++||+++|+.|++|+|||+|||||
T Consensus 234 G~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT 313 (1061)
T COG3321 234 GYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGT 313 (1061)
T ss_pred CEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCC
Confidence 99999999999999999999999999999999999999964333334457789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcc---
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL--- 395 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~--- 395 (426)
++||++|..++..+|+......++.++|+|+|+||+..|+|+++++|++|+|+|+++||++|++.|+|.++++-.|+
T Consensus 314 ~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~ 393 (1061)
T COG3321 314 PLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVP 393 (1061)
T ss_pred CCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEee
Confidence 99999999999999987655578999999999999999999999999999999999999999999999998884443
Q ss_pred ccCCCC----CCcEEEEeccccccceeeeEeeec
Q 014349 396 TASKDM----PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 396 ~~~~~~----~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+.++| .+|++.+++|||||+|+|+||+++
T Consensus 394 ~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~ 427 (1061)
T COG3321 394 TEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEA 427 (1061)
T ss_pred cCCcCCCCCCCCceeeeeccCCCCCceEEEEeec
Confidence 333333 589999999999999999999875
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-68 Score=526.88 Aligned_cols=386 Identities=36% Similarity=0.557 Sum_probs=348.7
Q ss_pred CccCCCCC---HHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhh
Q 014349 1 MVTPLGCG---AETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHR 77 (426)
Q Consensus 1 ~vsp~G~~---~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~ 77 (426)
+|||+|.+ +++||++|++|+++|++++.++ ..++..++|++++ |+ ++++..+
T Consensus 10 ~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~---------------~~~~~~~~g~i~~------~~----~~~~~~~ 64 (407)
T cd00828 10 VVSPHGEGCDEVEEFWEALREGRSGIAPVARLK---------------SRFDRGVAGQIPT------GD----IPGWDAK 64 (407)
T ss_pred eecCCCCCCCCHHHHHHHHHcCCCceeeCCccc---------------ccCCccEEEEccC------CC----cCHHHHH
Confidence 58999999 9999999999999999998765 2456788899986 55 5677777
Q ss_pred cc---CHHHHHHHHHHHHHHHHcCCCCCC-CCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhh--hH
Q 014349 78 SI---ARFIAYALCAADEALHDAKWLPSD-QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI--NM 151 (426)
Q Consensus 78 ~~---~~~~~l~~~a~~~Al~dAGl~~~~-~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 151 (426)
++ +|+++|+++++++||+|||+++.+ + +..++|+++|++.+.......++..+. +..+|+.++..+. +.
T Consensus 65 ~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~-~~~~~gv~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 139 (407)
T cd00828 65 RTGIVDRTTLLALVATEEALADAGITDPYEV-HPSEVGVVVGSGMGGLRFLRRGGKLDA----RAVNPYVSPKWMLSPNT 139 (407)
T ss_pred hccCCCHHHHHHHHHHHHHHHhCCCCccccC-CccCeEEEEeeccCCHHHHHHHHHHHh----hccCCcccchhccccch
Confidence 87 999999999999999999998766 5 478999999999998877766665443 3467888888887 99
Q ss_pred HHHHHHHHcCC-CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCC
Q 014349 152 ASGHVSMKYGF-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 230 (426)
Q Consensus 152 ~a~~i~~~lgl-~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (426)
++++|++.||+ +||+++++++|+|++.||..|+++|++|++|++||+|+|.++ +..+..|..++.++.. ...|...|
T Consensus 140 ~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~-~~~~~~~~ 217 (407)
T cd00828 140 VAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTA-EEEPEEMS 217 (407)
T ss_pred HHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCC-CCCCCccc
Confidence 99999999999 999999999999999999999999999999999999999977 8888899999988754 23355789
Q ss_pred cccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 014349 231 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 310 (426)
Q Consensus 231 ~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 310 (426)
+|||.+++|+++||||+++|||++++|+++|+++|++|.|++.++++.+...+. .+.++.++|++||+++|++|+||||
T Consensus 218 ~pfd~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~ 296 (407)
T cd00828 218 RPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDV 296 (407)
T ss_pred CCCcCCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCE
Confidence 999999999999999999999999999999999999999999999998877665 6788899999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCC
Q 014349 311 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 390 (426)
Q Consensus 311 v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~ 390 (426)
|++|||||+.+|..|..+++++|+... .+++|+++|+++||+++|+|++++++++++|+++++||++|+++|+|.+++
T Consensus 297 i~~hgtgt~~~D~~E~~ai~~~~~~~~--~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 374 (407)
T cd00828 297 ISAHGTSTPANDVAESRAIAEVAGALG--APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEH 374 (407)
T ss_pred EecccccCccccHHHHHHHHHHHhccC--CCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccc
Confidence 999999999999999999999998753 468999999999999999999999999999999999999999999999988
Q ss_pred CCCccccCCCCC--CcEEEEeccccccceeeeEe
Q 014349 391 NFMPLTASKDMP--ISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 391 ~~~~~~~~~~~~--~~~~l~~~~g~gG~~~~~vl 422 (426)
++++ .++++++ .+.+++|+|||||+|+|+||
T Consensus 375 ~~~~-~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 375 LSVV-GLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred cccc-CcCccCCCCccEEEEecccCCCcceEEEC
Confidence 8888 6777777 49999999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-68 Score=512.55 Aligned_cols=368 Identities=37% Similarity=0.596 Sum_probs=322.5
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|. +++||++|++|+|+|++++.++. ...++ .+.+. ++ + ..++
T Consensus 11 ~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~-------------~~~~~---~~~~~-------~~------~---~~~~ 57 (381)
T PRK05952 11 LVSALGD-LEQSWQRLLQGKSGIKLHQPFPE-------------LPPLP---LGLIG-------NQ------P---SSLE 57 (381)
T ss_pred EECcccC-HHHHHHHHHcCCCCeEeCCcccc-------------ccccc---ceeec-------cc------c---cccc
Confidence 5899999 99999999999999999887540 01111 11111 00 1 1123
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhc---cCCCCcchhhhhhhHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL---RRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~i~ 157 (426)
+++..++++||+|||+++. .+|+||++|++.+....++++...+.+++. ..++|..++.+++|.++++++
T Consensus 58 ---~~~~~a~~~Al~dagl~~~----~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 130 (381)
T PRK05952 58 ---DLTKTVVTAALKDAGLTPP----LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAA 130 (381)
T ss_pred ---HHHHHHHHHHHHhcCCCCC----CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHH
Confidence 3556789999999999642 478999999999998888887776655432 256778888999999999999
Q ss_pred HHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 158 MKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 158 ~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
..|+++||+++++++|+|++.||..|+++|++|++|++||+|+|..+++..+..|..++.++. ..|+|||.++
T Consensus 131 ~~~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~-------~~~rPfd~~r 203 (381)
T PRK05952 131 RQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK-------TGAYPFDRQR 203 (381)
T ss_pred HHhCCCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC-------CCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999899999999999998873 4699999999
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 317 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtg 317 (426)
+|+++|||++++|||++++|+++|+++|++|.|++.++|+.+.+.|++.+....++++++|+++|++|+|||||++||||
T Consensus 204 ~G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtg 283 (381)
T PRK05952 204 EGLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTA 283 (381)
T ss_pred CCccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCC
Confidence 99999999999999999999999999999999999999999988888888889999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcccc
Q 014349 318 TPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTA 397 (426)
Q Consensus 318 t~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~ 397 (426)
|+.+|..|..+++++|+. .+||++.|+++||+++|+|++++++++++|+++++||++|+++|+ +++++++ +
T Consensus 284 t~~~D~~E~~al~~~fg~-----~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~--~~~~~v~--~ 354 (381)
T PRK05952 284 TRLNDQREANLIQALFPH-----RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPE--FDLNFVR--Q 354 (381)
T ss_pred CCCCcHHHHHHHHHHcCC-----CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCC--CCCCcCC--C
Confidence 999999999999999974 489999999999999999999999999999999999999999875 4566665 3
Q ss_pred CCCCCCcEEEEeccccccceeeeEeee
Q 014349 398 SKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 398 ~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
++..+.+++++|+|||||+|+++||++
T Consensus 355 ~~~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 355 AQQSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred cccCCCCEEEEeeecCCCeeEEEEEeC
Confidence 566678999999999999999999986
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-66 Score=510.36 Aligned_cols=391 Identities=38% Similarity=0.527 Sum_probs=337.4
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|++++.++ ...++.+++|.++. |+. . ....++
T Consensus 20 ~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~--------------~~~~~~~~~g~~~~------~~~-~-----~~~~~~ 73 (425)
T PRK06501 20 VVTSLGQGKADNWAALTAGESGIHTITRFP--------------TEGLRTRIAGTVDF------LPE-S-----PFGASA 73 (425)
T ss_pred EECCCCCCHHHHHHHHHcCCCceEcCCccc--------------ccCCCCceEEEEee------ccc-c-----cccccC
Confidence 589999999999999999999999998765 34567788998853 222 1 122456
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCC-------------CCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhh
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQ-------------GQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 147 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~-------------~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (426)
+.+++++.++++||+|||+...+. ..+.+++++.++...... .++.++........+..++..
T Consensus 74 ~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 149 (425)
T PRK06501 74 LSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAP----SYDRLLRAARGGRFDALHERF 149 (425)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHH----HHHHHHhhcCcccCChhhhhh
Confidence 788999999999999999953321 125688888887654322 223333333333344456666
Q ss_pred hhhHHHHHHHHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCC
Q 014349 148 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 227 (426)
Q Consensus 148 ~~~~~a~~i~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (426)
+.+..+++|+..||++||+++++++|+|++.||..|+++|++|++|++||+|+|..+++..+..|..++.++.. .+.+.
T Consensus 150 ~~~~~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~-~~~~~ 228 (425)
T PRK06501 150 QFGSIADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQ-NDPPE 228 (425)
T ss_pred cccHHHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccC-CCCCC
Confidence 77889999999999999999999999999999999999999999999999999998999999999999888753 34467
Q ss_pred CCCcccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 014349 228 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 307 (426)
Q Consensus 228 ~~~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 307 (426)
..|||||.+++|+++|||++++|||+.++|+++|+++|++|.|++.++++.+.+.+.+++..+.++|+++|+++|++|+|
T Consensus 229 ~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~d 308 (425)
T PRK06501 229 KASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQ 308 (425)
T ss_pred cccCCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 89999999999999999999999999999999999999999999999999888777777788899999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC
Q 014349 308 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 387 (426)
Q Consensus 308 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~ 387 (426)
||||++|||||+.+|..|..+|.++|+... ..+||+++|+++||+.+|+|++++++++++|+++++||++|+++|+|.
T Consensus 309 Id~i~~Hgtgt~~~d~~E~~al~~~~~~~~--~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~ 386 (425)
T PRK06501 309 IDYINAHGTSTPENDKMEYLGLSAVFGERL--ASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPA 386 (425)
T ss_pred cCEEEecCccCcchHHHHHHHHHHHhcccC--CCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCC
Confidence 999999999999999999999999997532 468999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 388 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+++++++ ...+..+++.+++|||||||+|+|+||+++
T Consensus 387 ~~~~~~~-~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~ 423 (425)
T PRK06501 387 IPLDVVP-NVARDARVTAVLSNSFGFGGQNASLVLTAE 423 (425)
T ss_pred CCcccCC-CcccCCCCCEEEEeCccCCCeeEEEEEecC
Confidence 9999998 666677899999999999999999999986
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-66 Score=512.40 Aligned_cols=407 Identities=28% Similarity=0.439 Sum_probs=350.3
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~ 79 (426)
++||.|.++++||++|++|++++++++..+|....|..+......+...++.++++++ ...||++.| ++++..+++
T Consensus 8 ~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~d~~~~~i~~~~~~~~ 84 (424)
T smart00825 8 CRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDD---VDLFDAAFFGISPREAEAM 84 (424)
T ss_pred eeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCc---hhhCCHhHcCCCHHHHHhc
Confidence 5899999999999999999999999986666544332222221122345677887764 334888888 899999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
++.++|+++++++||+|||+++.+++ .+|++|++|++.+.+ ..........+.++.++..+.+..+.+++..
T Consensus 85 ~~~~~l~~~aa~~Al~dAGl~~~~id-~~~~gv~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 156 (424)
T smart00825 85 DPQQRLLLEVAWEALEDAGIDPESLR-GSRTGVFVGAMSSDY-------AELLARDPEDIEGYAATGTARSFIANRISYF 156 (424)
T ss_pred CHHHHHHHHHHHHHHHHcCCChhHcC-CCCCEEEEEEcHHHH-------HHHHhhCccccchhhhccchhHHHHHHHHHH
Confidence 99999999999999999999888774 789999999865332 2223344556777778888889999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
||++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..|...+.++ +...++||+.+++|
T Consensus 157 lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~------~~~~~~pf~~~~~g 230 (424)
T smart00825 157 FDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS------PDGRCKTFDADADG 230 (424)
T ss_pred hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC------CCCCCCCCCCCCCc
Confidence 999999999999999999999999999999999999999999988888888888887776 45789999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+++||||+++||+++++|+++++++|++|.|++..+++.+.....+.......+++++|+++|++++|||+|++|||||+
T Consensus 231 ~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~ 310 (424)
T smart00825 231 YVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTP 310 (424)
T ss_pred ccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCC
Confidence 99999999999999999999999999999999999988765444456677889999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhccc-CCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCC----CCc
Q 014349 320 LGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN----FMP 394 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~----~~~ 394 (426)
.+|..|..+++++|+... .+.+++|++.|+++||+.+|+|++++++++++|+++++||++|+++|+|.++++ +++
T Consensus 311 ~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~ 390 (424)
T smart00825 311 LGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVP 390 (424)
T ss_pred CCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEcc
Confidence 999999999999998642 235689999999999999999999999999999999999999999999999877 444
Q ss_pred cccCCCC----CCcEEEEeccccccceeeeEeeec
Q 014349 395 LTASKDM----PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 395 ~~~~~~~----~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+++++ .++++++|+|||||+|+|+||+++
T Consensus 391 -~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 391 -TEATPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred -CCCcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 445444 589999999999999999999975
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-64 Score=498.14 Aligned_cols=402 Identities=28% Similarity=0.482 Sum_probs=346.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~ 79 (426)
+++|.|.++++||++|++|++++++++..+|....|.++.. .......++++++++ .+.||..+| ++++..+.+
T Consensus 10 ~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~i~~---~~~~~~~~~~~~~~~~~~~ 84 (421)
T cd00833 10 CRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPG--KPGKTYTRRGGFLDD---VDAFDAAFFGISPREAEAM 84 (421)
T ss_pred eECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccc--cCCCcceecceecCC---cccCCHhHcCCCHHHHHhc
Confidence 58999999999999999999999999877765443322111 123446677888875 345787777 889999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
+++++|+++|+++||+|||+++.++ +..++||++|++.+.+ ..+.......++++.++..+.+..+.+++..
T Consensus 85 ~~~~~l~~~aa~~AL~dAgl~~~~~-~~~~~gv~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 156 (421)
T cd00833 85 DPQQRLLLEVAWEALEDAGYSPESL-AGSRTGVFVGASSSDY-------LELLARDPDEIDAYAATGTSRAFLANRISYF 156 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCchhc-CCCCceEEeCcCHHHH-------HHHHhhcccccCcccccCcchHHHHHHHHHH
Confidence 9999999999999999999988776 4889999999976522 2222233345788888888889999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
+|++||+++++++|+|++.||..|+++|++|++|++||+|+|.+.++..+..+..++.++ +...++||+.+++|
T Consensus 157 ~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~------~~~~~~pf~~~~~g 230 (421)
T cd00833 157 FDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS------PDGRCRPFDADADG 230 (421)
T ss_pred cCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCC------CCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999988888888888888776 44679999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+++||||+++||+++++|++++.++|++|.|++..+++.+.....+...+..++++++|+++|++++||||+++|||||+
T Consensus 231 ~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~ 310 (421)
T cd00833 231 YVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTP 310 (421)
T ss_pred eeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCC
Confidence 99999999999999999999999999999999999988765444556778899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhccc-CCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCC----CCc
Q 014349 320 LGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN----FMP 394 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~----~~~ 394 (426)
.+|..|..++.++|+... ...++++++.|+++||+.+|+|++++++++++|+++.+||++|+++|+|.++++ +++
T Consensus 311 ~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~ 390 (421)
T cd00833 311 LGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVP 390 (421)
T ss_pred CCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCCeEee
Confidence 999999999999998652 124689999999999999999999999999999999999999999999998754 444
Q ss_pred cccCCCCC----CcEEEEeccccccceeeeEe
Q 014349 395 LTASKDMP----ISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 395 ~~~~~~~~----~~~~l~~~~g~gG~~~~~vl 422 (426)
++.++++ ++++++|+|||||+|+|+||
T Consensus 391 -~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 391 -TEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred -CCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 4444443 79999999999999999986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-63 Score=483.32 Aligned_cols=377 Identities=33% Similarity=0.493 Sum_probs=320.7
Q ss_pred CccCCCCCHHHHHHHHHcCC-CceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGE-CGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~-s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~ 79 (426)
+|||+|.++++||++|++|+ ++|++++.++ . .++.. .+.+++ |+. .+++.+..+++
T Consensus 11 ~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~--------------~-~~~~~-~g~~~~------~~~-~~~~~~~~~~~ 67 (392)
T PRK09185 11 ATSALGRGLDAILAALRAGRASGMRPCDFWL--------------V-DLPTW-VGEVVG------VEL-PALPAALAAFD 67 (392)
T ss_pred EECCCcCCHHHHHHHHHcCCCCCeEeCcccc--------------c-cCCeE-EEEecC------ccc-ccCCHHHHhcC
Confidence 58999999999999999999 9999998654 1 13333 355665 552 33566666778
Q ss_pred CHHHHHHHHHHHH---HHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHH
Q 014349 80 ARFIAYALCAADE---ALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHV 156 (426)
Q Consensus 80 ~~~~~l~~~a~~~---Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 156 (426)
++..+++..|+.+ |+.+++ .+. +..|+||++|++.+.....+..+..+.........++.++..+.+.++++|
T Consensus 68 ~~~~~~~~~a~~~~~~a~~~~~---~~~-~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 143 (392)
T PRK09185 68 CRNNRLALLALQQIEPAVEAAI---ARY-GADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFL 143 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHhhc---ccC-CCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHH
Confidence 8888887777666 555554 122 467999999999999888777666544322222345667778889999999
Q ss_pred HHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC
Q 014349 157 SMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236 (426)
Q Consensus 157 ~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 236 (426)
+..||++||+++++++|+|++.||..|+++|++|++|.|||+|+|. ..+..+..|..++.++. ..|+|||.+
T Consensus 144 a~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~-------~~~~Pfd~~ 215 (392)
T PRK09185 144 RAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP-------QPCRPFSAN 215 (392)
T ss_pred HHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC-------CccCCCcCC
Confidence 9999999999999999999999999999999999999999999997 55666677777776652 579999999
Q ss_pred CCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 014349 237 RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 316 (426)
Q Consensus 237 ~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgt 316 (426)
++|+++|||++++||+++ ++.. ++|.|++.++|+.+...|++.+.+..++++++|+++|++|+|||||++|||
T Consensus 216 ~~G~~~gEGaa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgt 288 (392)
T PRK09185 216 RDGINIGEAAAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGT 288 (392)
T ss_pred CCccceeceEEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCC
Confidence 999999999999999987 2222 579999999999988888888888899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccc
Q 014349 317 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLT 396 (426)
Q Consensus 317 gt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~ 396 (426)
||+.+|..|..++.++|+.. +||++.|+++||+++|||++++++++++|+++++||++|+++|+|.+++++++ .
T Consensus 289 gt~~~D~~E~~al~~~f~~~-----~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~-~ 362 (392)
T PRK09185 289 ATPLNDAMESRAVAAVFGDG-----VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLV-E 362 (392)
T ss_pred CCcCCCHHHHHHHHHHhCCC-----CceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccC-C
Confidence 99999999999999999753 68999999999999999999999999999999999999999999999998887 6
Q ss_pred cCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 397 ASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 397 ~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+++.+++|++++|||||||+|+|+||++.
T Consensus 363 ~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 363 NAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 67777899999999999999999999985
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-62 Score=474.37 Aligned_cols=365 Identities=21% Similarity=0.269 Sum_probs=303.8
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChh-hhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSK-DHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~-~~~~~ 79 (426)
+|||+|.++++||++|++|+++ ..++..+| ..++.... .+ ++.+.+++++ ..++|
T Consensus 15 ~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~--------------~~~~~~~~---~~------~~~~~~~~~~~~~r~~ 70 (398)
T PRK06519 15 LVSSLGEGLDAHWNALSAGRPQ-PNVDTETF--------------APYPVHPL---PE------IDWSQQIPKRGDQRQM 70 (398)
T ss_pred EECCCCCCHHHHHHHHHcCCCC-CCCCcccc--------------cCcCcccc---cc------cChhhcCCchhhhhcc
Confidence 5899999999999999999997 22222111 11222222 22 3333445555 67899
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHH------------HHHHHHhhccCCCCcchhhh
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDA------------AQMICEKRLRRLSPFFIPRI 147 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 147 (426)
++.++|++.++++||+|||++..+. ++.|+||++|++.+........ ...+.+.+.+.++|+.++.+
T Consensus 71 ~r~~~~a~~Aa~~Al~dAGl~~~~~-~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 149 (398)
T PRK06519 71 ETWQRLGTYAAGLALDDAGIKGNEE-LLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQ 149 (398)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCC-CccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhh
Confidence 9999999999999999999975433 3679999999999887665432 22334455677899999999
Q ss_pred hhhHHHHHHHHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCC
Q 014349 148 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 227 (426)
Q Consensus 148 ~~~~~a~~i~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (426)
+.|.++++|+..||++||+++++++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++.
T Consensus 150 ~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~------- 222 (398)
T PRK06519 150 LSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLK------- 222 (398)
T ss_pred hhhHHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCC-------
Confidence 9999999999999999999999999999999999999999999999999999999899988899999988873
Q ss_pred CCCcc-ccc---CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 014349 228 EASRP-FDC---GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 303 (426)
Q Consensus 228 ~~~~p-f~~---~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl 303 (426)
..++| ||. +++||++|||++++|||++++|++||++||++|.|++...+ +. ...++.++|++||++||+
T Consensus 223 ~~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~------~~-~~~~~~~am~~AL~~Agl 295 (398)
T PRK06519 223 GGWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRA------RR-APGDLEASLERLLKPAGG 295 (398)
T ss_pred CCCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC------CC-ChHHHHHHHHHHHHHCCC
Confidence 24555 555 69999999999999999999999999999999999964322 11 234678999999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Q 014349 304 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383 (426)
Q Consensus 304 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~ 383 (426)
++|||||++|||||+.+|..|..+|+++|+ +||+++|+++||+++|+|+++++.++++|++|++||++|++
T Consensus 296 -~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~-------~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~- 366 (398)
T PRK06519 296 -LAAPTAVISGATGAHPATAEEKAALEAALA-------GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDAS- 366 (398)
T ss_pred -cccCCEEEeCCCCCCCccHHHHHHHHHHcC-------CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCC-
Confidence 899999999999999999999999999994 57999999999999999999999999999999999999972
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
| ..++..+++.++++++|++|.-.-.+++.
T Consensus 367 --~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 367 --G---------EKPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred --c---------ccCccccccEEEEEeeccCCcceeEEEEe
Confidence 2 23455668899999999999877666654
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-58 Score=459.82 Aligned_cols=383 Identities=23% Similarity=0.361 Sum_probs=337.7
Q ss_pred CCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhccCHH
Q 014349 4 PLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARF 82 (426)
Q Consensus 4 p~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~~~~ 82 (426)
|--.++++||++|.+|.+.++.-++ +|....| .+|.+.| ...+ ...||..+| ..+++...|||+
T Consensus 23 Pes~nv~eF~~nLl~g~DmVtdd~r-rW~~G~y----------gLP~r~g-KlKd---L~kFDa~ff~vh~KQa~~MDPq 87 (2376)
T KOG1202|consen 23 PESDNVKEFGDNLLAGVDMVTDDPR-RWEAGLY----------GLPKRSG-KLKD---LNKFDAGFFGVHPKQANTMDPQ 87 (2376)
T ss_pred CCcccHHHHhhhhhcccccccCCcc-ccccccc----------CCchhhc-chhh---hhhhcccccCcCcccccccCHH
Confidence 5567899999999999998887664 6765544 3443333 3322 346999999 999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCC
Q 014349 83 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 162 (426)
Q Consensus 83 ~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl 162 (426)
.||.+++.+||+-|||+.|.++. ..++|||+|.+..+.+... ...+..+..+...+....+.++||++.|++
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LR-Gs~tGv~vg~s~seTs~~~-------~~dp~t~~Gy~mtgc~raMfaNRiSytFDf 159 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLR-GSRTGVFVGVSGSETSGAL-------SQDPDTVNGYSMTGCVRAMFANRISYTFDF 159 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcC-cccceeEEeecCccccccc-------cCCCccccceeecccHHHHhhcceeEEEec
Confidence 99999999999999999999984 9999999999876654332 223445667788889999999999999999
Q ss_pred CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCccee
Q 014349 163 QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVI 242 (426)
Q Consensus 163 ~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~~~ 242 (426)
+||++.++++|+|++.||..|.+.|+.|+||.+||+|+...+.|.....|-++|+++ |++.|+.||...+||.+
T Consensus 160 qGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls------~dGsCkaFDeagnGY~R 233 (2376)
T KOG1202|consen 160 QGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS------PDGSCKAFDEAGNGYCR 233 (2376)
T ss_pred cCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC------CCCcccchhccCCceee
Confidence 999999999999999999999999999999999999999999999999999999999 77999999999999999
Q ss_pred ccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC---CCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 243 GEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 243 geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+||+++++|.+...|++ +||.|.-...++||. .++.| .+..+.+.+++.|+++|+.|++|-|||+|||||+
T Consensus 234 seg~~avllqrk~~ArR----vYAtilnartNTDGfKEqGvTfP--~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTk 307 (2376)
T KOG1202|consen 234 SEGVVAVLLQRKSLARR----VYATILNARTNTDGFKEQGVTFP--SGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTK 307 (2376)
T ss_pred cCceEEEEEehhHHHHH----HHHHhhccccCCCchhhcCccCC--CcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCC
Confidence 99999999999998875 688888889999986 35665 4666789999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCC------CC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN------FM 393 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~------~~ 393 (426)
.||+-|+.+|.++|+.. +..++.|+|+|+++||++-|||+..+.+.+++|++|.|||++|++.|||.++-. .|
T Consensus 308 VGDpQEaN~it~~fC~~-Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVV 386 (2376)
T KOG1202|consen 308 VGDPQEANGITRFFCAT-RTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVV 386 (2376)
T ss_pred CCChHHhhhHHHHHhhc-CCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEe
Confidence 99999999999999973 446889999999999999999999999999999999999999999999987432 33
Q ss_pred ccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 394 PLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 394 ~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.++.+|+...+.+|||||||.|+|+||+.
T Consensus 387 --d~~lp~~GGivGiNSFGFGGsN~HviLks 415 (2376)
T KOG1202|consen 387 --DRPLPWRGGIVGINSFGFGGSNAHVILKS 415 (2376)
T ss_pred --cCCCCccCceeeeeccccCCCceeEEecc
Confidence 46677888899999999999999999986
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-42 Score=329.41 Aligned_cols=322 Identities=34% Similarity=0.511 Sum_probs=273.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
+++|+++|+++||++||+++... ..+..+|+++++.+..... .........+.|+.+.+.+.+..+++|+..+|
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~-~~~i~~ii~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 84 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQ-KNPIVGVVVGTGGGSPRFQ-----VFGADAMRAVGPYVVTKAMFPGASGQIATPLG 84 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCcccc-CCCCEEEEEEeCCccHHHH-----hhhhccccccCcchhhcccchHHHHHHHHHhC
Confidence 67899999999999999984322 1345599999887665322 12233455678888888889999999999999
Q ss_pred CCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcce
Q 014349 162 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 241 (426)
Q Consensus 162 l~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~~ 241 (426)
+++|+++++.+|+|++.||..|+++|++|++|.+||+++|....+.........+.. .|+..++||+...+|++
T Consensus 85 l~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~ 158 (332)
T cd00825 85 IHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALS------TPEKASRTFDAAADGFV 158 (332)
T ss_pred CCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhcccc------CCCCCCCCCCCCCCCEE
Confidence 999999999999999999999999999999999999999987766544332222222 25678899999999999
Q ss_pred eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC
Q 014349 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG 321 (426)
Q Consensus 242 ~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~ 321 (426)
+|||++++||++.+.|++++.+++++|.+++...++.+...+.+......++++++|+++|++++|||++++|++|++..
T Consensus 159 ~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~ 238 (332)
T cd00825 159 FGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238 (332)
T ss_pred EEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC
Confidence 99999999999999999999999999999998888765544445567788999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCC
Q 014349 322 DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM 401 (426)
Q Consensus 322 D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~ 401 (426)
|.+|..++...++.+ ++++.+.|..+||+.+|+++++++.++++++++.+||+.|+.++++ +.+++. .+.+..
T Consensus 239 ~~~e~~~~~~~~~~~----~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~-~~~~~~ 311 (332)
T cd00825 239 DVKELKLLRSEFGDK----SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDE--AGLNIV-TETTPR 311 (332)
T ss_pred CHHHHHHHHHHhCCC----CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCc--ccCccc-CCCCCC
Confidence 999999998887543 4788999999999999999999999999999999999999999988 344444 445666
Q ss_pred CCcEEEEeccccccceeeeEe
Q 014349 402 PISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 402 ~~~~~l~~~~g~gG~~~~~vl 422 (426)
+.+.++++++|+||+++++||
T Consensus 312 ~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 312 ELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCEEEEeeecCCCeeEEEeC
Confidence 789999999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=325.28 Aligned_cols=327 Identities=20% Similarity=0.196 Sum_probs=249.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.+.++.|++|++|.+.+...+..+. ...........+. .+......
T Consensus 12 ~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~--------------~~~~~i~~~~~~~--------------~~~~~~~~ 63 (348)
T PRK06147 12 MVTAVGLDAPSSCAAIRARLDNFQETRFIDP--------------PGGEWLIGAPVPL--------------PPPWRGPE 63 (348)
T ss_pred eeecCcCCHHHHHHHHHcccccccccccccC--------------CCCCceEeecCcC--------------CcccCchH
Confidence 5899999999999999999887754443220 0001111111111 11112345
Q ss_pred HHHHHHHHHHHHHHHHcC-CCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAK-WLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAG-l~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
+..+|+..|+++||++++ ++ ..++.++++.+... ....+. .+.+..+..++..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~------~~~i~lil~~~~~~----------------~~~~~~----~~~~~~~~~~~~~ 117 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALD------ASEAPLLLCVAEEE----------------RPGRPP----DLEERLLRELEAR 117 (348)
T ss_pred HHHHHHHHHHHHHHHhccccc------ccCCcEEEEeCchh----------------cCCCCc----chHHHHHHHHHHH
Confidence 788999999999999998 43 34457777653210 000111 1122335667888
Q ss_pred cCC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 160 YGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 160 lgl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
+|+ ++++++|.++|+|++.||..|+++|++|++|.+||+|+|.++++..+..|...+.+.. +.++
T Consensus 118 lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~-------------~~~~ 184 (348)
T PRK06147 118 LGLRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT-------------SQNS 184 (348)
T ss_pred hCCCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC-------------CCCC
Confidence 887 5788999999999999999999999999999999999999888877777776665542 1368
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCC-CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQ-PHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 316 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~-~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgt 316 (426)
+||++||||+++|||+.++|++++.++|+ .|++...++.+... +.+++.++.++|+++|+++|++|+|||||+.|+|
T Consensus 185 ~G~v~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~ 262 (348)
T PRK06147 185 NGFIPGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLN 262 (348)
T ss_pred CceeeeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCC
Confidence 99999999999999999999999999998 66666666544332 2236788999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccc
Q 014349 317 STPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLT 396 (426)
Q Consensus 317 gt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~ 396 (426)
||+.+|..|..++.++|+... ..++++++|+++||+++|+|+++++.++++|+++++|+.
T Consensus 263 gt~~~d~~e~~A~~~~f~~~~--~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~------------------ 322 (348)
T PRK06147 263 GEQYRFKEAALAEMRLFRVRK--EFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP------------------ 322 (348)
T ss_pred CCccchHHHHHHHHHHhhhcc--CCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC------------------
Confidence 999999999999999998653 357899999999999999999999999999999998652
Q ss_pred cCCCCCCcEEEEeccccccceeeeEeee
Q 014349 397 ASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 397 ~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.+|+.+....|.-+++||++
T Consensus 323 --------~~L~~s~~d~g~r~a~~l~~ 342 (348)
T PRK06147 323 --------NVLCHLSDDDGARAALVLEY 342 (348)
T ss_pred --------cEEEEecCCCCceEEEEEec
Confidence 45556666667777777764
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=285.90 Aligned_cols=240 Identities=36% Similarity=0.609 Sum_probs=183.5
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~ 79 (426)
+|||+|.++++||++|++|++++++++. +|....|+..... .....+.+.+++++ ...||...+ ++++..++|
T Consensus 11 ~~~p~g~~~~~~w~~L~~g~~~~~~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 84 (254)
T PF00109_consen 11 CVTPGGDGLEEFWEALLSGRSGIRPIPE-RWDPSDYYDPPSR-VAGEIDDKKGGFID----DFDFDAYFFGIPPREARRM 84 (254)
T ss_dssp EEBTTBSSHHHHHHHHHTT---EEESCS-SSCHTTSTTSSCS-EEECBSSSEESSST----TTCGGGTSTCHHHHHHHTS
T ss_pred EECcCCCCHHHHHhhhccCceeeeeecc-ccccccccccCCc-ccccccccccceee----ecccccccccccchhhhhh
Confidence 5899999999999999999999999997 7754444211100 01223333444443 245777666 677788899
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCC-cEEEEEcCCCCChhHHHHHHHHHHHhh--ccCCCCcchhhhhhhHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKE-RTGVSIGGGIGSISDTVDAAQMICEKR--LRRLSPFFIPRILINMASGHV 156 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~-~~gv~~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~i 156 (426)
+++++|++.++.+||+|||+.+.++. .. |+||++|++.+.. ..+..+.... .....|..++.++.|.++++|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~-~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~i 159 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLD-GERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPNTLPNSAAGRI 159 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHT-GGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHH
T ss_pred hhhhhHHHHHhhhhcccccccccccc-cccceeeccccccccc----cccccccccccccccccccccCcccccccccch
Confidence 99999999999999999999876553 44 5999999988832 3333444333 456667556667999999999
Q ss_pred HHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC
Q 014349 157 SMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236 (426)
Q Consensus 157 ~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 236 (426)
++.||++||+++++++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++. +..|+||+.+
T Consensus 160 a~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~------~~~~~pf~~~ 233 (254)
T PF00109_consen 160 AILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSA------DGPCRPFDPF 233 (254)
T ss_dssp HHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-T------TSGGGSTBTT
T ss_pred hhhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccc------cccccccCCC
Confidence 9999999999999999999999999999999999999999999998899999999999997773 3679999999
Q ss_pred CCcceeccceEEEEecchHHH
Q 014349 237 RDGFVIGEGSGVLVLEELEHA 257 (426)
Q Consensus 237 ~~G~~~geGa~alvL~~~~~A 257 (426)
++|+++|||++++||+++++|
T Consensus 234 ~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 234 ADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp B-SB-BB-EEEEEEEEEHHHH
T ss_pred CCCEEEECceEEEEEEEhhhC
Confidence 999999999999999999876
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=245.89 Aligned_cols=247 Identities=35% Similarity=0.478 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++++++ +|+++++.+.. ..+..+.+++..+|
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~-----~li~~~~~~~~--------------------------~~~~~a~~i~~~lg 55 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV-----GVIVGTTGGSG--------------------------EFSGAAGQLAYHLG 55 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce-----EEEEEECCCCc--------------------------cccHHHHHHHHHhC
Confidence 578999999999999999887776 99999865331 13566789999999
Q ss_pred C-CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 162 F-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 162 l-~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
+ ++|++++..+|+|++.||..|+++|++|++|.+||+++|. +
T Consensus 56 ~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------------~ 98 (254)
T cd00327 56 ISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------------F 98 (254)
T ss_pred CCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------------e
Confidence 9 8999999999999999999999999999999999999985 4
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++|||++++||++.+.+++++.+++++|.++....++.+.. +........++++++|+++|++++|||++++|.++++.
T Consensus 99 ~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 99 VFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred eecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc
Confidence 68999999999999999999999999999998877654322 23445678899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
.|..|.......+... .+++...+..+||+.+|++++.+..++++++.+.+||. .
T Consensus 178 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~---------------------~ 232 (254)
T cd00327 178 GDAVELALGLDPDGVR----SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT---------------------P 232 (254)
T ss_pred ccHHHHHHHHHHhCCC----CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC---------------------C
Confidence 9999887766554432 37889999999999999999999999999999998871 1
Q ss_pred CCCcEEEEeccccccceeeeEe
Q 014349 401 MPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl 422 (426)
.+.+.++++++|+||++.++||
T Consensus 233 ~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 233 REPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CCcCEEEEeeEcCCCcceEEEC
Confidence 2356899999999999999986
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=226.98 Aligned_cols=272 Identities=21% Similarity=0.310 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|+|+++.+++ .|++|+..... .. ...+..++..+|
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID-----~vi~g~~~~~~-------------------------~~-~~~a~~va~~lG 74 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVD-----EVILGQVLTAG-------------------------AG-QNPARQAAIKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEecCCC-------------------------CC-CcHHHHHHHHcC
Confidence 468999999999999999998887 89998743110 01 124456889999
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH----------------HHHH------hh---
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------------MAGF------CK--- 214 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~----------------~~~~------~~--- 214 (426)
+. -|+++|+++|+|++.||..|+++|++|.+|++||+|+|.+..... +..+ ..
T Consensus 75 l~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK05656 75 LPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFND 154 (393)
T ss_pred CCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccC
Confidence 96 489999999999999999999999999999999999997654110 0000 00
Q ss_pred --hhh----cccccC------------------C-CCCCCCc----cccc------------------------------
Q 014349 215 --SRA----LTTKYN------------------G-TPQEASR----PFDC------------------------------ 235 (426)
Q Consensus 215 --~~~----l~~~~~------------------~-~~~~~~~----pf~~------------------------------ 235 (426)
++. +...++ . .|....+ |+..
T Consensus 155 ~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 234 (393)
T PRK05656 155 YHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCC
Confidence 000 000000 0 0111000 1100
Q ss_pred --CCCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 014349 236 --GRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306 (426)
Q Consensus 236 --~~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 306 (426)
..+|.+ ++|||+++||++++.|++++.+++++|.|++... ..|...+.+...+++++|+++|++|+
T Consensus 235 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~-----~~~~~~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK05656 235 AFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAG-----VDPAIMGIGPVSATRRCLDKAGWSLA 309 (393)
T ss_pred CcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEec-----CCCcccchhHHHHHHHHHHHcCCCHH
Confidence 023445 8999999999999999999999999999998875 34555555678999999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Q 014349 307 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 386 (426)
Q Consensus 307 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~ 386 (426)
|||++|+|.+ +..|..++.+.|+... .+++++..|..+||+.+|+|+..++.++++|+.
T Consensus 310 dId~~e~~d~-----f~~~~~~~~e~lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~-------------- 368 (393)
T PRK05656 310 ELDLIEANEA-----FAAQSLAVGKELGWDA--AKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR-------------- 368 (393)
T ss_pred HCCEEEecCc-----cHHHHHHHHHHhCCCC--ccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH--------------
Confidence 9999999943 4456666677776432 367888899999999999999999999998864
Q ss_pred CCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 387 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
...|+++++...-||...++||++
T Consensus 369 --------------~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 369 --------------RDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred --------------cCCCEEEEEEcccCcceEEEEEec
Confidence 125689999999999999999986
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=230.03 Aligned_cols=285 Identities=19% Similarity=0.194 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ .+++|+.... .. ....+..++..+|
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID-----~vi~g~~~~~--------------------~~------~~~~a~~v~~~lG 69 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIE-----LVVVGSTAYR--------------------GI------ELYPAPIVAEYSG 69 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccc--------------------cc------cCChHHHHHHHhC
Confidence 468999999999999999998887 8888864311 00 0122456889999
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH--------------------------HHHhh
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------------------------AGFCK 214 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~--------------------------~~~~~ 214 (426)
+++ +.++|+++|+|++.||..|+++|++|++|.+||+|+|.+...... ..+..
T Consensus 70 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a 149 (385)
T PRK12578 70 LTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYA 149 (385)
T ss_pred CCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHH
Confidence 976 778999999999999999999999999999999999975432100 00000
Q ss_pred hhhccccc------------------CCCCCCCC----------------cccccCCCcceeccceEEEEecchHHHHhc
Q 014349 215 SRALTTKY------------------NGTPQEAS----------------RPFDCGRDGFVIGEGSGVLVLEELEHAKKR 260 (426)
Q Consensus 215 ~~~l~~~~------------------~~~~~~~~----------------~pf~~~~~G~~~geGa~alvL~~~~~A~~~ 260 (426)
...+. ++ ..+|.... .|+ ...+...++|||+++||++++.|++.
T Consensus 150 ~~~m~-~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l 227 (385)
T PRK12578 150 TRHMA-VYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKEL 227 (385)
T ss_pred HHHHH-HhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhc
Confidence 00000 00 00111111 111 12233448999999999999999998
Q ss_pred CCeeeEEEEeEEEecCCCCCC-CCCCCh-HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh-hcc-
Q 014349 261 GAKIYAEVRGYGMSGDAHHIT-QPHIDG-KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVF-SDH- 336 (426)
Q Consensus 261 g~~~~a~i~g~~~~~d~~~~~-~~~~~~-~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~-~~~- 336 (426)
+.++.++|.|++..++..+.. .|+... .+...+++++|+++|++|+|||++|+|.+.+.. |..+++.+- ..+
T Consensus 228 ~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~~----~l~~le~lGl~~~G 303 (385)
T PRK12578 228 KIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTIA----EIMGYEDLGFTEKG 303 (385)
T ss_pred CCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH----HHHHHHHcCCCCCC
Confidence 866779999999987765432 223222 245689999999999999999999999665533 665555542 111
Q ss_pred -----------cCCCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCC-C
Q 014349 337 -----------ATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM-P 402 (426)
Q Consensus 337 -----------~~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~-~ 402 (426)
..++++|||...+. .||+.+|+|+.+++++++||+... ...|.. .
T Consensus 304 ~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~a---------------------g~~qv~~~ 362 (385)
T PRK12578 304 KGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEA---------------------GKLQQPLK 362 (385)
T ss_pred chHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCc---------------------ccCcCCcc
Confidence 22456799999884 599999999999999999999753 112222 2
Q ss_pred CcEEEEeccc-cccceeeeEeee
Q 014349 403 ISAALSNSFG-FGGTNASLLFTK 424 (426)
Q Consensus 403 ~~~~l~~~~g-~gG~~~~~vl~~ 424 (426)
.+.+++.+.| .|.++.++||++
T Consensus 363 ~~~~l~~~~Gg~~~~~~~~v~~~ 385 (385)
T PRK12578 363 KYIGLVHNVGGTGHFAYVMILRR 385 (385)
T ss_pred hheEEEeccCcchhhEEEEEEeC
Confidence 4688888887 666677777764
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=229.50 Aligned_cols=270 Identities=20% Similarity=0.275 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.++++++|+++|+++.+++ .|++|+..... .....+..++...|
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id-----~vv~G~~~~~~--------------------------~g~~~~r~~~~~~G 75 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVN-----EVILGQVITGG--------------------------SGQNPARQTLIHAG 75 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCccc--------------------------cccHHHHHHHHHCC
Confidence 357889999999999999998887 89998743221 01234456778889
Q ss_pred CC-C-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH-H-H---------H-----Hhh--------
Q 014349 162 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS-M-A---------G-----FCK-------- 214 (426)
Q Consensus 162 l~-g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~-~-~---------~-----~~~-------- 214 (426)
+. + |+++|+++|+||+.|+..|++.|++|++|++||+|+|++.. |.. . . . +..
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T PRK06633 76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGV 155 (392)
T ss_pred CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcc
Confidence 96 3 99999999999999999999999999999999999998763 210 0 0 0 000
Q ss_pred -hhhccccc----C------------------CCCCCC-C----cccc-----------------------c--------
Q 014349 215 -SRALTTKY----N------------------GTPQEA-S----RPFD-----------------------C-------- 235 (426)
Q Consensus 215 -~~~l~~~~----~------------------~~~~~~-~----~pf~-----------------------~-------- 235 (426)
++..++.+ + ..|... . .|.. .
T Consensus 156 ~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~ 235 (392)
T PRK06633 156 FMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAF 235 (392)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCcc
Confidence 00000000 0 000000 0 0110 0
Q ss_pred CCCc-------ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 014349 236 GRDG-------FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 308 (426)
Q Consensus 236 ~~~G-------~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 308 (426)
+..| ..++|||+++||++++.|++++.+++++|.|++...+ .|...+.....+++++|+++|++|+||
T Consensus 236 ~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~-----~~~~~~~~~~~a~~~Al~~AGl~p~DI 310 (392)
T PRK06633 236 DKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGV-----DPSIMGTAPVPASQKALSKAGWSVNDL 310 (392)
T ss_pred CCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CcchhchHHHHHHHHHHHHcCCCHHHc
Confidence 0112 3489999999999999999999999999999998764 333333456789999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Q 014349 309 DYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 385 (426)
Q Consensus 309 d~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~ 385 (426)
|++|+| |++++.+++..+..+ .+++++..|..+||+.||||+.+++.++++|++.
T Consensus 311 D~~ei~----------dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~------------ 368 (392)
T PRK06633 311 EVIEVN----------EAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA------------ 368 (392)
T ss_pred Ceeehh----------hHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc------------
Confidence 999999 999999998764322 3567788888999999999999999999999752
Q ss_pred CCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 386 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++....-||...++||++.
T Consensus 369 ----------------~~~~g~~~~c~~gG~g~a~~~e~~ 392 (392)
T PRK06633 369 ----------------KAKKGLVTLCIGGGMGMAMCVEAV 392 (392)
T ss_pred ----------------CCCeEEEEEecccChhheEEEEeC
Confidence 135788888888999999999874
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=227.44 Aligned_cols=291 Identities=21% Similarity=0.289 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+...|+.+++++||+|+|+++.+++ ++++|++.+.... . ....+..++..+
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id-----~vi~g~~~~~~~~----------------------~--~~~~a~~va~~l 71 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDID-----AMYVGNMSAGLFV----------------------S--QEHIAALIADYA 71 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccccc----------------------c--cccHHHHHHHHc
Confidence 3478899999999999999988887 8888874322100 0 012456789999
Q ss_pred CCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH--HH-H--------Hh---------hhhhcc
Q 014349 161 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--MA-G--------FC---------KSRALT 219 (426)
Q Consensus 161 gl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~--~~-~--------~~---------~~~~l~ 219 (426)
|++ .|.++++++|+|++.||..|+++|++|++|++||+|.|.+..... .. . +. ..+.+.
T Consensus 72 Gl~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a 151 (389)
T PRK06064 72 GLAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIA 151 (389)
T ss_pred CCCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHH
Confidence 998 599999999999999999999999999999999999986432110 00 0 00 000000
Q ss_pred ----cccC------------------CCCCCC----------------CcccccCCCcceeccceEEEEecchHHHHhcC
Q 014349 220 ----TKYN------------------GTPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRG 261 (426)
Q Consensus 220 ----~~~~------------------~~~~~~----------------~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g 261 (426)
..++ .+|... +.|+. ..+...++|||+++||++++.|++++
T Consensus 152 ~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~ 230 (389)
T PRK06064 152 RRYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYT 230 (389)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhc
Confidence 0000 011100 01111 23444689999999999999999987
Q ss_pred CeeeEEEEeEEEecCCCCCCC-CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hhcc--
Q 014349 262 AKIYAEVRGYGMSGDAHHITQ-PHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDH-- 336 (426)
Q Consensus 262 ~~~~a~i~g~~~~~d~~~~~~-~~~-~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~-~~~~-- 336 (426)
.++ ++|.|++...+..+... ++. .......+++++|+++|++++|||++|+|++.|.. +..+++.+ |..+
T Consensus 231 ~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~----~~~~~e~lgl~~~G~ 305 (389)
T PRK06064 231 DTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIA----EILAYEDLGFAKKGE 305 (389)
T ss_pred CCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHH----HHHHHHHcCCCCCCc
Confidence 665 69999999887665332 221 23456789999999999999999999999988864 55555555 2211
Q ss_pred ----------cCCCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCc
Q 014349 337 ----------ATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 404 (426)
Q Consensus 337 ----------~~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (426)
..++++|+|..++. .||+.+|+|+..++++++||+.+.- . ...|-...+
T Consensus 306 ~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~------------------~-g~rqv~~a~ 366 (389)
T PRK06064 306 GGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAE------------------K-GRQQVIGAG 366 (389)
T ss_pred hHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCC------------------C-CCccCCCcc
Confidence 11356799999995 6999999999999999999998530 0 122334567
Q ss_pred EEEEeccc-cccceeeeEeeec
Q 014349 405 AALSNSFG-FGGTNASLLFTKC 425 (426)
Q Consensus 405 ~~l~~~~g-~gG~~~~~vl~~~ 425 (426)
.+++.++| .+..++.+||++.
T Consensus 367 ~~l~~~~g~~~~~~~~~vl~~~ 388 (389)
T PRK06064 367 YGLTHNVGGTGHTAVVHILSRK 388 (389)
T ss_pred EEEEecCCCccceEEEEEEEec
Confidence 89998887 4456778888764
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=228.97 Aligned_cols=269 Identities=24% Similarity=0.325 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++.+++ .+++++..+.. . ....+..++..+|
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID-----~vi~~~~~~~~---------------------~-----~~~~a~~v~~~lG 70 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD-----DVIMGNVLQAG---------------------E-----GQNPARQAALLAG 70 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-----EEEEEeccCCC---------------------C-----CChHHHHHHHHcC
Confidence 478999999999999999998887 88887643211 0 1123456889999
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH--------------------HHhh-----
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA--------------------GFCK----- 214 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~--------------------~~~~----- 214 (426)
++. |.++|+++|+|++.+|..|+++|++|.+|.|||+|+|.+....... .+..
T Consensus 71 l~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (386)
T cd00751 71 LPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGL 150 (386)
T ss_pred CCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCC
Confidence 974 8999999999999999999999999999999999988753211000 0000
Q ss_pred -hhhcccc----c--------------------CCC-----------------------CCCCCc------------cc-
Q 014349 215 -SRALTTK----Y--------------------NGT-----------------------PQEASR------------PF- 233 (426)
Q Consensus 215 -~~~l~~~----~--------------------~~~-----------------------~~~~~~------------pf- 233 (426)
.+..+.+ + +.. |+...| |.
T Consensus 151 ~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~ 230 (386)
T cd00751 151 SMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAF 230 (386)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCc
Confidence 0000000 0 000 011111 11
Q ss_pred c-----cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 014349 234 D-----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQV 308 (426)
Q Consensus 234 ~-----~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 308 (426)
+ ...+...++||++++||++++.|++++.+++++|.|++..++.. .....+...+++++|+++||+|+||
T Consensus 231 ~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~a~~~Agi~~~di 305 (386)
T cd00751 231 KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDP-----AIMGIGPVPAIPKALKRAGLTLDDI 305 (386)
T ss_pred CCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCC-----cccchhHHHHHHHHHHHcCCCHHHc
Confidence 1 11233347999999999999999999999999999999887532 2233455789999999999999999
Q ss_pred cEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Q 014349 309 DYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 385 (426)
Q Consensus 309 d~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~ 385 (426)
|++|+| |.+++..++..+..+ .+++++..+..+||+.+|+|+.+++++++||+..
T Consensus 306 d~~e~~----------d~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~------------ 363 (386)
T cd00751 306 DLIEIN----------EAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR------------ 363 (386)
T ss_pred CEEEee----------chhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc------------
Confidence 999999 777776666544322 1344444444889999999999999999999863
Q ss_pred CCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 386 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
..|+++++..+-||..+++||++
T Consensus 364 ----------------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 ----------------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred ----------------CCCEEEEEEcccccceEEEEEEC
Confidence 24689999999999999999985
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-26 Score=222.30 Aligned_cols=271 Identities=23% Similarity=0.274 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 82 FIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dA-Gl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...|+.+|+++||+++ |+++.+++ .|++|+..... . .....+..+....
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID-----~vi~g~~~~~~----------------------~---~~~~~ar~~~~~~ 80 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIE-----DAIVGCAMPEA----------------------E---QGLNVARIGALLA 80 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCC-----EEEEEecCCCC----------------------C---CCchHHHHHHHHc
Confidence 4789999999999997 99998888 89999743210 0 0112223345556
Q ss_pred CCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH--------HHHh---------hhhh----
Q 014349 161 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------AGFC---------KSRA---- 217 (426)
Q Consensus 161 gl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~--------~~~~---------~~~~---- 217 (426)
|+. -|+++|+++|+|++.|+..|+++|++|++|++||+|+|.++..... ..+. .++.
T Consensus 81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (399)
T PRK09052 81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEK 160 (399)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHH
Confidence 886 3799999999999999999999999999999999999987543200 0000 0000
Q ss_pred ccccc-----------------------C-C-----CCCC--CC------------cc-ccc------------------
Q 014349 218 LTTKY-----------------------N-G-----TPQE--AS------------RP-FDC------------------ 235 (426)
Q Consensus 218 l~~~~-----------------------~-~-----~~~~--~~------------~p-f~~------------------ 235 (426)
+..++ . . .|.. .. .| +..
T Consensus 161 ~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 240 (399)
T PRK09052 161 VAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP 240 (399)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCC
Confidence 00000 0 0 0000 00 00 000
Q ss_pred --CCCc-------ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 014349 236 --GRDG-------FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306 (426)
Q Consensus 236 --~~~G-------~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 306 (426)
..+| ..++|||+++||++++.|++++.+++++|.|++.... .|...+.+...+++++|+++|++|+
T Consensus 241 ~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~A~~~al~~Agi~~~ 315 (399)
T PRK09052 241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGV-----PPEIMGIGPIEAIPAALKQAGLKQD 315 (399)
T ss_pred ccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecc-----CCCccchhHHHHHHHHHHHcCCCHH
Confidence 0112 3489999999999999999999999999999998763 3444445668999999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhhcccCC-Ccceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Q 014349 307 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383 (426)
Q Consensus 307 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~-~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~ 383 (426)
|||++|+| |++++..+...+..+ .+.|+|..++ .+||+.||+|+.+++.++++|+++
T Consensus 316 did~~ei~----------D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~---------- 375 (399)
T PRK09052 316 DLDWIELN----------EAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT---------- 375 (399)
T ss_pred HcCEEEeC----------cHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc----------
Confidence 99999999 666665554433322 2357888898 789999999999999999999862
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++...+-||...++||++.
T Consensus 376 ------------------~~~~g~~~~c~~gg~g~a~~~e~~ 399 (399)
T PRK09052 376 ------------------NLKYGMVTMCVGTGMGAAGIFERL 399 (399)
T ss_pred ------------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 135788888999999999999874
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=225.14 Aligned_cols=271 Identities=21% Similarity=0.297 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++.+++ .|++|+..... .....++..++..+|
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID-----~vi~G~~~~~~-------------------------~~~~~~a~~i~~~lG 76 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVE-----DVIMGCANPEG-------------------------ATGANIARQIALRAG 76 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----cEEEEEeeccc-------------------------ccccHHHHHHHHHcC
Confidence 578999999999999999998887 78888743221 001236678888889
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH----------HHH------Hhhhhh----cc
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------MAG------FCKSRA----LT 219 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~----------~~~------~~~~~~----l~ 219 (426)
+. .|+++|+++|+|++.||..|+++|++|++|++||+|+|+++.... ... +..++. +.
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a 156 (392)
T PRK07108 77 LPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVA 156 (392)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHH
Confidence 86 699999999999999999999999999999999999998764210 000 000000 00
Q ss_pred ccc----------------------C-C----------------CCCC--------------C------------Cc-cc
Q 014349 220 TKY----------------------N-G----------------TPQE--------------A------------SR-PF 233 (426)
Q Consensus 220 ~~~----------------------~-~----------------~~~~--------------~------------~~-pf 233 (426)
..+ + . +|.. . .+ +|
T Consensus 157 ~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~ 236 (392)
T PRK07108 157 KRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL 236 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC
Confidence 000 0 0 0100 0 00 11
Q ss_pred c----cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 014349 234 D----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 309 (426)
Q Consensus 234 ~----~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 309 (426)
. ...+.-.++|||+++||++++.|++++.+++++|.|++...+ .|+....+...+++++|+++|++|+|||
T Consensus 237 ~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~Did 311 (392)
T PRK07108 237 PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGC-----EPDEMGIGPVFAVPKLLKQAGLKVDDID 311 (392)
T ss_pred CCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCcccchhHHHHHHHHHHHcCCCHHHcC
Confidence 0 011223389999999999999999999999999999998763 3444445668999999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Q 014349 310 YVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 386 (426)
Q Consensus 310 ~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~ 386 (426)
++|+| |++++.+++..+..+ .+++++..+..+||+.||+|+..++.++.+|++.
T Consensus 312 ~~ei~----------eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~------------- 368 (392)
T PRK07108 312 LWELN----------EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR------------- 368 (392)
T ss_pred chHhh----------hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh-------------
Confidence 99999 999999998765433 2455556666899999999999999999999752
Q ss_pred CCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 387 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++....-||...++||++.
T Consensus 369 ---------------~~~~g~~~~c~~gg~g~a~~ie~~ 392 (392)
T PRK07108 369 ---------------GAKYVVVTMCIGGGQGAAGLFEVL 392 (392)
T ss_pred ---------------CCCEEEEEEccccChhhEEEEEeC
Confidence 245788888999999999999873
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=225.58 Aligned_cols=269 Identities=23% Similarity=0.275 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 82 FIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 82 ~~~l~~~a~~~Al~d-AGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...|+.++.+++|++ +|+++++++ .||+|+.... +.....++..++...
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id-----~vi~G~~~~~-------------------------~~~g~~~ar~~~l~~ 75 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAID-----DVIYGCANQA-------------------------GEDNRNVARMSLLLA 75 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-----EEEEEecccc-------------------------ccccccHHHHHHHHc
Confidence 356888899999994 799998888 8999974311 000134566788889
Q ss_pred CCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH-H----HH-------hh--------h---
Q 014349 161 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-A----GF-------CK--------S--- 215 (426)
Q Consensus 161 gl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~-~----~~-------~~--------~--- 215 (426)
||.. |+++|++.|+||+.|+..|++.|++|++|++|++|+|+++....+ . .+ .. .
T Consensus 76 Gl~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T PRK13359 76 GLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMK 155 (400)
T ss_pred CCCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccc
Confidence 9964 999999999999999999999999999999999999998753210 0 00 00 0
Q ss_pred hhc------------ccccCC-------------------CCC-------------------------CCCcc-------
Q 014349 216 RAL------------TTKYNG-------------------TPQ-------------------------EASRP------- 232 (426)
Q Consensus 216 ~~l------------~~~~~~-------------------~~~-------------------------~~~~p------- 232 (426)
... ..+++- .+. ...||
T Consensus 156 ~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~ 235 (400)
T PRK13359 156 QLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALA 235 (400)
T ss_pred cccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHh
Confidence 000 000000 000 00111
Q ss_pred -----cccCCCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHH
Q 014349 233 -----FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300 (426)
Q Consensus 233 -----f~~~~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~ 300 (426)
|+ .+|.+ ++|||+++||++++.|++++.+++++|.|++... ..|.+.+.+...+++++|++
T Consensus 236 ~l~p~f~--~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~A~~~al~~ 308 (400)
T PRK13359 236 KLKGVVR--PDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLAR 308 (400)
T ss_pred cCCCccC--CCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEec-----CCCCccchhHHHHHHHHHHH
Confidence 22 12222 8999999999999999999999999999998874 23444556678999999999
Q ss_pred cCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---Ccceecccccc--cchhHHhHHHHHHHHHHHHHHhCCc
Q 014349 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVA 375 (426)
Q Consensus 301 agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~ 375 (426)
+|++|+|||++|+| |++++..+...+..+ ...|+|+.++. +||+.+|+|+..++.++.||+..
T Consensus 309 AGl~~~DID~iei~----------dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~-- 376 (400)
T PRK13359 309 LGMTLDQFDVIELN----------EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERT-- 376 (400)
T ss_pred hCCCHHHcCcCccC----------cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc--
Confidence 99999999999999 777665554433322 35799999995 89999999999999999999752
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 376 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 376 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++....-||...++||++.
T Consensus 377 --------------------------~~~~g~~~~c~~gG~g~a~~ie~~ 400 (400)
T PRK13359 377 --------------------------GGRFALCTMCIGVGQGIAIAIERV 400 (400)
T ss_pred --------------------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 245788888888999999999873
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-26 Score=222.81 Aligned_cols=272 Identities=26% Similarity=0.341 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++++++ .|++|+..... ......+..++...|
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID-----~vi~g~~~~~~-------------------------~~~~~~a~~~~~~~G 76 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVG-----HVVFGHVIPTE-------------------------PRDMYLSRVAAINAG 76 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEeeecccc-------------------------CCCccHHHHHHHHcC
Confidence 468999999999999999998887 88888743210 000123334556678
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH----------------HH----HHhh-----
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------------MA----GFCK----- 214 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~----------------~~----~~~~----- 214 (426)
+. -|+++|+++|+|++.|+..|+++|++|.+|++||+|+|.++.... .. .+..
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T PRK09051 77 VPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTI 156 (394)
T ss_pred CCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 85 499999999999999999999999999999999999998764210 00 0000
Q ss_pred -hhhccc----cc-------------------C------------------------CCCCCCCc------------ccc
Q 014349 215 -SRALTT----KY-------------------N------------------------GTPQEASR------------PFD 234 (426)
Q Consensus 215 -~~~l~~----~~-------------------~------------------------~~~~~~~~------------pf~ 234 (426)
++.... ++ . .+|+...| |+.
T Consensus 157 ~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~ 236 (394)
T PRK09051 157 HMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVF 236 (394)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcc
Confidence 000000 00 0 01332222 221
Q ss_pred cCCCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 014349 235 CGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 307 (426)
Q Consensus 235 ~~~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 307 (426)
...+|.+ ++|||+++||++++.|++++.+++++|.|++.... .|.....+...+++++|+++|++|+|
T Consensus 237 ~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~agi~~~d 311 (394)
T PRK09051 237 KKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGV-----DPEYMGIGPVPATQKALERAGLTVAD 311 (394)
T ss_pred cCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecc-----CCCcccccHHHHHHHHHHHcCCCHHH
Confidence 1111333 68999999999999999999999999999988763 33333445688999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Q 014349 308 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 385 (426)
Q Consensus 308 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~ 385 (426)
||++|+|.. +.++..++.+.|+.. +.||+..++ .+||+.+|+|+..++.++++|+++
T Consensus 312 id~~ei~d~-----f~~~~~~~~e~lg~~----~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~------------ 370 (394)
T PRK09051 312 LDVIEANEA-----FAAQACAVTRELGLD----PAKVNPNGSGISLGHPVGATGAIITVKALYELQRI------------ 370 (394)
T ss_pred cCEEEecCc-----cHHHHHHHHHHhCCC----ccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc------------
Confidence 999999921 223333344444432 235666666 689999999999999999999752
Q ss_pred CCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 386 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++....-||...++||++.
T Consensus 371 ----------------~~~~g~~~~c~~gG~g~a~~~e~~ 394 (394)
T PRK09051 371 ----------------GGRYALVTMCIGGGQGIAAIFERL 394 (394)
T ss_pred ----------------CCCEEEEEEccccChhhEEEEEeC
Confidence 245788888899999999999874
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=224.15 Aligned_cols=270 Identities=22% Similarity=0.274 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHH-HcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 83 IAYALCAADEALH-DAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 83 ~~l~~~a~~~Al~-dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
..|+.++++++|+ ++|+++.+++ .|++|+.... +......+..++...|
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id-----~v~~G~~~~~-------------------------~~~~~~~ar~~~~~~G 75 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID-----DVIYGCANQA-------------------------GEDNRNVARMAALLAG 75 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-----EEEEEecccc-------------------------ccccccHHHHHHHHcC
Confidence 6788999999999 6899998887 8999874311 0101234556889999
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH-------H---------------------H
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-------A---------------------G 211 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~-------~---------------------~ 211 (426)
+. -|+++|+++|+||+.|+..|++.|++|++|++||+|+|+++..... . .
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T TIGR02430 76 LPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKA 155 (400)
T ss_pred CCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCccccc
Confidence 96 3999999999999999999999999999999999999998653210 0 0
Q ss_pred -Hh--hhhh----ccccc----------------------------------------C----CCCCCCCc---------
Q 014349 212 -FC--KSRA----LTTKY----------------------------------------N----GTPQEASR--------- 231 (426)
Q Consensus 212 -~~--~~~~----l~~~~----------------------------------------~----~~~~~~~~--------- 231 (426)
+. .++. +..++ + .+|+...|
T Consensus 156 ~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~ 235 (400)
T TIGR02430 156 LYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLA 235 (400)
T ss_pred ccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHh
Confidence 00 0000 00000 0 01222111
Q ss_pred ---c-ccc-----CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 014349 232 ---P-FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSG 302 (426)
Q Consensus 232 ---p-f~~-----~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~ag 302 (426)
| |+. ..+...++|||+++||++++.|++++.+++++|.|++.... .|.....+...+++++|+++|
T Consensus 236 ~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~Ag 310 (400)
T TIGR02430 236 KLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGV-----EPRIMGIGPVPATQKLLARAG 310 (400)
T ss_pred cCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccchHHHHHHHHHHHhC
Confidence 0 111 11222389999999999999999999889999999987753 233334456889999999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---Ccceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCC
Q 014349 303 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPL 377 (426)
Q Consensus 303 l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp 377 (426)
++|+|||++|+| |++++..+...+..+ ...|+++.++ .+||+.+|+|+..++.+++||+..
T Consensus 311 l~~~DID~~ei~----------D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~---- 376 (400)
T TIGR02430 311 LSIDQFDVIELN----------EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERS---- 376 (400)
T ss_pred CCHHHCCCcccC----------cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc----
Confidence 999999999999 666554443332221 2368999999 489999999999999999999752
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 378 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++....-||...++||+++
T Consensus 377 ------------------------~~~~g~~~~c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 377 ------------------------GGRYALCTMCIGVGQGIALAIERV 400 (400)
T ss_pred ------------------------CCCEEEEEEccccChhhEEEEEeC
Confidence 245788888888999999999873
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=221.65 Aligned_cols=271 Identities=21% Similarity=0.202 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|++++|+++|+++.+++ .|++|+..... ......+...+...|
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID-----~vi~G~~~~~~-------------------------~~~~~~~r~a~~~~G 77 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVD-----DVVLGCVTPVG-------------------------DQGADIARTAVLAAG 77 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCCCc-------------------------cccccHHHHHHHHcC
Confidence 457889999999999999998887 88998753210 001233445556778
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-----------HHH----Hhhhhhcc----c
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-----------MAG----FCKSRALT----T 220 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~-----------~~~----~~~~~~l~----~ 220 (426)
+. -|+++|+.+|+|++.||..|+++|++|.+|++||+|+|+++.... ... +..++..+ .
T Consensus 78 l~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~ 157 (402)
T PRK08242 78 LPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIAT 157 (402)
T ss_pred CCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHH
Confidence 83 489999999999999999999999999999999999998764220 000 00001000 0
Q ss_pred cc------------------C-----------------------CCCCCCCc------------c-cccCC---------
Q 014349 221 KY------------------N-----------------------GTPQEASR------------P-FDCGR--------- 237 (426)
Q Consensus 221 ~~------------------~-----------------------~~~~~~~~------------p-f~~~~--------- 237 (426)
++ . .+++...| | |+...
T Consensus 158 ~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~ 237 (402)
T PRK08242 158 KYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVA 237 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccc
Confidence 00 0 12223222 1 33210
Q ss_pred -----------------CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHH
Q 014349 238 -----------------DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300 (426)
Q Consensus 238 -----------------~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~ 300 (426)
+.-.++|||+++||++++.|+++|.+++++|.|++...+. |.....+...+++++|++
T Consensus 238 ~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~ 312 (402)
T PRK08242 238 LQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSD-----PTIMLTGPVPATRKALAK 312 (402)
T ss_pred cccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCC-----chhhcccHHHHHHHHHHH
Confidence 2224899999999999999999999999999999887542 222233446799999999
Q ss_pred cCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCC
Q 014349 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 377 (426)
Q Consensus 301 agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp 377 (426)
+|++++|||++|+| |++++..+...+..+ .+++++..+..+||+.||+|+..++.++++|+++
T Consensus 313 AGl~~~DID~~ei~----------daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~---- 378 (402)
T PRK08242 313 AGLTVDDIDLFELN----------EAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR---- 378 (402)
T ss_pred cCCCHHHCCEEEec----------chhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc----
Confidence 99999999999999 887776665443322 3455666666899999999999999999999752
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 378 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++....-||...++||++.
T Consensus 379 ------------------------~~~~g~~~~c~ggG~g~a~~~e~~ 402 (402)
T PRK08242 379 ------------------------GKRTALITLCVGGGMGIATIIERV 402 (402)
T ss_pred ------------------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 245788888888999999999873
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-26 Score=222.81 Aligned_cols=268 Identities=22% Similarity=0.267 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ ++++++..... .. ...+..++..+|
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID-----~vv~g~~~~~~---------------------~~-----~~~a~~va~~lG 69 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID-----DVIFGNVLQAG---------------------EQ-----QNIARQAALLAG 69 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC---------------------CC-----ChHHHHHHHHcC
Confidence 478999999999999999998887 88887632110 00 123456888889
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH-----------H------Hhhhh------
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA-----------G------FCKSR------ 216 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~-----------~------~~~~~------ 216 (426)
+. .|++.++++|+|++.+|..|+++|++|.+|.+||+|+|.+....... . ....+
T Consensus 70 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 149 (386)
T TIGR01930 70 LPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLN 149 (386)
T ss_pred CCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCcccccccc
Confidence 86 38999999999999999999999999999999999988743211000 0 00000
Q ss_pred -----hcccc----cCC------------------C-----------CC--------------CCC-cccc---------
Q 014349 217 -----ALTTK----YNG------------------T-----------PQ--------------EAS-RPFD--------- 234 (426)
Q Consensus 217 -----~l~~~----~~~------------------~-----------~~--------------~~~-~pf~--------- 234 (426)
..+.+ ++- . |. ... +|..
T Consensus 150 ~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~ 229 (386)
T TIGR01930 150 GLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKP 229 (386)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCC
Confidence 00000 000 0 10 000 0110
Q ss_pred --------cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 014349 235 --------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306 (426)
Q Consensus 235 --------~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 306 (426)
...+...++|||+++||++++.|++++.+++++|.|++.... .|........++++++|+++|++|+
T Consensus 230 i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~~ 304 (386)
T TIGR01930 230 AFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGV-----DPEIMGLGPVPAIPKALKKAGLSIS 304 (386)
T ss_pred CcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccccHHHHHHHHHHHcCCCHH
Confidence 012223369999999999999999999999999999988753 2222334457899999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhhcccCC-Ccceec--ccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Q 014349 307 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GSLAFS--STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383 (426)
Q Consensus 307 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~-~~~~v~--s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~ 383 (426)
|||++|+| |++++..++..+..+ +..|++ ..+..+||+.+|+|+.+++++++||+..
T Consensus 305 did~~e~~----------d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~---------- 364 (386)
T TIGR01930 305 DIDLFEIN----------EAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR---------- 364 (386)
T ss_pred HCCeeehc----------chhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc----------
Confidence 99999999 888888776554332 134454 4445889999999999999999999863
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
+.++++++..+-||..+++||+
T Consensus 365 ------------------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 ------------------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred ------------------CCCEEEEEEeccCCceEEEEeC
Confidence 2468899889999999999885
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=220.28 Aligned_cols=271 Identities=23% Similarity=0.276 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 82 FIAYALCAADEALH-DAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 82 ~~~l~~~a~~~Al~-dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...|+.++++++|+ ++|+++++++ .|++|+.... +.....++..++...
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id-----~v~~G~~~~~-------------------------~~~~~~~ar~~~~~~ 75 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVD-----DVIYGCANQA-------------------------GEDNRNVARMSALLA 75 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-----EEEEEecccc-------------------------ccccchHHHHHHHHc
Confidence 36788999999999 6899988887 8999874311 001123455688899
Q ss_pred CCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH-----HHH-------hh--------h---
Q 014349 161 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-----AGF-------CK--------S--- 215 (426)
Q Consensus 161 gl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~-----~~~-------~~--------~--- 215 (426)
|+. -|+++|+++|+||+.|+..|++.|++|++|++||+|+|+++..... ..+ .. .
T Consensus 76 Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK09050 76 GLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMK 155 (401)
T ss_pred CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccc
Confidence 994 4999999999999999999999999999999999999998653210 000 00 0
Q ss_pred hhcc------------ccc-----------------------CC---------------------CCCCCCcc-------
Q 014349 216 RALT------------TKY-----------------------NG---------------------TPQEASRP------- 232 (426)
Q Consensus 216 ~~l~------------~~~-----------------------~~---------------------~~~~~~~p------- 232 (426)
.... .++ +. +++...|+
T Consensus 156 ~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 156 AQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHH
Confidence 0000 000 00 01222221
Q ss_pred ------ccc-----CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 014349 233 ------FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 301 (426)
Q Consensus 233 ------f~~-----~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~a 301 (426)
|+. ..+...++|||+++||++++.|++++.+++++|+|++..... |.....+...+++++|+++
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~A 310 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVE-----PRIMGIGPAPATRKLLARL 310 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccC-----CccccchHHHHHHHHHHHc
Confidence 211 112223899999999999999999999999999999887532 2223345678999999999
Q ss_pred CCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---Ccceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcC
Q 014349 302 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAP 376 (426)
Q Consensus 302 gl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~p 376 (426)
|++|+|||++|+| |++++..+...+..+ ...|+|..++. +||+.+|+|+..++.+++||+.+
T Consensus 311 gl~~~DId~~ei~----------D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~--- 377 (401)
T PRK09050 311 GLTIDQFDVIELN----------EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT--- 377 (401)
T ss_pred CCCHHHCCccccC----------cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc---
Confidence 9999999999999 777665555433322 24799999995 89999999999999999999762
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 377 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 377 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++....-||...++|++++
T Consensus 378 -------------------------~~~~g~~~~c~~gG~g~a~~~e~~ 401 (401)
T PRK09050 378 -------------------------GGRYALCTMCIGVGQGIALAIERV 401 (401)
T ss_pred -------------------------CCCeEEEEEcccccceeEEEEEeC
Confidence 245788888889999999999874
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=223.63 Aligned_cols=271 Identities=19% Similarity=0.252 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|+|+++.+++ .|++|+..... ....++..++..+|
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID-----~vv~g~~~~~~--------------------------~~~~~a~~va~~~G 74 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARID-----DVIFGQGYPNG--------------------------EAPAIGRVAALDAG 74 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CCChHHHHHHHHcC
Confidence 468999999999999999998887 88998743221 01223456888889
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH----------------HHH------------
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------------MAG------------ 211 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~----------------~~~------------ 211 (426)
+. -|.++|+.+|+|++.||..|+++|++|.+|++||+|+|.+..... +..
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (404)
T PRK06205 75 LPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRR 154 (404)
T ss_pred CCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccc
Confidence 86 389999999999999999999999999999999999997653110 000
Q ss_pred Hh---hhh----hccccc-------------------C---------------------C----CCCCCCc---------
Q 014349 212 FC---KSR----ALTTKY-------------------N---------------------G----TPQEASR--------- 231 (426)
Q Consensus 212 ~~---~~~----~l~~~~-------------------~---------------------~----~~~~~~~--------- 231 (426)
+. .++ .+..++ . . +|+...|
T Consensus 155 ~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 155 FPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHh
Confidence 00 000 000000 0 0 1221111
Q ss_pred ---c-cc--------cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHH
Q 014349 232 ---P-FD--------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299 (426)
Q Consensus 232 ---p-f~--------~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~ 299 (426)
| |. ...+...++|||+++||++++.|++.+.+++++|.|++...+. |.....+...+++++|+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~ 309 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVE-----PSRMGIGPVPATEKALA 309 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CccccccHHHHHHHHHH
Confidence 1 10 1122233689999999999999999999999999999987642 22222355789999999
Q ss_pred HcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC------CcceecccccccchhHHhHHHHHHHHHHHHHHhC
Q 014349 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS------GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHG 373 (426)
Q Consensus 300 ~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~------~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~ 373 (426)
++|++|+|||++|+| |++++..+...+..+ .++.++..+..+||+.||+|+..++.+++||+..
T Consensus 310 ~Agl~~~Did~~ei~----------d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~ 379 (404)
T PRK06205 310 RAGLTLDDIDLIELN----------EAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR 379 (404)
T ss_pred HcCCCHHHCCEeeec----------cHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc
Confidence 999999999999999 888776666443322 1333444444789999999999999999999862
Q ss_pred CcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeecC
Q 014349 374 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 374 ~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
..+++|++...-||...++||++++
T Consensus 380 ----------------------------~~~~gl~~~c~~gg~g~a~~~e~~~ 404 (404)
T PRK06205 380 ----------------------------QARYGLETMCIGGGQGLAAVFERVN 404 (404)
T ss_pred ----------------------------CCCeEEEEEeccCChhhEEEEEecC
Confidence 2468999999999999999999875
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=220.95 Aligned_cols=270 Identities=22% Similarity=0.262 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCC
Q 014349 83 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 162 (426)
Q Consensus 83 ~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl 162 (426)
..|+.+++++||+++|+++.+++ .+++|+..... .....++..++...|+
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id-----~v~~G~~~~~~-------------------------~~~~~~ar~~~~~~Gl 76 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE-----DVILGCTNQAG-------------------------EDSRNVARNALLLAGL 76 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc-------------------------cccccHHHHHHHhcCC
Confidence 67899999999999999998888 89998743210 0001224457778888
Q ss_pred C--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH------------HHHhh-h------------
Q 014349 163 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM------------AGFCK-S------------ 215 (426)
Q Consensus 163 ~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~------------~~~~~-~------------ 215 (426)
. -|.++|+++|+||+.|+..|++.|++|++|++||+|+|+++..... ..+.. .
T Consensus 77 p~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T PRK08131 77 PVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQ 156 (401)
T ss_pred CCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccc
Confidence 6 4899999999999999999999999999999999999987643210 00000 0
Q ss_pred -h-----hc----ccccC---------------------CCC--CCCCccc-------------cc--------------
Q 014349 216 -R-----AL----TTKYN---------------------GTP--QEASRPF-------------DC-------------- 235 (426)
Q Consensus 216 -~-----~l----~~~~~---------------------~~~--~~~~~pf-------------~~-------------- 235 (426)
. .. ..+|+ ..+ .....|. +.
T Consensus 157 ~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~ 236 (401)
T PRK08131 157 YGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALT 236 (401)
T ss_pred cccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHh
Confidence 0 00 00010 000 0000011 10
Q ss_pred ------------CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 014349 236 ------------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 303 (426)
Q Consensus 236 ------------~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl 303 (426)
..+..-++|||+++||++++.|++++.+++++|.|++...+ .|.....+...+++++|+++||
T Consensus 237 ~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~-----~~~~~~~~~~~a~~~a~~~agl 311 (401)
T PRK08131 237 KLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGV-----EPRIMGIGPVEAIKKALARAGL 311 (401)
T ss_pred cCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecc-----CCccccchHHHHHHHHHHHcCC
Confidence 00334489999999999999999999899999999998864 2333334568899999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---Ccceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCC
Q 014349 304 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLT 378 (426)
Q Consensus 304 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~ 378 (426)
+|+|||++|+| |++++..+...+..+ ...|||..++ .+||+.||+|+.+++.+++||+..-
T Consensus 312 ~~~did~~ei~----------d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~---- 377 (401)
T PRK08131 312 TLDDMDIIEIN----------EAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRG---- 377 (401)
T ss_pred CHHHCCeehhc----------cHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcC----
Confidence 99999999999 999999888655544 2578999999 5799999999999999999998631
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 379 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.++.++....-||...++||++.
T Consensus 378 ------------------------~~~~~~~~~~ggg~g~a~i~e~~ 400 (401)
T PRK08131 378 ------------------------KRYAVVSLCIGVGQGLAMVIERV 400 (401)
T ss_pred ------------------------CCceEEEEEecCChhhEEEEEec
Confidence 12344555666778888999874
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=220.19 Aligned_cols=270 Identities=23% Similarity=0.322 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ ++++|+..... . ....+..+...+|
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID-----~vi~g~~~~~~-----------------------~---~~~~~~~~~~~~g 74 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVD-----EVIMGQVLQAG-----------------------A---GQNPARQAALKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----eEEEEEecCCC-----------------------C---CCcHHHHHHHHcC
Confidence 478999999999999999999887 88888643110 0 0112223555667
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH---------------H-HH------Hh----
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS---------------M-AG------FC---- 213 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~---------------~-~~------~~---- 213 (426)
+. -|.++++.+|+|++.||..|+++|++|++|++||+|+|.+..... . .. +.
T Consensus 75 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK05790 75 LPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNG 154 (393)
T ss_pred CCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCC
Confidence 75 489999999999999999999999999999999999997532110 0 00 00
Q ss_pred -hhhhccccc----C---------------------CC--------C---------------CCCCc------c------
Q 014349 214 -KSRALTTKY----N---------------------GT--------P---------------QEASR------P------ 232 (426)
Q Consensus 214 -~~~~l~~~~----~---------------------~~--------~---------------~~~~~------p------ 232 (426)
.++..++++ + .. | +...+ |
T Consensus 155 ~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~ 234 (393)
T PRK05790 155 YHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRP 234 (393)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCC
Confidence 000000000 0 00 0 00000 1
Q ss_pred -ccc-----CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 014349 233 -FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306 (426)
Q Consensus 233 -f~~-----~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 306 (426)
|+. ..+...++|||+++||++++.|++++.+++++|.|++.... .|.....+...+++++|+++|++|+
T Consensus 235 v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~~ 309 (393)
T PRK05790 235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGV-----DPAIMGIGPVPAIRKALEKAGWSLA 309 (393)
T ss_pred ccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccC-----CCCccchhHHHHHHHHHHHcCCCHH
Confidence 110 01344579999999999999999999999899999988753 2333334557899999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Q 014349 307 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383 (426)
Q Consensus 307 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~ 383 (426)
|||++|+| |.+++..+...+..+ .+++++..+..+||+.||+|+.+++.+++||+..
T Consensus 310 did~~e~~----------d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~---------- 369 (393)
T PRK05790 310 DLDLIEIN----------EAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR---------- 369 (393)
T ss_pred HCCEEEeC----------cHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc----------
Confidence 99999999 677666554433322 2455555556889999999999999999999863
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..|+++++..+-||..+++||+++
T Consensus 370 ------------------~~~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 370 ------------------GAKKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred ------------------CCCeEEEEEeccCCceeEEEEEcC
Confidence 236899999999999999999975
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=218.63 Aligned_cols=273 Identities=18% Similarity=0.246 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|+|+++.+++ .|++|+...... .....+..++..+|
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID-----~vv~G~~~~~~~-------------------------~~~~~~r~~a~~~G 120 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVG-----DIVVGTVLAPGS-------------------------QRANECRMAAFYAG 120 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCccc-------------------------ccchHHHHHHHHCC
Confidence 478999999999999999999888 888887432110 01122245667789
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHH------H---h-------hhhhc----c
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG------F---C-------KSRAL----T 219 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~------~---~-------~~~~l----~ 219 (426)
+.. |.++|+.+|+|++.|+..|+++|++|.+|++||+|+|.+........ + . .++.. .
T Consensus 121 l~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~ 200 (452)
T PLN02287 121 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVA 200 (452)
T ss_pred CCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHH
Confidence 864 88999999999999999999999999999999999998754220000 0 0 01100 0
Q ss_pred cccC------------------CCCCC-C----Cc-----------------ccccC-----------------------
Q 014349 220 TKYN------------------GTPQE-A----SR-----------------PFDCG----------------------- 236 (426)
Q Consensus 220 ~~~~------------------~~~~~-~----~~-----------------pf~~~----------------------- 236 (426)
.+++ ..|.. . .. +++.+
T Consensus 201 ~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g 280 (452)
T PLN02287 201 ERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNG 280 (452)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCC
Confidence 0000 00110 0 00 01100
Q ss_pred ----CCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 014349 237 ----RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 312 (426)
Q Consensus 237 ----~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~ 312 (426)
.+...++|||+++||++++.|++++.+|++++.+++... ..|.....+...+++++|+++||+|+|||++|
T Consensus 281 ~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~A~~~al~~Agl~~~DID~~E 355 (452)
T PLN02287 281 TTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVG-----VDPAVMGIGPAVAIPAAVKAAGLELDDIDLFE 355 (452)
T ss_pred CEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeecc-----CCCccchHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 133348999999999999999999999999999987543 23444455678999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC
Q 014349 313 AHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 389 (426)
Q Consensus 313 ~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~ 389 (426)
+| |++++.+++..+..+ .+++++..+..+||+.||||+.+++.++++|++.-
T Consensus 356 i~----------daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~~--------------- 410 (452)
T PLN02287 356 IN----------EAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRG--------------- 410 (452)
T ss_pred ec----------chHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhcC---------------
Confidence 99 999999998655433 23445555557899999999999999999997521
Q ss_pred CCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 390 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 390 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
...++++.....-||...++||++.
T Consensus 411 -----------~~~~~gl~~~c~ggG~g~a~~ie~~ 435 (452)
T PLN02287 411 -----------KDCRFGVVSMCIGTGMGAAAVFERG 435 (452)
T ss_pred -----------CCCCeeEEEEccccCceeEEEEEec
Confidence 0025788888889999999999985
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-26 Score=219.39 Aligned_cols=270 Identities=22% Similarity=0.296 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+.+.+++ .+++|+..... .. ...++..++..+|
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID-----~vi~g~~~~~~----------------------~~---g~~~a~~~~~~lG 76 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPID-----DLIIGCAMPEA----------------------EQ---GLNMARNIGALAG 76 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCC-----EEEEEeccccc----------------------cc---cchHHHHHHHHcC
Confidence 368999999999999998777777 88888643210 00 0223456888899
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-----------------H---HHHhhhhhcc
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-----------------M---AGFCKSRALT 219 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~-----------------~---~~~~~~~~l~ 219 (426)
+. -|.++|+++|+||+.|+..|++.|++|++|++||+|+|++..... + .++.... +.
T Consensus 77 l~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~-~~ 155 (391)
T PRK07661 77 LPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQ-VA 155 (391)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHH-HH
Confidence 97 399999999999999999999999999999999999998653210 0 0000000 00
Q ss_pred cccC------------------CCCCC----------------------------------CCc------------c-cc
Q 014349 220 TKYN------------------GTPQE----------------------------------ASR------------P-FD 234 (426)
Q Consensus 220 ~~~~------------------~~~~~----------------------------------~~~------------p-f~ 234 (426)
.+++ ..|.. ..+ | |.
T Consensus 156 ~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~ 235 (391)
T PRK07661 156 VKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFN 235 (391)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcC
Confidence 0000 00000 001 1 10
Q ss_pred -----cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 014349 235 -----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVD 309 (426)
Q Consensus 235 -----~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId 309 (426)
...+...++|||+++||++++.|++++.+++++|.|++.... .|.....+...+++++|+++|++|+|||
T Consensus 236 ~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~did 310 (391)
T PRK07661 236 VKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGV-----PPEVMGIGPIAAIPKALKLAGLELSDIG 310 (391)
T ss_pred CCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecC-----CCcccchHHHHHHHHHHHHcCCCHHHCC
Confidence 112223389999999999999999999999999999998864 3333445668899999999999999999
Q ss_pred EEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Q 014349 310 YVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 386 (426)
Q Consensus 310 ~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~ 386 (426)
++|+| |++++..+...+..+ .+++++..+..+||+.||||+.+++.++++|+++
T Consensus 311 ~~ei~----------d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~------------- 367 (391)
T PRK07661 311 LFELN----------EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR------------- 367 (391)
T ss_pred EEEeC----------CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc-------------
Confidence 99999 777776666543322 2445555566889999999999999999999752
Q ss_pred CCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 387 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+.++.+....+-||...++||++.
T Consensus 368 ---------------~~~~g~~~~c~~gg~g~a~~~e~~ 391 (391)
T PRK07661 368 ---------------NEQFGIVTMCIGGGMGAAGVFELL 391 (391)
T ss_pred ---------------CCCeEEEEEccccChhhEEEEEeC
Confidence 245788888889999999999863
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=219.55 Aligned_cols=288 Identities=18% Similarity=0.203 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++.+++ +++++..... ..+ .+.....++..+|
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID-----~vv~~~~~~~-----------------------~~g--~~~~~~~~~~~lG 86 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADID-----GSVASYFSDH-----------------------FQR--QLLAGIMVQDYLG 86 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEeccccc-----------------------ccc--cchhhHHHHHhcC
Confidence 468999999999999999988887 7776642110 000 0112234678899
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHH--Hh------------------hhhhccc
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG--FC------------------KSRALTT 220 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~--~~------------------~~~~l~~ 220 (426)
+.. |+++|+.+|+|+..||..|++.|++|.+|+|||+|+|.+.+...... +. ..+.+++
T Consensus 87 l~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ 166 (430)
T PRK06365 87 LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAV 166 (430)
T ss_pred CCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHH
Confidence 986 88999999999999999999999999999999999997654221000 00 0000000
Q ss_pred cc----C------------------CCCCCC-Ccccc--------------cCCCcceeccceEEEEecchHHHHhcCCe
Q 014349 221 KY----N------------------GTPQEA-SRPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGAK 263 (426)
Q Consensus 221 ~~----~------------------~~~~~~-~~pf~--------------~~~~G~~~geGa~alvL~~~~~A~~~g~~ 263 (426)
++ + .+|... ..|++ ...+...++|||+|+||.+++.|++.+.+
T Consensus 167 ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~ 246 (430)
T PRK06365 167 RHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDK 246 (430)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCC
Confidence 00 0 011100 00110 01122237999999999999999988766
Q ss_pred eeEEEEeEEEecCCCCCCC----------------------C-CCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCC
Q 014349 264 IYAEVRGYGMSGDAHHITQ----------------------P-HIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATST 318 (426)
Q Consensus 264 ~~a~i~g~~~~~d~~~~~~----------------------~-~~~~~~~~~a~~~al~~agl~--~~dId~v~~hgtgt 318 (426)
+ .+|.+++..+++..... + .........+++++|+++||+ ++|||++|+|
T Consensus 247 p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~---- 321 (430)
T PRK06365 247 P-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELH---- 321 (430)
T ss_pred C-eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEee----
Confidence 6 56677766554332111 0 011223457999999999997 7999999999
Q ss_pred CCCCHHHHHHHHHHhhcccC-------------------CCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCC
Q 014349 319 PLGDTVEATAIRTVFSDHAT-------------------SGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPL 377 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~-------------------~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp 377 (426)
|++++..+...+.. ++++|||...+. .||+.||+|+.+++.+++||+...-+.
T Consensus 322 ------D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~~ 395 (430)
T PRK06365 322 ------DAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKKH 395 (430)
T ss_pred ------cCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCCC
Confidence 66666666533221 256799988884 599999999999999999999864110
Q ss_pred CCCCCCCCCCCCCCCCcccc-CCCCCCcEEEEeccc-cccceeeeEeeecC
Q 014349 378 TLNLAKPDPIFNDNFMPLTA-SKDMPISAALSNSFG-FGGTNASLLFTKCQ 426 (426)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g-~gG~~~~~vl~~~~ 426 (426)
. . .. .|..+.+.+++.+.| .+..++++||++++
T Consensus 396 ~----------~------~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~~ 430 (430)
T PRK06365 396 F----------H------DDYLQVKNAKRGLIHSHAGTGTYVTVTILEAPK 430 (430)
T ss_pred C----------C------cccccCCCccEEEEecCCcccceEEEEEEecCC
Confidence 0 0 01 233456788998886 55677888888764
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=218.52 Aligned_cols=289 Identities=20% Similarity=0.234 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|+|+++++++ +|++|+..+... .. ..... ..+...++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId-----~vi~g~~~~~~~-----------------~~-----~~~~~--~~~~~~~g 72 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVD-----GIFLGHFNAGFS-----------------PQ-----DFPAS--LVLQADPA 72 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEecCCcc-----------------cc-----ccchh--HHHHHhcC
Confidence 468999999999999999998887 899886432210 00 00001 11233456
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH--------H-----------Hh-hhhhccc
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA--------G-----------FC-KSRALTT 220 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~--------~-----------~~-~~~~l~~ 220 (426)
++. |.++|+++|+|++.||..|+++|++|++|++||+|+|.+....... . +. .++....
T Consensus 73 l~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~ 152 (389)
T PRK07516 73 LRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQ 152 (389)
T ss_pred CCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHH
Confidence 654 8999999999999999999999999999999999999865321100 0 00 0000000
Q ss_pred cc----------------------CCCCCCCC-cccc------------------cCCCcceeccceEEEEecchHHHHh
Q 014349 221 KY----------------------NGTPQEAS-RPFD------------------CGRDGFVIGEGSGVLVLEELEHAKK 259 (426)
Q Consensus 221 ~~----------------------~~~~~~~~-~pf~------------------~~~~G~~~geGa~alvL~~~~~A~~ 259 (426)
++ ..+|.... +|++ ...+...++|||+|+||++++.|++
T Consensus 153 ~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~ 232 (389)
T PRK07516 153 AYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARA 232 (389)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHh
Confidence 00 00121100 1111 1234445899999999999999998
Q ss_pred cCCeeeEEEEeEEEecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh-hcc-
Q 014349 260 RGAKIYAEVRGYGMSGDAHHITQPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVF-SDH- 336 (426)
Q Consensus 260 ~g~~~~a~i~g~~~~~d~~~~~~~~~-~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~-~~~- 336 (426)
.+. .++|.|++...+..+....++ ...+...+++++|+++|++|+|||++|+|.+.+.. |...++.+- ..+
T Consensus 233 ~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~----~~~~~e~lg~~~~G 306 (389)
T PRK07516 233 LQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA----ELIEYEAMGLAPPG 306 (389)
T ss_pred cCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH----HHHHHHHcCCCCCC
Confidence 843 578999998877654332222 23566789999999999999999999999766665 444444431 111
Q ss_pred -----------cCCCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCC
Q 014349 337 -----------ATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 403 (426)
Q Consensus 337 -----------~~~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (426)
..++.+|||...+ .+||+.+|+|+.+++++++||+... ...|....
T Consensus 307 ~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a---------------------g~rQv~~a 365 (389)
T PRK07516 307 QGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA---------------------GGMQIPGA 365 (389)
T ss_pred chHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc---------------------cCCcCCch
Confidence 1235678988777 5699999999999999999999864 23334456
Q ss_pred cEEEEeccc-cccceeeeEeeecC
Q 014349 404 SAALSNSFG-FGGTNASLLFTKCQ 426 (426)
Q Consensus 404 ~~~l~~~~g-~gG~~~~~vl~~~~ 426 (426)
+.+++.+.| .+.+++.+||++.+
T Consensus 366 ~~~l~~~~gg~~~~~~~~vl~~~~ 389 (389)
T PRK07516 366 KLAGVFNMGGAAVANYVSILERVK 389 (389)
T ss_pred heeeeeccCcccceEEEEEEEecC
Confidence 788888887 55567777787753
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-26 Score=221.07 Aligned_cols=279 Identities=19% Similarity=0.226 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...+|+.+|+++||+|||+++++++ ++++|+..+... ....+...+
T Consensus 21 ~~~~La~~A~~~Al~dAGl~~~dID-----~~~~g~~~~~~~-----------------------------~~~~~~~~l 66 (391)
T PRK08256 21 DYPDMAAEAGRAALADAGIDYDAVQ-----QAYVGYVYGDST-----------------------------SGQRALYEV 66 (391)
T ss_pred CHHHHHHHHHHHHHHHcCCChHHCC-----eeEEEEEeCCcc-----------------------------hhHHHHHHc
Confidence 4578999999999999999988886 566654321100 001245678
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH---------HHHHh----------------
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS---------MAGFC---------------- 213 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~---------~~~~~---------------- 213 (426)
|+++ |.++++++|+|++.||..|+++|++|++|++||+|+|.+.. +.. +..+.
T Consensus 67 Gl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (391)
T PRK08256 67 GMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPAL 146 (391)
T ss_pred CCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccH
Confidence 9988 99999999999999999999999999999999999998642 110 00000
Q ss_pred -hhhhccccc----------------------CCCCCCCC-cccc--------------cCCCcceeccceEEEEecchH
Q 014349 214 -KSRALTTKY----------------------NGTPQEAS-RPFD--------------CGRDGFVIGEGSGVLVLEELE 255 (426)
Q Consensus 214 -~~~~l~~~~----------------------~~~~~~~~-~pf~--------------~~~~G~~~geGa~alvL~~~~ 255 (426)
..+...+++ ..+|.... +|.+ ...+...++|||+|+||.+++
T Consensus 147 ~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~ 226 (391)
T PRK08256 147 RMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEE 226 (391)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHH
Confidence 000000000 00111100 0110 011222379999999999999
Q ss_pred HHHhcCCeeeEEEEeEEEecCCCCCCCC-C---CC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHH
Q 014349 256 HAKKRGAKIYAEVRGYGMSGDAHHITQP-H---ID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIR 330 (426)
Q Consensus 256 ~A~~~g~~~~a~i~g~~~~~d~~~~~~~-~---~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~ 330 (426)
.|++.+.+++++|.|++...+....... + .. ......+++++|+++|++++|||++|+| |++++.
T Consensus 227 ~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~----------d~f~~~ 296 (391)
T PRK08256 227 FARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELH----------DCFSAN 296 (391)
T ss_pred HHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeec----------cCCcHH
Confidence 9998876677999998877654322111 1 11 1234679999999999999999999999 665555
Q ss_pred HHhhccc-------------------CCCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC
Q 014349 331 TVFSDHA-------------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN 389 (426)
Q Consensus 331 ~~~~~~~-------------------~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~ 389 (426)
.+...+. .++.+|||...+. .||+.+|+|+..++++++||+...
T Consensus 297 ~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~a--------------- 361 (391)
T PRK08256 297 ELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA--------------- 361 (391)
T ss_pred HHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCc---------------
Confidence 5543222 2356799999984 599999999999999999998753
Q ss_pred CCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 390 DNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 390 ~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
...|..+.+.+++++.|.+.++...||++
T Consensus 362 ------g~~Qv~~~~~~l~~~~G~~~~~~~~v~~~ 390 (391)
T PRK08256 362 ------GARQVEGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred ------CCCcCCccceEEEeccccceeEEEEEEec
Confidence 22233456789999999666666666764
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-25 Score=215.65 Aligned_cols=270 Identities=19% Similarity=0.207 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++.+++ .|++|+..... . ...++...+...|
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID-----~vi~G~~~~~~-------------------------~-~~~~~~~~~l~ag 79 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQID-----EVVMGCVLPAG-------------------------Q-GQAPARQAALGAG 79 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCCCc-------------------------c-chHHHHHHHHcCC
Confidence 378999999999999999998887 88998743110 0 1112233444456
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH----------------HHHH--hh----h--
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------------MAGF--CK----S-- 215 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~----------------~~~~--~~----~-- 215 (426)
+. -|+++|+.+|+||+.|+..|+++|++|++|++||+|+|++..... ...+ .. .
T Consensus 80 ~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
T PRK06954 80 LPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDK 159 (397)
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhccccccccccc
Confidence 53 478999999999999999999999999999999999998763110 0000 00 0
Q ss_pred --------hhcccccCC-------------------CCCCCC----ccccc-----------------------------
Q 014349 216 --------RALTTKYNG-------------------TPQEAS----RPFDC----------------------------- 235 (426)
Q Consensus 216 --------~~l~~~~~~-------------------~~~~~~----~pf~~----------------------------- 235 (426)
..+..+++- .+.... .|+..
T Consensus 160 ~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~ 239 (397)
T PRK06954 160 GRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPA 239 (397)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCc
Confidence 000000000 011000 11110
Q ss_pred --------CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 014349 236 --------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 307 (426)
Q Consensus 236 --------~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 307 (426)
..+...++|||+++||++++.|++++.+++++|.|++.... .|.....+...+++++|+++||+|+|
T Consensus 240 f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~D 314 (397)
T PRK06954 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQ-----APSKFTTAPVGAIRKLFEKNGWRAAE 314 (397)
T ss_pred cCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEeccc-----CcccccchHHHHHHHHHHHcCCCHHH
Confidence 01122369999999999999999999999999998876432 12212234578999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCC
Q 014349 308 VDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 384 (426)
Q Consensus 308 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~ 384 (426)
||++|+| |++++.+++..+..+ .+++++..+..+||+.||||+.+++.++++|+..-
T Consensus 315 id~~ei~----------d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~---------- 374 (397)
T PRK06954 315 VDLFEIN----------EAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARG---------- 374 (397)
T ss_pred CCEEehh----------hHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcC----------
Confidence 9999999 999988886544332 34556666668899999999999999999998621
Q ss_pred CCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 385 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.++.+++...-||...++||++.
T Consensus 375 ------------------g~~~v~~~c~~gg~g~a~~~e~~ 397 (397)
T PRK06954 375 ------------------GKRGVASLCIGGGEATAMGIELI 397 (397)
T ss_pred ------------------CCeEEEEEccccchhhEEEEEeC
Confidence 34567778888899999999874
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=216.97 Aligned_cols=270 Identities=20% Similarity=0.280 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHc-CCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 83 IAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 83 ~~l~~~a~~~Al~dA-Gl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
..|+.+|+++||+|+ |+++.+++ +|++|+.... ...+ ...+..++..+|
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID-----~vv~g~~~~~----------------------~~~g---~~~~~~~a~~lG 77 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDID-----DLMLGCGLPG----------------------GEQG---FNMARVVAVLLG 77 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-----EEEEEccccc----------------------cccc---CCHHHHHHHHcC
Confidence 688999999999997 99999998 8888753210 0000 123457889999
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-------------HH---------------HH
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-------------MA---------------GF 212 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~-------------~~---------------~~ 212 (426)
+.+ |+++|+.+|+|++.|+..|+++|++|.+|++||+|+|.+..... +. .+
T Consensus 78 l~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
T PRK07851 78 YDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAW 157 (406)
T ss_pred CCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccc
Confidence 976 89999999999999999999999999999999999886432100 00 00
Q ss_pred -h------------hhhh----------cc--------------------cc-cCCC------C-------CCCCc-ccc
Q 014349 213 -C------------KSRA----------LT--------------------TK-YNGT------P-------QEASR-PFD 234 (426)
Q Consensus 213 -~------------~~~~----------l~--------------------~~-~~~~------~-------~~~~~-pf~ 234 (426)
. .++. ++ .. +... | +...| +++
T Consensus 158 ~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t 237 (406)
T PRK07851 158 HDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTT 237 (406)
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcC
Confidence 0 0000 00 00 0000 0 00010 011
Q ss_pred -----------c------CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHH
Q 014349 235 -----------C------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRA 297 (426)
Q Consensus 235 -----------~------~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~a 297 (426)
. ..+...++|||+++||++++.|++++.+++++|.|++...+ .|.....+...+++++
T Consensus 238 ~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~-----~~~~~~~~~~~a~~~a 312 (406)
T PRK07851 238 YEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGL-----SPEIMGLGPVEASKQA 312 (406)
T ss_pred HHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccC-----CCCccchhHHHHHHHH
Confidence 0 11233379999999999999999999999999999988653 2233334567899999
Q ss_pred HHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 298 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 298 l~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
|++||++|+|||++|+| |++++..+...+..+ .+++++..+..+||+.|++|+.+++.++++|++.
T Consensus 313 l~~Agi~~~did~~ei~----------d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~- 381 (406)
T PRK07851 313 LARAGMSIDDIDLVEIN----------EAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH- 381 (406)
T ss_pred HHHhCCCHHHCCeehhh----------hHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc-
Confidence 99999999999999999 999888776544332 2455556666889999999999999999999752
Q ss_pred cCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 375 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 375 ~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+.++.|+...+-||...++||+++
T Consensus 382 ---------------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 ---------------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred ---------------------------CCCeEEEEEccccChhhEEEEEec
Confidence 135788889999999999999985
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=220.70 Aligned_cols=282 Identities=16% Similarity=0.192 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++.+++ .+++++.... ....+..+..++..+|
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId-----~vi~~~~~~~-------------------------~~~~~~~a~~va~~lG 72 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQ-----LVVGADTIRN-------------------------GYPGFVAGATFAQALG 72 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC-------------------------ccCCccHHHHHHHHhC
Confidence 478999999999999999887776 6776653211 0011123467899999
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH--H----------HH-----HHh---hhhhcc-
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL--S----------MA-----GFC---KSRALT- 219 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~--~----------~~-----~~~---~~~~l~- 219 (426)
+++ |.+++.++|+|++.||..|+++|++|++|++||+|+|.+.... . +. ++. ..+.+.
T Consensus 73 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~ 152 (399)
T PRK06059 73 WNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLAR 152 (399)
T ss_pred CCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHH
Confidence 987 8999999999999999999999999999999999999754310 0 00 000 000000
Q ss_pred ---ccc------------------CCCCCCCCc-ccc--------------cCCCcceeccceEEEEecchHHHHhc--C
Q 014349 220 ---TKY------------------NGTPQEASR-PFD--------------CGRDGFVIGEGSGVLVLEELEHAKKR--G 261 (426)
Q Consensus 220 ---~~~------------------~~~~~~~~~-pf~--------------~~~~G~~~geGa~alvL~~~~~A~~~--g 261 (426)
.++ ..+|+...| |++ ..-+...++|||+++||.+++.|++. +
T Consensus 153 ~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~ 232 (399)
T PRK06059 153 RRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGS 232 (399)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccc
Confidence 000 011211111 111 01133347999999999999999988 5
Q ss_pred CeeeEEEEeEEEecCCCC--CC-C-----------CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHH
Q 014349 262 AKIYAEVRGYGMSGDAHH--IT-Q-----------PHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEAT 327 (426)
Q Consensus 262 ~~~~a~i~g~~~~~d~~~--~~-~-----------~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~ 327 (426)
.++.++|+|++...+..+ .. . +.+.......+++++|+++|++++|||++|+| |++
T Consensus 233 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~----------d~f 302 (399)
T PRK06059 233 VAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVY----------DLS 302 (399)
T ss_pred cCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeec----------ccC
Confidence 556689999987653221 10 1 11111123578999999999999999999999 666
Q ss_pred HHHHHhhccc-------------------CCCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Q 014349 328 AIRTVFSDHA-------------------TSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 386 (426)
Q Consensus 328 a~~~~~~~~~-------------------~~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~ 386 (426)
++.++...+. .++++|||...+ ..||+.+++|+.+++++++||+...
T Consensus 303 ~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~a------------ 370 (399)
T PRK06059 303 TALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQA------------ 370 (399)
T ss_pred hHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCc------------
Confidence 6655543221 234679998888 4599999999999999999998743
Q ss_pred CCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 387 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
...|....+.+++.+.|.+|..+++||++
T Consensus 371 ---------g~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 371 ---------GGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred ---------CCccCCCccEEEEeccCCcccceEEEecC
Confidence 22333456788888888889999999985
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-25 Score=214.12 Aligned_cols=282 Identities=17% Similarity=0.155 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++.+++ +++++++. . .+.+. ...+..++..+|
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID-----~iv~~~~~-~----------------------~~~~~--~~~~~~va~~LG 73 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDID-----AVVVGKAP-D----------------------FFEGV--MMPELFLADALG 73 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccc-c----------------------ccccc--cCchHHHHHhcC
Confidence 468999999999999999988887 88887521 1 00010 011246889999
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH---------------H-----HHHH------hh
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL---------------S-----MAGF------CK 214 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~---------------~-----~~~~------~~ 214 (426)
+++ |.+.++++|+++..++..|+++|++|.+|.|||+|+|.+.+.. . ...+ ..
T Consensus 74 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 74 ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRR 153 (386)
T ss_pred CCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 976 8889999999999999999999999999999999998653310 0 0000 00
Q ss_pred hhhccc-----------ccCCCCCCCCc-c-cc--------------cCCCcceeccceEEEEecchHHHHhcCCeeeEE
Q 014349 215 SRALTT-----------KYNGTPQEASR-P-FD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAE 267 (426)
Q Consensus 215 ~~~l~~-----------~~~~~~~~~~~-p-f~--------------~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~ 267 (426)
.|.... ....+|....+ | ++ ..-+...++|||+++||.+++.|++.+.++.++
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~ 233 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAW 233 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeE
Confidence 110000 00112221111 1 21 122344489999999999999999887777789
Q ss_pred EEeEEEecCCCCCCC-CCCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHHhhccc-------
Q 014349 268 VRGYGMSGDAHHITQ-PHIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA------- 337 (426)
Q Consensus 268 i~g~~~~~d~~~~~~-~~~~~~~~~~a~~~al~~agl~--~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~------- 337 (426)
|+|++..++...... +.........+++++|+++|++ ++|||++|+| |++++..+...+.
T Consensus 234 I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~----------d~F~~~~~~~~e~lGl~~~G 303 (386)
T PRK08313 234 IHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIY----------VPFSWFEPMWLENLGFAPEG 303 (386)
T ss_pred EEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEec----------cCChHHHHHHHHHcCCCCCC
Confidence 999998876543221 2223355678999999999998 6999999999 5555555542211
Q ss_pred ------------CCCcceeccccccc-chhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCc
Q 014349 338 ------------TSGSLAFSSTKGAI-GHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 404 (426)
Q Consensus 338 ------------~~~~~~v~s~k~~~-Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (426)
.++++|||...+.+ ||+.+++|+.+++++++||+... ...|..+.+
T Consensus 304 ~~~~~~~~G~~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~a---------------------g~rQv~~a~ 362 (386)
T PRK08313 304 EGWKLTEAGETAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGKA---------------------GEHQVDGAR 362 (386)
T ss_pred chHHHHHCCCcCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhcccc---------------------cCCcCCCcc
Confidence 23678999999866 99999999999999999999854 223444567
Q ss_pred EEEEeccc-cccceeeeEeee
Q 014349 405 AALSNSFG-FGGTNASLLFTK 424 (426)
Q Consensus 405 ~~l~~~~g-~gG~~~~~vl~~ 424 (426)
.+++.+.| .+...+.+||++
T Consensus 363 ~~l~~~~Gg~~~~~~~~v~~~ 383 (386)
T PRK08313 363 KALGHAYGGGSQFFSMWVVGS 383 (386)
T ss_pred EEEEeccCCcceEEEEEEEec
Confidence 89998886 445556666654
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=212.32 Aligned_cols=274 Identities=20% Similarity=0.200 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ ++++++.... .....++..+|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID-----~iv~~~~~~~------------------------------~~~~~la~~lG 72 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVD-----GLFTASPDDA------------------------------LWGLSVAEYLG 72 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEecCCCC------------------------------CcHHHHHHHcC
Confidence 468999999999999999988887 8888752100 01135888899
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEe-ecCCCCC---------------h------HHHHHHhhhhhc
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAG-GTESSID---------------A------LSMAGFCKSRAL 218 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~-g~d~~~~---------------~------~~~~~~~~~~~l 218 (426)
+++ +...+.++|+|+..+|..|+++|++|.+|+|||+ |.+.+.. | .....+.....+
T Consensus 73 l~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym 152 (384)
T PRK06158 73 IRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHM 152 (384)
T ss_pred CCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHH
Confidence 976 7778899999999999999999999999999986 6553211 0 000111000000
Q ss_pred cccc-----------------CCCCCCC----------------CcccccCCCcceeccceEEEEecchHHHHhcCCeee
Q 014349 219 TTKY-----------------NGTPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIY 265 (426)
Q Consensus 219 ~~~~-----------------~~~~~~~----------------~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~ 265 (426)
.... ..+|... +.|+. ..+...++|||+++||++++.|++.+.++
T Consensus 153 ~~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~-~~d~~~~~DGAaAvVL~s~e~A~~l~~~~- 230 (384)
T PRK06158 153 HQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLS-VRDCCLVTDGAGAVVMVRADRARDLPRPP- 230 (384)
T ss_pred HHHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCc-hhhcCCccCCeEEEEEecHHHHhhcCCCc-
Confidence 0000 0112111 22222 24555699999999999999999877665
Q ss_pred EEEEeEEEecCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhccc-------
Q 014349 266 AEVRGYGMSGDAHHIT-QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA------- 337 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~-~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~------- 337 (426)
++|.|++..++..... .++........+++++|++||++|+|||++|+| +++++.++...+.
T Consensus 231 v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~Ely----------D~Fs~~~l~~~E~lG~~~~G 300 (384)
T PRK06158 231 VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELY----------DAFTINTILFLEDLGFCAKG 300 (384)
T ss_pred EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEec----------CCchHHHHHHHHHcCCCCCC
Confidence 7889988877654432 233333455789999999999999999999999 5555554442211
Q ss_pred ------------CCCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCC
Q 014349 338 ------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 403 (426)
Q Consensus 338 ------------~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (426)
.++++|+|...+. .||+ +++|+.+++++++||+... ...|-.+.
T Consensus 301 e~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a---------------------g~rQv~~a 358 (384)
T PRK06158 301 EGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA---------------------GERQVAGA 358 (384)
T ss_pred cHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC---------------------CCCcCCCC
Confidence 2357899999984 5999 9999999999999999753 22333456
Q ss_pred cEEEEeccc-cccceeeeEeee
Q 014349 404 SAALSNSFG-FGGTNASLLFTK 424 (426)
Q Consensus 404 ~~~l~~~~g-~gG~~~~~vl~~ 424 (426)
+.+++++.| .+..++.+||++
T Consensus 359 ~~gl~~~~Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 359 EVALAHGNGGVLSSQATAILGT 380 (384)
T ss_pred CEEEEECCCCcccceEEEEEec
Confidence 789988887 555566667765
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=214.15 Aligned_cols=281 Identities=17% Similarity=0.196 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCC--CCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH--
Q 014349 82 FIAYALCAADEALHDAKWLPSD--QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS-- 157 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~--~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~-- 157 (426)
...|+.+++++||+|+|+++.+ ++ +|++|+..+... .. ...++..+.
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID-----~vi~G~~~~~~~----------------------~~--~~~~a~~~~~~ 98 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVD-----KVVVGNFLGELF----------------------SS--QGHLGPAAVGS 98 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcC-----EEEEEecccccc----------------------cc--ccchHHHHHHh
Confidence 4689999999999999999988 87 888886432110 00 011122233
Q ss_pred -----HHcCCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH----------------------
Q 014349 158 -----MKYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---------------------- 209 (426)
Q Consensus 158 -----~~lgl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~---------------------- 209 (426)
..+|+.+ |.++|+++|+||+.||..|+++|++|++|++||+|+|+++....-
T Consensus 99 ~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (438)
T PTZ00455 99 LGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFT 178 (438)
T ss_pred ccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcc
Confidence 4556654 999999999999999999999999999999999999976542100
Q ss_pred -H-HHhh-hhhccccc------------------CCCCCCCC--ccccc------------------------CCCccee
Q 014349 210 -A-GFCK-SRALTTKY------------------NGTPQEAS--RPFDC------------------------GRDGFVI 242 (426)
Q Consensus 210 -~-~~~~-~~~l~~~~------------------~~~~~~~~--~pf~~------------------------~~~G~~~ 242 (426)
. .|.. +..+...+ ..+|.... +|... ..+...+
T Consensus 179 ~~~~~a~~~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~ 258 (438)
T PTZ00455 179 FPCLFAKRMKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQV 258 (438)
T ss_pred hHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCc
Confidence 0 0110 11121111 00122110 11110 1222237
Q ss_pred ccceEEEEecchHHHHhcCCee----eEEEEeEEEecCCCCCCCC---CCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 014349 243 GEGSGVLVLEELEHAKKRGAKI----YAEVRGYGMSGDAHHITQP---HIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 315 (426)
Q Consensus 243 geGa~alvL~~~~~A~~~g~~~----~a~i~g~~~~~d~~~~~~~---~~~~~~~~~a~~~al~~agl~~~dId~v~~hg 315 (426)
+|||+++||.+++.|++.+.+| .++|+|++...+.... .| ..... ...+++++|+++|++|+|||++|+|
T Consensus 259 sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~-~~~~~~~~~~-~~~A~~~a~~~AGl~~~DiD~~Ei~- 335 (438)
T PTZ00455 259 SDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYE-DPPDATRMFT-SRAAAQKALSMAGVKPSDLQVAEVH- 335 (438)
T ss_pred cccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCccc-CccccccchH-HHHHHHHHHHHcCCCHHHCcEeeec-
Confidence 9999999999999999988776 6999999988653221 22 22222 3689999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHhhcccC-------------------CCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 316 TSTPLGDTVEATAIRTVFSDHAT-------------------SGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 316 tgt~~~D~~E~~a~~~~~~~~~~-------------------~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
|++++..+...+.. ++++|||...+ .+||+.+|+|+..++++++||+...
T Consensus 336 ---------daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~a 406 (438)
T PTZ00455 336 ---------DCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQC 406 (438)
T ss_pred ---------ccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhcc
Confidence 88888777644332 23478888888 5699999999999999999998642
Q ss_pred cCCCCCCCCCCCCCCCCCCccccCCCCC-CcEEEEeccc-cccceeeeEeee
Q 014349 375 APLTLNLAKPDPIFNDNFMPLTASKDMP-ISAALSNSFG-FGGTNASLLFTK 424 (426)
Q Consensus 375 ~pp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g-~gG~~~~~vl~~ 424 (426)
...|-.. .+.+++.+.| +++.+++.||+.
T Consensus 407 ---------------------g~~Qv~~~~~~gl~~~~Gg~~~~~~~~vl~~ 437 (438)
T PTZ00455 407 ---------------------GEYQMKNIPALGATLNMGGDDKTAVSTVLQN 437 (438)
T ss_pred ---------------------ccCCCCCcccEEEEeccCCCcceEEEEEEec
Confidence 1222233 4788888887 777777777764
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.7e-25 Score=212.39 Aligned_cols=280 Identities=17% Similarity=0.149 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|+|+++.+++ ++++++.... +.+ ....+..++..+|
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID-----~~i~~~~~~~-----------------------~~~--~~~~a~~l~~~lG 78 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDID-----CVVIGSAPDA-----------------------FDG--VHMKGEYLSHGSG 78 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCCc-----------------------ccc--cccHHHHHHHHcC
Confidence 478999999999999999998887 8888752110 000 1234456888898
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCCh----HHH--------------------HHHhhhh
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA----LSM--------------------AGFCKSR 216 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~----~~~--------------------~~~~~~~ 216 (426)
+.+ |.+.|+++|+|+..+|..|+++|++|.+|+|||+|+|.+... ... ..+...+
T Consensus 79 ~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~r 158 (392)
T PRK06065 79 GIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHR 158 (392)
T ss_pred CCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHH
Confidence 874 899999999999999999999999999999999999874221 000 0000000
Q ss_pred hccccc-----------------CCCCCCCC-cccc--------------cCCCcceeccceEEEEecchHHHHhcCCee
Q 014349 217 ALTTKY-----------------NGTPQEAS-RPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGAKI 264 (426)
Q Consensus 217 ~l~~~~-----------------~~~~~~~~-~pf~--------------~~~~G~~~geGa~alvL~~~~~A~~~g~~~ 264 (426)
.+.... ..+|.... +|.+ ..-+...++|||+|+||.+++.|++.+.++
T Consensus 159 ym~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~ 238 (392)
T PRK06065 159 YMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP 238 (392)
T ss_pred HHHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC
Confidence 000000 00111110 1111 012233489999999999999999887666
Q ss_pred eEEEEeEEEecCCCCCCCC-CCChHHHHHHHHHHHHHcCCCC--CCccEEEecCCCCCCCCHHHHHHHHHHhhccc----
Q 014349 265 YAEVRGYGMSGDAHHITQP-HIDGKGAILAMTRALKQSGLQS--HQVDYVNAHATSTPLGDTVEATAIRTVFSDHA---- 337 (426)
Q Consensus 265 ~a~i~g~~~~~d~~~~~~~-~~~~~~~~~a~~~al~~agl~~--~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~---- 337 (426)
.+|.|++...+....... .........+++++|+++|+++ +|||++|+| |++++..+...+.
T Consensus 239 -v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~----------D~Fs~~~l~~~E~lG~~ 307 (392)
T PRK06065 239 -VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPY----------DPFDYKELHHLEGLQLA 307 (392)
T ss_pred -EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEec----------CCChHHHHHHHHHcCCC
Confidence 569999887654332111 1122344679999999999985 999999999 5555444432111
Q ss_pred ---------------CCCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 338 ---------------TSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 338 ---------------~~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
.++++|+|...+ ..||+.+|+|+.+++++++||+... ...|.
T Consensus 308 ~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQv 366 (392)
T PRK06065 308 KRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTA---------------------GKMQV 366 (392)
T ss_pred CCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccc---------------------cCCcC
Confidence 235789998888 4699999999999999999998754 22333
Q ss_pred CCC-cEEEEeccc-cccceeeeEee
Q 014349 401 MPI-SAALSNSFG-FGGTNASLLFT 423 (426)
Q Consensus 401 ~~~-~~~l~~~~g-~gG~~~~~vl~ 423 (426)
.+. +.+++.++| .+..++.+||+
T Consensus 367 ~~a~~~~l~~~~Gg~~~~~~~~il~ 391 (392)
T PRK06065 367 KKPVHTGVAQAWGDLMQAGTVIVLR 391 (392)
T ss_pred CCccceeEEeccccccceeEEEEec
Confidence 345 788998887 55566666664
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-25 Score=213.63 Aligned_cols=273 Identities=23% Similarity=0.305 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|+|+++++++ .+++|+..... .....+..++..+|
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id-----~vi~g~~~~~~--------------------------~~~~~a~~va~~lG 64 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID-----AVVVGNAAGGR--------------------------FQSFPGALIAEYLG 64 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEecccccc--------------------------cccchHHHHHHHcC
Confidence 468999999999999999888777 88888743210 01235577999999
Q ss_pred CC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH---H------HH------h------hhhhcc
Q 014349 162 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---A------GF------C------KSRALT 219 (426)
Q Consensus 162 l~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~---~------~~------~------~~~~l~ 219 (426)
+. .|.++++.+|+|++.+|..|+++|++|++|++||+|+|.+...... . .+ . ..+.+.
T Consensus 65 l~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a 144 (375)
T cd00829 65 LLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAA 144 (375)
T ss_pred CCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHH
Confidence 95 4899999999999999999999999999999999999976543110 0 00 0 000000
Q ss_pred ----ccc------------------CCCCCCC----------------CcccccCCCcceeccceEEEEecchHHHHhcC
Q 014349 220 ----TKY------------------NGTPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRG 261 (426)
Q Consensus 220 ----~~~------------------~~~~~~~----------------~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g 261 (426)
.++ ..+|... +.|+. ..+...++|||+++||++++.|+++
T Consensus 145 ~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~- 222 (375)
T cd00829 145 RRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERAREL- 222 (375)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhc-
Confidence 000 0011110 11221 2344468999999999999999988
Q ss_pred CeeeEEEEeEEEecCCCCCCCCCC--ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhccc--
Q 014349 262 AKIYAEVRGYGMSGDAHHITQPHI--DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA-- 337 (426)
Q Consensus 262 ~~~~a~i~g~~~~~d~~~~~~~~~--~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~-- 337 (426)
.+++++|.|++...+..+...+.. ...+...+++++|+++|++++|||++|+| |++++..+...+.
T Consensus 223 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~----------d~F~~~~l~~~e~lG 292 (375)
T cd00829 223 TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELY----------DCFTIAELLALEDLG 292 (375)
T ss_pred CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEec----------CcChHHHHHHHHHcC
Confidence 667899999999887765544332 45667899999999999999999999999 5555444432221
Q ss_pred -----------------CCCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccC
Q 014349 338 -----------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 398 (426)
Q Consensus 338 -----------------~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 398 (426)
.++++|||...+. +||+.+++|+..++++++||+... ...
T Consensus 293 l~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~a---------------------g~~ 351 (375)
T cd00829 293 FCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEA---------------------GAR 351 (375)
T ss_pred CCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCc---------------------ccc
Confidence 1245689988884 699999999999999999999753 222
Q ss_pred CCCCCcEEEEecccccccee
Q 014349 399 KDMPISAALSNSFGFGGTNA 418 (426)
Q Consensus 399 ~~~~~~~~l~~~~g~gG~~~ 418 (426)
|..+.+++++.+.|-.+.+.
T Consensus 352 qv~~~~~~l~~~~gg~~~~~ 371 (375)
T cd00829 352 QVPGARVGLAHNIGGTGSAA 371 (375)
T ss_pred cCCCccEEEEecCCCccceE
Confidence 33356788888776444433
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-25 Score=217.02 Aligned_cols=272 Identities=20% Similarity=0.268 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+++++||+|+|+++++++ .|++|+....... + . . ......+...++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID-----~vi~g~~~~~~~~-----------------~----~-~-~~~~~~l~a~~~ 83 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEID-----DIITGCALQVGEN-----------------W----L-Y-GGRHPIFLARLP 83 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----eeEEEeecCCCcc-----------------c----c-c-HHHHHHHHcCCC
Confidence 468999999999999999999887 8888875421100 0 0 0 001112333334
Q ss_pred CCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH-----------HHH-H-----Hh-----hhhhcc
Q 014349 162 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL-----------SMA-G-----FC-----KSRALT 219 (426)
Q Consensus 162 l~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~-----------~~~-~-----~~-----~~~~l~ 219 (426)
.+-|+++|+++|+|++.|+..|+++|++|.+|++||+|+|++.... ... . +. .++..+
T Consensus 84 ~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 163 (394)
T PRK06445 84 YNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTA 163 (394)
T ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHH
Confidence 4458999999999999999999999999999999999999654211 000 0 00 000000
Q ss_pred ----ccc-------------------C------------------------CCCCCCCc------------c-cc-----
Q 014349 220 ----TKY-------------------N------------------------GTPQEASR------------P-FD----- 234 (426)
Q Consensus 220 ----~~~-------------------~------------------------~~~~~~~~------------p-f~----- 234 (426)
.++ . .+|+...| | |+
T Consensus 164 ~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~l 243 (394)
T PRK06445 164 EKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVI 243 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcE
Confidence 000 0 02221111 1 11
Q ss_pred cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 014349 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 314 (426)
Q Consensus 235 ~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~h 314 (426)
...+...++|||+++||++++.|++++.+++++|.|++...+ .|.....+...+++++|+++|++|+|||++|+|
T Consensus 244 t~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~ 318 (394)
T PRK06445 244 TAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGV-----PPAIMGKGPVPASKKALEKAGLSVKDIDLWEIN 318 (394)
T ss_pred ecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCchhcchHHHHHHHHHHHcCCCHHHcCEEEec
Confidence 011233479999999999999999999999999999998764 233334456889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhcccCC-Ccceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCC
Q 014349 315 ATSTPLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 391 (426)
Q Consensus 315 gtgt~~~D~~E~~a~~~~~~~~~~~-~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~ 391 (426)
|++++.++...+..+ .+-|+|...+ .+||+.||+|+.+++.++++|+.
T Consensus 319 ----------d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~------------------- 369 (394)
T PRK06445 319 ----------EAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI------------------- 369 (394)
T ss_pred ----------ccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh-------------------
Confidence 777777776554432 1235666666 67999999999999999999971
Q ss_pred CCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 392 FMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 392 ~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
...|+++++..+-||...++||++
T Consensus 370 ---------~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 ---------KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred ---------cCCCEEEEEEcccCChhhEEEEEc
Confidence 124688999999999999999986
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=217.22 Aligned_cols=270 Identities=21% Similarity=0.269 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+++++||+|+|+++++++ +|++|+..... .....+..++..+|
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID-----~vi~g~~~~~~--------------------------~~~~~a~~~~~~~G 74 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQ-----EVIMGNVIQAG--------------------------VGQNPAGQAAYHAG 74 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------ccCcHHHHHHHHCC
Confidence 467999999999999999999998 89998642110 00112456788899
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH------------H-------H-HHhhh----
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS------------M-------A-GFCKS---- 215 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~------------~-------~-~~~~~---- 215 (426)
+.. |.++++.+|+|++.|+..|+++|++|++|++||+|+|++..... . . .+...
T Consensus 75 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (388)
T PRK06366 75 LPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLID 154 (388)
T ss_pred CCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccc
Confidence 964 99999999999999999999999999999999999998652110 0 0 00000
Q ss_pred -------hhccccc----C------------------CCCCC-CC----------------ccc------------cc--
Q 014349 216 -------RALTTKY----N------------------GTPQE-AS----------------RPF------------DC-- 235 (426)
Q Consensus 216 -------~~l~~~~----~------------------~~~~~-~~----------------~pf------------~~-- 235 (426)
+..++++ + ..|.. .. +|. +.
T Consensus 155 ~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g 234 (388)
T PRK06366 155 AFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNG 234 (388)
T ss_pred cccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCC
Confidence 1101101 0 01111 11 111 10
Q ss_pred ---CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 014349 236 ---GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 312 (426)
Q Consensus 236 ---~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~ 312 (426)
..+...++|||+++||.+++.|++.+.++.++|+|++..... |.........+++++|+++|++|+|||++|
T Consensus 235 ~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~-----~~~~~~~~~~A~~~al~~Agl~~~DiDv~E 309 (388)
T PRK06366 235 ILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLD-----PLDFVEAPIPATRKLLEKQNKSIDYYDLVE 309 (388)
T ss_pred CEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecC-----HHHhcccHHHHHHHHHHHcCCCHHHcceee
Confidence 112223799999999999999999998888899999887542 111122236899999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhhcccCC--Ccceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC
Q 014349 313 AHATSTPLGDTVEATAIRTVFSDHATS--GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 388 (426)
Q Consensus 313 ~hgtgt~~~D~~E~~a~~~~~~~~~~~--~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~ 388 (426)
+| |++++..+...+..+ +. +||...+ .+|||.||||+..++.++.||+..
T Consensus 310 i~----------daFa~~~l~~le~lgl~g~-~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~--------------- 363 (388)
T PRK06366 310 HN----------EAFSIASIIVRDQLKIDNE-RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR--------------- 363 (388)
T ss_pred cc----------chhHHHHHHHHHHhCCCCC-ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc---------------
Confidence 99 999999998766533 45 7888777 459999999999999999999752
Q ss_pred CCCCCccccCCCCCCcEEEEeccccccceeeeEeeecC
Q 014349 389 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
..++.++....-||...++||++.+
T Consensus 364 -------------~~~~g~~~~c~~gg~g~a~~~e~~~ 388 (388)
T PRK06366 364 -------------HMKTGLATLCHGGGGAHTLTLEMVE 388 (388)
T ss_pred -------------CCCeEEEEEecccChhhEEEEEecC
Confidence 2457888888899999999999864
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-26 Score=186.83 Aligned_cols=118 Identities=39% Similarity=0.646 Sum_probs=99.0
Q ss_pred eEEEEeEEEecCC-CCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcce
Q 014349 265 YAEVRGYGMSGDA-HHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA 343 (426)
Q Consensus 265 ~a~i~g~~~~~d~-~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~ 343 (426)
|++|+|++.++|+ .+...+.+++.++.++|+++|+++|++|+|||||++||+||+.+|..|..++.++|+......+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 6899999999998 677777788899999999999999999999999999999999999999999999999864345799
Q ss_pred ecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCC
Q 014349 344 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 382 (426)
Q Consensus 344 v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~ 382 (426)
|+++|+++||+++|+|++++++++++|+++++||++|++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999985
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=210.71 Aligned_cols=270 Identities=17% Similarity=0.175 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCC
Q 014349 83 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 162 (426)
Q Consensus 83 ~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl 162 (426)
..|+.++++++|+++|+++.+++ .|++|+.... +.-...++..++...|+
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id-----~v~~G~~~~~-------------------------~~q~~~~ar~~~l~~Gl 76 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE-----QVIGGCVTQA-------------------------GEQSNNITRTAWLHAGL 76 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccc-------------------------ccccchHHHHHHHhCCC
Confidence 68899999999999999998887 8899874210 00001234456667888
Q ss_pred C-C-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-HH-------------HH--hhhh----hccc
Q 014349 163 Q-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-MA-------------GF--CKSR----ALTT 220 (426)
Q Consensus 163 ~-g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~-~~-------------~~--~~~~----~l~~ 220 (426)
. + |.++|+++|+||+.|+..|++.|++|++|++||+|+|+++.... .. .+ ..++ .+..
T Consensus 77 ~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~ 156 (387)
T PRK07850 77 PYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAK 156 (387)
T ss_pred CCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHH
Confidence 6 3 89999999999999999999999999999999999999765320 00 00 0000 0000
Q ss_pred ccCC-----------------------------------------CCCCC---------------------Cccccc---
Q 014349 221 KYNG-----------------------------------------TPQEA---------------------SRPFDC--- 235 (426)
Q Consensus 221 ~~~~-----------------------------------------~~~~~---------------------~~pf~~--- 235 (426)
+++- +|... ...|..
T Consensus 157 ~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~ 236 (387)
T PRK07850 157 RRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIH 236 (387)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCc
Confidence 0000 00011 112210
Q ss_pred C-CCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 014349 236 G-RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 314 (426)
Q Consensus 236 ~-~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~h 314 (426)
. .+...++|||+++||.+++.|++.+.++.++|.|++.... .|.....+...+++++|+++|++|+|||++|+|
T Consensus 237 t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~did~~ei~ 311 (387)
T PRK07850 237 TAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGA-----EPYYHLDGPVQATAKVLEKAGMKIGDIDLVEIN 311 (387)
T ss_pred cchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecc-----CchhhcchHHHHHHHHHHHcCCCHHHcCeeeec
Confidence 1 1333488999999999999999999888899999987542 122223455789999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhcccCCC-cceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCC
Q 014349 315 ATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 391 (426)
Q Consensus 315 gtgt~~~D~~E~~a~~~~~~~~~~~~-~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~ 391 (426)
|++++..+...+..+. .-|+|...+ .+||+.+|+|+..++++++||+.+
T Consensus 312 ----------d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~------------------ 363 (387)
T PRK07850 312 ----------EAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERT------------------ 363 (387)
T ss_pred ----------ccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc------------------
Confidence 8888887765443221 126666666 679999999999999999999752
Q ss_pred CCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 392 FMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 392 ~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.++...+-||...+++|+++
T Consensus 364 ----------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 364 ----------DKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred ----------CCCeEEEEEccccCceeEEEEEeC
Confidence 245788888888999999999874
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=213.39 Aligned_cols=279 Identities=18% Similarity=0.184 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+++++||+|+|+++.+++ ++++|+...... .. .....++..+|
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID-----~v~vg~~~~~~~----------------------~~----~~~~~~a~~lG 75 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDID-----AAWFGTHYDEIG----------------------SG----KSGTPLSRALR 75 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccccc----------------------cc----chhHHHHHHcC
Confidence 468999999999999999999988 898886321100 00 01124677899
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH--HH------HHh----------hhhhccc--
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--MA------GFC----------KSRALTT-- 220 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~--~~------~~~----------~~~~l~~-- 220 (426)
+.+ |.++|+.+|+|++.||..|+++|++|++|++||+|+|.+..... .. .+. ....++.
T Consensus 76 l~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~ 155 (398)
T PRK06157 76 LPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAY 155 (398)
T ss_pred CCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHH
Confidence 976 88899999999999999999999999999999999997543100 00 000 0000000
Q ss_pred --cc----------------------CCCCCCC------------Ccccc---cCCCcceeccceEEEEecchHHHHhcC
Q 014349 221 --KY----------------------NGTPQEA------------SRPFD---CGRDGFVIGEGSGVLVLEELEHAKKRG 261 (426)
Q Consensus 221 --~~----------------------~~~~~~~------------~~pf~---~~~~G~~~geGa~alvL~~~~~A~~~g 261 (426)
++ ..+|+.. .+|.. ..-+...++|||+++||.+++.|++.+
T Consensus 156 ~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~ 235 (398)
T PRK06157 156 AAKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALG 235 (398)
T ss_pred HHHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhC
Confidence 00 0011111 11110 111333479999999999999999988
Q ss_pred CeeeEEEEeEEEecCCCCC-----CCCCCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHHhh
Q 014349 262 AKIYAEVRGYGMSGDAHHI-----TQPHIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAIRTVFS 334 (426)
Q Consensus 262 ~~~~a~i~g~~~~~d~~~~-----~~~~~~~~~~~~a~~~al~~agl~--~~dId~v~~hgtgt~~~D~~E~~a~~~~~~ 334 (426)
..+.++|.|++...+.... ..+... .....+.+++|+++||+ ++|||++|+| |++++..+..
T Consensus 236 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~~~AGl~~~~~Did~~Ei~----------D~Fs~~~l~~ 304 (398)
T PRK06157 236 KKDPVYVKALQLAVSNGWELQYNGWDGSYF-PTTRIAARKAYREAGITDPREELSMAEVH----------DCFSITELVT 304 (398)
T ss_pred CCCCeEEEEEEEeccccccccccccccccc-HHHHHHHHHHHHHcCCCCchhcCCEEEEe----------cCChHHHHHH
Confidence 6566899999887543211 112111 22457899999999998 7999999999 6666666553
Q ss_pred ccc-------------------CCCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCC
Q 014349 335 DHA-------------------TSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFM 393 (426)
Q Consensus 335 ~~~-------------------~~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~ 393 (426)
.+. .++++|+|...+ .+||+.+|+|+..++++++||+...
T Consensus 305 ~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a------------------- 365 (398)
T PRK06157 305 MEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRA------------------- 365 (398)
T ss_pred HHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhcccc-------------------
Confidence 222 135679999998 5599999999999999999998754
Q ss_pred ccccCCCCCCcEEEEeccc-c--ccceeeeEee
Q 014349 394 PLTASKDMPISAALSNSFG-F--GGTNASLLFT 423 (426)
Q Consensus 394 ~~~~~~~~~~~~~l~~~~g-~--gG~~~~~vl~ 423 (426)
...|..+.+.+++++.| . |..++..||.
T Consensus 366 --g~rQv~~a~~~l~~~~gg~~~~~~~~~~~~~ 396 (398)
T PRK06157 366 --GERQLKNPRLALTHNLGGAPGQNVCSVSIVG 396 (398)
T ss_pred --cCccCCCccEEEEeccCCcCCCCEEEEEEEe
Confidence 23344457889998877 3 3344444444
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=210.71 Aligned_cols=271 Identities=24% Similarity=0.312 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+++++||+|||+++.+++ +|++|+..... .+ ...+..++..+|
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID-----~vv~g~~~~~~-----------------------~~---~~~~~~~~~~~G 73 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQ-----EVFFGNVLSAN-----------------------LG---QAPARQAALGAG 73 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCcCC-----------------------cC---CcHHHHHHHhcC
Confidence 368899999999999999998888 88887632110 00 112345778889
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH---------------HH-HH--h--------
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS---------------MA-GF--C-------- 213 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~---------------~~-~~--~-------- 213 (426)
+. -|..+|+.+|+|++.||..|+++|++|++|++||+|+|++..... .. .+ .
T Consensus 74 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (394)
T PLN02644 74 LPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYND 153 (394)
T ss_pred CCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCC
Confidence 85 378899999999999999999999999999999999887642110 00 00 0
Q ss_pred -hhhh----ccccc--------------------CCCCCC-C------------Ccc-----------------c-----
Q 014349 214 -KSRA----LTTKY--------------------NGTPQE-A------------SRP-----------------F----- 233 (426)
Q Consensus 214 -~~~~----l~~~~--------------------~~~~~~-~------------~~p-----------------f----- 233 (426)
.++. +..++ +..|.. . ..| +
T Consensus 154 ~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p 233 (394)
T PLN02644 154 FGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRP 233 (394)
T ss_pred CcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCC
Confidence 0000 00000 000000 0 000 1
Q ss_pred --c------cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 014349 234 --D------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 305 (426)
Q Consensus 234 --~------~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~ 305 (426)
. ...+...++||++++||++++.|++++.+++++|+|++...+.. .........+++++|+++|++|
T Consensus 234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~ 308 (394)
T PLN02644 234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAP-----ELFTTAPALAIPKALKHAGLEA 308 (394)
T ss_pred cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCC-----cccchhHHHHHHHHHHHcCCCH
Confidence 0 00123446999999999999999999999999999999876521 1112233579999999999999
Q ss_pred CCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCC
Q 014349 306 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 382 (426)
Q Consensus 306 ~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~ 382 (426)
+|||++|+| |++++..+...+..+ .+++++..+..+||+.+|+|+.++++++++|+..
T Consensus 309 ~Did~~Ei~----------d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~--------- 369 (394)
T PLN02644 309 SQVDYYEIN----------EAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK--------- 369 (394)
T ss_pred HHCCEEEeC----------cHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc---------
Confidence 999999999 777776665443322 2344444445789999999999999999999862
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeecC
Q 014349 383 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
..++.+...++-||...++||++.+
T Consensus 370 -------------------~~~~g~~~~~~~gg~g~a~~~e~~~ 394 (394)
T PLN02644 370 -------------------NGKYGVAGICNGGGGASAIVVELMQ 394 (394)
T ss_pred -------------------CCCeEEEEEeccCCceeEEEEEecC
Confidence 1346777778888999999999864
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-25 Score=213.59 Aligned_cols=270 Identities=21% Similarity=0.250 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++.+++ .|++|+..... .+ ..++..++..+|
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID-----~vi~g~~~~~~-----------------------~~---~~~~~~~~~~~G 74 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVE-----EVIMGTVLQGG-----------------------QG---QIPSRQAARAAG 74 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCC-----------------------CC---CCHHHHHHHHcC
Confidence 368999999999999999998887 89998753210 00 122335678889
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH-------------HH---------h----
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA-------------GF---------C---- 213 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~-------------~~---------~---- 213 (426)
+. -|+++|+++|+|++.||..|+++|++|++|++||+|+|.++...... .+ .
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK08235 75 IPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSG 154 (393)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 84 48999999999999999999999999999999999999876532100 00 0
Q ss_pred -hhhhc----cccc-------------------C-------------------------CCCCCCCcc------------
Q 014349 214 -KSRAL----TTKY-------------------N-------------------------GTPQEASRP------------ 232 (426)
Q Consensus 214 -~~~~l----~~~~-------------------~-------------------------~~~~~~~~p------------ 232 (426)
.++.. ..++ . .+|+...|+
T Consensus 155 ~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 155 VHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 00000 0000 0 012222221
Q ss_pred -ccc-----CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 014349 233 -FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306 (426)
Q Consensus 233 -f~~-----~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 306 (426)
|+. ..+...++|||+++||++++.|++++.+++++|.|++...... .........+++++|+++|++|+
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEA-----KDFPRTPGYAINALLEKTGKTVE 309 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCh-----hhhcchHHHHHHHHHHHhCCCHH
Confidence 110 1122237999999999999999999999999999987654311 11122346899999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Q 014349 307 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383 (426)
Q Consensus 307 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~ 383 (426)
|||++|+| |++++..+...+..+ .+++++..+..+||+.+|+|+..++.++++|+.+.
T Consensus 310 did~~e~~----------d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~--------- 370 (393)
T PRK08235 310 DIDLFEIN----------EAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRG--------- 370 (393)
T ss_pred HCCeehhc----------chhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcC---------
Confidence 99999999 887766665443322 24455555558899999999999999999998632
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.++.+...+.-||...++||++.
T Consensus 371 -------------------~~~g~~~~c~~gG~g~a~~~e~~ 393 (393)
T PRK08235 371 -------------------GGIGIAAICSGGGQGDAVLIEVH 393 (393)
T ss_pred -------------------CCeEEEEEcccccceEEEEEEeC
Confidence 23577777778889999999863
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=209.52 Aligned_cols=270 Identities=21% Similarity=0.245 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 83 IAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 83 ~~l~~~a~~~Al~d-AGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
..|+.+++++||++ +|+++.+++ .+++|+..... .. ...++..++...|
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id-----~vi~g~~~~~~-----------------------~~--g~~~ar~~~~~~G 77 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEID-----DIIWGCVQQTL-----------------------EQ--GFNIARNAALLAG 77 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhC-----eEEEEeccccc-----------------------cc--cccHHHHHHHHcC
Confidence 67889999999995 899988887 88998632100 00 0123445777888
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH------HHH--------hhhhhcc----cc
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM------AGF--------CKSRALT----TK 221 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~------~~~--------~~~~~l~----~~ 221 (426)
+.. |+++|+++|+||+.|+..|+++|++|++|++||+|+|+++..... ..+ ..++..+ .+
T Consensus 78 l~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 157 (387)
T PRK08947 78 IPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKM 157 (387)
T ss_pred CCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHH
Confidence 863 779999999999999999999999999999999999987642100 000 0000000 00
Q ss_pred c-------------------C--------C-----------------CCCCCCc------------c-ccc------CCC
Q 014349 222 Y-------------------N--------G-----------------TPQEASR------------P-FDC------GRD 238 (426)
Q Consensus 222 ~-------------------~--------~-----------------~~~~~~~------------p-f~~------~~~ 238 (426)
| . . +|+...| | |+. ..+
T Consensus 158 ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~ 237 (387)
T PRK08947 158 HGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGT 237 (387)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccc
Confidence 0 0 0 1222211 1 111 122
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
...++|||+++||++++.|++.+.+++++|.|++......+ ........+++++|+++|++|+|||++|+|
T Consensus 238 ~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~~El~---- 308 (387)
T PRK08947 238 SSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPS-----IMGYGPVPATQKALKRAGLSISDIDVFELN---- 308 (387)
T ss_pred cCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcc-----cccccHHHHHHHHHHHcCCCHHHCCEEEec----
Confidence 33479999999999999999999899999999988743211 112234688999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCC----cceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCC
Q 014349 319 PLGDTVEATAIRTVFSDHATSG----SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNF 392 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~----~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~ 392 (426)
|++++..+...+..+. ..|++...+ .+||+.||+|+..++.++++|+.
T Consensus 309 ------d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~-------------------- 362 (387)
T PRK08947 309 ------EAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER-------------------- 362 (387)
T ss_pred ------ccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh--------------------
Confidence 8888888876554331 146676666 56999999999999999999975
Q ss_pred CccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 393 MPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 393 ~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+.+++++++++-+|..+++||+++
T Consensus 363 --------~~~~~gl~~~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 363 --------KDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_pred --------cCCCEEEEEEeecccceeEEEEEeC
Confidence 1246888998887788888998863
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=209.08 Aligned_cols=271 Identities=21% Similarity=0.252 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 82 FIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 82 ~~~l~~~a~~~Al~d-AGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...|+.+++++||++ +|+++.+++ .|++|+..... ..+ ..++..+....
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id-----~v~~G~~~~~~----------------------~~g---~~~ar~~~~~~ 74 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVE-----DIYWGCVQQTL----------------------EQG---FNIARNAALLA 74 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcC-----EEEEecccccc----------------------ccc---chHHHHHHHHC
Confidence 368999999999995 699998888 89998742100 000 12444555566
Q ss_pred CCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH------HHHh--------hhhh----ccc
Q 014349 161 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM------AGFC--------KSRA----LTT 220 (426)
Q Consensus 161 gl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~------~~~~--------~~~~----l~~ 220 (426)
|+.. |+++|+.+|+||+.|+..|+++|++|++|++||+|+|++...... ..+. .++. +..
T Consensus 75 g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 154 (385)
T TIGR02445 75 QIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGK 154 (385)
T ss_pred CCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHH
Confidence 7643 779999999999999999999999999999999999987532110 0000 0000 000
Q ss_pred cc-------------------C--------C-----------------CCCCCCcc-------------ccc------CC
Q 014349 221 KY-------------------N--------G-----------------TPQEASRP-------------FDC------GR 237 (426)
Q Consensus 221 ~~-------------------~--------~-----------------~~~~~~~p-------------f~~------~~ 237 (426)
+| . + +|+...|+ |+. ..
T Consensus 155 ~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~ 234 (385)
T TIGR02445 155 MHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAG 234 (385)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecc
Confidence 00 0 0 13322221 111 12
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 317 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtg 317 (426)
+...++||++++||++++.|++++.+++++|.|++.... .|.........+++++|+++|++|+|||++|+|
T Consensus 235 ~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~--- 306 (385)
T TIGR02445 235 TSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGC-----DPSIMGYGPVPATQKALKRAGLSISDIDVFELN--- 306 (385)
T ss_pred cCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCC-----CCcccchhHHHHHHHHHHHcCCCHHHcCEEEEc---
Confidence 333479999999999999999999999999999988742 222222345789999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcccCCC----cceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCC
Q 014349 318 TPLGDTVEATAIRTVFSDHATSG----SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 391 (426)
Q Consensus 318 t~~~D~~E~~a~~~~~~~~~~~~----~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~ 391 (426)
|++++..+...+..+- ..|+|...+ .+||+.||||+..++.+++.|++
T Consensus 307 -------daFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~------------------- 360 (385)
T TIGR02445 307 -------EAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ------------------- 360 (385)
T ss_pred -------cccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh-------------------
Confidence 8888888876554331 257777777 56999999999988888855433
Q ss_pred CCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 392 FMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 392 ~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
...+++++.+.+-+|...++||+++
T Consensus 361 ---------~~~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 361 ---------KDATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred ---------cCCCeEEEEEecccChhheEEEEeC
Confidence 1245788999988999999999874
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-24 Score=210.61 Aligned_cols=283 Identities=17% Similarity=0.177 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ +|++++..+.... . ...+.... . ....+
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID-----~vi~g~~~~~~~~----------------~----~~~~~~~~-~--~~~~~ 77 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIE-----VVHVGNFFGELFA----------------G----QGHLGAMP-A--TVHPA 77 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccccc----------------c----ccccchHH-H--HHhhc
Confidence 578999999999999999999998 8988874322100 0 00000111 1 11224
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH---HH------hh------------hhhcc
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---GF------CK------------SRALT 219 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~---~~------~~------------~~~l~ 219 (426)
+.| |++++.++|+|++.||..|+.+|++|++|+|||+|+|.+....... .+ .. .+...
T Consensus 78 ~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a 157 (403)
T PRK06289 78 LWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVA 157 (403)
T ss_pred CCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHH
Confidence 434 8999999999999999999999999999999999999754321100 00 00 00000
Q ss_pred ccc----------------------CCCCCCCCc------ccc--------------cCCCcceeccceEEEEecchHHH
Q 014349 220 TKY----------------------NGTPQEASR------PFD--------------CGRDGFVIGEGSGVLVLEELEHA 257 (426)
Q Consensus 220 ~~~----------------------~~~~~~~~~------pf~--------------~~~~G~~~geGa~alvL~~~~~A 257 (426)
+++ ..+|....+ |.. ..-+...++|||+++||.+++.|
T Consensus 158 ~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a 237 (403)
T PRK06289 158 DEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYL 237 (403)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHH
Confidence 000 011211111 100 01122237899999999999999
Q ss_pred HhcCC-eeeEEEEeEEEecCCCCCCC------CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH
Q 014349 258 KKRGA-KIYAEVRGYGMSGDAHHITQ------PHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI 329 (426)
Q Consensus 258 ~~~g~-~~~a~i~g~~~~~d~~~~~~------~~~-~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~ 329 (426)
++.+. ++.++|+|++..++...... .++ .......+.+++|++||++++|||++|+| |++++
T Consensus 238 ~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~----------D~fa~ 307 (403)
T PRK06289 238 RDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVH----------DCFTP 307 (403)
T ss_pred HHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeee----------ccchH
Confidence 98775 56689999998755432211 011 12335679999999999999999999999 66666
Q ss_pred HHHhhcccC-------------------CCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC
Q 014349 330 RTVFSDHAT-------------------SGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 388 (426)
Q Consensus 330 ~~~~~~~~~-------------------~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~ 388 (426)
..+...+.. ++++|+|...+. .||+.+|+|+.+++++++||+...
T Consensus 308 ~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a-------------- 373 (403)
T PRK06289 308 SEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTA-------------- 373 (403)
T ss_pred HHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhccc--------------
Confidence 665432221 367899999984 599999999999999999999743
Q ss_pred CCCCCccccCCCCCCcEEEEeccc-cccceeeeEee
Q 014349 389 NDNFMPLTASKDMPISAALSNSFG-FGGTNASLLFT 423 (426)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~l~~~~g-~gG~~~~~vl~ 423 (426)
...|....+.+++.+.| .+|++.++||+
T Consensus 374 -------g~~Qv~~~~~~l~~~~gg~~~~~~~~i~~ 402 (403)
T PRK06289 374 -------GDYQVEGAKTFGTLNIGGSTTTTVSFVVG 402 (403)
T ss_pred -------cCccCCchheEEEEecCcccceEEEEEEe
Confidence 22233345567777776 55666666664
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-24 Score=207.25 Aligned_cols=283 Identities=18% Similarity=0.196 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++.+++ +++.+... .. . ....++..+|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID-----~~~~~~~~---------------------~~-----~----~~~~~~~~lG 69 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVD-----GYFCAGDA---------------------PG-----L----GPASMVDYLG 69 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEcCCC---------------------CC-----c----cHHHHHHhCC
Confidence 368999999999999999988887 65542110 00 0 0124888999
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH---H------------------------HHHHh
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL---S------------------------MAGFC 213 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~---~------------------------~~~~~ 213 (426)
+++ +...++++|+|+..+|..|+++|++|.+|+|||+|.|.+.... . +..+.
T Consensus 70 l~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~ 149 (388)
T PRK08142 70 LKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMC 149 (388)
T ss_pred CCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHH
Confidence 976 7788999999999999999999999999999999988643210 0 00000
Q ss_pred hhhhccccc-----------------CCCCCCC-Ccccc--------------cCCCcceeccceEEEEecchHHHHhcC
Q 014349 214 KSRALTTKY-----------------NGTPQEA-SRPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKRG 261 (426)
Q Consensus 214 ~~~~l~~~~-----------------~~~~~~~-~~pf~--------------~~~~G~~~geGa~alvL~~~~~A~~~g 261 (426)
....+.... ..+|... .+|++ ...+...++|||+|+||.+++.|++.+
T Consensus 150 a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~ 229 (388)
T PRK08142 150 AMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK 229 (388)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC
Confidence 000000000 0112111 11111 112344479999999999999999886
Q ss_pred CeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH-hhcc----
Q 014349 262 AKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDH---- 336 (426)
Q Consensus 262 ~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~-~~~~---- 336 (426)
. +.++|.|++..++..+...++........+++++|++||++|+|||++|+|..-|.. |..++..+ |+.+
T Consensus 230 ~-~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~----~~~~~E~lGl~~~Ge~~ 304 (388)
T PRK08142 230 R-PLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT----VLMQLEDLGFCKKGEGG 304 (388)
T ss_pred C-CCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH----HHHHHHHcCCCCCCchH
Confidence 4 458999999887765434444444455789999999999999999999999332222 33333333 1111
Q ss_pred -----c---C-CCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcE
Q 014349 337 -----A---T-SGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISA 405 (426)
Q Consensus 337 -----~---~-~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (426)
. . .+.+|||...+. .||+.+|+|+.+++++++||+...- ...|....++
T Consensus 305 ~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag--------------------~~rQV~~a~~ 364 (388)
T PRK08142 305 KFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAH--------------------PAVQVPNCDL 364 (388)
T ss_pred HHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCC--------------------CCCCCCCCcE
Confidence 0 1 267899988884 4899999999999999999987431 1123345678
Q ss_pred EEEecccc-c---cceeeeEeee
Q 014349 406 ALSNSFGF-G---GTNASLLFTK 424 (426)
Q Consensus 406 ~l~~~~g~-g---G~~~~~vl~~ 424 (426)
+|+.+.|- . +.++.+||++
T Consensus 365 gl~~~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 365 ALAHGTGGLLGSRHGSATLILER 387 (388)
T ss_pred EEEeCCCCCCcCCCceEEEEEec
Confidence 99988773 2 2346677664
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=210.95 Aligned_cols=269 Identities=20% Similarity=0.250 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+++++||+++|+++++++ .|++|+..... . ...++..++...|
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID-----~vi~G~~~~~~-----------------------~---~~~~ar~~a~~aG 77 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIE-----QLVFGQVVQMP-----------------------E---APNIAREIVLGTG 77 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCCCC-----------------------C---ccHHHHHHHHHCC
Confidence 368899999999999999998887 89998743110 0 1224556888999
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH-H--------------Hh-------h---
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA-G--------------FC-------K--- 214 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~-~--------------~~-------~--- 214 (426)
+. -|.++|+.+|+||+.|+..|+++|++|.+|++||+|+|+++...... . +. .
T Consensus 78 l~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (428)
T PRK08963 78 MNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRL 157 (428)
T ss_pred CCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccch
Confidence 96 39999999999999999999999999999999999999876432100 0 00 0
Q ss_pred ------------------hhhccc----ccCC------------------C----------------CCC-------CCc
Q 014349 215 ------------------SRALTT----KYNG------------------T----------------PQE-------ASR 231 (426)
Q Consensus 215 ------------------~~~l~~----~~~~------------------~----------------~~~-------~~~ 231 (426)
++..++ +++- . |.. ..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r 237 (428)
T PRK08963 158 RDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIR 237 (428)
T ss_pred hhccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCC
Confidence 000000 0000 0 100 011
Q ss_pred ------------c-cc------cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCC-CChHHHH
Q 014349 232 ------------P-FD------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPH-IDGKGAI 291 (426)
Q Consensus 232 ------------p-f~------~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~-~~~~~~~ 291 (426)
| |+ ...+...++|||+++||++++.|++.+.++.++|.+++.... .|. .......
T Consensus 238 ~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~-----~~~~~~~~~~~ 312 (428)
T PRK08963 238 GDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAI-----DVWQDMLLGPA 312 (428)
T ss_pred CCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccC-----CchhhhhhHHH
Confidence 0 10 011122369999999999999999999999999999887642 111 1123346
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccC---------------CCcc---eeccccc--cc
Q 014349 292 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHAT---------------SGSL---AFSSTKG--AI 351 (426)
Q Consensus 292 ~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~---------------~~~~---~v~s~k~--~~ 351 (426)
.+++++|+++|++++|||++|+| |++++..+...+.. ++.+ |||...+ .+
T Consensus 313 ~a~~~al~~AGl~~~DiD~~Ei~----------d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~ 382 (428)
T PRK08963 313 YATPLALERAGLTLADLTLIDMH----------EAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAY 382 (428)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEc----------cccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhc
Confidence 78999999999999999999999 77777655532221 2345 8888888 46
Q ss_pred chhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 352 GHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 352 Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
||+.+|+|+..++++++||+... .+++|+...+-||...++||++
T Consensus 383 GhP~gasG~~~~~e~~~qLrg~~----------------------------g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 383 GHPFAATGARMITQTLHELRRRG----------------------------GGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCCccccHHHHHHHHHHHHhhcC----------------------------CCEEEEEEccccChhhEEEEEe
Confidence 99999999999999999998632 3478899999999999999986
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-24 Score=206.94 Aligned_cols=279 Identities=20% Similarity=0.250 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHH-HHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASG-HVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~i~~~ 159 (426)
....|+.+|+++||+++|+++.+++ .|++|+..+... + . .++. .+...
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID-----~vi~g~~~~~~~-----------------------g--~-~~~~~~~~~~ 70 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVE-----EACLGQVLGAGE-----------------------G--Q-NCAQQAAMHA 70 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEccCCcc-----------------------c--C-cHHHHHHHHc
Confidence 3567889999999999999988887 888887542210 0 0 1111 25566
Q ss_pred cCCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-------HHH----Hh--------------
Q 014349 160 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-------MAG----FC-------------- 213 (426)
Q Consensus 160 lgl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~-------~~~----~~-------------- 213 (426)
+|+.+ |+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... +.. +.
T Consensus 71 lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~ 150 (393)
T cd00826 71 GGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQA 150 (393)
T ss_pred CCCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHH
Confidence 78776 99999999999999999999999999999999999998653210 000 00
Q ss_pred hhhhccccc------------C--------CCCCCCC-cccc-----------------cCCCcceeccceEEEEecchH
Q 014349 214 KSRALTTKY------------N--------GTPQEAS-RPFD-----------------CGRDGFVIGEGSGVLVLEELE 255 (426)
Q Consensus 214 ~~~~l~~~~------------~--------~~~~~~~-~pf~-----------------~~~~G~~~geGa~alvL~~~~ 255 (426)
....+.+.. + .+|.... +|.+ ...+...++|||+++||.+++
T Consensus 151 ~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~ 230 (393)
T cd00826 151 GAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEA 230 (393)
T ss_pred HHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHH
Confidence 000000000 0 0111111 1111 111222368999999999999
Q ss_pred HHHhcCC-eeeEEEEeEEEecCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHH
Q 014349 256 HAKKRGA-KIYAEVRGYGMSGDAHH-ITQPH----IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI 329 (426)
Q Consensus 256 ~A~~~g~-~~~a~i~g~~~~~d~~~-~~~~~----~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~ 329 (426)
.|++.+. ...++|.+.+...+... ...|. ....+...+++++|+++||+++|||++|+| |++++
T Consensus 231 ~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~----------d~Fa~ 300 (393)
T cd00826 231 EAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAH----------DAFAA 300 (393)
T ss_pred HHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehh----------hhhHH
Confidence 9998773 22245555554433221 12222 223345789999999999999999999999 89888
Q ss_pred HHHhhcccC-------------------CCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC
Q 014349 330 RTVFSDHAT-------------------SGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 388 (426)
Q Consensus 330 ~~~~~~~~~-------------------~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~ 388 (426)
..+...+.. ++.+|||...+ .+||+.||+|+.+++++++||+...
T Consensus 301 ~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~a-------------- 366 (393)
T cd00826 301 NACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEA-------------- 366 (393)
T ss_pred HHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhh--------------
Confidence 888643332 23589998888 4599999999999999999998643
Q ss_pred CCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 389 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
...|..+.+++++.+.| |..+++|++
T Consensus 367 -------g~~q~~~~~~~~~~~~G--g~g~a~~~~ 392 (393)
T cd00826 367 -------GKRQGAGAGLALLCIGG--GGGAAMCIE 392 (393)
T ss_pred -------ccccCCCcCEEEEEcCC--CceeEEEEe
Confidence 22333446788877666 456667775
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=202.53 Aligned_cols=276 Identities=20% Similarity=0.202 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHcC-CCC-CCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 82 FIAYALCAADEALHDAK-WLP-SDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAG-l~~-~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
...|+.+|+++||+||| +++ .+++ ++++++. ..+ .... .....+...
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId-----~~~~~~~-~~~------------------~~~~-------~~~~~~~~~ 73 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVD-----SFISCQE-DFW------------------EGIA-------IADEFAPDQ 73 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCC-----EEEEecC-ccc------------------Cccc-------ccchhHHHH
Confidence 47899999999999999 986 6887 7877531 110 0000 011235577
Q ss_pred cCCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH------------------------HHHHhh
Q 014349 160 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS------------------------MAGFCK 214 (426)
Q Consensus 160 lgl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~------------------------~~~~~~ 214 (426)
+|+. .|.+.+ |+|+..++..|+++|++|.+|+|||+|++.+..... +..+..
T Consensus 74 lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a 150 (385)
T PRK06066 74 IGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDA 150 (385)
T ss_pred cccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHH
Confidence 8885 477776 889999999999999999999999999986432100 001111
Q ss_pred hhhccccc-----------------CCCCCCCC-cccc--------------cCCCcceeccceEEEEecchHHHHhcCC
Q 014349 215 SRALTTKY-----------------NGTPQEAS-RPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGA 262 (426)
Q Consensus 215 ~~~l~~~~-----------------~~~~~~~~-~pf~--------------~~~~G~~~geGa~alvL~~~~~A~~~g~ 262 (426)
.+.+.... ..+|.... +|.+ ...+...++|||+++||.+++.|++.+.
T Consensus 151 ~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~ 230 (385)
T PRK06066 151 VKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTD 230 (385)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCC
Confidence 11110000 00111100 0111 0123334899999999999999998887
Q ss_pred eeeEEEEeEEEecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCCHHHHHHHHHHhhccc--
Q 014349 263 KIYAEVRGYGMSGDAHHITQPHI-DGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA-- 337 (426)
Q Consensus 263 ~~~a~i~g~~~~~d~~~~~~~~~-~~~~~~~a~~~al~~agl~--~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~-- 337 (426)
++. +|+|++...+.......+. .......+.+++|+++|++ ++|||++|+| |++++..+...+.
T Consensus 231 ~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~----------D~Ft~~~l~~~e~lG 299 (385)
T PRK06066 231 DPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVD----------DRYSYKELQHIEALR 299 (385)
T ss_pred CCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEe----------cCChHHHHHHHHHcC
Confidence 774 9999988765332211111 1222347999999999998 6999999999 6666555543221
Q ss_pred -----------------CCCcceecccccc--cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccC
Q 014349 338 -----------------TSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 398 (426)
Q Consensus 338 -----------------~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 398 (426)
.++++|||...+. .||+.+|+|+.+++++++||+... ...
T Consensus 300 ~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~A---------------------g~r 358 (385)
T PRK06066 300 LSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEA---------------------GAR 358 (385)
T ss_pred CCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccc---------------------ccc
Confidence 2357899999884 599999999999999999998854 233
Q ss_pred CCCCCcEEEEeccc--cccceeeeEeee
Q 014349 399 KDMPISAALSNSFG--FGGTNASLLFTK 424 (426)
Q Consensus 399 ~~~~~~~~l~~~~g--~gG~~~~~vl~~ 424 (426)
| .+.+++++.+.| +++..+.+||++
T Consensus 359 Q-~~a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 359 Q-GKAERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred C-CCCcEEEEcCCCccCCccEEEEEEeC
Confidence 4 457788888876 567778888875
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-24 Score=208.31 Aligned_cols=270 Identities=23% Similarity=0.317 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ .|++|+.... + . ....+..++..+|
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID-----~vi~g~~~~~--------------------~----~--~~~~a~~v~~~lG 75 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLD-----EVILGCAMPS--------------------P----D--EANIARVVALRLG 75 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC--------------------C----C--cChHHHHHHHHhC
Confidence 478999999999999999999888 8999864211 0 0 0134456888999
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH----------------------H-------H
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------------------M-------A 210 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~----------------------~-------~ 210 (426)
+.. |.++++.+|+|++.+|..|+++|++|++|++||+|+|.+..... + .
T Consensus 76 l~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (426)
T PRK08170 76 CGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRP 155 (426)
T ss_pred cCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccc
Confidence 953 99999999999999999999999999999999999997543110 0 0
Q ss_pred HH-----------h------hhhhcccc----c----------------C--C------------------CCCC-----
Q 014349 211 GF-----------C------KSRALTTK----Y----------------N--G------------------TPQE----- 228 (426)
Q Consensus 211 ~~-----------~------~~~~l~~~----~----------------~--~------------------~~~~----- 228 (426)
.+ . .++...++ + + . +|..
T Consensus 156 ~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~ 235 (426)
T PRK08170 156 SYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGV 235 (426)
T ss_pred cccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCC
Confidence 00 0 00000000 0 0 0 0000
Q ss_pred ----------CCcc-cccC------CCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHH
Q 014349 229 ----------ASRP-FDCG------RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 291 (426)
Q Consensus 229 ----------~~~p-f~~~------~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~ 291 (426)
..+| |+.. .+...++|||+++||++++.|++.+.++.++|.+++.... .|.....+..
T Consensus 236 r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~-----~~~~~~~~~~ 310 (426)
T PRK08170 236 RPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAAL-----DPSQMGLGPV 310 (426)
T ss_pred CCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeee-----CchhhcccHH
Confidence 0111 1100 2333479999999999999999999888889999877653 2222233457
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccC------------------CCcceeccccc--cc
Q 014349 292 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHAT------------------SGSLAFSSTKG--AI 351 (426)
Q Consensus 292 ~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~------------------~~~~~v~s~k~--~~ 351 (426)
.+++++|+++||+|+|||++|+| |++++..+...+.. -...|||...+ .+
T Consensus 311 ~a~~~al~~aGl~~~did~~ei~----------daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~ 380 (426)
T PRK08170 311 HAATPLLQRHGLTLEDLDLWEIN----------EAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIAL 380 (426)
T ss_pred HHHHHHHHHcCCCHHHcCEEEec----------chhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHh
Confidence 89999999999999999999999 99988777432100 02357888888 56
Q ss_pred chhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 352 GHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 352 Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
||+.||||+.++..++.+|++. +.++++++...-||...++||++.
T Consensus 381 GHP~GAtG~~~~~~l~~~l~~~----------------------------~~~~g~~~~c~~gg~g~a~~~e~~ 426 (426)
T PRK08170 381 GHPVGASGARIVLHLLHALKRR----------------------------GTKRGIAAICIGGGQGGAMLLERV 426 (426)
T ss_pred CCCccCccHHHHHHHHHHHHhh----------------------------CCCeEEEEEecCCChhheEEEEeC
Confidence 9999999999999999999751 245788888899999999999874
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-24 Score=206.07 Aligned_cols=271 Identities=19% Similarity=0.226 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|+|+++++++ +|++|+.... .. . ...++..+....|
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID-----~vv~g~~~~~-------------------~~-----~-~~~~~~~~~l~~g 75 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVD-----DVIFGCVDTI-------------------GP-----Q-AGNIARTSWLAAG 75 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC-----EEEEEeeccC-------------------Cc-----c-cccHHHHHHHHcC
Confidence 467999999999999999998887 8888752100 00 0 0001222222344
Q ss_pred C--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH--H--HH---H----------H-hhhh----
Q 014349 162 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL--S--MA---G----------F-CKSR---- 216 (426)
Q Consensus 162 l--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~--~--~~---~----------~-~~~~---- 216 (426)
+ ..|.++++.+|+|++.|+..|+++|++|++|++||+|+|.+.. +. . .. . + ...+
T Consensus 76 l~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 155 (382)
T PRK07801 76 LPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEV 155 (382)
T ss_pred CCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCC
Confidence 4 4588999999999999999999999999999999999996533 21 0 00 0 0 0000
Q ss_pred -------hcccccCC------------------CCCC----------------------------CCcccc-----cCCC
Q 014349 217 -------ALTTKYNG------------------TPQE----------------------------ASRPFD-----CGRD 238 (426)
Q Consensus 217 -------~l~~~~~~------------------~~~~----------------------------~~~pf~-----~~~~ 238 (426)
.+..+++. .|.. ..+|.. ...+
T Consensus 156 ~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d 235 (382)
T PRK07801 156 SQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAV 235 (382)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCccccc
Confidence 00001100 0000 011111 1223
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
...++|||+++||++++.|++++.+++++|.+++...+... ....+...+++++|+++|++|+|||++|+|
T Consensus 236 ~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~a~~~a~~~agi~~~did~~e~~---- 306 (382)
T PRK07801 236 ASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPV-----FMLTAPIPATRYALEKTGLSIDDIDVVEIN---- 306 (382)
T ss_pred CCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChH-----hhccChHHHHHHHHHHcCCCHHHcCEeeec----
Confidence 33478999999999999999999888899999876653211 011223578999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCC-Ccceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcc
Q 014349 319 PLGDTVEATAIRTVFSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL 395 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~-~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~ 395 (426)
|++++..+...+..+ -+-|||...+ .+||+.+|+|+.+++.+++||+..
T Consensus 307 ------d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~---------------------- 358 (382)
T PRK07801 307 ------EAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT---------------------- 358 (382)
T ss_pred ------ccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc----------------------
Confidence 888888877655432 1235666665 679999999999999999999861
Q ss_pred ccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 396 TASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 396 ~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++++.++.|.||+.+++||++.
T Consensus 359 ------~~~~gl~~~~gggg~~~~~vl~~~ 382 (382)
T PRK07801 359 ------GGRYGLQTMCEGGGTANVTIIERL 382 (382)
T ss_pred ------CCCEEEEEEcccccceeEEEEEeC
Confidence 135788888988999999999863
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=203.23 Aligned_cols=270 Identities=19% Similarity=0.202 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCC
Q 014349 83 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 162 (426)
Q Consensus 83 ~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl 162 (426)
..|+.+++++||+++|+++.+++ .+++|+.... +.....++..+...-||
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id-----~vi~G~~~~~-------------------------~~~~~~~ar~~~l~~gl 76 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIE-----DVIMGCVSQV-------------------------GEQATNVARNAVLASKL 76 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccc-------------------------ccccccHHHHHHHHcCC
Confidence 68899999999999999998888 8999874310 00001122222233355
Q ss_pred --CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-HHH---------------Hhh--------h-
Q 014349 163 --QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-MAG---------------FCK--------S- 215 (426)
Q Consensus 163 --~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~-~~~---------------~~~--------~- 215 (426)
.-|.++|+.+|+||+.|+..|++.|++|++|++||+|+|++..... ... +.. +
T Consensus 77 ~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (390)
T PRK06504 77 PESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQF 156 (390)
T ss_pred CCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHH
Confidence 3499999999999999999999999999999999999998764221 000 000 0
Q ss_pred ---hhcccccCC---------------------------------------CC-----CC------------CCccccc-
Q 014349 216 ---RALTTKYNG---------------------------------------TP-----QE------------ASRPFDC- 235 (426)
Q Consensus 216 ---~~l~~~~~~---------------------------------------~~-----~~------------~~~pf~~- 235 (426)
..+..+++- .| ++ ..+|...
T Consensus 157 ~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~ 236 (390)
T PRK06504 157 TGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEG 236 (390)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCC
Confidence 000000100 00 00 1112210
Q ss_pred ----CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 014349 236 ----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 311 (426)
Q Consensus 236 ----~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v 311 (426)
..+.-.++|||+++||.+++.|++.+.++.++|.+++.... .+.....+...+++++|+++|++|+|||++
T Consensus 237 g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~-----~~~~~~~~~~~a~~~a~~~agl~~~Did~~ 311 (390)
T PRK06504 237 GRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGG-----DPVIMLEAPLPATERALKKAGMKIDDIDLY 311 (390)
T ss_pred CCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeec-----CchhhhccHHHHHHHHHHHcCCCHHHCCEE
Confidence 11233378999999999999999988888778888776543 121122345679999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhhcccCCC-cceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC
Q 014349 312 NAHATSTPLGDTVEATAIRTVFSDHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF 388 (426)
Q Consensus 312 ~~hgtgt~~~D~~E~~a~~~~~~~~~~~~-~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~ 388 (426)
|+| |++++..+...+..+. +.|+|...+ .+||+.+|+|+.++...+.+|++.
T Consensus 312 Ei~----------d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~--------------- 366 (390)
T PRK06504 312 EVN----------EAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR--------------- 366 (390)
T ss_pred Eec----------ccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh---------------
Confidence 999 8888888776554331 235666666 679999999999999999999851
Q ss_pred CCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 389 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+.++.+.++.|.||..+++||+++
T Consensus 367 -------------~~~~gl~~~~~ggg~g~a~ile~~ 390 (390)
T PRK06504 367 -------------GKRYGLQTMCEGGGMANVTIVERL 390 (390)
T ss_pred -------------CCCeEEEEEeecccceeEEEEEeC
Confidence 235778888887899999999863
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.4e-24 Score=207.72 Aligned_cols=270 Identities=21% Similarity=0.282 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+++++||+++|+++.+++ .|++|+..+.. ....++..++...|
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id-----~vi~G~~~~~~--------------------------~~~~~ar~~~l~aG 79 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIE-----QLVFGQVVQMP--------------------------EAPNIAREIVLGTG 79 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCcC--------------------------ccchHHHHHHHhCC
Confidence 468999999999999999998887 78998743110 01235556666678
Q ss_pred CC-C-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHH----------------H-----------
Q 014349 162 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMA----------------G----------- 211 (426)
Q Consensus 162 l~-g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~~~----------------~----------- 211 (426)
+. + |.++|+.+|+||+.|+..|+++|++|++|++||+|+|+++. |.... .
T Consensus 80 l~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (430)
T TIGR02446 80 MNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGL 159 (430)
T ss_pred CCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchh
Confidence 86 4 89999999999999999999999999999999999999863 11100 0
Q ss_pred ---H--h----------hhhhccc----cc------------------C----------------CCCCCCC-------c
Q 014349 212 ---F--C----------KSRALTT----KY------------------N----------------GTPQEAS-------R 231 (426)
Q Consensus 212 ---~--~----------~~~~l~~----~~------------------~----------------~~~~~~~-------~ 231 (426)
+ . .++.... ++ . .+|.... |
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r 239 (430)
T TIGR02446 160 KDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIR 239 (430)
T ss_pred hhhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCC
Confidence 0 0 0000000 00 0 0010000 1
Q ss_pred ------------c-cc------cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHH
Q 014349 232 ------------P-FD------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAIL 292 (426)
Q Consensus 232 ------------p-f~------~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~ 292 (426)
| |+ ...+...++|||+++||.+++.|++.+.++.++|.+++....... .. .......
T Consensus 240 ~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~-~~---~~~~~~~ 315 (430)
T TIGR02446 240 HNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVW-QD---MLMGPSY 315 (430)
T ss_pred CCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCch-Hh---hcccHHH
Confidence 0 11 012233379999999999999999988888889999886632110 01 1122357
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccC---------------CCcc---eeccccc--ccc
Q 014349 293 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHAT---------------SGSL---AFSSTKG--AIG 352 (426)
Q Consensus 293 a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~---------------~~~~---~v~s~k~--~~G 352 (426)
+++++|+++|++++|||++|+| |++++..+...+.. ++.+ |||...+ ..|
T Consensus 316 a~~~al~~Agl~~~Did~~Ei~----------daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~G 385 (430)
T TIGR02446 316 ATPLALQRAGLALSDLTLIDMH----------EAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYG 385 (430)
T ss_pred HHHHHHHHcCCCHHHCCEEEec----------cccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcC
Confidence 8999999999999999999999 77777766543322 1345 7888888 569
Q ss_pred hhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 353 HLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 353 h~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
|+.+|+|+..++++++||+... . ++.+......||...++|+++
T Consensus 386 hP~gatG~~~v~e~~~qL~g~a---------------------g-------~~g~~~~~~~GG~g~a~iie~ 429 (430)
T TIGR02446 386 HPFAATGARMITQTLRELKRRG---------------------G-------GLGLNTACAAGGLGAAMILEV 429 (430)
T ss_pred CCccccHHHHHHHHHHHHhhcC---------------------C-------CccEEEEEecCcceEEEEEEe
Confidence 9999999999999999998632 1 122445556667778888875
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-22 Score=193.17 Aligned_cols=270 Identities=20% Similarity=0.234 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCC
Q 014349 83 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 162 (426)
Q Consensus 83 ~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl 162 (426)
..|+..+.+++|+++|+++.+++ .|++|+.... +.....++..++..-||
T Consensus 30 ~~L~~~~~~~~l~r~~i~~~~id-----~vi~G~~~~~-------------------------g~~g~n~aR~~al~agl 79 (417)
T PRK06025 30 QHLAATVLKALAERNGLNTADVD-----DIIWSTSSQR-------------------------GKQGGDLGRMAALDAGY 79 (417)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC-----EEEEEcCCCc-------------------------CcccCcHHHHHHHhCCC
Confidence 46778899999999999988887 8999874311 11012356677777787
Q ss_pred C--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH------H-----Hh-------------hhh
Q 014349 163 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA------G-----FC-------------KSR 216 (426)
Q Consensus 163 ~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~------~-----~~-------------~~~ 216 (426)
. -|.++|+..|+||+.||..|++.|++|++|++|+||+|+++....+. . .. .++
T Consensus 80 p~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg 159 (417)
T PRK06025 80 DIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQG 159 (417)
T ss_pred CCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHH
Confidence 4 49999999999999999999999999999999999999987433210 0 00 000
Q ss_pred h----ccccc----------------------------------C-------CCCCCCCc------------c-ccc---
Q 014349 217 A----LTTKY----------------------------------N-------GTPQEASR------------P-FDC--- 235 (426)
Q Consensus 217 ~----l~~~~----------------------------------~-------~~~~~~~~------------p-f~~--- 235 (426)
. +..++ . .+.++..| | |+.
T Consensus 160 ~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~ 239 (417)
T PRK06025 160 VCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIAD 239 (417)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCcccccc
Confidence 0 00000 0 01111122 1 331
Q ss_pred ---CCCcc-------------------------eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCCh
Q 014349 236 ---GRDGF-------------------------VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDG 287 (426)
Q Consensus 236 ---~~~G~-------------------------~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~ 287 (426)
..+|. .++|||+++||++++.|++++.+++++|.|++...+. |...+
T Consensus 240 ~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~-----p~~~~ 314 (417)
T PRK06025 240 YPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDD-----PTLML 314 (417)
T ss_pred ccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCC-----chhhc
Confidence 01343 2699999999999999999999999999999888643 22222
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC---CcceecccccccchhHHhHHHHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAI 364 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~---~~~~v~s~k~~~Gh~~~AsG~~~l~ 364 (426)
.+...+++++|+++|++++|||++|+| |+++...+...+..+ .++.++..+-.+||+.|++|+..++
T Consensus 315 ~~p~~Ai~~aL~~AGl~~~DID~~ei~----------eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~ 384 (417)
T PRK06025 315 NAPVPAAKKVLAKAGLTKDDIDLWEIN----------EAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIG 384 (417)
T ss_pred ccHHHHHHHHHHHcCCCHHHCcEEEEc----------hHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHH
Confidence 334679999999999999999999999 888766544322211 2444555555899999999999999
Q ss_pred HHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 365 FAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 365 ~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.++.+|+.+ ..++.++...+.||...++||++.
T Consensus 385 ~ll~qL~~~----------------------------g~~~Gl~~~c~~GG~g~A~lle~~ 417 (417)
T PRK06025 385 TVLDELERR----------------------------GLKRGLVTMCAAGGMAPAIIIERV 417 (417)
T ss_pred HHHHHHHHh----------------------------CCCeEEEEEEeeccceeEEEEEeC
Confidence 999999752 134567888889999999999873
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-22 Score=190.79 Aligned_cols=265 Identities=22% Similarity=0.283 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCC
Q 014349 83 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 162 (426)
Q Consensus 83 ~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl 162 (426)
..|+..+.+++++ |++ .+++ .|++|+..+.. ...+..++...|+
T Consensus 26 ~~L~~~a~~~~~~--gi~-~~Id-----~vi~G~~~~~~----------------------------~~~~r~~~~~~Gl 69 (361)
T PRK06690 26 QQLAAPLLTFLSK--GME-REID-----DVILGNVVGPG----------------------------GNVARLSALEAGL 69 (361)
T ss_pred HHHHHHHHHHHHc--cch-hhcC-----EEEEEecCCCc----------------------------chHHHHHHHHcCC
Confidence 6788888888744 885 6777 89998743210 1223457778888
Q ss_pred C-C-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH--HHH-----h--hhhhcc----ccc-----
Q 014349 163 Q-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--AGF-----C--KSRALT----TKY----- 222 (426)
Q Consensus 163 ~-g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~--~~~-----~--~~~~l~----~~~----- 222 (426)
. + |+++|+++|+||+.|+..|++.|++|++|++||+|+|.++..... ..+ . .++..+ .++
T Consensus 70 ~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre 149 (361)
T PRK06690 70 GLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITRE 149 (361)
T ss_pred CCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHH
Confidence 6 4 999999999999999999999999999999999999988652210 000 0 001000 000
Q ss_pred ----------------CCCCC-------------CCC-------------cc-ccc-----CCCcceeccceEEEEecch
Q 014349 223 ----------------NGTPQ-------------EAS-------------RP-FDC-----GRDGFVIGEGSGVLVLEEL 254 (426)
Q Consensus 223 ----------------~~~~~-------------~~~-------------~p-f~~-----~~~G~~~geGa~alvL~~~ 254 (426)
..+|. ... +| |+. ..+...++|||+++||+++
T Consensus 150 ~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~ 229 (361)
T PRK06690 150 MQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEE 229 (361)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecH
Confidence 00010 001 11 211 1112226999999999999
Q ss_pred HHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhh
Q 014349 255 EHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 334 (426)
Q Consensus 255 ~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~ 334 (426)
+.|++++.++.++|.+++.... .|.....+...+++++|+++|++++|||++|+| |++++..++.
T Consensus 230 e~A~~lg~~p~~~i~~~~~~~~-----~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~----------eafa~~~~~~ 294 (361)
T PRK06690 230 GQARKLGYKPVLRFVRSAVVGV-----DPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEIN----------EAFASKVVAC 294 (361)
T ss_pred HHHHHcCCCceEEEEEEEEecc-----CcccchhHHHHHHHHHHHHcCCCHHHcCEeeec----------chhHHHHHHH
Confidence 9999999888889999886542 122233466889999999999999999999999 9999999987
Q ss_pred cccCCC-cceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEecc
Q 014349 335 DHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSF 411 (426)
Q Consensus 335 ~~~~~~-~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 411 (426)
.+..+- +-+++...+ .+||+.|++|+.+++.++.+|++. ..++.++...
T Consensus 295 ~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~----------------------------~~~~g~~~~c 346 (361)
T PRK06690 295 AKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE----------------------------DMKYGIATLG 346 (361)
T ss_pred HHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh----------------------------CCCEEEEEEc
Confidence 664331 123444444 679999999999999999999752 2467888888
Q ss_pred ccccceeeeEeeecC
Q 014349 412 GFGGTNASLLFTKCQ 426 (426)
Q Consensus 412 g~gG~~~~~vl~~~~ 426 (426)
.-||...++|+++.+
T Consensus 347 ~~gG~g~a~~~e~~~ 361 (361)
T PRK06690 347 IGGGIGLALLFEKVE 361 (361)
T ss_pred ccCcceeEEEEEecC
Confidence 888999999999864
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=197.95 Aligned_cols=272 Identities=19% Similarity=0.184 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH--
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK-- 159 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~-- 159 (426)
...|+.+++++||+++|+++.+++ .+++|+..+... ...++..++..
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id-----~vv~G~~~~~~~--------------------------~~~~~r~~~l~~g 79 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLG-----EVVAGAVLKHSR--------------------------DFNLTRECVLGSA 79 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCCc--------------------------cccHHHHHHHHcC
Confidence 468999999999999999998888 899987432100 01123344444
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH-H----------------------------
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-A---------------------------- 210 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~-~---------------------------- 210 (426)
++...|+++|+++|+||+.|+..|++.|++|.+|++||+|+|+++..... .
T Consensus 80 l~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (427)
T PRK09268 80 LSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRP 159 (427)
T ss_pred CCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccc
Confidence 44457999999999999999999999999999999999999987642110 0
Q ss_pred --------H----H-h-hhhhcc----ccc------------------CC-----------CCC------CCCc------
Q 014349 211 --------G----F-C-KSRALT----TKY------------------NG-----------TPQ------EASR------ 231 (426)
Q Consensus 211 --------~----~-~-~~~~l~----~~~------------------~~-----------~~~------~~~~------ 231 (426)
. + . .++.+. .++ .. .|. ...|
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e 239 (427)
T PRK09268 160 KHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLE 239 (427)
T ss_pred ccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHH
Confidence 0 0 0 000000 000 00 122 1111
Q ss_pred ------c-cccCCCcc-------eeccceEEEEecchHHHHhcCCeeeEEE-EeEEEecCCCCCCCCCCChHHHHHHHHH
Q 014349 232 ------P-FDCGRDGF-------VIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHITQPHIDGKGAILAMTR 296 (426)
Q Consensus 232 ------p-f~~~~~G~-------~~geGa~alvL~~~~~A~~~g~~~~a~i-~g~~~~~d~~~~~~~~~~~~~~~~a~~~ 296 (426)
| |+...+|. .++|||+++||.+++.|++.+.+|..+| .+.....+..+ .+.........++++
T Consensus 240 ~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~--~~~~~~~~~~~a~~~ 317 (427)
T PRK09268 240 KLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVH--GKEGLLMAPAYAVPR 317 (427)
T ss_pred HHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccc--ccchhhccHHHHHHH
Confidence 1 22111232 3899999999999999999888886666 44444444321 111112244679999
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhc---c-------cC--------CCcceecccccc--cchhHH
Q 014349 297 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD---H-------AT--------SGSLAFSSTKGA--IGHLLG 356 (426)
Q Consensus 297 al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~---~-------~~--------~~~~~v~s~k~~--~Gh~~~ 356 (426)
+|+++|++|+|||++|+| |++++..+... + .. -...|||...+. +||+.+
T Consensus 318 a~~~AGl~~~Did~~Ei~----------d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~g 387 (427)
T PRK09268 318 LLARNGLTLQDFDFYEIH----------EAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFA 387 (427)
T ss_pred HHHHcCCCHHHCCEEEec----------cccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcc
Confidence 999999999999999999 88887743321 1 00 024788888884 599999
Q ss_pred hHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 357 AAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 357 AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
|+|+..++++++||+.+ ..++.++....-||...++||++
T Consensus 388 ATG~~~v~e~~~QL~~~----------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 388 ATGGRIVATLAKLLAEK----------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred cchHHHHHHHHHHHHhc----------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 99999999999999752 24588999999999999999985
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-22 Score=180.15 Aligned_cols=245 Identities=27% Similarity=0.349 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+..+|...|++.||+++.+++.+.. -||+|.- ++..+...++.+.+.--
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~-----eVi~GnV--------------------------l~AnlGQapaRQaalgA 77 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVA-----EVIFGNV--------------------------LSANLGQAPARQAALGA 77 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhh-----hhhhccc--------------------------cccccCcchHHHHHhhc
Confidence 4578889999999999998776554 5666642 12233446677777777
Q ss_pred CCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhh---------------cccccC
Q 014349 161 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRA---------------LTTKYN 223 (426)
Q Consensus 161 gl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~---------------l~~~~~ 223 (426)
||. -|+.+|.--|+|++.|+.+|++.|+.|..|++++||.|+|+..+.+. ..+.+. |.+.|+
T Consensus 78 Glp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~-~~R~g~~~G~~~l~Dgi~~DGL~D~y~ 156 (396)
T KOG1390|consen 78 GLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLY-VARGGVKYGGVQLVDGIVKDGLTDAYD 156 (396)
T ss_pred CCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchh-hhccCcCcCCeeeeechhhcchHHHhc
Confidence 774 38899999999999999999999999999999999999987655111 110000 000000
Q ss_pred C-----------------------------------------------------------CCCC------------CCcc
Q 014349 224 G-----------------------------------------------------------TPQE------------ASRP 232 (426)
Q Consensus 224 ~-----------------------------------------------------------~~~~------------~~~p 232 (426)
. +.++ ..+|
T Consensus 157 ~~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~ 236 (396)
T KOG1390|consen 157 KCHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRP 236 (396)
T ss_pred cCCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccc
Confidence 0 0000 0111
Q ss_pred cccCCCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 014349 233 FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 305 (426)
Q Consensus 233 f~~~~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~ 305 (426)
.=...+|.+ +.|||+|+||.+.+.+.+.|.+|+|+|.+|+... ..|.....+...++.++|+++|+..
T Consensus 237 vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa-----~~P~df~iaP~laipk~lk~aG~~~ 311 (396)
T KOG1390|consen 237 VFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAA-----TEPIDFTIAPALAIPKALKKAGLEQ 311 (396)
T ss_pred eeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhc-----cChhhcccchHHHHHHHHHHcCcch
Confidence 111122222 8999999999999999999999999999998654 2343333445788999999999999
Q ss_pred CCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceeccccc---ccchhHHhHHHHHHHHHHHHHHh
Q 014349 306 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG---AIGHLLGAAGAVEAIFAVLAIHH 372 (426)
Q Consensus 306 ~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~---~~Gh~~~AsG~~~l~~~~~~l~~ 372 (426)
+||||+|++ |+++...+...+.++..+...++.+ .+|||+|+||+.-++..++.|+.
T Consensus 312 sdVd~~EiN----------EAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 312 SDVDYWEIN----------EAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred hhhhHHhhh----------hhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 999999999 9998877765544333333333333 89999999999999999999987
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-21 Score=188.53 Aligned_cols=253 Identities=17% Similarity=0.160 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++.+++ .++++++... . .....+..++..+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id-----~li~~~~~~~---------------------~-----~~p~~a~~v~~~L 142 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID-----AVIVACSNMQ---------------------R-----AYPAMAIEIQQAL 142 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC---------------------C-----CCcHHHHHHHHhc
Confidence 4568999999999999999888876 7777764211 0 1122356799999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++++++++..+|+|++.||..|+++|++|.++.+||+++|.+.... -|.....++
T Consensus 143 gl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------------~~~d~~~~~ 198 (372)
T PRK07515 143 GIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL------------------------NFRDRDSHF 198 (372)
T ss_pred CCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------------cccCCCCCE
Confidence 99999999999999999999999999999999999999999732110 022233579
Q ss_pred eeccceEEEEecchHHHHhcC-CeeeEEEEeE------------EEecCCCCCCCCCC----ChH--------HHHHHHH
Q 014349 241 VIGEGSGVLVLEELEHAKKRG-AKIYAEVRGY------------GMSGDAHHITQPHI----DGK--------GAILAMT 295 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g-~~~~a~i~g~------------~~~~d~~~~~~~~~----~~~--------~~~~a~~ 295 (426)
++||||+|+||++.+.+..++ ..++...... ....+..+...+.. ++. ...++++
T Consensus 199 lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 278 (372)
T PRK07515 199 IFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIV 278 (372)
T ss_pred EecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHH
Confidence 999999999999876543222 2344432111 00001111111111 222 2467899
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCc
Q 014349 296 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 375 (426)
Q Consensus 296 ~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~ 375 (426)
++|+++|++++|||++.+|.++++..|.+ ++++|+......+.+ ..-..+||+.+|+=.+.+..+ + +.+
T Consensus 279 ~~L~~~gl~~~dId~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~--~~~~~~GNt~sasi~~~L~~~----~-~~~ 347 (372)
T PRK07515 279 EHLAENGLTPADVKRFWLHQANINMNQLI----GKKVLGRDATPEEAP--VILDEYANTSSAGSIIAFHKH----S-DDL 347 (372)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHHHHHH----HHHhccCCCChhhce--EeHHhcCCchhhHHHHHHHHH----h-ccC
Confidence 99999999999999999999999987764 445455321001112 235688999988865544332 1 111
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 376 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 376 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.+.+.++..+||.|-+-.++||+|
T Consensus 348 -------------------------~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 348 -------------------------AAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred -------------------------CCCCEEEEEEecccHHHHHHHhcc
Confidence 123567778899887777787775
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-20 Score=178.52 Aligned_cols=274 Identities=19% Similarity=0.135 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ +++++... . .. ...++..+|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID-----~~~~~~~~-~-----------------------~~-------~~~l~~~lG 67 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVD-----GLVTFTMD-T-----------------------NP-------EIAVARALG 67 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEecCc-c-----------------------cc-------HHHHHHHCC
Confidence 467999999999999999988887 77763210 0 00 024888899
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeec--CCCCCh------------------------------H
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT--ESSIDA------------------------------L 207 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~--d~~~~~------------------------------~ 207 (426)
+++ +...+.++|+|+..+|..|+++|++|.||+|||+|. +..... .
T Consensus 68 l~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 147 (386)
T PRK07855 68 IGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPA 147 (386)
T ss_pred CCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChH
Confidence 976 445789999999999999999999999999999987 221000 0
Q ss_pred HHHHHhhhhhccccc-----------------CCCCCCCC--ccccc--------------CCCcceeccceEEEEecch
Q 014349 208 SMAGFCKSRALTTKY-----------------NGTPQEAS--RPFDC--------------GRDGFVIGEGSGVLVLEEL 254 (426)
Q Consensus 208 ~~~~~~~~~~l~~~~-----------------~~~~~~~~--~pf~~--------------~~~G~~~geGa~alvL~~~ 254 (426)
.+..+.....+.... ..+|.... +|++. .-+...++|||+|+||.++
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~se 227 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSA 227 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecH
Confidence 000000000000000 11222221 12221 0233448999999999999
Q ss_pred HHHHhcCCeeeEEEEeEEEecCCCCCC-----CCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHH
Q 014349 255 EHAKKRGAKIYAEVRGYGMSGDAHHIT-----QPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATA 328 (426)
Q Consensus 255 ~~A~~~g~~~~a~i~g~~~~~d~~~~~-----~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a 328 (426)
+.|++.+.++ ++|.|++..++..... .++.. ......+++++|+++|++++|||++|+|..-|.. |...
T Consensus 228 e~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~~----~l~~ 302 (386)
T PRK07855 228 ERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTPF----VLMQ 302 (386)
T ss_pred HHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcHH----HHHH
Confidence 9999887766 6999998765433111 11111 1234579999999999999999999999332222 3333
Q ss_pred HHHH-hhcc------------cCCCcceeccccccc--chhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCC
Q 014349 329 IRTV-FSDH------------ATSGSLAFSSTKGAI--GHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFM 393 (426)
Q Consensus 329 ~~~~-~~~~------------~~~~~~~v~s~k~~~--Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~ 393 (426)
++.+ |..+ ..++.+|||...+.+ ||+. |+.+++++++||+...
T Consensus 303 ~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLrG~a------------------- 360 (386)
T PRK07855 303 LEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLRGTS------------------- 360 (386)
T ss_pred HHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHhCCC-------------------
Confidence 3332 1111 123678999888854 7865 8999999999999852
Q ss_pred ccccCCCCCCcEEEEeccccccceeeeEe
Q 014349 394 PLTASKDMPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 394 ~~~~~~~~~~~~~l~~~~g~gG~~~~~vl 422 (426)
. .|..+.+.+|+++.|-. ..+++||
T Consensus 361 --~-~QV~~a~~gl~~~~Gg~-~~~~~~~ 385 (386)
T PRK07855 361 --V-NQVPGVENVLVTAGTGV-PTSGLIL 385 (386)
T ss_pred --c-ccCCCCcEEEEECCCCc-cceeEEe
Confidence 1 12234568888877633 3455665
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=180.23 Aligned_cols=266 Identities=17% Similarity=0.100 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++.|++ +++.+.+ +. .... .+.. ..+...+|
T Consensus 24 ~~el~~eA~~~Al~DAgl~~~dID-----~~~~~~~-~~------------------~~~~----~~~~---~~~~~~~G 72 (352)
T PRK07937 24 GVEMLMPCFAELYAELGITKSDIG-----FWCSGSS-DY------------------LAGR----AFSF---ISAIDSIG 72 (352)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcc-cc------------------cccc----ccch---hhHHhhcc
Confidence 468999999999999999998886 6654321 00 0000 0000 12345567
Q ss_pred CC-C-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-----------------hH-----HHHHHhhhhh
Q 014349 162 FQ-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-----------------AL-----SMAGFCKSRA 217 (426)
Q Consensus 162 l~-g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-----------------~~-----~~~~~~~~~~ 217 (426)
+. + |...+. ++|..||..|+.+|++|.+|+|||.|.|.+.. |. .+..+.....
T Consensus 73 ~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~y 149 (352)
T PRK07937 73 AVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAG 149 (352)
T ss_pred CCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHH
Confidence 63 3 455555 36888999999999999999999999986431 00 0000101111
Q ss_pred ccccc-----------------CCCCCCCCcccc--------------cCCCcceeccceEEEEecchHHHHhcCCeeeE
Q 014349 218 LTTKY-----------------NGTPQEASRPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYA 266 (426)
Q Consensus 218 l~~~~-----------------~~~~~~~~~pf~--------------~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a 266 (426)
+.... ..+|....+ +. ...+...++|||+|+||.+++.|++.+.++ +
T Consensus 150 m~~yG~t~e~lA~vavk~r~nA~~NP~A~~r-it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v 227 (352)
T PRK07937 150 LDAGKWTEEQMAEVAARSRADARRNPSAEPS-ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-A 227 (352)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHhhCchhhcc-CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-E
Confidence 11000 112222111 11 012233489999999999999999988777 9
Q ss_pred EEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHc-CCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC--Ccce
Q 014349 267 EVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS-GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS--GSLA 343 (426)
Q Consensus 267 ~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~a-gl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~--~~~~ 343 (426)
+|.|++...+.......+.. ...+++++++++ |++|+|||++|+| |++++..+...+..+ +.+|
T Consensus 228 ~I~g~~~~~~~~~~~~~d~~---~~~~~~~a~~~aAgi~~~diD~~Ei~----------D~F~~~~l~~~e~lGl~g~~p 294 (352)
T PRK07937 228 WITGIEHRIESPSLGARDLT---RSPSTALAAEAATGGDAGGVDVAELH----------APFTHQELILREALGLGDKTK 294 (352)
T ss_pred EEEEEEEeeCCccccccccc---cHHHHHHHHHHhcCCCHHHCCEEEEe----------CCChHHHHHHHHHcCCCCCCC
Confidence 99999887665432211111 134455666664 9999999999999 888888887665543 5688
Q ss_pred ecccccc-cchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEecccc--ccceeee
Q 014349 344 FSSTKGA-IGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGF--GGTNASL 420 (426)
Q Consensus 344 v~s~k~~-~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~--gG~~~~~ 420 (426)
+|...+. -||+.+|+|+.+++++++||+.+ ..+++|+++.|- +..++.+
T Consensus 295 vN~~GG~l~ghp~gatG~~~~~e~~~QL~g~----------------------------~a~~~l~~~~Gg~~~~~~~v~ 346 (352)
T PRK07937 295 VNPSGGALAANPMFAAGLERIGEAARHIWDG----------------------------SARRALAHATSGPALQQNLVA 346 (352)
T ss_pred cCCCccchhcCchhHHHHHHHHHHHHHHhcc----------------------------CCCEEEEecccccccceEEEE
Confidence 9888872 29999999999999999999874 146788887763 3566666
Q ss_pred Eeee
Q 014349 421 LFTK 424 (426)
Q Consensus 421 vl~~ 424 (426)
||++
T Consensus 347 v~~~ 350 (352)
T PRK07937 347 VLEG 350 (352)
T ss_pred EEec
Confidence 6664
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=181.11 Aligned_cols=250 Identities=15% Similarity=0.135 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 82 FIAYALCAADEALHDAKWL--PSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~--~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
...|+.+|+++||+|||++ +.+++ +++++...+. ..+..+..++..
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID-----~v~v~~~~~~---------------------------~~~~~~~~la~~ 74 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAID-----SVAVVNQLSW---------------------------RYRDPPGLLAER 74 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCC-----EEEEeccccc---------------------------cccCHHHHHHHH
Confidence 4679999999999999998 88887 7877653210 011223578899
Q ss_pred cCCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH----------------------------
Q 014349 160 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---------------------------- 210 (426)
Q Consensus 160 lgl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~---------------------------- 210 (426)
+|+.. +......++.++..+|..|++.|++|++|+|||+|+|.+.+.....
T Consensus 75 lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (498)
T PRK08257 75 LGADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMAS 154 (498)
T ss_pred cCCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccc
Confidence 99964 4445667888999999999999999999999999999753221000
Q ss_pred HHh-hhh-------------------------------hc----ccccCCCCCC--------------------CCcccc
Q 014349 211 GFC-KSR-------------------------------AL----TTKYNGTPQE--------------------ASRPFD 234 (426)
Q Consensus 211 ~~~-~~~-------------------------------~l----~~~~~~~~~~--------------------~~~pf~ 234 (426)
.+. ..+ .+ ......+|.. -+-||.
T Consensus 155 ~~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~ 234 (498)
T PRK08257 155 PAELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYT 234 (498)
T ss_pred hhhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCcc
Confidence 000 000 00 0000001110 112222
Q ss_pred cCCCcceeccceEEEEecchHHHHhcCC--eeeEEEEeEEEecCCCCCCC-CCC-ChHHHHHHHHHHHHHcCCCCCCccE
Q 014349 235 CGRDGFVIGEGSGVLVLEELEHAKKRGA--KIYAEVRGYGMSGDAHHITQ-PHI-DGKGAILAMTRALKQSGLQSHQVDY 310 (426)
Q Consensus 235 ~~~~G~~~geGa~alvL~~~~~A~~~g~--~~~a~i~g~~~~~d~~~~~~-~~~-~~~~~~~a~~~al~~agl~~~dId~ 310 (426)
.-......+||++++||.+++.|++.+. ...++|.|++..++...... ++. .......+.+++|++||++++|||+
T Consensus 235 ~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~ 314 (498)
T PRK08257 235 KLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDA 314 (498)
T ss_pred HhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCE
Confidence 2111223689999999999999998872 22478999988877543322 221 1233457999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhhcccCC----Ccceeccccc--ccchhHHhHHHHHHHHHHHHHHhC
Q 014349 311 VNAHATSTPLGDTVEATAIRTVFSDHATS----GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHG 373 (426)
Q Consensus 311 v~~hgtgt~~~D~~E~~a~~~~~~~~~~~----~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~ 373 (426)
+|+| +++++..+...+.++ +++|++...+ ..||+.+++|+.+++++++||+.+
T Consensus 315 ~ely----------dcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~ 373 (498)
T PRK08257 315 FDLY----------SCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN 373 (498)
T ss_pred EEec----------cCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc
Confidence 9999 665555554333221 2467887777 569999999999999999999863
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=167.53 Aligned_cols=247 Identities=19% Similarity=0.236 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .+++++..+. ...+..+.+|+..+
T Consensus 51 ~~~~la~~Aa~~aL~~ag~~~~dId-----~li~~~~~~~--------------------------~~~p~~a~~v~~~l 99 (329)
T PRK07204 51 TSSYMGAEAAKKAVEDAKLTLDDID-----CIICASGTIQ--------------------------QAIPCTASLIQEQL 99 (329)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC--------------------------CCCccHHHHHHHHh
Confidence 4578999999999999999988876 6777764321 11235567899999
Q ss_pred CCCC---CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 161 GFQG---PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 161 gl~g---p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
|+++ +++.+..+|+|++.||..|.++|++|.++.+||+++|.+.... .++...
T Consensus 100 gl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~------------------------~~~~~~ 155 (329)
T PRK07204 100 GLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGL------------------------NWGQNE 155 (329)
T ss_pred CCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCC------------------------CcccCc
Confidence 9974 8899999999999999999999999999999999999732211 122234
Q ss_pred CcceeccceEEEEecchHHHHhcCCeee-------------EEEEeEEEecCCCCCCCCC-------CCh--------HH
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIY-------------AEVRGYGMSGDAHHITQPH-------IDG--------KG 289 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~-------------a~i~g~~~~~d~~~~~~~~-------~~~--------~~ 289 (426)
.++++||||+|+||++.+.. .+++ ..+.+.+...+......+. .++ ..
T Consensus 156 ~~~lfGDGAaA~ll~~~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (329)
T PRK07204 156 SCILFGDGAAAVVITKGDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKY 231 (329)
T ss_pred ceEEEecccEEEEEEEcCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHH
Confidence 57889999999999975431 1221 1122111111100000000 011 12
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHH
Q 014349 290 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 369 (426)
Q Consensus 290 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 369 (426)
..++++++|+++|++++|||++..|..+.+. ..++.+.++... .+ +......+||+.+|+=.+.+...
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~~~~~-----~~~i~~~l~l~~--e~--~~~~~~~~Gn~~sas~~~~L~~~--- 299 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQASGPA-----MRLIRKKLGVDE--ER--FVTIFEDHGNMIAASIPVALFEA--- 299 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCCH--HH--hhhhHhhhCcHHHHHHHHHHHHH---
Confidence 3478999999999999999999999877654 334555554321 11 33566789999988766655543
Q ss_pred HHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 370 IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 370 l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
++.+.+ .+.+.++..+||.|-+-.+++|+
T Consensus 300 ~~~g~~-------------------------~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 300 IKQKKV-------------------------QRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred HHcCCC-------------------------CCCCEEEEEEEchhhhheeeEEe
Confidence 333332 23467778899999999888886
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-20 Score=161.08 Aligned_cols=273 Identities=21% Similarity=0.304 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCCC
Q 014349 84 AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQ 163 (426)
Q Consensus 84 ~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~ 163 (426)
.++.+|...||+|+++...+++ ..-+|-++|-+.-+ .|.-+.+|++
T Consensus 31 d~a~ea~tkal~da~ikys~vq-qa~vgyvfgdstcg---------------------------------qraiyevgmt 76 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGIKYSEVQ-QAVVGYVFGDSTCG---------------------------------QRAIYEVGMT 76 (408)
T ss_pred hHHHHHHHHHHHhcCCCHHHHH-hhhheeeecCCccc---------------------------------hHHHHhcccc
Confidence 4678899999999999876664 45566666654322 2344567889
Q ss_pred C-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH------------------------------HHHHH
Q 014349 164 G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL------------------------------SMAGF 212 (426)
Q Consensus 164 g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~------------------------------~~~~~ 212 (426)
| |.+.|.+.|+++..||-+|.+.|++|..|+||+.|.|.|..-. ....|
T Consensus 77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmf 156 (408)
T KOG1406|consen 77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMF 156 (408)
T ss_pred CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHh
Confidence 9 9999999999999999999999999999999999999753210 00001
Q ss_pred hhhh--hcccc-----------cCCCCCCCCcccccCCCcce---------------------eccceEEEEecchHHHH
Q 014349 213 CKSR--ALTTK-----------YNGTPQEASRPFDCGRDGFV---------------------IGEGSGVLVLEELEHAK 258 (426)
Q Consensus 213 ~~~~--~l~~~-----------~~~~~~~~~~pf~~~~~G~~---------------------~geGa~alvL~~~~~A~ 258 (426)
...+ .+... |.......-.||++-++-|. .+||+++.||.++...+
T Consensus 157 gnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~ 236 (408)
T KOG1406|consen 157 GNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVR 236 (408)
T ss_pred hhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHH
Confidence 0000 00000 00001112234443333332 79999999999988888
Q ss_pred hcCCeee-EEEEeEEEecCCCCCC-CCCC----ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHH
Q 014349 259 KRGAKIY-AEVRGYGMSGDAHHIT-QPHI----DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 332 (426)
Q Consensus 259 ~~g~~~~-a~i~g~~~~~d~~~~~-~~~~----~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~ 332 (426)
+.|.... .+|.|.-+.+|..+.. ..+. -....+.+.++.+++.|++|.||++||+| ++++-+++
T Consensus 237 k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielh----------dcfs~nel 306 (408)
T KOG1406|consen 237 KHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELH----------DCFSANEL 306 (408)
T ss_pred hcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEee----------cccchhhh
Confidence 8775433 3577776766643211 1000 01234678899999999999999999999 45544444
Q ss_pred hhcc-------------------cCCCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCC
Q 014349 333 FSDH-------------------ATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDN 391 (426)
Q Consensus 333 ~~~~-------------------~~~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~ 391 (426)
...+ ..+++.-|+.+.+ ..||++||+|+++.++.+.|||...
T Consensus 307 ityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg~a----------------- 369 (408)
T KOG1406|consen 307 ITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGLA----------------- 369 (408)
T ss_pred hhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhhhh-----------------
Confidence 3211 1235555666666 5699999999999999999998743
Q ss_pred CCccccCCCCCCcEEEEeccccccceeeeE
Q 014349 392 FMPLTASKDMPISAALSNSFGFGGTNASLL 421 (426)
Q Consensus 392 ~~~~~~~~~~~~~~~l~~~~g~gG~~~~~v 421 (426)
..+|....+.++-++.|.||..+..+
T Consensus 370 ----gkrqvpnakvalqhnlgiggavvv~l 395 (408)
T KOG1406|consen 370 ----GKRQVPNAKVALQHNLGIGGAVVVAL 395 (408)
T ss_pred ----ccccCCCchhhhhhccCcCceeEEEE
Confidence 23333345677778888888665544
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=162.13 Aligned_cols=245 Identities=22% Similarity=0.255 Sum_probs=163.4
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
-.....|+.+|+++||++||+++++++ -++++++.+. .+.+..|..|+.
T Consensus 49 ~e~~s~la~~Aa~~AL~~Agi~~~dID-----lII~aT~tpd--------------------------~~~Ps~A~~vq~ 97 (323)
T COG0332 49 DETTSDLAVEAARKALEDAGISPDDID-----LIIVATSTPD--------------------------HLFPSTACLVQA 97 (323)
T ss_pred CccHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCcc--------------------------cCCChHHHHHHH
Confidence 345678999999999999999999887 8888875422 234677889999
Q ss_pred HcCCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 159 KYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 159 ~lgl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
.||+++ +.+.+..+|++.+.||..|..+|++|.++.+||+|.|.++.... |..+.
T Consensus 98 ~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld------------------------~~dR~ 153 (323)
T COG0332 98 RLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILD------------------------WTDRD 153 (323)
T ss_pred HhCCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCC------------------------Hhhcc
Confidence 999988 99999999999999999999999999999999999998422211 33445
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCC---CC------C----------CCCh--------HHH
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHI---TQ------P----------HIDG--------KGA 290 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~---~~------~----------~~~~--------~~~ 290 (426)
..+++||||+|+||++.+ .+.+ |......+|+.+. .. . ...+ ..+
T Consensus 154 t~vlFgDGAgAvvl~~~~--~~~~------i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~ 225 (323)
T COG0332 154 TCVLFGDGAGAVVLEATE--DDNG------ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAM 225 (323)
T ss_pred ceEEEcCCceEEEEecCC--CCcC------eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHH
Confidence 788999999999999876 1111 2222222222110 00 0 0011 234
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHH
Q 014349 291 ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAI 370 (426)
Q Consensus 291 ~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 370 (426)
..+++++|++++++++|||++..|= .|-.+ ..++.+-++-. .=.+...-..+|++.+||=.+.|.++ +
T Consensus 226 ~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri-~~~i~~~l~~~----~~k~~~~~~~yGNtsaAsiplaL~~~---~ 293 (323)
T COG0332 226 PKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRI-IEAIAKKLGIP----EEKVVVTVDKYGNTSAASIPLALDEA---L 293 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEcccc----ccHHH-HHHHHHHcCCC----HHHHhhHHHHhcccccchHHHHHHHH---h
Confidence 5788999999999999999999992 11111 11222222211 01123334467888887765555443 3
Q ss_pred HhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 371 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 371 ~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
+.|.+ ++....+...||-|=+-.+++++
T Consensus 294 ~~g~i-------------------------k~Gd~ill~~fG~Gltwg~~~~r 321 (323)
T COG0332 294 REGRI-------------------------KPGDLVLLEAFGGGLTWGAALVR 321 (323)
T ss_pred hhCCC-------------------------CCCCEEEEEeecCcceeeeEEEE
Confidence 44443 12346666777766566666654
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.5e-18 Score=163.63 Aligned_cols=242 Identities=19% Similarity=0.200 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .++++++... ......+.+|+..+
T Consensus 51 ~~~~la~~A~~~al~~agl~~~~id-----~vi~~~~~~~--------------------------~~~~~~~~~i~~~l 99 (319)
T PRK09352 51 TTSDLATEAAKKALEAAGIDPEDID-----LIIVATTTPD--------------------------YAFPSTACLVQARL 99 (319)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCchHHHHHHHHh
Confidence 4678999999999999999888876 7888774311 00123457899999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|+++ +.+++..+|+|++.||..|+++|++|.+|.+||+++|.+.... .++....+
T Consensus 100 G~~~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------------~~~~~~~~ 155 (319)
T PRK09352 100 GAKNAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV------------------------DWTDRSTC 155 (319)
T ss_pred CCCCCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------------CcccCCce
Confidence 9987 8899999999999999999999999999999999999743211 01112346
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC---CCCCC-------------CCh--------HHHHHHHH
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQPH-------------IDG--------KGAILAMT 295 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~~~-------------~~~--------~~~~~a~~ 295 (426)
+++||||+|+||++.+.. . +.++...+++.+ ...|. ..+ ....++++
T Consensus 156 ~~~gDGaaA~ll~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 226 (319)
T PRK09352 156 VLFGDGAGAVVLGASEEP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAR 226 (319)
T ss_pred EEEeccceEEEEEEcCCC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHH
Confidence 789999999999986431 1 222222222211 00000 011 12346889
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCc
Q 014349 296 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 375 (426)
Q Consensus 296 ~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~ 375 (426)
++|+++|++++|||++..|..+... ...+.+.++-.. .+ +......+||+.+|+-++.+..++ +.+.+
T Consensus 227 ~~l~~~g~~~~di~~~~~h~~~~~~-----~~~~~~~lg~~~--~~--~~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~ 294 (319)
T PRK09352 227 EALEAAGLTPEDIDWLVPHQANLRI-----IDATAKKLGLPM--EK--VVVTVDKYGNTSAASIPLALDEAV---RDGRI 294 (319)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCCCH--HH--hhhhHHhhCCHHHHHHHHHHHHHH---HcCCC
Confidence 9999999999999999999654332 222333333221 11 223345799999998877776543 33321
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 376 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 376 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++.-+||.|-+-.+++|+
T Consensus 295 -------------------------~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 295 -------------------------KRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred -------------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 22456777899988888888876
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8e-19 Score=156.25 Aligned_cols=242 Identities=23% Similarity=0.345 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc-CC
Q 014349 84 AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY-GF 162 (426)
Q Consensus 84 ~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l-gl 162 (426)
.|...+.+..+++-+++|..+. -|++|+..... ......+++.++ |+
T Consensus 63 eLl~~vl~a~ie~t~~dp~~ig-----di~vG~vL~pg---------------------------~ga~e~R~a~~~ag~ 110 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIG-----DIVVGTVLAPG---------------------------SGASECRMAAFYAGF 110 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhc-----ceeeeeccCCC---------------------------cchHHHHHHHHHcCC
Confidence 4555677788899999877664 56777633211 113334454443 55
Q ss_pred C--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH--HH--------HHHh-------hhhhcc----
Q 014349 163 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL--SM--------AGFC-------KSRALT---- 219 (426)
Q Consensus 163 ~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~--~~--------~~~~-------~~~~l~---- 219 (426)
. -|..+|+.-|+||++|+..-+..|++|.+|+-|.+|+|+|.+.. .+ ..+. .+|..+
T Consensus 111 P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva 190 (435)
T KOG1389|consen 111 PETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVA 190 (435)
T ss_pred CcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHH
Confidence 3 48889999999999999999999999999999999999976542 00 0000 000000
Q ss_pred -----------------------ccc--------------CCCCC-----------CCCcc-------------cccCCC
Q 014349 220 -----------------------TKY--------------NGTPQ-----------EASRP-------------FDCGRD 238 (426)
Q Consensus 220 -----------------------~~~--------------~~~~~-----------~~~~p-------------f~~~~~ 238 (426)
... -.+|. +..|| |.++
T Consensus 191 ~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkd-- 268 (435)
T KOG1389|consen 191 ERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKD-- 268 (435)
T ss_pred HHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcC--
Confidence 000 00111 11222 2211
Q ss_pred cce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 014349 239 GFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYV 311 (426)
Q Consensus 239 G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v 311 (426)
|.. ++||+++++|.+...|.+.|.+++++.+.+.... ..|...+.+..-+|..+++.+|+..+|||++
T Consensus 269 GttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vG-----v~P~iMGiGPavAIp~alk~aGL~v~did~F 343 (435)
T KOG1389|consen 269 GTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVG-----VPPAIMGIGPAVAIPKALKAAGLEVDDIDLF 343 (435)
T ss_pred CccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeec-----CCHHHcCCCchhhhHHHHHHcCCccccccee
Confidence 222 8999999999999999999999999999887665 3566666677889999999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhhcccCCC---cceecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 312 NAHATSTPLGDTVEATAIRTVFSDHATSG---SLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 312 ~~hgtgt~~~D~~E~~a~~~~~~~~~~~~---~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
|++ |++|-+-+++.+.++. ++.++...-.+||++||+|+..++..+.-|++.-
T Consensus 344 EIN----------EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrg 399 (435)
T KOG1389|consen 344 EIN----------EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRG 399 (435)
T ss_pred ehh----------HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhc
Confidence 999 9999999998765332 2222323338899999999999999999998754
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-18 Score=147.86 Aligned_cols=246 Identities=27% Similarity=0.404 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|...|++.||..+++.++.++ .||+|+-..... +. -.++.++....|
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD-----~VI~GNV~aSSs-----------------Dg--------IYl~RHvGL~~G 77 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVD-----HVIMGNVLASSS-----------------DG--------IYLARHVGLRVG 77 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcc-----eEEEeeeeeccC-----------------Cc--------eEeeeccccccC
Confidence 456778899999999999887776 677765211100 00 011223333333
Q ss_pred C--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH---------------------HHHH----hh
Q 014349 162 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS---------------------MAGF----CK 214 (426)
Q Consensus 162 l--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~---------------------~~~~----~~ 214 (426)
+ .-|..+|+.-|.|+.++|-.+++.|.-|+++++|++|+|.|+..+. |..+ ..
T Consensus 78 vP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~k 157 (396)
T KOG1391|consen 78 VPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVK 157 (396)
T ss_pred CcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhh
Confidence 3 2388999999999999999999999999999999999998653210 0000 00
Q ss_pred --hh---------------------hcccc-c---------CC----------------CCCCCCcc-------------
Q 014349 215 --SR---------------------ALTTK-Y---------NG----------------TPQEASRP------------- 232 (426)
Q Consensus 215 --~~---------------------~l~~~-~---------~~----------------~~~~~~~p------------- 232 (426)
+. ..++. | ++ .-++..||
T Consensus 158 LpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppv 237 (396)
T KOG1391|consen 158 LPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPV 237 (396)
T ss_pred cchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCch
Confidence 00 00000 0 00 01122232
Q ss_pred cccCCCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 014349 233 FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQS 305 (426)
Q Consensus 233 f~~~~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~ 305 (426)
|. .+|.+ .+|||+++++.+++..++.+.+|+++|.+|.... ..|...+.+...+++.+|+++|++.
T Consensus 238 Fk--KdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vG-----cdP~IMGIGPvPAI~~vLKksGlkl 310 (396)
T KOG1391|consen 238 FK--KDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVG-----CDPSIMGIGPVPAISGVLKKSGLKL 310 (396)
T ss_pred hc--cCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeec-----cChhhccccCcHHHHHHHHHcCCcc
Confidence 21 23333 7899999999999999999999999999997765 4666667777889999999999999
Q ss_pred CCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCC---cceecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 306 HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG---SLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 306 ~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~---~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
.|||.+|++ |+++-+.+...+.++. ++.|+...-.+||+++|||..--...++-|+++.
T Consensus 311 ~DiDl~EvN----------EAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~ 372 (396)
T KOG1391|consen 311 KDIDLVEVN----------EAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRG 372 (396)
T ss_pred cccceEEec----------hhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcC
Confidence 999999999 9999888877665432 3344444448999999999998888888887643
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=157.32 Aligned_cols=243 Identities=19% Similarity=0.187 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++.+++ .+++++.... ......+.+++..+
T Consensus 50 ~~~~la~~A~~~al~~agl~~~~Id-----~~i~~~~~~~--------------------------~~~~~~a~~l~~~l 98 (318)
T TIGR00747 50 TSSTMGFEAAKRAIENAGISKDDID-----LIIVATTTPD--------------------------HAFPSAACMVQAYL 98 (318)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC--------------------------CCCChHHHHHHHHh
Confidence 3578999999999999999888776 7777764311 01123457899999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|+++ |.+.+..+|+|++.||..|+++|++|.++.+||+++|.+.... ++. .....
T Consensus 99 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~-----------------------~~~-~~~~~ 154 (318)
T TIGR00747 99 GIKGIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL-----------------------DWT-DRGTC 154 (318)
T ss_pred CCCCCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------------------CcC-CCCeE
Confidence 9998 8999999999999999999999999999999999999743221 011 12235
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC---CCCC-------CC--------------ChHHHHHHHH
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQP-------HI--------------DGKGAILAMT 295 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~~-------~~--------------~~~~~~~a~~ 295 (426)
+++||||+|+||++.+... . |.......++.. ...| .. ......++++
T Consensus 155 ~~~GDGAaA~lL~~~~~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
T TIGR00747 155 VLFGDGAGAVVLGESEDPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVE 226 (318)
T ss_pred EEEecceeEEEEeecCCCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHH
Confidence 6799999999998755321 1 222222222210 0000 00 0122346788
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCc
Q 014349 296 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 375 (426)
Q Consensus 296 ~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~ 375 (426)
++|+++|++++||+++.+|..+.+. ...+.+.++-.. .++. . .-..+||+.+|+-.+.|..++ +++.+
T Consensus 227 ~~l~~~g~~~~di~~~~~h~~~~~~-----~~~~~~~lgi~~--~k~~-~-~~~~~Gn~~sas~~~~L~~~~---~~~~~ 294 (318)
T TIGR00747 227 ETLEANGLDPEDIDWFVPHQANLRI-----IEALAKRLELDM--SQVV-K-TVHKYGNTSAASIPLALDELL---RTGRI 294 (318)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCCCH--HHee-e-hHhhhCCHHHHHHHHHHHHHH---HcCCC
Confidence 9999999999999999999765443 222334443321 1222 2 234599999998777775543 33332
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 376 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 376 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++.-++|-|-+..+++|+
T Consensus 295 -------------------------~~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 295 -------------------------KPGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred -------------------------CCCCEEEEEEEehhheeeEEEEE
Confidence 12356777799998888888876
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-16 Score=154.39 Aligned_cols=239 Identities=16% Similarity=0.142 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++.+++ .+++++..+. ...+..+..|...+|
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId-----~li~~s~~~~--------------------------~~~p~~a~~v~~~Lg 111 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE-----LLACGTSQPD--------------------------QLMPGHASMVHGELG 111 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEECCCC--------------------------cCChHHHHHHHhhCC
Confidence 578999999999999999988886 7788764321 111223467888999
Q ss_pred CCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhh-hhhcccccCCCCCCCCcccccCCCc
Q 014349 162 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK-SRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 162 l~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
++. +++.|..+|+|++.||..|.++|++|.++.+||+++|.++.......+.. .+.+.. .+...+++|+.+..+
T Consensus 112 l~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 187 (378)
T PRK06816 112 APPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAE----LEENPEIAFEKDFLR 187 (378)
T ss_pred CCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhc----CcccCCCCCCCCCCC
Confidence 876 88899999999999999999999999999999999998765544332321 223321 123467899999999
Q ss_pred ceeccceEEEEecchHHHHhcCCee--eEEEEe-EEEec-----CC-------CC--CC--CCC-----------CChH-
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKI--YAEVRG-YGMSG-----DA-------HH--IT--QPH-----------IDGK- 288 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~--~a~i~g-~~~~~-----d~-------~~--~~--~~~-----------~~~~- 288 (426)
+++||||+|+||++.+.. .|... .....+ ..... .+ .. .. .+. .++.
T Consensus 188 ~~fGDGA~A~vl~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (378)
T PRK06816 188 WMLSDGAGAVLLENKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRL 265 (378)
T ss_pred EeeecccEEEEEEecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHH
Confidence 999999999999865431 12111 000000 00000 00 00 00 000 0111
Q ss_pred -------HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh-----hcccCCCcceecccccccchhHH
Q 014349 289 -------GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVF-----SDHATSGSLAFSSTKGAIGHLLG 356 (426)
Q Consensus 289 -------~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~-----~~~~~~~~~~v~s~k~~~Gh~~~ 356 (426)
.....++++|+++|++++|||++..|-.+.+.. ..+.+.+ +-.. .++ ...-..+||+.+
T Consensus 266 ~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~-----~~v~~~l~~~~~gl~~--~k~--~~~~~~~GNt~s 336 (378)
T PRK06816 266 LNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFR-----EKIVELLAKAGFMIPE--EKW--FTNLATVGNTGS 336 (378)
T ss_pred HHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHH-----HHHHHHHHhccCCCCh--hhe--EEeccccccccc
Confidence 115678889999999999999999995443322 2223322 1110 112 233458999999
Q ss_pred hHHHHHHHHH
Q 014349 357 AAGAVEAIFA 366 (426)
Q Consensus 357 AsG~~~l~~~ 366 (426)
|+-.+.|..+
T Consensus 337 Asipi~L~~a 346 (378)
T PRK06816 337 ASIYIMLDEL 346 (378)
T ss_pred hHHHHHHHHH
Confidence 9877777554
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.8e-17 Score=156.56 Aligned_cols=241 Identities=20% Similarity=0.225 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++.+++ .+++++..+.. .....+.+++..+
T Consensus 49 ~~~~la~~A~~~al~~ag~~~~~Id-----~li~~~~~~~~--------------------------~~~~~~~~l~~~l 97 (320)
T cd00830 49 TTSDLAVEAAKKALEDAGIDADDID-----LIIVATSTPDY--------------------------LFPATACLVQARL 97 (320)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCCcHHHHHHHHh
Confidence 4578999999999999999888876 77777643210 0123567899999
Q ss_pred CCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++ .+.+.+..+|+|++.||..|.++|++|.++.+||+++|.+.... .|+....+
T Consensus 98 g~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------------~~~~~~~~ 153 (320)
T cd00830 98 GAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL------------------------DWTDRSTA 153 (320)
T ss_pred CCCCCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------------CcccCCce
Confidence 994 58899999999999999999999999999999999999743211 03334567
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-----CCC-----C----C-------CC--------hHHH
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----ITQ-----P----H-------ID--------GKGA 290 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-----~~~-----~----~-------~~--------~~~~ 290 (426)
+++||||+|+||++.+. +.. |.+....+++.. ... | . .. ....
T Consensus 154 ~~~GDgAaA~ll~~~~~----~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (320)
T cd00830 154 VLFGDGAGAVVLEATEE----DPG----ILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLM 225 (320)
T ss_pred EEEeccceEEEEEecCC----CCc----EEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhh
Confidence 89999999999997543 112 233333332211 000 0 0 00 1223
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHH
Q 014349 291 ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAI 370 (426)
Q Consensus 291 ~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 370 (426)
.++++++|+++|++++|||++.+|..+.+.. ..+.+.++-.. .++ ......+||+.+|+-.+.|..++
T Consensus 226 ~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~-----~~~~~~lgl~~--~~~--~~~~~~~Gn~~sas~~~~L~~~~--- 293 (320)
T cd00830 226 PESIEEALEKAGLTPDDIDWFVPHQANLRII-----EAVAKRLGLPE--EKV--VVNLDRYGNTSAASIPLALDEAI--- 293 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHHHH-----HHHHHHhCCCH--HHh--hhhHHhhCcHHHHHHHHHHHHHH---
Confidence 5788999999999999999999997665542 22444444321 112 23445799999998777776553
Q ss_pred HhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeE
Q 014349 371 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 421 (426)
Q Consensus 371 ~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~v 421 (426)
+.+.+ .+.+.++..++|.|-+..+++
T Consensus 294 ~~~~~-------------------------~~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 294 EEGKL-------------------------KKGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred HcCCC-------------------------CCCCEEEEEEEchHHhhHHhh
Confidence 33332 123566777888776655544
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-16 Score=153.90 Aligned_cols=243 Identities=20% Similarity=0.225 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .+++++.... ......+.+++..+
T Consensus 52 ~~~~la~~A~~~al~~ag~~~~~Id-----~li~~~~~~~--------------------------~~~~~~a~~l~~~l 100 (325)
T PRK12879 52 YTSDLAIKAAERALARAGLDAEDID-----LIIVATTTPD--------------------------YLFPSTASQVQARL 100 (325)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCChHHHHHHHHh
Confidence 3578999999999999999888776 7777764311 11223557899999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++. +.+.+..+|+|++.||..|.++|++|.++.+||+++|.+.... .++.....
T Consensus 101 g~~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~------------------------~~~~~~~~ 156 (325)
T PRK12879 101 GIPNAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVT------------------------DYTDRTTC 156 (325)
T ss_pred CCCCCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC------------------------CccccCce
Confidence 9974 8899999999999999999999999999999999999742211 01112345
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC----------CCCCC----------CCCh--------HHHH
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH----------HITQP----------HIDG--------KGAI 291 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~----------~~~~~----------~~~~--------~~~~ 291 (426)
+++||||+|+||++.+.. ..+ ......+++. ....+ ...+ ....
T Consensus 157 ~~~GDgAaA~ll~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (325)
T PRK12879 157 ILFGDGAGAVVLEATENE----PGF----IDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMP 228 (325)
T ss_pred EEEeecceEEEEEecCCC----CCe----EEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHH
Confidence 789999999999975531 111 1111111110 00000 0011 1234
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHH
Q 014349 292 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 371 (426)
Q Consensus 292 ~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 371 (426)
++++++|+++|++++|||++.+|..+.+. ...+.+.++-.. .++.. ....+||+.+|+-.+.+..+ ++
T Consensus 229 ~~i~~~L~~~g~~~~did~~~~h~~~~~~-----~~~~~~~lg~~~--~~~~~--~~~~~Gn~~sas~~~~L~~~---~~ 296 (325)
T PRK12879 229 KGARQVLEKAGLTKDDIDWVIPHQANLRI-----IESLCEKLGIPM--EKTLV--SVEYYGNTSAATIPLALDLA---LE 296 (325)
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCCCH--HHhhh--hHhhhCchHHHHHHHHHHHH---HH
Confidence 67899999999999999999999544332 334455544321 12222 45689999998877766544 33
Q ss_pred hCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 372 HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 372 ~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+ .+.+.++..+||.|-+-.++||+
T Consensus 297 ~g~~-------------------------~~Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 297 QGKI-------------------------KPGDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred cCCC-------------------------CCCCEEEEEEEchhhhhEEEEEE
Confidence 3331 12356777899998888888876
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=152.72 Aligned_cols=260 Identities=22% Similarity=0.208 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++++++ .|++++.... ......+..++..+|
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id-----~li~~s~~~~--------------------------~~~p~~a~~v~~~lg 109 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIG-----LLINTSVCRD--------------------------YLEPATACRVHHNLG 109 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCChHHHHHHHHcC
Confidence 568999999999999999888876 7777763211 122346678999999
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
++. +.+.|..+|+|++.||..|.++|++|.++.+||+++|....... ..+. .... +.....+|+.....
T Consensus 110 l~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~-~~~~--~~~~------~~~~~~~~~~~~~~ 180 (338)
T PRK09258 110 LPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVE-ATID--RLLA------PETTREDFAQSFAT 180 (338)
T ss_pred CCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhcc-chhh--hhcc------Cccchhhhhhccce
Confidence 963 78999999999999999999999999999999999997433211 0111 0001 11122457666778
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCC--CCCC-----CCh--------HHHHHHHHHHHHHcCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHI--TQPH-----IDG--------KGAILAMTRALKQSGLQ 304 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~--~~~~-----~~~--------~~~~~a~~~al~~agl~ 304 (426)
+.+||||+|+||++.+. ...+ ..+.+.....++.+. .... .++ .....+++++|+++|++
T Consensus 181 ~~~GDGA~A~ll~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~ 255 (338)
T PRK09258 181 LTLGSGAAAAVLTRGSL-HPRG----HRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWA 255 (338)
T ss_pred EEecccceEEEEecCCC-CCCc----ceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 89999999999997542 1111 133443333333221 1100 111 22335788999999999
Q ss_pred CCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCC
Q 014349 305 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 384 (426)
Q Consensus 305 ~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~ 384 (426)
++|||++.+|..+.+..+ .+.+.++-.. .+++. +. ..+||+.+|+=.+.|..+ ++.+.+
T Consensus 256 ~~did~~i~H~~~~~~~~-----~~~~~lgl~~--~k~~~-~~-~~~GN~~sas~~~~L~~~---~~~g~~--------- 314 (338)
T PRK09258 256 VEQVDRVICHQVGAAHTR-----AILKALGIDP--EKVFT-TF-PTLGNMGPASLPITLAMA---AEEGFL--------- 314 (338)
T ss_pred HHHCCEEecCCCCHHHHH-----HHHHHhCCCH--HHcee-hH-hhhCCcHHhHHHHHHHHH---HHhCCC---------
Confidence 999999999976655432 3444444321 12322 22 479999999866666554 233331
Q ss_pred CCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 385 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++..+||-|-+...++++
T Consensus 315 ----------------~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 315 ----------------KPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred ----------------CCCCEEEEEEechhHhhHhHeee
Confidence 12457777889887766666654
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-15 Score=146.48 Aligned_cols=243 Identities=19% Similarity=0.240 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ -++++++.+. .. . ..+..++..+
T Consensus 95 ~~~~La~~Aa~~aL~~agi~~~dId-----~li~~s~~~~----------------------~~---~--~~a~~v~~~L 142 (379)
T PLN02326 95 TLTSLAVEAAKKALEMAGVDPEDVD-----LVLLCTSSPD----------------------DL---F--GSAPQVQAAL 142 (379)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC----------------------cc---C--cHHHHHHHHh
Confidence 5679999999999999999887776 6777664211 00 0 1345799999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|+++ +++.+..+|+|++.||..|.++|++|.++.+||++.|.+.... .|+.....
T Consensus 143 G~~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~------------------------~~~d~~~~ 198 (379)
T PLN02326 143 GCTNALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYV------------------------DWTDRGTC 198 (379)
T ss_pred CCCCCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCC------------------------CccccCce
Confidence 9976 7889999999999999999999999999999999999732111 12223445
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-----------------------CCCC---------CCCh
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----------------------ITQP---------HIDG 287 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-----------------------~~~~---------~~~~ 287 (426)
+++||||+|+||++.+... ..+ .++...+++.+ ...+ ...+
T Consensus 199 ~lfGDGAaAvlL~~~~~~~---~~i----~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 271 (379)
T PLN02326 199 ILFGDGAGAVVLQACDDDE---DGL----LGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNG 271 (379)
T ss_pred EEEcceeEEEEEEEcCCCC---Cce----EEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecC
Confidence 6899999999999754221 111 11111111100 0000 0011
Q ss_pred --------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHH
Q 014349 288 --------KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359 (426)
Q Consensus 288 --------~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG 359 (426)
....++++++|+++|++++|||++..|-.+... ...+.+.++-.. .+++ .+ -..+||+.+|+=
T Consensus 272 ~~v~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~-----~~~~~~~Lgl~~--ek~~-~~-l~~~GNt~sAsi 342 (379)
T PLN02326 272 KEVFKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQRI-----IDAVAQRLGIPP--EKVI-SN-LANYGNTSAASI 342 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCCCH--HHee-ec-HhhcCcHHHHHH
Confidence 112357889999999999999999999554332 222344443221 1222 22 358999999987
Q ss_pred HHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 360 ~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.|..+ ++.+.+ .+.+.++..+||-|-+-.+++|+
T Consensus 343 ~~~L~~~---~~~g~~-------------------------~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 343 PLALDEA---VRSGKV-------------------------KKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred HHHHHHH---HHcCCC-------------------------CCCCEEEEEEEChhheeeEEEEE
Confidence 7666544 233321 23467778899988887888775
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.9e-15 Score=143.67 Aligned_cols=241 Identities=16% Similarity=0.222 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|+++++.... .+ ..+..++..+
T Consensus 50 ~~~~la~~A~~~aL~~ag~~~~dId-----~vi~~s~~~~~----------------------~~-----~~~~~v~~~L 97 (326)
T CHL00203 50 SLTKLAAEAANKALDKAHMDPLEID-----LIILATSTPDD----------------------LF-----GSASQLQAEI 97 (326)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC----------------------CC-----chHHHHHHHh
Confidence 3578999999999999999888887 77777643110 00 1134688889
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|+++ +++.+..+|+|++.||..|.++|++|.++.+||+++|.+.... +++.....
T Consensus 98 g~~~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~------------------------~~~~~~~~ 153 (326)
T CHL00203 98 GATRAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWI------------------------DWSDRKTC 153 (326)
T ss_pred CCCCCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcC------------------------CcccCCce
Confidence 9876 7889999999999999999999999999999999999742211 11222356
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-----C-------------CCCC-------CCh-------
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----I-------------TQPH-------IDG------- 287 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-----~-------------~~~~-------~~~------- 287 (426)
+++||||+|+||++.+. . . +.+....+++.. . ..|. ..+
T Consensus 154 ~~fgDga~A~ll~~~~~---~--~----~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 224 (326)
T CHL00203 154 ILFGDGAGAAIIGASYE---N--S----ILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFA 224 (326)
T ss_pred EEEcceeeEEEEEEcCC---C--C----eEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHH
Confidence 78999999999986432 1 1 112211111110 0 0010 001
Q ss_pred -HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHH
Q 014349 288 -KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 288 -~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
.....+++++|+++|++++|||++.+|-.+.+. ..++.+.++-.. .+++ ..-..+||+.+|+=.+.|..+
T Consensus 225 ~~~~~~~i~~~L~~~g~~~~did~~~~hq~~~~~-----~~~~~~~lgl~~--~k~~--~~l~~~Gn~~sasi~~~L~~~ 295 (326)
T CHL00203 225 VFQVPAVIIKCLNALNISIDEVDWFILHQANKRI-----LEAIANRLSVPN--SKMI--TNLEKYGNTSAASIPLALDEA 295 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCCCH--HHhh--hHHHhhCcHHHHHHHHHHHHH
Confidence 113356889999999999999999999555332 333444444321 1222 234589999998866666544
Q ss_pred HHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 367 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 367 ~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
++.+.+ .+.+.++..+||-|=+-.++|++
T Consensus 296 ---~~~g~~-------------------------~~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 296 ---IQNNKI-------------------------QPGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred ---HHhCCC-------------------------CCCCEEEEEEEchhhhheEEEEE
Confidence 344432 12456777788887776777765
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.4e-17 Score=157.18 Aligned_cols=206 Identities=28% Similarity=0.394 Sum_probs=132.9
Q ss_pred hHHHHHHHHHcCCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH-HH---H--------h--
Q 014349 150 NMASGHVSMKYGFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-AG---F--------C-- 213 (426)
Q Consensus 150 ~~~a~~i~~~lgl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~-~~---~--------~-- 213 (426)
..++..++...|+.. |.++|+.+|+||+.|+..|++.|++|.+|++|++|+|++++.... .. . .
T Consensus 67 ~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~ 146 (392)
T COG0183 67 QNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDP 146 (392)
T ss_pred ccHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccc
Confidence 356677889999986 999999999999999999999999999999999999997765420 00 0 0
Q ss_pred --------hhhhcc----cccC------------------CCC----------CC-CCccccc----CCCcceeccceEE
Q 014349 214 --------KSRALT----TKYN------------------GTP----------QE-ASRPFDC----GRDGFVIGEGSGV 248 (426)
Q Consensus 214 --------~~~~l~----~~~~------------------~~~----------~~-~~~pf~~----~~~G~~~geGa~a 248 (426)
.++..+ .+|+ ..| .. ...++.. ..+.....||+++
T Consensus 147 ~~~~~~~~~~g~~A~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~~eI~~~~v~~~~~~~dp~~r~d~~~~~dg~a~ 226 (392)
T COG0183 147 LGDATPGYLMGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVADPLRRLDCSPTSDGAAA 226 (392)
T ss_pred cccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCCCceeeEEecCCceecCCcccCCCCCChhhhcC
Confidence 000000 0000 000 00 0001111 1122245666666
Q ss_pred EEecchH--------------------------HHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 014349 249 LVLEELE--------------------------HAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSG 302 (426)
Q Consensus 249 lvL~~~~--------------------------~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~ag 302 (426)
+++...+ .+.+.+..+.+.++++.+.. ..|... .....+++++|+.++
T Consensus 227 l~~a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aG-----v~p~~~-~~~v~av~~~~~~~~ 300 (392)
T COG0183 227 LVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAG-----VDPSIM-DGPVAAVHDALTIAG 300 (392)
T ss_pred ceeccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhC-----CCcccc-cCCHHHHHHHHHHcC
Confidence 6665543 22233333333333322221 112110 222567899999999
Q ss_pred CC-CCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceeccccc--ccchhHHhHHHHHHHHHHHHHHh
Q 014349 303 LQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHH 372 (426)
Q Consensus 303 l~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~ 372 (426)
+. .+|||++|.+ |.++.......+.. +..|||...+ .+|||.||||+..++.++++|++
T Consensus 301 l~~~edlgl~e~n----------Eafa~~~~~~~~~~-G~~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~ 362 (392)
T COG0183 301 LLALEDLGLAEKG----------EAFAAVALGVTKIL-GDLPVNPSGGAIALGHPIGATGARILVELARQLRG 362 (392)
T ss_pred CchhhhcCceecC----------hHHHHHHHhhHHhc-CCceeCCCcchhhcCCCccchHHHHHHHHHHHHhh
Confidence 99 9999999999 99998887654433 3478887777 77999999999999999999998
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.7e-15 Score=143.85 Aligned_cols=244 Identities=16% Similarity=0.149 Sum_probs=155.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
.....|+.+|+++||+++|+++++++ .+++.++.. +.......+.+++..
T Consensus 51 ~~~~~la~~Aa~~aL~~ag~~~~dId-----~li~~~~~~-------------------------~~~~~p~~a~~l~~~ 100 (339)
T PRK06840 51 DHTSDMAIAAAKPALKQAGVDPAAID-----VVIYIGSEH-------------------------KDYPVWSSAPKIQHE 100 (339)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCC-------------------------CCCCCCchHHHHHHH
Confidence 34678999999999999999888776 665443211 011112335679999
Q ss_pred cCCCC-CeeeccCCcchHHHHHHHHHHHHHc-CCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 160 YGFQG-PNHAAVTACATGAHSIGDAARMIQF-GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 160 lgl~g-p~~~v~~acas~~~Al~~A~~~I~~-G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
+|++. +.+.+..+|++++.||..|.++|++ |.++.+||++.|...... .|+...
T Consensus 101 lGl~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~------------------------~~~~~~ 156 (339)
T PRK06840 101 IGAKNAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLV------------------------DYDNPR 156 (339)
T ss_pred hCCCCcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccccccc------------------------CcCCCC
Confidence 99975 7888999999999999999999999 999999999988632110 011112
Q ss_pred Ccc--eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-------------CCCCC-------------CC---
Q 014349 238 DGF--VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-------------ITQPH-------------ID--- 286 (426)
Q Consensus 238 ~G~--~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-------------~~~~~-------------~~--- 286 (426)
..+ .+||||+|+||++.+. +.. |.+....+++.. ...+. +.
T Consensus 157 ~~~~~~~GDgAaA~ll~~~~~----~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (339)
T PRK06840 157 TRFMFNFAAGGSAALLKKDAG----KNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMK 228 (339)
T ss_pred eeeeccCCCceeEEEEEecCC----CCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHH
Confidence 232 3699999999986432 112 222222222110 00000 00
Q ss_pred -------hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHH
Q 014349 287 -------GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359 (426)
Q Consensus 287 -------~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG 359 (426)
.....++++++|+++|++++|||++.+|-.+.+. ...+.+.++-.. .+.. ....+||+.+|+-
T Consensus 229 ~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl~~--~~~~---~~~~~Gn~~sas~ 298 (339)
T PRK06840 229 ERLDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSA-----HIALLEGLGLTE--EQAI---YLDEYGHLGQLDQ 298 (339)
T ss_pred HHhHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHHH-----HHHHHHHcCCCH--HHeE---eHHhccchhhhhH
Confidence 0123478899999999999999999888433222 122333333221 1121 2458999998887
Q ss_pred HHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 360 ~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.|..+ ++.+.+ .+...++..+||.|.+-.+++|+
T Consensus 299 ~~~L~~~---~~~~~~-------------------------~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 299 ILSLHLA---LEQGKL-------------------------KDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred HHHHHHH---HHcCCC-------------------------CCCCEEEEEEEehhhheeEEEEE
Confidence 6666543 233321 12456777899999998888886
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=139.66 Aligned_cols=240 Identities=19% Similarity=0.202 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+++|+++||+++|+++++++ .+++++..+. ...+..+..+...+
T Consensus 49 ~~~~la~~Aa~~aL~~agl~~~dID-----~li~~s~~~~--------------------------~~~p~~a~~v~~~L 97 (345)
T TIGR00748 49 DTATIGVEAARNALKRAKIDPKDIG-----AVYVGSESHP--------------------------YAVKPTATIVAEAI 97 (345)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC--------------------------ccccchHHHHHHHc
Confidence 4578999999999999999988887 7777764321 11122355788999
Q ss_pred CCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|++. +.+.+..+|+++..||..|..+|++|.++.+||++.|.+... |. +..
T Consensus 98 Gl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~-------------------~~--------~~~ 150 (345)
T TIGR00748 98 GATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQGA-------------------PG--------DAL 150 (345)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecccC-------------------CC--------ccC
Confidence 9863 788999999999999999999999999999999999974210 11 111
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEE-EecCCCC-C---CC--C------CC---ChHHHHHHHHHHHHHcC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG-MSGDAHH-I---TQ--P------HI---DGKGAILAMTRALKQSG 302 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~-~~~d~~~-~---~~--~------~~---~~~~~~~a~~~al~~ag 302 (426)
-+..||||+|+||++.+.. ..+.+.. ...++.. . .. + .. .......+++++|+++|
T Consensus 151 ~~~~GDGAaA~vl~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 222 (345)
T TIGR00748 151 EYTAGAGGAAYIIGEKNTV--------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLG 222 (345)
T ss_pred cccCCCceEEEEEccCCcc--------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcC
Confidence 2457999999999864311 1222211 1111110 0 00 1 00 01223367889999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCC
Q 014349 303 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 382 (426)
Q Consensus 303 l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~ 382 (426)
++++|||++.+|-.+.+. ...+.+.++-.. .+++.+-.-..+||+.+|+=.+.|...+. .+
T Consensus 223 l~~~did~~i~Hq~~~~~-----~~~~~~~lgl~~--ek~~~~~~~~~~GNt~sAsipl~L~~~~~-----~~------- 283 (345)
T TIGR00748 223 LTPEDFDYAVFHQPNGKF-----YLVAARMLGFPK--EQVKPGLLTPRIGNTYSGATPVGLSAVLD-----IA------- 283 (345)
T ss_pred CCHHHcCEEEeCCCChHH-----HHHHHHHcCCCH--HHeeccccccccCchhhhHHHHHHHHHHH-----hc-------
Confidence 999999999999443221 222334333211 12222112257999999987777765531 11
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 383 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++..+||-|-+..+++++
T Consensus 284 ------------------~~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 284 ------------------EPGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred ------------------CCCCEEEEEEecCCcceeEEEEE
Confidence 12346777788888888888774
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.2e-15 Score=140.71 Aligned_cols=243 Identities=16% Similarity=0.141 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ -++++++.+. ...+..+.+|+..|
T Consensus 51 ~~~~la~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~d--------------------------~~~p~~a~~v~~~L 99 (326)
T PRK05963 51 TLSDLAASAGDMALSDAGIERSDIA-----LTLLATSTPD--------------------------HLLPPSAPLLAHRL 99 (326)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC--------------------------CCCCcHHHHHHHHh
Confidence 3578999999999999999888886 7777774321 12234566899999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++. +++.+..+|++++.||..|..+|++|. +.+||+++|.+... +. .+.....
T Consensus 100 g~~~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~~-----------~~-------------~~~~~~~ 154 (326)
T PRK05963 100 GLQNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANILSRR-----------IN-------------MAERASA 154 (326)
T ss_pred CCCCCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhcc-----------CC-------------ccccCce
Confidence 9965 889999999999999999999999985 89999999863210 00 1112346
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC----------CCCC--------C-----CCh--------H
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH----------ITQP--------H-----IDG--------K 288 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~----------~~~~--------~-----~~~--------~ 288 (426)
+++||||+|+||++.+.. ...+ .+....+++.. ...| . .++ .
T Consensus 155 ~lfGDgA~A~ll~~~~~~---~~~~----l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (326)
T PRK05963 155 VLFADAAGAVVLAPSAKA---NSGV----LGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVR 227 (326)
T ss_pred EEEeecceEEEEEecCCC---CCce----EEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHH
Confidence 789999999999864421 0111 11111111110 0000 0 011 1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHH
Q 014349 289 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 368 (426)
Q Consensus 289 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~ 368 (426)
.+.++++++|+++|++++|||++..|-.+.. -...+.+.++-.. .++ ...-..+||+.+|+=.+.|-.
T Consensus 228 ~~~~~~~~~L~~~gl~~~did~~~~h~~~~~-----~~~~~~~~l~l~~--~k~--~~~l~~~Gn~~sas~~~~L~~--- 295 (326)
T PRK05963 228 MMSGASQNVLASAAMTPQDIDRFFPHQANAR-----IVDKVCETIGIPR--AKA--ASTLETYGNSSAATIPLSLSL--- 295 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH-----HHHHHHHHcCCCH--HHh--hhhHHhhCcHHHHHHHHHHHH---
Confidence 2346788999999999999999999944322 2222333333211 111 123358899977775555432
Q ss_pred HHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 369 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 369 ~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.++.+.+ .+.+.++..+||.|-+-.++||+
T Consensus 296 ~~~~~~~-------------------------~~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 296 ANLEQPL-------------------------REGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred HHHhCCC-------------------------CCCCEEEEEEEehhhhheeeEEe
Confidence 2333221 12467788899998888888875
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.2e-15 Score=140.32 Aligned_cols=243 Identities=16% Similarity=0.144 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++..... .....+.+++..+
T Consensus 47 ~~~~l~~~a~~~aL~~ag~~~~~Id-----~li~~~~~~~~--------------------------~~~~~~~~i~~~l 95 (324)
T cd00827 47 DVPTMAVEAARRALERAGIDPDDIG-----LLIVATESPID--------------------------KGKSAATYLAELL 95 (324)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCccHHHHHHHHc
Confidence 3578999999999999999988887 78887643210 0123557799999
Q ss_pred CCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++ .+.+++..+|+|++.||..|.++|++|.++.+||+++|.+.... ......+
T Consensus 96 g~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~-------------------------~~~~~~~ 150 (324)
T cd00827 96 GLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL-------------------------DEGSALE 150 (324)
T ss_pred CCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc-------------------------cCCCCcc
Confidence 995 58999999999999999999999999999999999999743221 1234578
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC---------CCC-------------CC-----C---ChHH
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---------ITQ-------------PH-----I---DGKG 289 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---------~~~-------------~~-----~---~~~~ 289 (426)
+++||||+|+||++.+... +.. |......+++.. ... .+ . ....
T Consensus 151 ~~~gdgaaA~ll~~~~~~~--~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (324)
T cd00827 151 PTLGDGAAAMLVSRNPGIL--AAG----IVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKL 224 (324)
T ss_pred ccccCceEEEEEecCcccc--cCC----ceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHH
Confidence 8999999999999765420 111 222111111110 000 00 0 0133
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCC-CCCCHHHHHHHHHHhhcccCCCcceec--ccccccchhHHhHHHHHHHHH
Q 014349 290 AILAMTRALKQSGLQSHQVDYVNAHATST-PLGDTVEATAIRTVFSDHATSGSLAFS--STKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 290 ~~~a~~~al~~agl~~~dId~v~~hgtgt-~~~D~~E~~a~~~~~~~~~~~~~~~v~--s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
...+++++|++++++ +||+++..|-.+. .. ...+.+.++... .++... .....+||+.+|+-.+.+..+
T Consensus 225 ~~~~~~~~l~~~~~~-~~i~~~~~h~~~~~~~-----~~~~~~~l~~~~--~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~ 296 (324)
T cd00827 225 IAKVVRKALDRAGLS-EDIDYFVPHQPNGKKI-----LEAVAKKLGGPP--EKASQTRWILLRRVGNMYAASILLGLASL 296 (324)
T ss_pred HHHHHHHHHHHcccc-cccceeeccCchHHHH-----HHHHHHHccchH--hhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence 456788999999999 9999999995443 11 111222222110 012222 245688999988866666544
Q ss_pred HHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeE
Q 014349 367 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 421 (426)
Q Consensus 367 ~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~v 421 (426)
++.+.+ .+.+.++.-++|.|-...+++
T Consensus 297 ---~~~~~~-------------------------~~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 297 ---LESGKL-------------------------KAGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred ---HhcCCC-------------------------CCCCEEEEEEeccchhheecc
Confidence 333321 134577777888877665554
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.2e-14 Score=135.08 Aligned_cols=240 Identities=18% Similarity=0.206 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++.+++ .+++++..+.. .....+.+++..+
T Consensus 50 ~~~~la~~Aa~~aL~~ag~~~~dId-----~li~~s~~~~~--------------------------~~p~~a~~v~~~L 98 (347)
T PRK04262 50 DTATIAVEAARNALKRAGIDPKEIG-----AVYVGSESHPY--------------------------AVKPTATIVAEAL 98 (347)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCc--------------------------ccccHHHHHHHHc
Confidence 4578999999999999999988887 77777643211 1112345788999
Q ss_pred CCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|++. +.+.+..+|++++.+|..|..+|++|.++.+||++.|.... . |.. ..
T Consensus 99 gl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~------~~~--------~~ 151 (347)
T PRK04262 99 GATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------A------PGD--------AL 151 (347)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------C------CCC--------CC
Confidence 9964 67889999999999999999999999999999999996210 0 111 11
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEE-EecCCCCC-C-----CCC----C-----ChHHHHHHHHHHHHHcC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG-MSGDAHHI-T-----QPH----I-----DGKGAILAMTRALKQSG 302 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~-~~~d~~~~-~-----~~~----~-----~~~~~~~a~~~al~~ag 302 (426)
-+..||||+|+||++.+. ..+|.+.. ...+.... . .+. . .......+++++|+++|
T Consensus 152 ~~~~GDGA~A~ll~~~~~--------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g 223 (347)
T PRK04262 152 EYTAAAGGAAFIIGKEEV--------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLG 223 (347)
T ss_pred CCcCCCCcEEEEEecCcc--------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhC
Confidence 133599999999986321 12233321 11121110 0 010 0 01245578899999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCC
Q 014349 303 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 382 (426)
Q Consensus 303 l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~ 382 (426)
++++|||++.+|-.+....+ .+.+.++-.. .++..+..-..+||+.+|+=.+.|..++. . +
T Consensus 224 l~~~dId~~v~Hq~n~~~~~-----~~~~~Lgl~~--ek~~~~~~~~~~GNt~sAsi~~~L~~~~~----~-~------- 284 (347)
T PRK04262 224 LKPSDYDYAVFHQPNGKFPL-----RVAKMLGFTK--EQVKPGLLTPYIGNTYSGSALLGLAAVLD----V-A------- 284 (347)
T ss_pred cCHHHhceeecCCCchHHHH-----HHHHHcCCCH--HHhhccchhhhhCChHHHHHHHHHHHHHH----h-C-------
Confidence 99999999999944433322 2233333211 12322223478999999987777655431 1 1
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 383 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+...++..+||-|-+...++++
T Consensus 285 ------------------~~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 285 ------------------KPGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred ------------------CCCCEEEEEecCCCcceeeEEEE
Confidence 01346777788887776666664
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.4e-15 Score=131.29 Aligned_cols=269 Identities=20% Similarity=0.265 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCC
Q 014349 83 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 162 (426)
Q Consensus 83 ~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl 162 (426)
..|+.++....|+.-.++...++ -+++|+-. +..-.+.++...+..-|+
T Consensus 67 hdlar~al~~ll~kt~lpke~~d-----yii~gtvi--------------------------qevktsniareaal~agf 115 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLD-----YIICGTVI--------------------------QEVKTSNIAREAALLAGF 115 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhc-----eeeehhhH--------------------------HHHhcchHHHHHHHhcCC
Confidence 35666677777777777554444 56677621 111123445555555666
Q ss_pred C--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhh------------------------hh
Q 014349 163 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK------------------------SR 216 (426)
Q Consensus 163 ~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~------------------------~~ 216 (426)
. -|..+|..+|-|+.+|+..++.+|..|.||++++||+|.+++...-..-.. ..
T Consensus 116 sdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~n 195 (465)
T KOG1392|consen 116 SDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKN 195 (465)
T ss_pred CCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhh
Confidence 4 499999999999999999999999999999999999998765431110000 00
Q ss_pred hccccc-----------------------------CC------------------------------CC----CC-----
Q 014349 217 ALTTKY-----------------------------NG------------------------------TP----QE----- 228 (426)
Q Consensus 217 ~l~~~~-----------------------------~~------------------------------~~----~~----- 228 (426)
.+++.. .+ ++ +.
T Consensus 196 flapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvs 275 (465)
T KOG1392|consen 196 FLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVS 275 (465)
T ss_pred ccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccC
Confidence 000000 00 00 00
Q ss_pred -----------CCccccc--CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEE-ecCCCCCCCCCCChHHHHHHH
Q 014349 229 -----------ASRPFDC--GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM-SGDAHHITQPHIDGKGAILAM 294 (426)
Q Consensus 229 -----------~~~pf~~--~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~-~~d~~~~~~~~~~~~~~~~a~ 294 (426)
-.+||.. .++.-.+.|||.+.++..+|.|.+.|.+|.+.++.+-. ++|...... .+....+
T Consensus 276 sle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqll-----lgpay~i 350 (465)
T KOG1392|consen 276 SLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLL-----LGPAYVI 350 (465)
T ss_pred CHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhhee-----ccccccc
Confidence 0111110 12222389999999999999999999999999988754 444432111 1224568
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHh----------hccc-----CCCccee-----cccccccchh
Q 014349 295 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVF----------SDHA-----TSGSLAF-----SSTKGAIGHL 354 (426)
Q Consensus 295 ~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~----------~~~~-----~~~~~~v-----~s~k~~~Gh~ 354 (426)
-+.|++||++..|||.+|+| |+++-+-+. +.+- .-+.+|+ +...-.+||+
T Consensus 351 pkll~kagltlkdid~feih----------eafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighp 420 (465)
T KOG1392|consen 351 PKLLDKAGLTLKDIDVFEIH----------EAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHP 420 (465)
T ss_pred HHHHHHcCCcccccchhhhH----------HHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCc
Confidence 89999999999999999999 888754442 2111 1122333 2222389999
Q ss_pred HHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 355 LGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 355 ~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+||+|..-...+..-|++. ..+++++-+...||+...+++++|
T Consensus 421 fgatgvrl~mh~anrl~~e----------------------------~gqygvvaacaaggqgvamlieay 463 (465)
T KOG1392|consen 421 FGATGVRLAMHSANRLKEE----------------------------KGQYGVVAACAAGGQGVAMLIEAY 463 (465)
T ss_pred ccccchhhHHHHHhHHHhh----------------------------cCceeEeehhhcCCcceEEEeecc
Confidence 9999998777776665542 256888999999999999999986
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.4e-14 Score=135.16 Aligned_cols=260 Identities=15% Similarity=0.127 Sum_probs=161.5
Q ss_pred hhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHH
Q 014349 75 DHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASG 154 (426)
Q Consensus 75 ~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 154 (426)
..........|+.+|+++||+++|+++++++ .++++++.+ ...+..+.
T Consensus 78 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id-----~li~~s~~~---------------------------~~~P~~a~ 125 (361)
T cd00831 78 NDIALEEARELAEEAARGALDEAGLRPSDID-----HLVVNTSTG---------------------------NPTPSLDA 125 (361)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEECCCC---------------------------CCCCCHHH
Confidence 3334445678999999999999999988886 777776431 12235566
Q ss_pred HHHHHcCCCC--Ceeecc-CCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCc
Q 014349 155 HVSMKYGFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 231 (426)
Q Consensus 155 ~i~~~lgl~g--p~~~v~-~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (426)
+|...+|++. +++.|. .+|++++.||..|..+|++|..+.+||+++|.++.... +..
T Consensus 126 ~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~~~-----------------~~d--- 185 (361)
T cd00831 126 MLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWYR-----------------GPD--- 185 (361)
T ss_pred HHHHHhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccceeC-----------------CCC---
Confidence 8999999974 678898 89999999999999999999999999999997432110 000
Q ss_pred ccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEe--------------cCCCCCC-CC---CCChHHHHHH
Q 014349 232 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--------------GDAHHIT-QP---HIDGKGAILA 293 (426)
Q Consensus 232 pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~--------------~d~~~~~-~~---~~~~~~~~~a 293 (426)
..+..-..+++||||+|+||++.+..... ......+.+.... ..+.+.. .+ ........++
T Consensus 186 ~~~~~~~~~lfGDgaaA~ll~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 264 (361)
T cd00831 186 HRSMLVGNALFGDGAAAVLLSNDPRDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERV 264 (361)
T ss_pred cHHHhhhhhhccCCceEEEEEcCCCcccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHH
Confidence 00000135778999999999976542110 0111122221110 0000000 00 0111244567
Q ss_pred HHHHHHHc--CCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCccee-cccccccchhHHhHHHHHHHHHHHHH
Q 014349 294 MTRALKQS--GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF-SSTKGAIGHLLGAAGAVEAIFAVLAI 370 (426)
Q Consensus 294 ~~~al~~a--gl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v-~s~k~~~Gh~~~AsG~~~l~~~~~~l 370 (426)
++++|+++ |++++|||++.+|-.+.+. ...+.+.++-.. .++.. ...-..+||+.+|+=.+.|..+ +
T Consensus 265 i~~~L~~~~~g~~~~did~~~~H~~~~~i-----~~~v~~~lgl~~--~~~~~s~~~l~~~GN~~sasi~~~L~~~---~ 334 (361)
T cd00831 265 LRKLLARLGIGLFKLAFDHWCVHPGGRAV-----LDAVEKALGLSP--EDLEASRMVLRRYGNMSSSSVLYVLAYM---E 334 (361)
T ss_pred HHHHhccccCCCccccceEEEECCCChHH-----HHHHHHHcCCCH--HHHHHHHHHHHHhCCchhccHHHHHHHH---H
Confidence 89999999 9999999999999654432 223444443221 11211 1334588999998866666554 3
Q ss_pred HhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEe
Q 014349 371 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 371 ~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl 422 (426)
+++.+ .+.+.++..+||.|=+..++++
T Consensus 335 ~~g~~-------------------------~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 335 AKGRV-------------------------KRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HhCCC-------------------------CCCCEEEEEEEcCCceeeeeeC
Confidence 33332 1235677778888766665553
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=5e-13 Score=128.97 Aligned_cols=215 Identities=10% Similarity=0.044 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .+++++..+ ....+..+.+|+..|
T Consensus 59 ~~~~la~~Aa~~aL~~a~~~~~dId-----~lI~~t~t~--------------------------d~~~P~~a~~v~~~L 107 (353)
T PRK12880 59 CVSDLGKHAANTLLQGLNIDKNSLD-----ALIVVTQSP--------------------------DFFMPSTACYLHQLL 107 (353)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCC--------------------------CCCCCcHHHHHHHHh
Confidence 4678999999999999999988887 777777432 233456788999999
Q ss_pred CCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|++. +++.|..+|++++.+|..|..+|++|..+ +||+++|.++... . ++....
T Consensus 108 g~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~~-----------------------~-~~d~~~ 162 (353)
T PRK12880 108 NLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKFI-----------------------H-PKNMNL 162 (353)
T ss_pred CCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhccC-----------------------C-cccCCc
Confidence 9963 67899999999999999999999999999 8888888632111 0 111223
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEec------CCCC--CCC----------C---------CCCh----
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG------DAHH--ITQ----------P---------HIDG---- 287 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~------d~~~--~~~----------~---------~~~~---- 287 (426)
..++||||+|+||++.+... + . ..+...+... .+.+ ... + ..++
T Consensus 163 ~~lFGDGAaA~vl~~~~~~~--~--~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 237 (353)
T PRK12880 163 APIFGDGVSATLIEKTDFNE--A--F-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIF 237 (353)
T ss_pred eeeecccceEEEEEecCCCC--c--e-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHH
Confidence 56799999999998643211 1 1 1111111000 0000 000 0 0011
Q ss_pred ----HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHH
Q 014349 288 ----KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEA 363 (426)
Q Consensus 288 ----~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l 363 (426)
.....+++++|+++|++++|||++.+|-.+ ..-...+.+-++-.. .+++ ..+-..+|++.+||=.+.+
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~-----~~i~~~i~~~Lgl~~--ek~~-~~~l~~~GNtssasip~~L 309 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQSN-----AYLVDCIKEELKLND--DKVP-NFIMEKYANLSACSLPALL 309 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCCCH--HHhh-hhhHHhhCCHHHHHHHHHH
Confidence 112357889999999999999999999433 223444555444321 1221 1223568888877655444
Q ss_pred H
Q 014349 364 I 364 (426)
Q Consensus 364 ~ 364 (426)
-
T Consensus 310 ~ 310 (353)
T PRK12880 310 C 310 (353)
T ss_pred H
Confidence 3
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.3e-13 Score=123.55 Aligned_cols=186 Identities=19% Similarity=0.222 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||++||+++++++ .+++|+.. + ....+..++..+|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID-----~IIvGdl~---------------------------~--Q~~~As~vA~~LG 95 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD-----FFLAGDLL---------------------------N--QIITANFVARDLG 95 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeCCC---------------------------C--cccHHHHHHHHhC
Confidence 467999999999999999988887 77776521 0 0124567888888
Q ss_pred CCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCccc--ccCCCc
Q 014349 162 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPF--DCGRDG 239 (426)
Q Consensus 162 l~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf--~~~~~G 239 (426)
+ |.+.|.++|+|++.||..|..+|++|.+|.|||++.+...+..... +. | ..| .++...
T Consensus 96 I--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqf-----r~--------p----~eyg~q~~~ta 156 (327)
T TIGR02845 96 I--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQF-----RY--------P----TEYGVQKPPTA 156 (327)
T ss_pred C--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhc-----cc--------c----cccccCCCCee
Confidence 7 8899999999999999999999999999999999998754332110 00 0 012 234456
Q ss_pred ceeccceEEEEecchHHHHhcCCeee----EEEEeEEEecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEE
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIY----AEVRGYGMSGDAHHITQPHIDG----KGAILAMTRALKQSGLQSHQVDYV 311 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~----a~i~g~~~~~d~~~~~~~~~~~----~~~~~a~~~al~~agl~~~dId~v 311 (426)
..+++||+|+||++.+ .+.++- ++|..++. ..|...+ .+...++.+-|++.|.+|+|-|.|
T Consensus 157 ~~tgdGAGA~vl~~~~----~~~~i~~~t~gkv~d~g~-------~d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i 225 (327)
T TIGR02845 157 QWTVTGAGAVLLASTG----GGPRITSATIGKVVDYGI-------TDPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLI 225 (327)
T ss_pred eEEEcccEEEEEeecC----CCCceEEEEEEEEEecCC-------CCcccchhhhhHHHHHHHHHHHHHcCCChhhccEE
Confidence 7799999999998753 122221 33444433 2333222 345678899999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhhcc
Q 014349 312 NAHATSTPLGDTVEATAIRTVFSDH 336 (426)
Q Consensus 312 ~~hgtgt~~~D~~E~~a~~~~~~~~ 336 (426)
..-..|.. -..-+.+++..+
T Consensus 226 ~tgdlg~v-----g~~i~~~ll~~~ 245 (327)
T TIGR02845 226 VTGDLARV-----GSEILRKLLKER 245 (327)
T ss_pred EecchHHH-----HHHHHHHHHHHc
Confidence 98643321 223455665443
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-12 Score=125.53 Aligned_cols=270 Identities=12% Similarity=0.103 Sum_probs=162.8
Q ss_pred hhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHH
Q 014349 74 KDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMAS 153 (426)
Q Consensus 74 ~~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (426)
+......-...|+.+|+++||+++|+++++++ .+++.++.+. . .+..+
T Consensus 94 r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId-----~ii~~t~t~~----------------------~-----~P~~a 141 (393)
T PLN03172 94 RQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-----HLVFCTTSGV----------------------D-----MPGAD 141 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC----------------------c-----CchHH
Confidence 33344445568999999999999999888776 6777764321 1 23567
Q ss_pred HHHHHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCC
Q 014349 154 GHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 230 (426)
Q Consensus 154 ~~i~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (426)
.+|...||++.- .+.+..+|++++.+|..|..+++++..+.+||+++|.++..+. . +..
T Consensus 142 ~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~----------~------~~d-- 203 (393)
T PLN03172 142 YQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFR----------G------PSD-- 203 (393)
T ss_pred HHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhc----------c------ccc--
Confidence 789999999863 3567899999999999999999999999999999997431110 0 000
Q ss_pred cccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEE----ecCCC---CCC-----------CCCCChHHHHH
Q 014349 231 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM----SGDAH---HIT-----------QPHIDGKGAIL 292 (426)
Q Consensus 231 ~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~----~~d~~---~~~-----------~~~~~~~~~~~ 292 (426)
+..+.--...++||||+|+||+..+... . .++.-+|.+... .+++. .+. .|......+..
T Consensus 204 ~~~~~~v~~~LFGDGAaAvVl~~~~~~~-~-~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~ 281 (393)
T PLN03172 204 THLDSLVGQALFGDGAAAVIIGADPDTK-I-ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEK 281 (393)
T ss_pred ccHHhhhccchhcCceEEEEEecCCCCc-c-cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHH
Confidence 0000012346789999999998743211 0 112123443321 11111 000 01111233456
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHHHHH
Q 014349 293 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIH 371 (426)
Q Consensus 293 a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l~ 371 (426)
.+++.|++.|+++.||+++.+|--|.+ -..++.+.++-.. .++..+ .+-..+|++.+||=++-|- .+.
T Consensus 282 ~~~~~L~~~gl~~~di~~~~~Hqgg~~-----Il~~v~~~Lgl~~--~~~~~s~~vl~~yGNtSSaSv~~vL~----~~~ 350 (393)
T PLN03172 282 SLVEAFAPIGINDWNSIFWIAHPGGPA-----ILDQVEIKLDLKE--EKLRATRHVLSDYGNMSSACVLFILD----EMR 350 (393)
T ss_pred HHHHHhhhcCCCccccceEEecCCcHH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCccHHhHHHHHHH----HHH
Confidence 778899999999999999999954433 3444555554321 111111 2345778887776444333 332
Q ss_pred hCCcCCCCCCCCCCCCCCCCCCccccCCC-CCCcEEEEeccccccceeeeEeee
Q 014349 372 HGVAPLTLNLAKPDPIFNDNFMPLTASKD-MPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 372 ~~~~pp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
++.+.. ...+. .....++..+||-|=+...++|+.
T Consensus 351 ~~~~~~------------------g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 386 (393)
T PLN03172 351 KKSIEE------------------GKGSTGEGLEWGVLFGFGPGLTVETVVLHS 386 (393)
T ss_pred hhhhhc------------------CCCCCCCCcceEEEEEeCCcceeeeeeeEe
Confidence 211000 00011 122567788999888888888876
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.1e-12 Score=128.18 Aligned_cols=261 Identities=11% Similarity=0.068 Sum_probs=155.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
.....|+.+|+++||+++|+++++++ .|++.++. + ...+..+..|...
T Consensus 104 e~~~~La~~Aa~~aL~~ag~~~~dId-----~lI~~t~t-~--------------------------~~~P~~a~~l~~~ 151 (391)
T PLN03169 104 EAVTQMAVEASLACIKEWGRPVSDIT-----HLVYVSSS-E--------------------------ARLPGGDLYLAKQ 151 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEECcC-C--------------------------CCCCcHHHHHHHH
Confidence 34567999999999999999888876 67777632 1 1223456789999
Q ss_pred cCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC
Q 014349 160 YGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236 (426)
Q Consensus 160 lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 236 (426)
||++.. .+.+..||++++.+|..|..+|++|..+.|||+++|....-+. . +. ..+ ++..
T Consensus 152 LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~----------~------~~-~~~-~~d~ 213 (391)
T PLN03169 152 LGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGFR----------P------PS-PDR-PYDL 213 (391)
T ss_pred hCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhcc----------C------CC-ccc-hhhh
Confidence 999752 4778999999999999999999999999999999997321100 0 00 000 1222
Q ss_pred CCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEE--ecCCCC-----C-----------CCCCCChHHHHHHHHHHH
Q 014349 237 RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHH-----I-----------TQPHIDGKGAILAMTRAL 298 (426)
Q Consensus 237 ~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~--~~d~~~-----~-----------~~~~~~~~~~~~a~~~al 298 (426)
....++||||+|+||+..+.... ....+ .+...+. ..++.. . ..|......+...++++|
T Consensus 214 ~~~~lFGDGAaA~vl~~~~~~~~-~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L 291 (391)
T PLN03169 214 VGAALFGDGAAAVIIGADPIPVS-ESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLM 291 (391)
T ss_pred hhhhhccCceEEEEEecCCCccc-CCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHH
Confidence 34567999999999986543200 01111 2221111 000000 0 001111123445778999
Q ss_pred HHcCCCCCCcc--EEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHHHHHhCCc
Q 014349 299 KQSGLQSHQVD--YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHGVA 375 (426)
Q Consensus 299 ~~agl~~~dId--~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~ 375 (426)
+++|++++||| ++.+|-.+.+ -..++.+.++-.. .+++.+ .+-..+||+.+|+=.+.|-.. ++.+.+
T Consensus 292 ~~~gl~~~did~~~~v~Hq~n~~-----il~~v~~~Lgl~~--ek~~~s~~~l~~~GNtsSasip~~L~~~---~~~~~~ 361 (391)
T PLN03169 292 KKAGLVEKDYNDLFWAVHPGGPA-----ILNRLEKKLKLAP--EKLECSRRALMDYGNVSSNTIVYVLEYM---REELKK 361 (391)
T ss_pred HHcCCCCCCCCcceEEecCCCHH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCCchHhHHHHHHHHH---HHhhcc
Confidence 99999999998 8888943322 2334444443211 112211 234578888887754444322 333321
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 376 PLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 376 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.. ..+.+.++..+||-|=+...++|+.
T Consensus 362 --------------------~~--~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 362 --------------------KG--EEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred --------------------cC--CCCCcEEEEEEEcccHhHHHHHHhh
Confidence 00 0123566777888776666666654
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-12 Score=127.28 Aligned_cols=270 Identities=12% Similarity=0.087 Sum_probs=162.1
Q ss_pred hhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHH
Q 014349 74 KDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMAS 153 (426)
Q Consensus 74 ~~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (426)
+......-...|+.+|+++||+++|+++++++ .+++.++.+. ..+..+
T Consensus 98 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-----~lI~~T~Tg~---------------------------~~Ps~a 145 (401)
T PLN03170 98 RQDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT-----HLVFCTTSGV---------------------------DMPGAD 145 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC---------------------------CCChHH
Confidence 33334444557999999999999999888776 6677664321 123567
Q ss_pred HHHHHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCC
Q 014349 154 GHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 230 (426)
Q Consensus 154 ~~i~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (426)
.+|...||++.- .+.+..+|++++.+|..|.++++++....|||+++|.++.-+. .+.. .
T Consensus 146 ~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~----------------~~~~-~ 208 (401)
T PLN03170 146 YQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFR----------------GPSE-S 208 (401)
T ss_pred HHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhccC----------------Cccc-c
Confidence 789999999763 5789999999999999999999999999999999997431110 0000 0
Q ss_pred cccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEe--------------cCCCC--C--CCCCCChHHHHH
Q 014349 231 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--------------GDAHH--I--TQPHIDGKGAIL 292 (426)
Q Consensus 231 ~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~--------------~d~~~--~--~~~~~~~~~~~~ 292 (426)
+ .+......++||||+|+||+..+... ...+..++...... ..+.. . ..|......+..
T Consensus 209 ~-~~~~~~~~LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~ 285 (401)
T PLN03170 209 H-LDSMVGQALFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIER 285 (401)
T ss_pred h-hhhhhhhhhhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHH
Confidence 0 11122345799999999998743210 01111123222110 01100 0 001111233456
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcce-ecccccccchhHHhHHHHHHHHHHHH-H
Q 014349 293 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAVLA-I 370 (426)
Q Consensus 293 a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~l~~~~~~-l 370 (426)
.++++|+++|+++.||+++.+|--|.. =..++.+.++-.. .++. -..+-..+||+.+|+=++-|-+.... +
T Consensus 286 ~v~~~L~~~gl~~~di~~~v~Hqgg~~-----il~~v~~~Lgl~~--~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~ 358 (401)
T PLN03170 286 SLEEAFKPLGITDYNSIFWVAHPGGPA-----ILDQVEAKVGLEK--ERMRATRHVLSEYGNMSSACVLFILDEMRKRSA 358 (401)
T ss_pred HHHHHHHhcCCCccccCeEEecCCcHH-----HHHHHHHHcCCCh--HHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHh
Confidence 788999999999999999999944322 2334444444321 1111 11234578888888755544443211 1
Q ss_pred HhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 371 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 371 ~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
+.+.+.+ ....+.++..+||-|=+..+++|++
T Consensus 359 ~~g~~~~----------------------G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 359 EDGQATT----------------------GEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred hcCCCCC----------------------CCCccEEEEEEeCchHhHHhHHhee
Confidence 2222110 0112567777888877777777776
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.7e-12 Score=124.75 Aligned_cols=263 Identities=15% Similarity=0.107 Sum_probs=152.0
Q ss_pred hccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHH
Q 014349 77 RSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHV 156 (426)
Q Consensus 77 ~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 156 (426)
........|+.+|+++||+++|+++++++ -|+++++.+. . .+..+..+
T Consensus 103 ~~~~~a~~la~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~----------------------~-----~P~~a~~v 150 (399)
T PLN03171 103 IAADAVPELAAEAAKKAIAEWGRPAADIT-----HLVVTTNSGA----------------------H-----IPGVDFRL 150 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC----------------------C-----CCchHHHH
Confidence 33445668999999999999999988887 7777774421 1 13456689
Q ss_pred HHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCccc
Q 014349 157 SMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPF 233 (426)
Q Consensus 157 ~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf 233 (426)
...||++.. .+.+..+|++++.+|..|..+|++|..+.|||+++|.++.... .++. . .+
T Consensus 151 ~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~~----------------~~d~-~-~~ 212 (399)
T PLN03171 151 VPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLFN----------------GPDE-G-CF 212 (399)
T ss_pred HHHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccccccC----------------CCCc-c-cH
Confidence 999999753 4566679999999999999999999999999999997322110 0000 0 01
Q ss_pred ccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC---C-----------C-CCCCChHHHHHHHHHHH
Q 014349 234 DCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---I-----------T-QPHIDGKGAILAMTRAL 298 (426)
Q Consensus 234 ~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~-----------~-~~~~~~~~~~~a~~~al 298 (426)
+..-.+.++||||+|+||++.+...++ .+..+........+.. + . ............+++++
T Consensus 213 ~~~v~~~LFGDGAaA~vl~~~~~~~~~---~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l 289 (399)
T PLN03171 213 QTLLNQGLFGDGAAAVIVGADADAAER---PLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCL 289 (399)
T ss_pred HhhhccccccCccEEEEEecCCCCCCC---CceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHH
Confidence 111136789999999999975432111 1123333222111110 0 0 00001122334446665
Q ss_pred HH---------cCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHH
Q 014349 299 KQ---------SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVL 368 (426)
Q Consensus 299 ~~---------agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~ 368 (426)
++ +|++++||+++ +|-.+-+ -...+.+.++-.. .+++.+ .+-..+|++.+||=.+.|-..+
T Consensus 290 ~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~-----il~~v~~~Lgl~~--ek~~~s~~~l~~yGNtssaSip~~L~~~~- 360 (399)
T PLN03171 290 LDAFAPLLGGDGGAEWNDLFWA-VHPGSSA-----ILDQVDAALGLEP--EKLAASRRVLSDYGNMFGATVIFALDELR- 360 (399)
T ss_pred HHHHHhhcccccCCCcccceEE-EcCCcHH-----HHHHHHHHcCCCH--HHhHHHHHHHHHhCcchhhhHHHHHHHHH-
Confidence 54 58889999998 6833321 2333444443221 122211 2345788888876554444332
Q ss_pred HHHhCCcCCCCCCCCCCCCCCCCCCccccCCCC-CCcEEEEeccccccceeeeEeee
Q 014349 369 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM-PISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 369 ~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
+++.. ..++. ..+.++..+||-|=+-.+++|+.
T Consensus 361 --~~~~~---------------------~~~~G~~~d~vll~~fG~Glt~~~~ll~~ 394 (399)
T PLN03171 361 --RQMEE---------------------AAAAGAWPELGVMMAFGPGLTVDAMLLHA 394 (399)
T ss_pred --hhHhh---------------------cCCCCCCcceEEEEEEcccHHHHHHHhhc
Confidence 22210 00010 12466777888876666666653
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.42 E-value=4e-11 Score=117.02 Aligned_cols=213 Identities=15% Similarity=0.098 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+++|+++||+++ ++++++ .+++++..+. ......+..|...||
T Consensus 49 ~~~la~~Aa~~aL~~a--~~~~Id-----~li~~t~s~~--------------------------~~~~s~a~~v~~~Lg 95 (379)
T TIGR01835 49 IVTMAASAAKPILDRN--DKQKID-----MVIFGTESGI--------------------------DQSKAAAVYVHGLLG 95 (379)
T ss_pred HHHHHHHHHHHHHHhC--CHhhCC-----EEEEEeCCCC--------------------------CCCCCHHHHHHHHhC
Confidence 3689999999999998 666776 7778774322 111246678999999
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
+++ +++.+.++|++++.||..|..+|++|..+.+||+++|..... .....-
T Consensus 96 l~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~---------------------------~~~~~~ 148 (379)
T TIGR01835 96 LQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYG---------------------------LESPGE 148 (379)
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcc---------------------------cCCCCC
Confidence 974 788899999999999999999999999999999999851000 001122
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEE-eEEE-ecCCCCCC------CCCCCh--------HHHHHHHHHHHHHcCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVR-GYGM-SGDAHHIT------QPHIDG--------KGAILAMTRALKQSGL 303 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~-g~~~-~~d~~~~~------~~~~~~--------~~~~~a~~~al~~agl 303 (426)
.+.||||+|+||++.. .+ ..+. +... ..+..... .|..++ .....++++.|++.|+
T Consensus 149 ~~~GdGA~A~Ll~~~~-------~i-~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~ 220 (379)
T TIGR01835 149 PTQGAGAVAMLVSADP-------KL-LAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGL 220 (379)
T ss_pred ccccCccEEEEEecCC-------Ce-eEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4589999999998632 12 2221 1111 11111111 111111 2344778889999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC--Ccce-----ecccccccchhHHhHHHHHHHHH
Q 014349 304 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS--GSLA-----FSSTKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 304 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~--~~~~-----v~s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
+++|||++..|-.-++. -..++..++...... ..+. -......+||+.+|+=.+.|..+
T Consensus 221 ~~~did~~i~H~p~~~~----~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~ 286 (379)
T TIGR01835 221 SLADFAAFCFHVPFTKM----GLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASL 286 (379)
T ss_pred CHHHcCEEEECCCCCcH----HHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHH
Confidence 99999999999654443 223334433211100 0000 00123488999998877666654
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.3e-12 Score=121.39 Aligned_cols=270 Identities=17% Similarity=0.149 Sum_probs=160.2
Q ss_pred hhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHH
Q 014349 74 KDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMAS 153 (426)
Q Consensus 74 ~~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (426)
+......-...|+.+|+++||+++|+++++++ .|+++++.+. ..+..+
T Consensus 93 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-----~lI~~T~Tg~---------------------------~~Ps~a 140 (389)
T PLN03168 93 RHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT-----HIVFATTSGV---------------------------NMPGAD 140 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC---------------------------CCccHH
Confidence 33444445567999999999999999988887 7888875421 123467
Q ss_pred HHHHHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCC
Q 014349 154 GHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 230 (426)
Q Consensus 154 ~~i~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (426)
.+|+..||++.- ++.+..||++++.+|..|..+|++|....|||+++|.++.-+ . .++.
T Consensus 141 ~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~-----~-----------~~~~-- 202 (389)
T PLN03168 141 HALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAVTY-----R-----------APSE-- 202 (389)
T ss_pred HHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhhhc-----c-----------Cccc--
Confidence 789999999762 688999999999999999999999999999999999743211 0 0000
Q ss_pred cccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEE--e--cCCC---CCCC-----------CCCChHHHHH
Q 014349 231 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--S--GDAH---HITQ-----------PHIDGKGAIL 292 (426)
Q Consensus 231 ~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~--~--~d~~---~~~~-----------~~~~~~~~~~ 292 (426)
...+......++||||+|+||+..+... ....++ .+..... . +++. .+.. |......+..
T Consensus 203 ~~~~~~~~~~LFGDGAaAvvl~~~~~~~-~~~~~~-~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~ 280 (389)
T PLN03168 203 NHLDGLVGSALFGDGAGVYVVGSDPKPE-VEKALF-EVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEK 280 (389)
T ss_pred ccHHHHhccccccCccEEEEEecCCCCc-cCCcce-EEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHH
Confidence 0011112456799999999999743211 011122 2221111 0 1111 0000 1111123345
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHHHHH
Q 014349 293 AMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIH 371 (426)
Q Consensus 293 a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l~ 371 (426)
.++++++..++...|++++.+|--|.+ =..++.+.++-.. .++..+ .+-..+|++.+||=++-| ..++
T Consensus 281 ~l~~~l~~~~~~~~d~~~~v~Hqgg~~-----Il~~v~~~Lgl~~--ek~~~s~~vl~~yGNtSSaSv~~vL----~~~~ 349 (389)
T PLN03168 281 FLNEARKCVGSPDWNEMFWAVHPGGPA-----ILDQVEAKLKLTK--DKMQGSRDILSEFGNMSSASVLFVL----DQIR 349 (389)
T ss_pred HHHHHHHhcCCCccccceEEecCCcHH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCccHhhhHHHHH----HHHH
Confidence 677788888888788898999954433 3444444444321 122211 244577888877644433 3333
Q ss_pred hCCcCCCCCCCCCCCCCCCCCCccccC-CCCCCcEEEEeccccccceeeeEeee
Q 014349 372 HGVAPLTLNLAKPDPIFNDNFMPLTAS-KDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 372 ~~~~pp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
++.+.+ ... ...+.+.++..+||-|=+...++|+.
T Consensus 350 ~~~~~~------------------g~~~~~~g~~~~ll~afGpG~t~~~~llr~ 385 (389)
T PLN03168 350 QRSVKM------------------GASTLGEGSEFGFFIGFGPGLTLEVLVLRA 385 (389)
T ss_pred HHHhhc------------------CCCCCCCCccEEEEEEEcchhhhhhhhhee
Confidence 222210 000 01122467777888776777777664
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.8e-12 Score=123.94 Aligned_cols=229 Identities=13% Similarity=0.089 Sum_probs=141.5
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH
Q 014349 78 SIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 78 ~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 157 (426)
...-...|+.+|+++||+++|+++.+++ -+++.++.+. . .+..+.+|+
T Consensus 98 ~~~~a~~La~~Aa~~AL~~ag~~~~dId-----~li~~t~t~~----------------------~-----~P~~a~~l~ 145 (391)
T PLN03173 98 VVVEVPKLGKEAAAKAIKEWGQPKSKIT-----HLVFCTTSGV----------------------D-----MPGADYQLT 145 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC----------------------c-----ccHHHHHHH
Confidence 3344458999999999999999888876 6777764321 1 235677899
Q ss_pred HHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccc
Q 014349 158 MKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 234 (426)
Q Consensus 158 ~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~ 234 (426)
..||++.. .+.+..||++++.+|..|.++++++..+.|||+++|.++..+. . ++. +..+
T Consensus 146 ~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~----------~------~~d--~~~~ 207 (391)
T PLN03173 146 KLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFR----------G------PSD--THLD 207 (391)
T ss_pred HHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhhC----------C------ccc--cchh
Confidence 99999863 4567999999999999999999999999999999997431110 0 000 0000
Q ss_pred cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEE----ecC----------CCC--C--CCCCCChHHHHHHHHH
Q 014349 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM----SGD----------AHH--I--TQPHIDGKGAILAMTR 296 (426)
Q Consensus 235 ~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~----~~d----------~~~--~--~~~~~~~~~~~~a~~~ 296 (426)
.--...++||||+|+||+..+.. ... .+.-++.+... .++ |.+ . ..|..-...+...+++
T Consensus 208 ~~v~~~LFGDGAaAvvl~~~~~~-~~~-~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~ 285 (391)
T PLN03173 208 SLVGQALFGDGAAAIIIGSDPVL-GVE-KPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTE 285 (391)
T ss_pred hhhhhhhhcCceEEEEEeCCCCC-CcC-CcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHH
Confidence 11234678999999999864321 001 11113332221 111 110 0 0111112334567889
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCccee-cccccccchhHHhHHHHHHHH
Q 014349 297 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF-SSTKGAIGHLLGAAGAVEAIF 365 (426)
Q Consensus 297 al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v-~s~k~~~Gh~~~AsG~~~l~~ 365 (426)
.|++.|+++.|||++.+|--|.+ =..++.+.++-.. .++.. ..+-..+|++.+||=.+-|-+
T Consensus 286 ~L~~~gl~~~di~~~v~Hqgg~~-----Il~~v~~~LgL~~--ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 286 AFKPLGISDWNSLFWIAHPGGPA-----ILDQVEAKLALKP--EKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred HHHhcCCCccccCeEEECCCcHH-----HHHHHHHHcCCCh--HHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 99999999999999999954433 3444555554321 11211 124557788887774444433
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.9e-13 Score=106.48 Aligned_cols=119 Identities=26% Similarity=0.368 Sum_probs=89.4
Q ss_pred eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCC-Cc
Q 014349 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS-GS 341 (426)
Q Consensus 263 ~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~-~~ 341 (426)
+|+++|.+++... ..|.....+...+++++|+++|++++|||++|+| |+++...+...+..+ .+
T Consensus 2 ~pla~i~~~~~~~-----~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~----------EaFA~~~l~~~~~lg~~~ 66 (123)
T PF02803_consen 2 KPLARIVGYASAG-----VDPEDMGLGPVPAARKALERAGLTPDDIDVIEIN----------EAFAAQVLAFLEALGLDP 66 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE------------SBHHHHHHHHHHHTTGG
T ss_pred CeEEEEEEEEEEe-----cCHHHhCchHHHHHHHHHHHhCCCccccchhhcc----------chhhhHHHHhhccccccc
Confidence 5789999998765 3455555566889999999999999999999999 999998887654422 23
Q ss_pred ceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceee
Q 014349 342 LAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419 (426)
Q Consensus 342 ~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~ 419 (426)
.++|...+ .+|||.||||+..++.++.+|+++- .++.+....+-||...+
T Consensus 67 ~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~~~----------------------------~~~gla~~~~ggG~g~a 118 (123)
T PF02803_consen 67 EKVNPNGGALALGHPLGASGARLVVELAHQLRRRG----------------------------GRYGLAAICAGGGQGSA 118 (123)
T ss_dssp GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHHHT----------------------------TSEEEEEEEETTTEEEE
T ss_pred cccCcccccccccccccccccchhhhhHHHHHHhc----------------------------hhhhhHHhcccceeeEE
Confidence 45666666 7899999999999999999998632 35788888899999999
Q ss_pred eEeee
Q 014349 420 LLFTK 424 (426)
Q Consensus 420 ~vl~~ 424 (426)
+||+|
T Consensus 119 ~ller 123 (123)
T PF02803_consen 119 VLLER 123 (123)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99987
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-11 Score=114.16 Aligned_cols=188 Identities=18% Similarity=0.192 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||++||+++++++ .+|+|... +. ...+..++..+|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID-----~lI~Gdll---------------------------~Q--~~sAs~vA~~LG 101 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID-----YLLAGDLL---------------------------NQ--IISANFAARELG 101 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCC---------------------------CC--cchHHHHHHHhC
Confidence 468999999999999999988887 77777521 00 123456778887
Q ss_pred CCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcce
Q 014349 162 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 241 (426)
Q Consensus 162 l~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~~ 241 (426)
+ |.+.|.++|+|+..||..|..+|++|.+|.+||++++.+.+...- -+.-. .-+..| ...-..
T Consensus 102 I--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerq------fr~P~-----eyg~qr----p~taqw 164 (337)
T PRK08304 102 I--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQ------FRFPT-----EYGGQR----PPTAQW 164 (337)
T ss_pred C--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhh------ccCch-----hccccC----CCcceE
Confidence 6 999999999999999999999999999999999999875443211 00000 001112 223456
Q ss_pred eccceEEEEecchHHHHhcCCeee----EEEEeEEEecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEe
Q 014349 242 IGEGSGVLVLEELEHAKKRGAKIY----AEVRGYGMSGDAHHITQPHIDG----KGAILAMTRALKQSGLQSHQVDYVNA 313 (426)
Q Consensus 242 ~geGa~alvL~~~~~A~~~g~~~~----a~i~g~~~~~d~~~~~~~~~~~----~~~~~a~~~al~~agl~~~dId~v~~ 313 (426)
.++||+|+||.+.. .+-++- ++|..++. ..|...+ .+...++.+-|++.|.+|+|-|.|..
T Consensus 165 tvtGAGA~i~~~~~----~~~~i~~~t~Gkv~D~g~-------~d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~t 233 (337)
T PRK08304 165 TVTGAGAVLLSREG----SGPRITHATIGKVVDLGI-------KDPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVT 233 (337)
T ss_pred EeeccEEEEEecCC----CCceEEEEeEEEEEecCC-------CCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEE
Confidence 88999999998642 122221 23333332 2333322 34567889999999999999999998
Q ss_pred cCCCCCCCCHHHHHHHHHHhhcc
Q 014349 314 HATSTPLGDTVEATAIRTVFSDH 336 (426)
Q Consensus 314 hgtgt~~~D~~E~~a~~~~~~~~ 336 (426)
-..|.. -..-+.+++..+
T Consensus 234 GDlg~v-----G~~i~~~ll~~~ 251 (337)
T PRK08304 234 GDLGRV-----GREILKELLKEE 251 (337)
T ss_pred cchHHH-----HHHHHHHHHHHh
Confidence 643321 223456666443
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-10 Score=112.80 Aligned_cols=252 Identities=14% Similarity=0.111 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
........++.++|+++|+++++++ -+++.++ +. ...+..+..|...+
T Consensus 187 ea~~v~~~~~~~lL~kaGi~p~dID-----~LIv~cS-~~--------------------------~p~PSlAa~I~n~L 234 (521)
T PLN02854 187 EAEAVMFGALDSLFSKTGVKPRDIG-----ILIVNCS-LF--------------------------NPTPSLSAMIVNHY 234 (521)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECC-CC--------------------------CCCCCHHHHHHHHh
Confidence 3445667788999999999888776 5666432 11 12346678899999
Q ss_pred CCC-C-Ceeecc-CCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 161 GFQ-G-PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 161 gl~-g-p~~~v~-~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
|++ . .++.++ .||++++.+|..|.++|+++....+||+++|.++ ..+ + ++.++
T Consensus 235 Glr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S--~~~---------------------y-~g~Dr 290 (521)
T PLN02854 235 KLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT--LNW---------------------Y-FGNDR 290 (521)
T ss_pred CCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee--cCC---------------------C-CCCch
Confidence 998 4 578888 7999999999999999999999999999999743 110 0 01112
Q ss_pred -C---cceeccceEEEEecchHHHHhcCCeee--EEEEeEEEecCCC-----------------CCC--CCCCChH----
Q 014349 238 -D---GFVIGEGSGVLVLEELEHAKKRGAKIY--AEVRGYGMSGDAH-----------------HIT--QPHIDGK---- 288 (426)
Q Consensus 238 -~---G~~~geGa~alvL~~~~~A~~~g~~~~--a~i~g~~~~~d~~-----------------~~~--~~~~~~~---- 288 (426)
. ..++||||+|+||++.+..+ +...| ..+.......|+. ..+ .+...+.
T Consensus 291 s~lv~~~LFgDGAAAvlLs~~~~~~--~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~ 368 (521)
T PLN02854 291 SMLLCNCIFRMGGAAVLLSNKARDR--KRSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKT 368 (521)
T ss_pred hhhcceeeeccceeEEEEecccccc--cccchheeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhh
Confidence 1 46789999999998743211 11111 1111211211111 000 0000000
Q ss_pred -----------------HHHHHHHHHHHHcCCCC------CCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec
Q 014349 289 -----------------GAILAMTRALKQSGLQS------HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 345 (426)
Q Consensus 289 -----------------~~~~a~~~al~~agl~~------~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~ 345 (426)
-....+++.|.++|+++ .|||++.+|.-|... ..++.+-++-.... .-+..
T Consensus 369 ~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~I-----Id~v~k~LgL~~~~-~e~sr 442 (521)
T PLN02854 369 NITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAV-----LDELQKNLQLSDWH-MEPSR 442 (521)
T ss_pred hhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHH-----HHHHHHHcCCCccc-ccchH
Confidence 02346788899999997 699999999655443 33444444432100 01122
Q ss_pred ccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 346 STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 346 s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
..-..+|++.++|=...|..+ ++.|.+ ++.+.++..+||-|=+..++|++.
T Consensus 443 ~tL~rfGNTSSASI~~~L~~~---~~kGri-------------------------k~GD~Vl~iaFGsGft~~sav~~~ 493 (521)
T PLN02854 443 MTLHRFGNTSSSSLWYELAYT---EAKGRV-------------------------SAGDRVWQIAFGSGFKCNSAVWKA 493 (521)
T ss_pred HHhhhcCChHhhHHHHHHHHH---HHcCCC-------------------------CCCCEEEEEEEchhhhhhheeeEE
Confidence 233366887777644444333 223321 123566667888776777777654
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.8e-10 Score=112.02 Aligned_cols=120 Identities=17% Similarity=0.169 Sum_probs=91.4
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
......++..|+++||+++|++++|++ -+++ ++.+. ...+..+..|..
T Consensus 169 ~~ea~~l~~~A~~~aL~kaGi~p~dID-----~LVv-~cS~~--------------------------~~~PSlaa~V~~ 216 (502)
T PLN02377 169 REEAEQVMFGALDNLFANTNVNPKDIG-----ILVV-NCSLF--------------------------NPTPSLSAMIVN 216 (502)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEE-ECCCC--------------------------CCCCcHHHHHHH
Confidence 344567999999999999999988775 5555 32211 123466788999
Q ss_pred HcCCCC--Ceeecc-CCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCccccc
Q 014349 159 KYGFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 235 (426)
Q Consensus 159 ~lgl~g--p~~~v~-~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 235 (426)
.||++. .++.++ .||++++.+|..|.++|+++....+||+++|.++..+. ++.
T Consensus 217 ~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~------------------------~~d 272 (502)
T PLN02377 217 KYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWY------------------------FGN 272 (502)
T ss_pred HhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccC------------------------CCC
Confidence 999984 788899 69999999999999999999999999999997432110 111
Q ss_pred CCC----cceeccceEEEEecch
Q 014349 236 GRD----GFVIGEGSGVLVLEEL 254 (426)
Q Consensus 236 ~~~----G~~~geGa~alvL~~~ 254 (426)
++. ..++||||+|+||+..
T Consensus 273 ~~s~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 273 KKSMLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred CccccccceeeccccEEEEEecc
Confidence 222 3678999999999874
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.8e-10 Score=104.85 Aligned_cols=215 Identities=20% Similarity=0.237 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...-|+++|++++|.++++++.++. .|++|+..+.. .. -..+..|+..|
T Consensus 50 D~vTmaveAA~~~l~r~~~D~~~Ig-----~v~vgTES~~d----------------~~----------K~~at~v~~~l 98 (377)
T COG3425 50 DAVTMAVEAARNALKRADIDPSKIG-----AVIVGSESGPD----------------AV----------KPTATIVAEAL 98 (377)
T ss_pred hHHHHHHHHHHHHHhccCCCHHHCc-----eEEEecCCCcc----------------cc----------cchHHHHHHHh
Confidence 3567999999999999999877665 78888854321 11 23456789999
Q ss_pred CCCCCe--eeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQGPN--HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~gp~--~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|+..-. +-+..+|-++..||..|..+|.+|..+.+||+|.|..... |. +.-
T Consensus 99 g~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~-------------------~~--------~~~ 151 (377)
T COG3425 99 GLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYA-------------------PG--------DAL 151 (377)
T ss_pred CCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccC-------------------CC--------ccc
Confidence 997543 3477899999999999999999999999999999962110 10 122
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEE-ecCCCCCCCCC------CC--------hHHHHHHHHHHHHHcCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM-SGDAHHITQPH------ID--------GKGAILAMTRALKQSGL 303 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~-~~d~~~~~~~~------~~--------~~~~~~a~~~al~~agl 303 (426)
-+.-|.|++|+|+... ..+.+.+.+.+. ..|-.....|. .. ......+.+..+++.|+
T Consensus 152 E~t~GAGavA~lIg~n-------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gl 224 (377)
T COG3425 152 EYTAGAGAVAFLIGKN-------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGL 224 (377)
T ss_pred CccCCCceEEEEEccC-------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCC
Confidence 2347899999999852 234455545443 33332222221 11 14456788888999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHH
Q 014349 304 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAV 367 (426)
Q Consensus 304 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~ 367 (426)
+|+|.||+..|-+-++. =..+.+.+.-... .+.-+ .....+|.+..+|..++|+..+
T Consensus 225 s~~dfdy~vfH~P~~k~----~~ka~k~l~~~~e---~v~~~l~~~~~vGN~YtgS~~L~Las~L 282 (377)
T COG3425 225 SPDDFDYIVFHQPNGKF----PKKAAKSLGFKEE---QVKPGLVYPQRIGNTYTGSLLLGLASLL 282 (377)
T ss_pred ChhhhCeEEecCCCCch----HHHHHHHhCccHh---hcCccchhhhhcCcccchhHHHHHHHHH
Confidence 99999999999776655 4555555543311 12112 2223789999999988888765
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-09 Score=106.80 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
.....++..|+++||+++|+++++++ -+++.++.+. ..+..+..|...
T Consensus 146 ~ea~~la~~Aa~~aL~~agi~p~dId-----~lIv~tst~~---------------------------~~Pslaa~V~~~ 193 (478)
T PLN02932 146 KETEEVIIGAVDNLFRNTGISPSDIG-----ILVVNSSTFN---------------------------PTPSLSSILVNK 193 (478)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC---------------------------CCCcHHHHHHHH
Confidence 34567999999999999999988886 7777775421 234667889999
Q ss_pred cCCC-C-Ceeecc-CCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC
Q 014349 160 YGFQ-G-PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236 (426)
Q Consensus 160 lgl~-g-p~~~v~-~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 236 (426)
+|++ . .++.++ .||++++.+|..|.++|+++....+||+++|.++..... .. .+ +..
T Consensus 194 lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~-----------------~d-~r--~~l 253 (478)
T PLN02932 194 FKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYL-----------------GN-NK--SML 253 (478)
T ss_pred hCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCC-----------------Cc-ch--hhh
Confidence 9997 3 688898 899999999999999999999999999999974322110 00 00 001
Q ss_pred CCcceeccceEEEEecchH
Q 014349 237 RDGFVIGEGSGVLVLEELE 255 (426)
Q Consensus 237 ~~G~~~geGa~alvL~~~~ 255 (426)
-...++||||+|+||+..+
T Consensus 254 ~t~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 254 VTNCLFRIGGAAILLSNRS 272 (478)
T ss_pred ccceeecccceEEEEeccc
Confidence 2356789999999999754
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.7e-09 Score=98.25 Aligned_cols=186 Identities=16% Similarity=0.193 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||++||+++++++ -+++|+..+. ..++..++..||
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID-----~i~vGdL~nQ-----------------------------~ipssfvar~LG 99 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ-----FFLAGDLMNQ-----------------------------ITPTSFAARTLG 99 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC-----------------------------cCcHHHHHHHhC
Confidence 457999999999999999988887 7788764311 122336777887
Q ss_pred CCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcce
Q 014349 162 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 241 (426)
Q Consensus 162 l~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~~ 241 (426)
+ |.+.|.++|+++..||..|..+|++|.+|.|||+......+...- -+.-. .-+..||.. .-.
T Consensus 100 I--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErq------fR~P~-----eyG~Qrp~t----aqw 162 (334)
T PRK12404 100 I--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQ------FRYPT-----EYGGQKPPT----AQW 162 (334)
T ss_pred C--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhh------ccCcc-----cccCcCCCc----ccE
Confidence 5 779999999999999999999999999999999988664333211 11110 112233322 223
Q ss_pred eccceEEEEecchHHHHhcCCeee------EEEEeEEEecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEE
Q 014349 242 IGEGSGVLVLEELEHAKKRGAKIY------AEVRGYGMSGDAHHITQPHIDG----KGAILAMTRALKQSGLQSHQVDYV 311 (426)
Q Consensus 242 ~geGa~alvL~~~~~A~~~g~~~~------a~i~g~~~~~d~~~~~~~~~~~----~~~~~a~~~al~~agl~~~dId~v 311 (426)
.--|++++||.+. +..|+ ++|..++. .+|...+ .+...++.+-|++.|.+|+|-|.|
T Consensus 163 TvTgaga~~l~~~------~~~~~i~~~T~Gkv~D~g~-------~d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI 229 (334)
T PRK12404 163 TVTGAGAAILSKT------GDGPRVTSATIGRVVDMGL-------TDPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLI 229 (334)
T ss_pred EEEceEEEEEecC------CCCceEEEEEEEEEEecCC-------CCcccchhhhhHHHHHHHHHHHHHhCCChhhccEE
Confidence 4457888888753 22232 23333332 2333332 345677899999999999999999
Q ss_pred EecCCCCCCCCHHHHHHHHHHhhcc
Q 014349 312 NAHATSTPLGDTVEATAIRTVFSDH 336 (426)
Q Consensus 312 ~~hgtgt~~~D~~E~~a~~~~~~~~ 336 (426)
..-..|.. -..-+.+++..+
T Consensus 230 ~TGDLg~v-----G~~i~~~ll~~~ 249 (334)
T PRK12404 230 VTGDLGHV-----GREIAKDLLHKH 249 (334)
T ss_pred EEcchHHH-----HHHHHHHHHHHc
Confidence 98643321 234456666544
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.7e-09 Score=105.13 Aligned_cols=91 Identities=12% Similarity=0.122 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH---
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS--- 157 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~--- 157 (426)
....|++.|+++||+++|+++++++ -|+++|..+.. .....+..|.
T Consensus 52 d~~tmA~~AA~~aL~~agid~~~Id-----llivaTeT~~d--------------------------~~ps~A~~v~~ll 100 (459)
T PLN02577 52 DVISMSLTVVKSLLEKYNIDPKQIG-----RLEVGSETVID--------------------------KSKSIKTFLMQLF 100 (459)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCCchHHHHHHHH
Confidence 3568999999999999999988887 88888854321 1123344443
Q ss_pred HHcCCCC-CeeeccCCcchHHHHHHHHHHHHHcCCC--CEEEEeecCC
Q 014349 158 MKYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTES 202 (426)
Q Consensus 158 ~~lgl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~--d~vlv~g~d~ 202 (426)
..+|.+. +++.+..+|.++..||..|..+|++|.. +.+||+++|.
T Consensus 101 ~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~ 148 (459)
T PLN02577 101 EESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADS 148 (459)
T ss_pred HHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEech
Confidence 4566654 7888999999999999999999999985 9999999996
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.4e-09 Score=93.89 Aligned_cols=125 Identities=21% Similarity=0.269 Sum_probs=111.0
Q ss_pred CCCChhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhh
Q 014349 69 SWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 148 (426)
Q Consensus 69 ~~~~~~~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (426)
.+|++-..|||++..||++.++.+++.+.. +.+ .+++++..|+.....+..+.+.+.+ .++|..|..++
T Consensus 21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~~----~~d-----~~VfaS~~Gel~~t~~ll~~l~~~~--~lSPT~Fs~SV 89 (218)
T PF13723_consen 21 AFLPPMQRRRLSRLSRLALEAALECLAEDE----QPD-----AIVFASRHGELERTFKLLEALAEEE--ELSPTAFSQSV 89 (218)
T ss_pred ccCCHHHHcccCHHHHHHHHHHHHHHhccC----CCC-----cEEEEeCCCcHHHHHHHHHHHHhCC--CcCccchhhhh
Confidence 348899999999999999999999986531 111 7889999999999999999988753 59999999999
Q ss_pred hhHHHHHHHHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC
Q 014349 149 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 205 (426)
Q Consensus 149 ~~~~a~~i~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~ 205 (426)
.|.+++++++..+.++|+.++..+-.+...||..|+..+..| ++.||++.+|..+.
T Consensus 90 HNA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p 145 (218)
T PF13723_consen 90 HNAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP 145 (218)
T ss_pred hhHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999 88899999987543
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1e-08 Score=101.69 Aligned_cols=118 Identities=18% Similarity=0.170 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
-...+...|+++||+++|++++|++ -+++.++. ....+..+..|...+
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p~DID-----iLIv~~S~---------------------------~~~~PSlaa~I~n~l 222 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKPKDIG-----ILIVNCSL---------------------------FNPTPSLSAMVINHY 222 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCC---------------------------CCCCchHHHHHHHHh
Confidence 3557889999999999999988876 55655431 112346778899999
Q ss_pred CCCC--Ceeecc-CCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 161 GFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 161 gl~g--p~~~v~-~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
|++. .++.++ .||++++.||..|.++|+++....+||+++|.++ . .+. +..++
T Consensus 223 Glr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S-~-n~y----------------------~g~dr 278 (511)
T PLN02192 223 KLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT-L-NWY----------------------FGNDR 278 (511)
T ss_pred CCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc-c-cCC----------------------CCCCH
Confidence 9984 789999 6999999999999999999999999999999744 1 100 01112
Q ss_pred Cc----ceeccceEEEEecch
Q 014349 238 DG----FVIGEGSGVLVLEEL 254 (426)
Q Consensus 238 ~G----~~~geGa~alvL~~~ 254 (426)
.- .++||||+|+||++.
T Consensus 279 s~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 279 SMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred HHHhccccccccceEEEEecc
Confidence 11 358999999999874
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-09 Score=101.18 Aligned_cols=95 Identities=27% Similarity=0.294 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+...|+.++++++|+++++++++++ .|++|+..... ....++..++...
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id-----~v~~G~~~~~~--------------------------~g~~~ar~~~l~a 73 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDID-----AVIVGNVLQEG--------------------------EGQNIARQAALAA 73 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEE-----EEEEE-SSSCT--------------------------TTCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhcccchhhhh-----hcCcccccccc--------------------------cchhhhhhhhhhc
Confidence 3568999999999999999988887 89999854321 1234556677777
Q ss_pred CCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCCh
Q 014349 161 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 206 (426)
Q Consensus 161 gl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~ 206 (426)
||. -|.++|+.+|+||+.||..|++.|++|++|++|++|+|+++..
T Consensus 74 Gl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 74 GLPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTS
T ss_pred ccccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccc
Confidence 874 3899999999999999999999999999999999999997654
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.4e-07 Score=92.90 Aligned_cols=91 Identities=10% Similarity=0.054 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|++.|++++|+++++++++++ -|++++..+.. .....+..|...|
T Consensus 49 d~~tma~~AA~~lL~~a~id~~~Id-----~Liv~TeS~~d--------------------------~sps~a~~v~~lL 97 (454)
T TIGR01833 49 DINSLCLTVVSKLMERYNIDYNQIG-----RLEVGTETIID--------------------------KSKSVKTVLMQLF 97 (454)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCCC--------------------------CCCchHHHHHHHH
Confidence 4578999999999999999888876 78888754221 1223455666654
Q ss_pred ---CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCC--CEEEEeecCC
Q 014349 161 ---GFQG-PNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTES 202 (426)
Q Consensus 161 ---gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~--d~vlv~g~d~ 202 (426)
|.+. .++.+..+|+++..||..|..+|++|.. +.+||++.|.
T Consensus 98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 4443 6788999999999999999999999974 8999999996
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.4e-08 Score=89.18 Aligned_cols=192 Identities=15% Similarity=0.161 Sum_probs=128.2
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH
Q 014349 78 SIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 78 ~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 157 (426)
.+.....+.+++.++||+.+++.+.|++ .|++.++.|- ..+.+-.+|.
T Consensus 72 fie~a~~l~v~a~r~aL~~~~l~pedId-----~vv~vtsTG~---------------------------~~Ps~dari~ 119 (356)
T COG3424 72 FIEEAVPLGVDALRRALDGSPLRPEDID-----AVVTVTSTGL---------------------------ATPSLDARIV 119 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHCc-----EEEEEeeccc---------------------------cCCChhHHHH
Confidence 3445567899999999999999888876 6666664432 2233445788
Q ss_pred HHcCCCCCe---eeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccc
Q 014349 158 MKYGFQGPN---HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 234 (426)
Q Consensus 158 ~~lgl~gp~---~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~ 234 (426)
..|||.... ....-||+.+..+|..|.++++..-...|||+.+|.++-.+. +.|
T Consensus 120 ~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~~-----------------------~~d 176 (356)
T COG3424 120 GELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTYV-----------------------FAD 176 (356)
T ss_pred hhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeeee-----------------------cCC
Confidence 889986422 224569999999999999999999999999999997532110 011
Q ss_pred cCCCc----ceeccceEEEEecchHHHHhc-CCee--e----------EEEEeEEEecCCCCC----CCCCCChHHHHHH
Q 014349 235 CGRDG----FVIGEGSGVLVLEELEHAKKR-GAKI--Y----------AEVRGYGMSGDAHHI----TQPHIDGKGAILA 293 (426)
Q Consensus 235 ~~~~G----~~~geGa~alvL~~~~~A~~~-g~~~--~----------a~i~g~~~~~d~~~~----~~~~~~~~~~~~a 293 (426)
..... -++|||++|+|+.-...+... ..++ + -.+-||....+|.+. ..|..-...+...
T Consensus 177 ~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~ 256 (356)
T COG3424 177 DTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPN 256 (356)
T ss_pred CCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhh
Confidence 11112 248999999999864332221 1111 0 124455555555431 1222222445677
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCCCCCHH
Q 014349 294 MTRALKQSGLQSHQVDYVNAHATSTPLGDTV 324 (426)
Q Consensus 294 ~~~al~~agl~~~dId~v~~hgtgt~~~D~~ 324 (426)
+...|...|++.+||+.+.+|--|-+.-|+.
T Consensus 257 V~~fL~~~~ls~~dI~~w~~HPGG~KVida~ 287 (356)
T COG3424 257 VTTFLATHGLSIEDIEAWVVHPGGPKVIDAY 287 (356)
T ss_pred HHHHHHHcCCchhhhceeeeCCCCchHHHHH
Confidence 8999999999999999999997776654443
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.3e-07 Score=89.71 Aligned_cols=120 Identities=13% Similarity=0.103 Sum_probs=84.4
Q ss_pred HHHHHHH-HHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 82 FIAYALC-AADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 82 ~~~l~~~-a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...|++. |+++||+++|+++++++ -+++.++ +. ...+..+..+...+
T Consensus 133 e~em~i~~A~~~aL~~aGi~p~dID-----~LIvs~T-~~--------------------------~~~Pslaa~l~~~L 180 (466)
T PLN00415 133 ESELVIFGALNSLFKKTGIEPREVG-----IFIVNCS-LF--------------------------NPNPSLSSMIVNRY 180 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECc-CC--------------------------CCCchHHHHHHHHh
Confidence 3455555 77788899999887775 4444331 11 11245667899999
Q ss_pred CCCC--CeeeccC-CcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC-
Q 014349 161 GFQG--PNHAAVT-ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG- 236 (426)
Q Consensus 161 gl~g--p~~~v~~-acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~- 236 (426)
|++. ..+.+.. ||++++.+|..|.++++++....+||+++|.++.... . +-+..
T Consensus 181 GLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~-~---------------------~~dr~~ 238 (466)
T PLN00415 181 KLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMY-R---------------------GNDRSM 238 (466)
T ss_pred CCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEeccccccc-C---------------------CCcHhH
Confidence 9973 5677887 9999999999999999999999999999997432110 0 00000
Q ss_pred -CCcceeccceEEEEecchH
Q 014349 237 -RDGFVIGEGSGVLVLEELE 255 (426)
Q Consensus 237 -~~G~~~geGa~alvL~~~~ 255 (426)
-...++||||+|+||++..
T Consensus 239 lv~n~LFgDGAAAvlLs~~~ 258 (466)
T PLN00415 239 LVPNCLFRVGGAAVMLSNRS 258 (466)
T ss_pred hccceeecccceEEEEecCc
Confidence 0135689999999999754
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.50 E-value=5.7e-07 Score=82.28 Aligned_cols=126 Identities=16% Similarity=0.147 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
+....+...++.++|+.+|+.|++++ .+++.++... ..+.++..|...
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dId-----iLVvncs~f~---------------------------ptPSLsamIvnr 128 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDID-----ILVVNCSLFN---------------------------PTPSLSAMIVNR 128 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECcCCC---------------------------cCCcHHHHHHHH
Confidence 34556788899999999999988886 7777765422 224667789999
Q ss_pred cCCCCCe--eec-cCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC
Q 014349 160 YGFQGPN--HAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236 (426)
Q Consensus 160 lgl~gp~--~~v-~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 236 (426)
||++.-. +.+ ..||++|+.+|..|.++++.-.-..+||+.+|.....+ ..+-++.-.+
T Consensus 129 ~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~~-Y~G~~rsmlv------------------ 189 (290)
T PF08392_consen 129 YGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISANW-YRGNDRSMLV------------------ 189 (290)
T ss_pred hCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeeccccc-ccCCcHHHhh------------------
Confidence 9998744 443 34899999999999999999998999999999854332 2111111111
Q ss_pred CCcceeccceEEEEecchHHH
Q 014349 237 RDGFVIGEGSGVLVLEELEHA 257 (426)
Q Consensus 237 ~~G~~~geGa~alvL~~~~~A 257 (426)
...++.+|++|++|.+...-
T Consensus 190 -~NcLFr~GgAAvLLSn~~~~ 209 (290)
T PF08392_consen 190 -SNCLFRMGGAAVLLSNKPSD 209 (290)
T ss_pred -ccccccCCceeEEeecCccc
Confidence 13458899999999986653
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.1e-07 Score=80.32 Aligned_cols=95 Identities=18% Similarity=0.095 Sum_probs=69.6
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH
Q 014349 78 SIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 78 ~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 157 (426)
...-...|+.+|+++||+++|+++.++. .+++-++.|- ..+.+-.++.
T Consensus 96 ~~~~a~~L~~~Aa~~AL~~~g~~~~dIt-----hlv~vs~TG~---------------------------~~PglD~~l~ 143 (226)
T PF00195_consen 96 YAEEAPPLAEEAARKALAEAGLDPSDIT-----HLVTVSCTGI---------------------------AAPGLDARLI 143 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS-GGGEC-----EEEEEESSSS---------------------------ECS-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcccc-----eEEEEecCCc---------------------------CCCchhHHHH
Confidence 3344567999999999999999887776 6776665432 2234445789
Q ss_pred HHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCC
Q 014349 158 MKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 204 (426)
Q Consensus 158 ~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~ 204 (426)
..|||+.. .....-||.+|..+|..|....++..-..|||+.+|.++
T Consensus 144 ~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 144 NRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS 193 (226)
T ss_dssp HHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG
T ss_pred hcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE
Confidence 99999763 344667999999999999999999999999999999754
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.4e-08 Score=71.38 Aligned_cols=64 Identities=20% Similarity=0.264 Sum_probs=47.4
Q ss_pred eeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcceeccce
Q 014349 167 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGS 246 (426)
Q Consensus 167 ~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~~~geGa 246 (426)
|.|..+|++++.||..|..+|++|.++.+||++.|....... +......+++||||
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~------------------------~~~~~~~~~~gDgA 56 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVD------------------------RTDRQTAFIFGDGA 56 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSH------------------------TTHHHHHTTB-EEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeecccccccc------------------------ccccCcceeecchh
Confidence 457889999999999999999999999999999997433111 00112245689999
Q ss_pred EEEEecch
Q 014349 247 GVLVLEEL 254 (426)
Q Consensus 247 ~alvL~~~ 254 (426)
+|+||++.
T Consensus 57 aA~vl~~~ 64 (80)
T PF08545_consen 57 AAVVLSRD 64 (80)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEec
Confidence 99999985
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00027 Score=64.63 Aligned_cols=191 Identities=18% Similarity=0.173 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
..+|..+|+..||+.+++.++++ .++++...- + ....++..+..|+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dI------d~~~aGDLl--------------------------n--Q~i~s~f~ar~l~ 96 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDI------DYLFAGDLL--------------------------N--QIISSSFAARDLG 96 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-------SEEEEEETT--------------------------C--CCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHC------eEEEehhhh--------------------------h--hhHHHHHHHHhcC
Confidence 45788999999999999987666 455554210 0 0133345666666
Q ss_pred CCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcce
Q 014349 162 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 241 (426)
Q Consensus 162 l~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~~ 241 (426)
+ |-+-+-.+|++...+|.+|..+|..|-++.+|++.+....+...-. +.-.. -+..||- ..-.
T Consensus 97 i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQf------R~P~E-----yG~Qrp~----tAqw 159 (329)
T PF07451_consen 97 I--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQF------RFPTE-----YGGQRPP----TAQW 159 (329)
T ss_dssp ----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT---------GG-----GT----T----T--E
T ss_pred C--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhc------cCchh-----ccCCCCC----cccE
Confidence 5 8888999999999999999999999999999998886543332111 11100 0122221 2233
Q ss_pred eccceEEEEecchHHHHhcCCeeeEEEEeEEEec-CCCCCCCCCCChH----HHHHHHHHHHHHcCCCCCCccEEEecCC
Q 014349 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-DAHHITQPHIDGK----GAILAMTRALKQSGLQSHQVDYVNAHAT 316 (426)
Q Consensus 242 ~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~-d~~~~~~~~~~~~----~~~~a~~~al~~agl~~~dId~v~~hgt 316 (426)
.--|++++||.+... .| +|.+..... --....+|...+. +...+|.+-|++.|.+|+|-|.|..-..
T Consensus 160 TVTGaGa~il~~~~~------~p--~It~~T~GkVvD~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDL 231 (329)
T PF07451_consen 160 TVTGAGAAILSKEGS------GP--RITHATIGKVVDMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDL 231 (329)
T ss_dssp E--EEEEEEEESS--------SE--EEEEEE----B-SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-
T ss_pred EEeceEEEEEecCCC------Cc--EEEEEEEEEEEEcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecch
Confidence 556889999986432 23 233322111 0122345544443 3446688889999999999999998633
Q ss_pred CCCCCCHHHHHHHHHHhhcc
Q 014349 317 STPLGDTVEATAIRTVFSDH 336 (426)
Q Consensus 317 gt~~~D~~E~~a~~~~~~~~ 336 (426)
|. +-..-+.+++..+
T Consensus 232 g~-----vG~~il~~Ll~~~ 246 (329)
T PF07451_consen 232 GK-----VGRKILRDLLKEK 246 (329)
T ss_dssp HH-----HHHHHHHHHHHHT
T ss_pred HH-----HHHHHHHHHHHHc
Confidence 21 1234566666544
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00028 Score=59.89 Aligned_cols=90 Identities=20% Similarity=0.244 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
..-|++.|++..|++.+++++++. -+++||-.+- .. .-.++..+...||
T Consensus 53 ~vTmA~nAa~~ll~~~~id~~~Ig-----~l~vgTES~v----------------D~----------sKs~~t~v~~ll~ 101 (174)
T PF01154_consen 53 IVTMAANAAKPLLDRYNIDPDDIG-----RLIVGTESGV----------------DK----------SKSISTYVHQLLG 101 (174)
T ss_dssp HHHHHHHHHHTTHHHHT-HHHHEE-----EEEEE-SS-S----------------BS----------SS-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcc-----EEEEeccccc----------------cc----------cccHHHHHHHHhC
Confidence 467899999999999887654443 4567763211 11 1135667889999
Q ss_pred CCCC----eeeccCCcchHHHHHHHHHHHHHcCCCC--EEEEeecCC
Q 014349 162 FQGP----NHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTES 202 (426)
Q Consensus 162 l~gp----~~~v~~acas~~~Al~~A~~~I~~G~~d--~vlv~g~d~ 202 (426)
+.+. .+-+-.+|-+|..||..|+.+|+++..+ .+||++.|.
T Consensus 102 ~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 102 LSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp TTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred cCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 9542 3557889999999999999999999765 899999996
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0016 Score=49.58 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=54.2
Q ss_pred HHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCC
Q 014349 298 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 377 (426)
Q Consensus 298 l~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp 377 (426)
|+++|++++|||++..|-.+.+ -...+.+.++-.. .+. .. .-..+||+.+|+-.+.+..+ ++.+.+
T Consensus 1 L~~~g~~~~did~~i~hq~~~~-----~~~~~~~~lgi~~--~~~-~~-~~~~~Gn~~sa~~~~~L~~~---~~~g~~-- 66 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKK-----ILDSIAKRLGIPP--ERF-PD-NLAEYGNTGSASIPINLADA---LEEGRI-- 66 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHH-----HHHHHHHHHTS-G--GGB-E--THHHH-B-GGGHHHHHHHHH---HHTTSS--
T ss_pred CccccCCHHHCCEEEeCCCCHH-----HHHHHHHHcCCcH--HHH-HH-HHhccCcchhhhHHHHHHHH---HHcCCC--
Confidence 6899999999999999954432 2233444444321 112 22 23789999999877776554 444432
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 378 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++.-++|.|.+.++++++
T Consensus 67 -----------------------~~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 67 -----------------------KPGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp -----------------------CTTEEEEEEEEETTTEEEEEEEE
T ss_pred -----------------------CCCCEEEEEEEEhhheeEEEEEE
Confidence 23567788899999999988886
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.08 E-value=3.9 Score=39.10 Aligned_cols=113 Identities=14% Similarity=0.220 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|.+.+....++.-.++++.+- -+-||+-.- ++.. -.+=..+-++|+
T Consensus 60 i~Sl~ltvvs~Lmery~i~~~~IG-----RLEVGTETi-------------------iDKS-------KSVKt~LMqLF~ 108 (462)
T KOG1393|consen 60 IISLSLTVVSRLMERYNIDPDSIG-----RLEVGTETI-------------------IDKS-------KSVKTVLMQLFE 108 (462)
T ss_pred hhhhhHHHHHHHHHHhCCChhhcc-----eEEecceec-------------------cccc-------hHHHHHHHHHhh
Confidence 556788899999999999876653 355666220 0000 011123444454
Q ss_pred CCC----CeeeccCCcchHHHHHHHHHHHHHcCCCC--EEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCccccc
Q 014349 162 FQG----PNHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 235 (426)
Q Consensus 162 l~g----p~~~v~~acas~~~Al~~A~~~I~~G~~d--~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 235 (426)
=.| ..+...++|=+|..||..|.++|++---| .+||+..|...- +++.+||-.
T Consensus 109 ~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY--------------------~~G~aRpTG- 167 (462)
T KOG1393|consen 109 ESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVY--------------------AKGNARPTG- 167 (462)
T ss_pred hcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEe--------------------cCCCCCCCC-
Confidence 222 33456689999999999999999987655 667766664111 446677643
Q ss_pred CCCcceeccceEEEEecc
Q 014349 236 GRDGFVIGEGSGVLVLEE 253 (426)
Q Consensus 236 ~~~G~~~geGa~alvL~~ 253 (426)
|-||.|+++..
T Consensus 168 -------GAgAVAmLIgP 178 (462)
T KOG1393|consen 168 -------GAGAVAMLIGP 178 (462)
T ss_pred -------CcceEEEEEcC
Confidence 67888888875
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.97 E-value=3.7 Score=40.91 Aligned_cols=101 Identities=15% Similarity=-0.001 Sum_probs=56.8
Q ss_pred EEEEeEEEecCCCCCCCCC--CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH-HHHHHHHHHhhcccCCCcc
Q 014349 266 AEVRGYGMSGDAHHITQPH--IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT-VEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~--~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~-~E~~a~~~~~~~~~~~~~~ 342 (426)
+.|.|.+...-+.+...+. ....-..++++++|+++|++++|||.+.+. +.++..+. .....+....+.. .++
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~---~~~ 80 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCG---EKV 80 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcC---CCc
Confidence 4566666544333211111 113445789999999999999999987753 33332231 1122222333321 112
Q ss_pred eecccccccchhHHhHHHHHHHHHHHHHHhCCc
Q 014349 343 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 375 (426)
Q Consensus 343 ~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~ 375 (426)
|...+. ..++||+..+..+..+++.|..
T Consensus 81 p~~~v~-----~~CaSg~~al~~A~~~I~sG~~ 108 (426)
T PRK08170 81 PAWTVQ-----RNCASGMQALDSAAANIALGRA 108 (426)
T ss_pred eeeecc-----chhhHHHHHHHHHHHHHHCCCC
Confidence 322222 2378889999999999988763
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.18 E-value=3.1 Score=40.87 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=57.9
Q ss_pred EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-HHHHHHHHHHhhcccCCCccee
Q 014349 266 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAF 344 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D-~~E~~a~~~~~~~~~~~~~~~v 344 (426)
+.|.|++...-+.+... ....-..++++++|+++||+++|||.+.+. +.++.++ ......+...++... ..++
T Consensus 3 v~IvG~g~t~~~~~~~~--~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~---~~~~ 76 (385)
T PRK12578 3 VAVIGVGNSKFGRRDDV--SVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTG---KVPL 76 (385)
T ss_pred eEEEeecccceeecCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCC---CCee
Confidence 35777766543332111 112345789999999999999999998763 3332211 112233444444321 1111
Q ss_pred cccccccchhHHhHHHHHHHHHHHHHHhCCc
Q 014349 345 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 375 (426)
Q Consensus 345 ~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~ 375 (426)
. + +..+++|+..+..+...++.|..
T Consensus 77 ~-v-----~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 77 R-V-----EAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred E-E-----eccCHHHHHHHHHHHHHHHCCCC
Confidence 1 1 34678889999999999998863
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=85.75 E-value=4.4 Score=39.79 Aligned_cols=94 Identities=16% Similarity=0.062 Sum_probs=56.9
Q ss_pred EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec
Q 014349 266 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 345 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~ 345 (426)
+.|.|.+...-+.+. .. ....-..+++++||+++||+++|||.+.+.. ..... ....+.+.++.. +.++
T Consensus 10 vaIvG~g~t~~~~~~-~~-t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~-~~~~~---~~~~la~~lGl~----~~~~- 78 (384)
T PRK06158 10 TAIVGAATAGLGEAP-GL-SAMELLAQAAHRALADAGLTMADVDGLFTAS-PDDAL---WGLSVAEYLGIR----PRFV- 78 (384)
T ss_pred EEEEEeeeccceeCC-CC-CHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-CCCCC---cHHHHHHHcCCC----Ceee-
Confidence 568888876543321 11 1124467899999999999999999987642 11111 112244444332 1222
Q ss_pred ccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 346 STKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 346 s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
..-+..++++...+..+...++.|.
T Consensus 79 ----~~~~~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 79 ----DGTMIGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred ----ccccCccHHHHHHHHHHHHHHHcCC
Confidence 1124567788888888888888875
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.68 E-value=2.9 Score=41.19 Aligned_cols=98 Identities=18% Similarity=0.201 Sum_probs=56.0
Q ss_pred EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHH-HHHHHHHHhhcccCCCccee
Q 014349 266 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV-EATAIRTVFSDHATSGSLAF 344 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~-E~~a~~~~~~~~~~~~~~~v 344 (426)
+.|.|++...-+.+... ....-..+++++||+++|++++|||.+.+..+........ -...+.+..+.. ..|.
T Consensus 11 vaIvG~g~t~~~~~~~~--~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~----~~~~ 84 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLE--TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI----RKPV 84 (392)
T ss_pred eEEEEecccCCcCCCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC----CCCe
Confidence 46788877654433211 1134457899999999999999999987742211111000 111122222211 1222
Q ss_pred cccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 345 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 345 ~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
..+ +..+++|...+..+..+++.|.
T Consensus 85 ~~V-----~~~gasG~~al~~A~~~I~sG~ 109 (392)
T PRK06065 85 SRV-----YVGGATGVMTAIAGWYHVASGL 109 (392)
T ss_pred EEE-----ecCchhHHHHHHHHHHHHhCCC
Confidence 111 3357888888999999999886
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=84.28 E-value=5.3 Score=38.67 Aligned_cols=46 Identities=7% Similarity=0.163 Sum_probs=32.2
Q ss_pred EEEEeEEEecCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEE
Q 014349 266 AEVRGYGMSGDAHHITQPHID-GKGAILAMTRALKQSGLQSHQVDYVN 312 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~~~-~~~~~~a~~~al~~agl~~~dId~v~ 312 (426)
+.|.|++...-+.+... ... ..-..+++++||++|||+++|||.+.
T Consensus 4 vaIvG~g~t~~~~~~~~-~~~~~el~~eA~~~Al~DAgl~~~dID~~~ 50 (352)
T PRK07937 4 VAVVGFAQAPHVRRTDG-TTNGVEMLMPCFAELYAELGITKSDIGFWC 50 (352)
T ss_pred EEEEEeeccccccCCCC-CCcHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 45788877654432211 112 34568999999999999999999884
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.17 E-value=3.2 Score=41.45 Aligned_cols=98 Identities=14% Similarity=0.015 Sum_probs=56.9
Q ss_pred EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCH-HHH-HHHHHHhhcccCCCcce
Q 014349 266 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT-VEA-TAIRTVFSDHATSGSLA 343 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~-~E~-~a~~~~~~~~~~~~~~~ 343 (426)
+.|.|.+...-+.+...... ..-..+++++||+++||+++|||.+.+.... ...+. .-. ..+....+.
T Consensus 18 VaIvG~g~Tpfgr~~~~~~~-~eL~~eA~~~Al~dagl~~~dID~vv~~~~~-~~~~g~~~~~~~~~~~lGl-------- 87 (430)
T PRK06365 18 VYMVAAGVTKFDKASPYMDF-RERVKKAFDYAMNDAGLTLADIDGSVASYFS-DHFQRQLLAGIMVQDYLGL-------- 87 (430)
T ss_pred EEEEEeeecCccccCCCCCH-HHHHHHHHHHHHHHcCCCHHHcCEEEEeccc-ccccccchhhHHHHHhcCC--------
Confidence 56778776654432211111 2445789999999999999999997653211 11111 000 111122221
Q ss_pred ecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 344 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 344 v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
.......-+..++||...+..++..++.|.
T Consensus 88 -~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~ 117 (430)
T PRK06365 88 -VPKPSKRIEGGGATGGLAFQAGYEEIASGR 117 (430)
T ss_pred -CCCceEEEeCCcHHHHHHHHHHHHHHHcCC
Confidence 111122334568999999999999999886
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=83.27 E-value=7.4 Score=38.44 Aligned_cols=96 Identities=18% Similarity=0.087 Sum_probs=57.0
Q ss_pred EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC--CCCHHHHHHHHHHhhcccCCCcce
Q 014349 266 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP--LGDTVEATAIRTVFSDHATSGSLA 343 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~--~~D~~E~~a~~~~~~~~~~~~~~~ 343 (426)
+.|.|.+...-+.+. .....-..+++++||+++||+++|||.+... +..+ .........+...++.. .++
T Consensus 6 v~Ivg~~~t~~~r~~---~~~~~La~~A~~~Al~dAgl~~~dId~vi~~-~~~~~~~~~~~~a~~va~~lG~~----~~~ 77 (399)
T PRK06059 6 VYILGAGMHPWGKWG---RDFVEYGVVAARAALADAGLDWRDVQLVVGA-DTIRNGYPGFVAGATFAQALGWN----GAP 77 (399)
T ss_pred EEEEEecccccCCCC---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCccCCccHHHHHHHHhCCC----CCc
Confidence 457777665433321 1113445789999999999999999998742 2111 11112222344444322 122
Q ss_pred ecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 344 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 344 v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
.. .=+..+++|+..+..+..+++.|.
T Consensus 78 ~~-----~v~~~Casg~~al~~A~~~I~sG~ 103 (399)
T PRK06059 78 VS-----SSYAACASGSQALQSARAQILAGL 103 (399)
T ss_pred ee-----cccchhHHHHHHHHHHHHHHHCCC
Confidence 22 224567888888999999998875
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=83.27 E-value=3.9 Score=41.22 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceeccccc-ccchhHHhHHHHHHHHHHH
Q 014349 290 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG-AIGHLLGAAGAVEAIFAVL 368 (426)
Q Consensus 290 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~-~~Gh~~~AsG~~~l~~~~~ 368 (426)
...|++++|+++|++|+|||++.+. |.|..--+.-+.-+.+-++.+. ..+. .++..+.++|+..+-.+-.
T Consensus 152 a~~Aa~~aL~~agi~p~dId~lIv~-tst~~~~Pslaa~V~~~lGlr~--------~i~~fdL~gmGCSggl~aL~lA~~ 222 (478)
T PLN02932 152 IIGAVDNLFRNTGISPSDIGILVVN-SSTFNPTPSLSSILVNKFKLRD--------NIKSLNLGGMGCSAGVIAIDAAKS 222 (478)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-ccCCCCCCcHHHHHHHHhCCCC--------CceEEEeccchhhhHHHHHHHHHH
Confidence 4578999999999999999998764 4444333333333444444321 1222 4455666777777777777
Q ss_pred HHHhC
Q 014349 369 AIHHG 373 (426)
Q Consensus 369 ~l~~~ 373 (426)
.|+.+
T Consensus 223 ll~~~ 227 (478)
T PLN02932 223 LLQVH 227 (478)
T ss_pred HHHcC
Confidence 77765
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=82.91 E-value=3.6 Score=41.71 Aligned_cols=75 Identities=8% Similarity=0.081 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceeccccc-ccchhHHhHHHHHHHHHHH
Q 014349 290 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG-AIGHLLGAAGAVEAIFAVL 368 (426)
Q Consensus 290 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~-~~Gh~~~AsG~~~l~~~~~ 368 (426)
...|++++|+++|++|+|||++.+..+ +-.--+.-+.-+.+-++.+. ..+. .++..+.++|+..+-.+-.
T Consensus 180 ~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~~PSlaa~I~n~lGlr~--------~i~afdLsgmGCSggl~aLdlA~~ 250 (511)
T PLN02192 180 MFGAIDQLLAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRG--------NILSYNLGGMGCSAGLISIDLAKH 250 (511)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCchHHHHHHHHhCCCC--------CceEEEcccchhhhHHHHHHHHHH
Confidence 346889999999999999999987733 32222334444555454331 1122 4444556677777766666
Q ss_pred HHHhC
Q 014349 369 AIHHG 373 (426)
Q Consensus 369 ~l~~~ 373 (426)
.|+.+
T Consensus 251 lL~a~ 255 (511)
T PLN02192 251 LLQVH 255 (511)
T ss_pred HHHcC
Confidence 66654
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=81.77 E-value=9.4 Score=34.69 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-HHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D-~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
....++++++|+++|++++|||.+....+ ++..+ +.-...+...++.. +.+.. .+ ....++++..+..+
T Consensus 9 ~l~~~A~~~al~~ag~~~~~i~~li~~~~-~~~~~~~~~a~~i~~~lg~~----~~~~~----~i-~~~C~s~~~al~~A 78 (254)
T cd00327 9 ELGFEAAEQAIADAGLSKGPIVGVIVGTT-GGSGEFSGAAGQLAYHLGIS----GGPAY----SV-NQACATGLTALALA 78 (254)
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEEEC-CCCccccHHHHHHHHHhCCC----CCCcc----ee-ccHhHHHHHHHHHH
Confidence 34578999999999999999999886533 33221 22233344444431 11111 12 24566778888888
Q ss_pred HHHHHhCC
Q 014349 367 VLAIHHGV 374 (426)
Q Consensus 367 ~~~l~~~~ 374 (426)
...|+.+.
T Consensus 79 ~~~i~~g~ 86 (254)
T cd00327 79 VQQVQNGK 86 (254)
T ss_pred HHHHHCCC
Confidence 88888775
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.18 E-value=9.5 Score=37.57 Aligned_cols=100 Identities=14% Similarity=0.025 Sum_probs=54.0
Q ss_pred EEEEeEEEecCCCCCC--CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-HHHHHHHHHHhhcccCCCcc
Q 014349 266 AEVRGYGMSGDAHHIT--QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~--~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D-~~E~~a~~~~~~~~~~~~~~ 342 (426)
+.|.|.+...-+.+.. .......-..+++++||+++|++++|||.+.. |+.++.++ ......+....+.. ...
T Consensus 4 v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~-g~~~~~~~~~~~~~~~~~~~gl~---~~~ 79 (393)
T PRK05790 4 VVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIM-GQVLQAGAGQNPARQAALKAGLP---VEV 79 (393)
T ss_pred eEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEE-EEecCCCCCCcHHHHHHHHcCCC---CCC
Confidence 4567776554333211 01111344578999999999999999998864 22222111 11111111111111 011
Q ss_pred eecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 343 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 343 ~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
+.. .=+..+++|+..+..+..+++.|.
T Consensus 80 ~~~-----~v~~~Casg~~al~~A~~~I~sG~ 106 (393)
T PRK05790 80 PAL-----TINKVCGSGLKAVALAAQAIRAGD 106 (393)
T ss_pred cee-----eecccchHHHHHHHHHHHHHHcCC
Confidence 111 113367888888999999998875
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.13 E-value=10 Score=37.30 Aligned_cols=94 Identities=17% Similarity=0.043 Sum_probs=57.3
Q ss_pred EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec
Q 014349 266 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 345 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~ 345 (426)
+.|.|.+...-+.+.. .+ ...-..+++++||++|||+++|||.+...+ ... .. ....+.+.++.. ..++.
T Consensus 7 vaIvG~g~t~~~~~~~-~~-~~~L~~eA~~~Al~DAgl~~~dID~~~~~~-~~~-~~--~~~~~~~~lGl~----~~~~~ 76 (388)
T PRK08142 7 AYIVGAYEHPTRKAPD-KS-VAQLHAEVAKGALADAGLSLADVDGYFCAG-DAP-GL--GPASMVDYLGLK----LRHVD 76 (388)
T ss_pred EEEEEEeeccceeCCC-CC-HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CCC-Cc--cHHHHHHhCCCC----Ceeec
Confidence 4588888765444321 11 134467899999999999999999876532 111 11 111233333332 12222
Q ss_pred ccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 346 STKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 346 s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
. .+..++++...+..+..+++.|.
T Consensus 77 ~-----v~~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 77 S-----TETGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred c-----ccCCcHHHHHHHHHHHHHHHcCC
Confidence 2 24567888888899999999886
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=80.82 E-value=9.9 Score=37.48 Aligned_cols=79 Identities=19% Similarity=0.090 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC--CHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG--DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 365 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~--D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~ 365 (426)
.-..++++++|+++|++|+|||.|.+- +.++.+ +......+....+.. ...|...+ +..+++|+..+..
T Consensus 29 eL~~~A~~~AL~~agi~~~dID~vi~g-~~~~~~~~~~~~a~~~~~~~Gl~---~~~p~~~V-----~~aCaSg~~Al~~ 99 (394)
T PRK09051 29 DLGATVVREALARAGVDPDQVGHVVFG-HVIPTEPRDMYLSRVAAINAGVP---QETPAFNV-----NRLCGSGLQAIVS 99 (394)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEe-eeccccCCCccHHHHHHHHcCCC---CCCceEEe-----cccchHHHHHHHH
Confidence 345789999999999999999988753 332222 222222222222211 01222222 3456788888999
Q ss_pred HHHHHHhCCc
Q 014349 366 AVLAIHHGVA 375 (426)
Q Consensus 366 ~~~~l~~~~~ 375 (426)
+...++.|..
T Consensus 100 A~~~I~sG~~ 109 (394)
T PRK09051 100 AAQAILLGDA 109 (394)
T ss_pred HHHHHHcCCC
Confidence 9999988763
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=80.65 E-value=5.6 Score=39.08 Aligned_cols=79 Identities=18% Similarity=0.112 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-HHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D-~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
.-..+++++||+++|++++|||.+.+ ++.++..+ ......+....+.. ...+...+ +..+++|+..+..+
T Consensus 23 ~La~~A~~~Al~dAgl~~~dID~vv~-g~~~~~~~~~~~a~~va~~lGl~---~~~~~~~v-----~~~Casg~~al~~A 93 (386)
T TIGR01930 23 DLGAAVIKELLERNPLDPELIDDVIF-GNVLQAGEQQNIARQAALLAGLP---ESVPAYTV-----NRQCASGLQAVILA 93 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCCChHHHHHHHHcCCC---CCceeeee-----cchhhHHHHHHHHH
Confidence 34578999999999999999999876 34333222 22222232222221 11222222 24677888888889
Q ss_pred HHHHHhCCc
Q 014349 367 VLAIHHGVA 375 (426)
Q Consensus 367 ~~~l~~~~~ 375 (426)
...++.|..
T Consensus 94 ~~~I~sG~~ 102 (386)
T TIGR01930 94 AQLIRAGEA 102 (386)
T ss_pred HHHHHCCCC
Confidence 899988763
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=80.63 E-value=4.5 Score=39.98 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=56.4
Q ss_pred EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCCHHHHHHHHHHhhcccCCCccee
Q 014349 266 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAF 344 (426)
Q Consensus 266 a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~-~~D~~E~~a~~~~~~~~~~~~~~~v 344 (426)
+.|.|++...-+... ... ...-..++++++|+++||+++|||.+.+ |+... .+.......+.+.++..
T Consensus 9 v~IvG~g~tp~~~~~-~~~-~~~L~~ea~~~AL~dagl~~~dID~v~v-g~~~~~~~~~~~~~~~a~~lGl~-------- 77 (398)
T PRK06157 9 VAILGMGCTKFGERW-DAG-AEDLMVEAFLEALADAGIEPKDIDAAWF-GTHYDEIGSGKSGTPLSRALRLP-------- 77 (398)
T ss_pred eEEEEeccccccccC-CCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccccccccchhHHHHHHcCCC--------
Confidence 456676654433221 111 1344678999999999999999998765 22111 00111112233333221
Q ss_pred cccccccchhHHhHHHHHHHHHHHHHHhCCc
Q 014349 345 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVA 375 (426)
Q Consensus 345 ~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~ 375 (426)
......=+..+++|+..+..++.+++.|..
T Consensus 78 -~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~ 107 (398)
T PRK06157 78 -NIPVTRVENFCATGSEAFRGAVYAVASGAY 107 (398)
T ss_pred -CCCEEEEecccHHHHHHHHHHHHHHHCCCC
Confidence 111122355688999999999999998863
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=80.17 E-value=11 Score=37.10 Aligned_cols=79 Identities=20% Similarity=0.202 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEe-cCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNA-HATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~-hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
.-..++++++|+++|++++|||.+.+ +......+ ......+....+.. ..+|..++ +..++||+..+..+
T Consensus 27 ~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~-~~~~~~~~~~~Gl~---~~~p~~~v-----~~~caSg~~av~~A 97 (394)
T PLN02644 27 ELGSIAIQAALERAGVDPALVQEVFFGNVLSANLG-QAPARQAALGAGLP---PSTICTTV-----NKVCASGMKAVMLA 97 (394)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcC-CcHHHHHHHhcCCC---CCCceEEE-----eccchHHHHHHHHH
Confidence 44578999999999999999999875 21110101 11111122222211 11222222 34688999999999
Q ss_pred HHHHHhCCc
Q 014349 367 VLAIHHGVA 375 (426)
Q Consensus 367 ~~~l~~~~~ 375 (426)
..+++.|..
T Consensus 98 a~~I~sG~~ 106 (394)
T PLN02644 98 AQSIQLGIN 106 (394)
T ss_pred HHHHHcCCC
Confidence 999988753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 426 | ||||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 1e-175 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 4e-92 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 1e-90 | ||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 2e-89 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 2e-89 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 3e-87 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 6e-82 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 1e-80 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 7e-73 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 2e-72 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 2e-72 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 2e-72 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 9e-72 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 3e-71 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 5e-71 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 6e-68 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 8e-57 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 6e-56 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 2e-55 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 1e-49 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 1e-49 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 1e-47 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 3e-46 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 4e-45 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 5e-45 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 8e-45 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 2e-44 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 3e-44 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 3e-44 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 9e-42 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 1e-41 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 1e-41 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 2e-39 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 5e-39 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 2e-34 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 4e-30 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 1e-16 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 5e-16 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 4e-09 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 1e-08 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 7e-08 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 5e-06 |
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 650 bits (1679), Expect = 0.0
Identities = 329/424 (77%), Positives = 375/424 (88%), Gaps = 3/424 (0%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
MVTPLG G ETTWRRLI GECGIR +T +DLKM +FD ET+L+ F QL+SKVAA VP G
Sbjct: 10 MVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGS 69
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ GEF+E WL + +++A FI YA+CAADEAL DA+WLP+++ +KERTGVSIGGGIGS
Sbjct: 70 NPGEFDEALWL---NSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGS 126
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
I D V+AAQ+ICEKRLRRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSI
Sbjct: 127 ICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSI 186
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGF
Sbjct: 187 GDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGF 246
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
VIGEGSGV+VLEE EHAK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+Q
Sbjct: 247 VIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQ 306
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
SGL +Q+DYVNAHATSTP+GD VEA AI+TVFS+HATSG+LAFSSTKGA GHLLGAAGA
Sbjct: 307 SGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGA 366
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAIF++LAIHHGVAP+TLN+ PDPIF+ FMPLT SK M + A+SNSFGFGGTNASL
Sbjct: 367 VEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASL 426
Query: 421 LFTK 424
LF
Sbjct: 427 LFAS 430
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 619 bits (1598), Expect = 0.0
Identities = 219/425 (51%), Positives = 283/425 (66%), Gaps = 19/425 (4%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V+PL G E TW+RL+ GE G R +T F+ + L ++A +P G
Sbjct: 19 LVSPLASGVEETWKRLLAGESGARRVT-------EFEVD-------DLACQIACRIPVGD 64
Query: 61 SS-GEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIG 119
+ G FN D ++ K+ R + FI YA+ AAD+AL DA W P + + RTGV IG GIG
Sbjct: 65 GTNGTFNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIG 124
Query: 120 SISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
I V+A + +K RR+SPFFIP LIN+ASGHVS+K+ +GPNH+ VTACATG H+
Sbjct: 125 GIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHA 184
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
IGDAAR+I FGD+DVMVAGGTES + +S+AGF +AL+T+ N P ASRP+D RDG
Sbjct: 185 IGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDG 244
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
FV+GEG+G++VLEELEHA RGAKIYAEV GYGMSGDA HIT P G+GA M ALK
Sbjct: 245 FVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALK 304
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359
++G+ ++DY+NAH TST DT+E A+ V + A ++ SSTK +IGHLLGAAG
Sbjct: 305 RAGIVPDEIDYINAHGTSTM-ADTIELGAVERVVGEAAA--KISMSSTKSSIGHLLGAAG 361
Query: 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419
A EA+F+ LAI +AP TLNL P + +P ++ I ALSNSFGFGGTNAS
Sbjct: 362 AAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPHKP-RERKIDVALSNSFGFGGTNAS 420
Query: 420 LLFTK 424
L+ +
Sbjct: 421 LVLRR 425
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 619 bits (1598), Expect = 0.0
Identities = 207/427 (48%), Positives = 275/427 (64%), Gaps = 22/427 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+VTPLG G W RLI GE GI + + + + VAA VP G
Sbjct: 30 LVTPLGVGTHLVWDRLIGGESGIVSLV-------GEEYK-------SIPCSVAAYVPRGS 75
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
G+FNE ++++ D +S++ A+ AA+ A+ D+ W P + + TGV+IG G+
Sbjct: 76 DEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIP 135
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + A K ++SPFF+P+IL+NMA+G VS++Y +GPNHA TAC TGAH++
Sbjct: 136 LEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAV 195
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF RDGF
Sbjct: 196 GDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGF 253
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+ VLVLEE EHA +R A+IYAEV GYG+SGDA HIT P +G+GA+ M ALK
Sbjct: 254 VMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKD 313
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+Q ++ Y+NAHATSTPLGD E AI+ +F DHA +LA SSTKGA GHLLGAAGA
Sbjct: 314 AGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAY--ALAVSSTKGATGHLLGAAGA 371
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISA---ALSNSFGFGGTN 417
VEA F LA ++ P TLNL +P F+ N++PL A ++ L+NSFGFGGTN
Sbjct: 372 VEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKA-QEWKTEKRFIGLTNSFGFGGTN 430
Query: 418 ASLLFTK 424
A+L
Sbjct: 431 ATLCIAG 437
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 617 bits (1593), Expect = 0.0
Identities = 194/427 (45%), Positives = 267/427 (62%), Gaps = 21/427 (4%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVP--C 58
+V+PLGCG E W+RLI G G+R + + +L++KV V
Sbjct: 33 IVSPLGCGKELVWQRLIGGGSGLRRLG-------DDIAG-------ELSAKVGGTVQDVA 78
Query: 59 GISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGI 118
G F+ + + K+ R + RFI A+ AADEAL +A W P + Q+ERT + GI
Sbjct: 79 EDPEGGFDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGI 138
Query: 119 GSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAH 178
G +A ++ + +RRLSPF IP L N+A+G +S+K+ F+GP VTACA
Sbjct: 139 GGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQ 198
Query: 179 SIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238
+IGDA RMI+ G++DV++AGG E++ D +S+ GF +RAL+T ++ P ASRPFD RD
Sbjct: 199 AIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRD 258
Query: 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRAL 298
GFV+GEG+ ++V+E L+HA RGA+ AE+ GYG + DA+H+T DG GA+ AM AL
Sbjct: 259 GFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLAL 318
Query: 299 KQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAA 358
+ + QVDYVNAHATSTP+GD E A++TVF A A SSTK A GHLLGAA
Sbjct: 319 RMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGA---GPAISSTKSATGHLLGAA 375
Query: 359 GAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND-NFMPLTASKDMPISAALSNSFGFGGTN 417
GA+EA F++LA+ GV P TLNL PDP + + + A + +P+ ALSN FGFGG N
Sbjct: 376 GAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAA-RHVPVEIALSNGFGFGGVN 434
Query: 418 ASLLFTK 424
AS+LF +
Sbjct: 435 ASVLFRR 441
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 582 bits (1503), Expect = 0.0
Identities = 138/424 (32%), Positives = 211/424 (49%), Gaps = 27/424 (6%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
M T L AETTW+ L+ + GIR + + FD L ++ +
Sbjct: 37 MTTALATDAETTWKLLLDRQSGIRTLDDPFV--EEFD----------LPVRIGGHLL--- 81
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
D L + R + + + +A D R VSIG G+GS
Sbjct: 82 ----EEFDHQLTRIELRRMGYLQRMSTVLSRRLWENAGSPEVD---TNRLMVSIGTGLGS 134
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ V + + + ++ +SP + + + N A+ V ++ + V+ACA+GA +I
Sbjct: 135 AEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAI 194
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
A + I G++D + GG E+ I+A+ +AGF + R + + N P A RPFD RDGF
Sbjct: 195 ARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGF 254
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V GEG +L++E EHAK RGA I A + G ++ D H+ P +G+ A A+TRA++
Sbjct: 255 VFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQL 314
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+GL +D+VNAHAT T +GD E AI + A + K A+GH +GA GA
Sbjct: 315 AGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNR----PAVYAPKSALGHSVGAVGA 370
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VE+I VLA+ V P TLNL DP + + + + A++NSFGFGG N ++
Sbjct: 371 VESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEP-RPGNYRYAINNSFGFGGHNVAI 429
Query: 421 LFTK 424
F +
Sbjct: 430 AFGR 433
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 578 bits (1492), Expect = 0.0
Identities = 144/424 (33%), Positives = 214/424 (50%), Gaps = 29/424 (6%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
T + E+TW+ L+ GE GI + + L K+ +
Sbjct: 21 ATTSISPDIESTWKGLLAGESGIHALE-------DEFVTKW-----DLAVKIGGHLK--- 65
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
DS + D R ++ + A D +R V +G G+G
Sbjct: 66 ----DPVDSHMGRLDMRRMSYVQRMGKLLGGQLWESAGSPEVD---PDRFAVVVGTGLGG 118
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
V++ ++ R++SP + I+ N A+ + ++ G + V+AC++G+ +I
Sbjct: 119 AERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAI 178
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
A R I GD+DV V GG E I+AL +A F RA++T+ N P+ ASRPFD RDGF
Sbjct: 179 AHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPERASRPFDKDRDGF 237
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V GE ++++E EHAK RGAK A + G G++ DA H+ P DG A AMTR+L+
Sbjct: 238 VFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLEL 297
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+GL +D+VNAH T+TP+GD EA AIR D A A + K A+GH +GA GA
Sbjct: 298 AGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQA-----AVYAPKSALGHSIGAVGA 352
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
+E++ VL + GV P TLN PDP + + + + A++NSFGFGG N +L
Sbjct: 353 LESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEP-RYGDYRYAVNNSFGFGGHNVAL 411
Query: 421 LFTK 424
F +
Sbjct: 412 AFGR 415
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 570 bits (1471), Expect = 0.0
Identities = 185/424 (43%), Positives = 268/424 (63%), Gaps = 24/424 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
M++P+G E+TW+ L+ G+ GI I +FD +K A +V
Sbjct: 27 MLSPVGNTVESTWKALLAGQSGISLID-------HFDTS-------AYATKFAGLVK--- 69
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+FN + ++ K+ R + FI Y + A +A+ D+ +++ R G +IG GIG
Sbjct: 70 ---DFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-NATRIGAAIGSGIGG 125
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + + R++SPFF+P ++NM +GH+++ YG +GP+ + TA +G H+I
Sbjct: 126 LGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNI 185
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G AAR+I +GD+DVMVAGG E + L + GF +RAL+T+ N PQ ASRP+D RDGF
Sbjct: 186 GHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGF 244
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+G+G+G+LVLEE EHAKKRGAKIYAE+ G+GMS DA+H+T P +G GA LAM AL+
Sbjct: 245 VLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRD 304
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+++ Q+ YVNAH TSTP GD EA A++T+F + A+ + SSTK GHLLGAAGA
Sbjct: 305 AGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAAS--RVLVSSTKSMTGHLLGAAGA 362
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VE+I+++LA+ P T+NL PD + +F+P A + + L NSFGFGGTN SL
Sbjct: 363 VESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSL 422
Query: 421 LFTK 424
+F K
Sbjct: 423 IFKK 426
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 567 bits (1463), Expect = 0.0
Identities = 207/424 (48%), Positives = 273/424 (64%), Gaps = 27/424 (6%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+TP+G G E + + G+ G+R IT FD L ++AA V
Sbjct: 11 ALTPIGVGQEAFHKAQLAGKSGVRPIT-------RFDAS-------ALPVRIAAEVD--- 53
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ ++L+ K+ R + RF+ YAL AA AL DA P D ER G +G GIG
Sbjct: 54 ----VDPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDL-DPERVGTLVGTGIGG 108
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ +++ E+ R+SPFFIP ++ NMAS H++M+YGF GP+ VTACATGA ++
Sbjct: 109 METWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADAL 168
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G A RMIQ G++D+++AGGTE++I +++ F RAL+T+ N P++ASRPF RDGF
Sbjct: 169 GSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASRPFTLSRDGF 227
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+GVLVLE EHAKKRGA+IYAE+ G+G S DAHHIT+PH +GKGA LAM RALK
Sbjct: 228 VMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKD 287
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G+ QV Y+NAH TSTP+GD E AI+ VF DHA L SSTK IGHLLGAAGA
Sbjct: 288 AGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAK--RLMVSSTKSMIGHLLGAAGA 345
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAI V A++HGV P T+NL PDP + +F+P ++ + ALSNSF FGG NA L
Sbjct: 346 VEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPREAKVDYALSNSFAFGGHNAVL 403
Query: 421 LFTK 424
F +
Sbjct: 404 AFKR 407
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 566 bits (1462), Expect = 0.0
Identities = 179/424 (42%), Positives = 261/424 (61%), Gaps = 26/424 (6%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
VTP+G AET+W G G+ ++T + + K+AA +
Sbjct: 13 AVTPIGNDAETSWENAKKGVNGVAKMT-------RLNPD-------DFPVKIAAELK--- 55
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F+ + +L K+ R + RF YA+ +A+ A+ D+ + D R GV IG GIG
Sbjct: 56 ---DFDVEKYLEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDS-NANRVGVWIGSGIGG 111
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ ++ + RR+SPFF+P ++ +M SG VS+++G +G N VTACAT +SI
Sbjct: 112 METFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSI 171
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA ++I+ GD+D M+ GG E+ I +S+AGF ++AL+ N P+ A RPFD RDGF
Sbjct: 172 GDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL--NPDPETACRPFDKDRDGF 229
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
+IGEG+G+++LEE EHAK RGAKIYAE+ GYG +GDA+HIT P +G+GA AM A+
Sbjct: 230 IIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDD 289
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+GL +VDY+NAH TSTP D E AI+TVF +HA LA SSTK GH LGA+G
Sbjct: 290 AGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAK--KLAISSTKSMTGHTLGASGG 347
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
+EAIFA+L I + T++L D + + +++P A ++ ++ +SNSFGFGG NA+L
Sbjct: 348 IEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEA-REANVNVVISNSFGFGGHNATL 406
Query: 421 LFTK 424
+F +
Sbjct: 407 VFKR 410
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 565 bits (1460), Expect = 0.0
Identities = 181/424 (42%), Positives = 254/424 (59%), Gaps = 25/424 (5%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+TP+G + W+ L+ G GI IT FD + V
Sbjct: 16 AITPIGNTLQDYWQGLMEGRNGIGPIT-------RFDAS-------DQACRFGGEVK--- 58
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F+ +L+ K+ + + RF +A+CA+ +A++DAK + ++ + GV IG GIG
Sbjct: 59 ---DFDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKLVINEL-NADEIGVLIGTGIGG 114
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ D ++ +K R SPF IP ++ NMASG ++ G +GPN+ VTACA G+++I
Sbjct: 115 LKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAI 174
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA R++Q G + M+ GGTE++I LS AGF +RAL+ + N P ASRPFD RDGF
Sbjct: 175 GDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHASRPFDKDRDGF 233
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEGSG+L+LEELE A RGAKIY E+ GY M+ DA+HIT P DG+GA A+ ALK
Sbjct: 234 VMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKD 293
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
SGL+ V Y+NAH TSTP D E AI+ +HA ++A SSTK GHLLG +G
Sbjct: 294 SGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAY--NIAVSSTKSMTGHLLGGSGG 351
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
+EA+ V+AI P T+NL PDP + +++P + + + + ALSNSFGFGG N +L
Sbjct: 352 IEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQS-RALIVDVALSNSFGFGGHNVTL 410
Query: 421 LFTK 424
F K
Sbjct: 411 AFKK 414
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 566 bits (1461), Expect = 0.0
Identities = 172/424 (40%), Positives = 232/424 (54%), Gaps = 29/424 (6%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+ +P+G E W L G+ GI IT FD AA +
Sbjct: 32 VTSPIGNTPEEFWNSLATGKIGIGGIT-------KFDHS-------DFDVHNAAEIQ--- 74
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F D + KD + YAL AA EA++ A ++R GV + GIG
Sbjct: 75 ---DFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEAL-NRDRFGVIVASGIGG 130
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
I + D + EK +R+ P +P+ L NMASG+V+M++G G + TAC++ +I
Sbjct: 131 IKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAI 190
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA R I+FG DVM+ GGTE+SI ++AGF AL+T P AS PFD R+GF
Sbjct: 191 GDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGF 248
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEGSG+LVLE LEHA+KRGA I AEV GYG + DA+H+T PH +G+GAI A+ AL++
Sbjct: 249 VMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEE 308
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+ + QV YVNAH TSTP + E+ AI V + SSTK GHLLGAAGA
Sbjct: 309 AEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE-----VPVSSTKSFTGHLLGAAGA 363
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
VEAI + A+ H P+T ++ N + + I A+SN+FGFGG NA L
Sbjct: 364 VEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQG-LEKEIPYAISNTFGFGGHNAVL 422
Query: 421 LFTK 424
F +
Sbjct: 423 AFKR 426
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 564 bits (1457), Expect = 0.0
Identities = 135/427 (31%), Positives = 208/427 (48%), Gaps = 30/427 (7%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
VT LG + L G +R + ++D F L +++AA +P
Sbjct: 15 GVTALGSRWDEIEAALKAGRNAVRRMP-------DWD------YFESLHTRLAAPLP--- 58
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
F + + K RS+ R YA+ A++ AL DA + + R GV+ G GS
Sbjct: 59 ---GFAQPADWPRKKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGS 115
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ M+ + ++ +++ + + +VS+ + +G +ACA+G+ +I
Sbjct: 116 VEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAI 175
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G A I G +M+AGG E ++A F A +T+ N P RPFD RDG
Sbjct: 176 GYAYENIAMGKQTLMLAGGAEELS-GPAVAVFDTLYATSTR-NDEPHLTPRPFDAKRDGL 233
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+ LVLEE EHAK RGA I+AE+ G+G + D H+TQP AM AL+
Sbjct: 234 VVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALED 291
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+ L ++ + YVNAH TST GD E+ A F + + SS K +GH LGA GA
Sbjct: 292 AKLDANAIAYVNAHGTSTDRGDVAESQATARTFGER-----MPISSLKSYVGHTLGACGA 346
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFND-NFMPLTASKDMPISAALSNSFGFGGTNAS 419
+EA + + + TLNL + DP +++ A + + +SN+F FGG N S
Sbjct: 347 LEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIRGEA-RAIDAEYVMSNNFAFGGINTS 405
Query: 420 LLFTKCQ 426
L+F + +
Sbjct: 406 LIFRRVR 412
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 565 bits (1458), Expect = 0.0
Identities = 182/424 (42%), Positives = 258/424 (60%), Gaps = 26/424 (6%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
++P+G +TTW + G GI +IT D E + +A +
Sbjct: 37 ALSPIGNDVKTTWENALKGVNGIDKIT-------RIDTE-------PYSVHLAGELK--- 79
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
FN + ++ K+ R + RF YA+ AA EA+ DA+ ++ +R GV IG GIG
Sbjct: 80 ---NFNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINEN-TADRIGVWIGSGIGG 135
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ A + + +K RR+SPFF+P ++ +MA+G VS+ G +GPN A VTACATG +SI
Sbjct: 136 METFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSI 195
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G+A +++Q GD+D M+ GGTE+ I +++AGF SRAL+T N + A RPF GRDGF
Sbjct: 196 GEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIETACRPFQEGRDGF 253
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
V+GEG+G+LV+E LE A+ RGA IYAE+ GYG +GDA+HIT P +G+G AM A+
Sbjct: 254 VMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDD 313
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
+G++ V Y+NAH TSTP+GD E AI+ F + A L SSTK GHLLGA G
Sbjct: 314 AGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAK--HLKVSSTKSMTGHLLGATGG 371
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASL 420
+EAIF+ L+I T++ PDP + + +P A +D+ I+ A+SNS GFGG NA L
Sbjct: 372 IEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEA-QDLDITYAMSNSLGFGGHNAVL 430
Query: 421 LFTK 424
+F K
Sbjct: 431 VFKK 434
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 552 bits (1424), Expect = 0.0
Identities = 143/425 (33%), Positives = 210/425 (49%), Gaps = 33/425 (7%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V+ +G + L G GI + S V V
Sbjct: 11 IVSSIGNNQQEVLASLREGRSGITFSQ-------ELKDS-------GMRSHVWGNVK--- 53
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ ++ K R ++ YA + ++A+ DA P R G+ G G GS
Sbjct: 54 ----LDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGS 109
Query: 121 ISDTVDAAQ-MICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
V A M + L+ + P+ + + + + S ++ + G N++ +ACAT AH
Sbjct: 110 PRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHC 169
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
IG+A IQ G D++ AGG E ++ F AL+TKYN TP++ASR +D RDG
Sbjct: 170 IGNAVEQIQLGKQDIVFAGGGEELCWEMAC-EFDAMGALSTKYNDTPEKASRTYDAHRDG 228
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
FVI G G++V+EELEHA RGA IYAE+ GYG + D + P G+GA+ M A+
Sbjct: 229 FVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMH 286
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359
+DY+N+H TSTP+GD E AIR VF D + A S+TK GH LGAAG
Sbjct: 287 GVDT---PIDYLNSHGTSTPVGDVKELAAIREVFGDKS----PAISATKAMTGHSLGAAG 339
Query: 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419
EAI+++L + HG ++N+ + D + D ++ +SNSFGFGGTNA+
Sbjct: 340 VQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTET-TDRELTTVMSNSFGFGGTNAT 398
Query: 420 LLFTK 424
L+ K
Sbjct: 399 LVMRK 403
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 548 bits (1414), Expect = 0.0
Identities = 148/425 (34%), Positives = 218/425 (51%), Gaps = 32/425 (7%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V+ +G E L + GI + +V
Sbjct: 32 IVSSIGSNTEEVTASLREAKSGISRAE-------EYAEL-------GFRCQVHGAP---- 73
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ + +S ++ + R R A+ A D+A+ DA + ERTG+ +G G S
Sbjct: 74 ---DIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEV-SNERTGIIMGSGGPS 129
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
VD+A + EK +R+ PF +P+ + + AS ++ + +G N++ +ACAT H I
Sbjct: 130 TRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCI 189
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G+A MIQ+G D M AGG E LS+ F A+++KYN TP ASR +D RDGF
Sbjct: 190 GNAYEMIQYGKQDRMFAGGCEDLDWTLSV-LFDAMGAMSSKYNDTPSTASRAYDKNRDGF 248
Query: 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300
VI G+GVLVLE+LE A RGAKIY E+ GYG + D + + P G+GAI M AL
Sbjct: 249 VIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALST 306
Query: 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360
++DY+N HATSTP GD E AIR +F ++TK GH LGA G
Sbjct: 307 VT---SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDV--CPPIAATKSLTGHSLGATGV 361
Query: 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFND-NFMPLTASKDMPISAALSNSFGFGGTNAS 419
EAI+++L + + + ++ + DP F D + ++ ++ LSNSFGFGGTNA+
Sbjct: 362 QEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRI-DNVQLNTVLSNSFGFGGTNAT 420
Query: 420 LLFTK 424
L+F +
Sbjct: 421 LVFQR 425
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 542 bits (1400), Expect = 0.0
Identities = 128/430 (29%), Positives = 198/430 (46%), Gaps = 31/430 (7%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+ P G G W L G R I+ FD S+VAA
Sbjct: 12 VRAPGGNGTRQFWELLTSGRTATRRIS-------FFDPS-------PYRSQVAAEAD--- 54
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
++ + R +A+ A EA + L D R GVS+G + +
Sbjct: 55 ---FDPVAEGFGPRELDRMDRASQFAVACAREAFAASG-LDPDTLDPARVGVSLGSAVAA 110
Query: 121 ISDTVDAAQMICEK------RLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACA 174
+ ++ + LS ++ ++ V+ G +GP T C
Sbjct: 111 ATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCT 170
Query: 175 TGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 234
+G S+G+A R I+ G +DVM AG ++ I + +A F RA T + N P+ ASRPFD
Sbjct: 171 SGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR-NDDPEHASRPFD 229
Query: 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAM 294
RDGFV+ EG+ + VLE+ + A RGA+I+AE+ GY +A+H+T DG+ +
Sbjct: 230 GTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETI 289
Query: 295 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHL 354
AL +S + +DY+NAH + T D E A + +HA SS K +GH
Sbjct: 290 RVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHAR--RTPVSSIKSMVGHS 347
Query: 355 LGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFG 414
LGA G++E VLA+ HGV P T NL DP + +++PL A ++ + + L+ GFG
Sbjct: 348 LGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEA-RERKLRSVLTVGSGFG 406
Query: 415 GTNASLLFTK 424
G ++++
Sbjct: 407 GFQSAMVLRD 416
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 535 bits (1382), Expect = 0.0
Identities = 100/425 (23%), Positives = 167/425 (39%), Gaps = 33/425 (7%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V P G G W ++ G G+ +T FD + + +A +
Sbjct: 18 VVAPNGLGLAPYWSAVLDGRHGLGPVT-------RFDVS-------RYPATLAGQID--- 60
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F+ + + AL AAD AL DAK P GV G
Sbjct: 61 ---DFHAPDHIPGRLLPQTDPSTRLALTAADWALQDAKADPESL-TDYDMGVVTANACGG 116
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
T + + + + +S + + +G +S+++G +GP+ A V A G ++
Sbjct: 117 FDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDAL 176
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G A R I+ G + ++V+GG +S++D S ++T P A PFD G+
Sbjct: 177 GHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST--ATDPDRAYLPFDERAAGY 233
Query: 241 VIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
V GEG +LVLE+ A+ RG Y E+ G + D + G A+ AL
Sbjct: 234 VPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGR---PAGLERAIRLALN 290
Query: 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359
+G VD V A P D EA AI VF + + K G L G
Sbjct: 291 DAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREG----VPVTVPKTTTGRLYSGGG 346
Query: 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419
++ + A++++ GV T + + + + + AL + G G N++
Sbjct: 347 PLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEP-RSTAPRTALVLARGRWGFNSA 405
Query: 420 LLFTK 424
+ +
Sbjct: 406 AVLRR 410
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 414 bits (1065), Expect = e-131
Identities = 75/452 (16%), Positives = 134/452 (29%), Gaps = 67/452 (14%)
Query: 10 ETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 69
T + G P+ L+ FDR VA +P G +N +
Sbjct: 959 PETGEYSVKLLKGATLYIPKALR---FDR------------LVAGQIPTG-----WNAKT 998
Query: 70 WLNS-KDHRSIARFIAYALCAADEALHDAKWLPS----DQGQKERTGVSIGGGIGSISDT 124
+ S + + L + EA + G G G+G +S
Sbjct: 999 YGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSAL 1058
Query: 125 VDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAA 184
+ + + + M++ + GP V ACAT S+
Sbjct: 1059 RGMFKDRFKDE-PVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGV 1117
Query: 185 RMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT-----KYNGTPQEASRPFDCGRDG 239
I G + + + GG + + F +A + ++ TP E SRP R+G
Sbjct: 1118 ETILSGKARICIVGGYDDFQE-EGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNG 1176
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
F+ +G+G+ ++ + + A K G IY V + D + P GKG +
Sbjct: 1177 FMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPA-PGKGILTTAREHHS 1235
Query: 300 QSGLQS------------------------HQVDYVNAHATSTPLGDTVEATAIRTVFSD 335
S ++++ + A P D E RT
Sbjct: 1236 SVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIH 1295
Query: 336 HATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL 395
+ + + G+ A +G+ D
Sbjct: 1296 NEAESQ--LRAAQQQWGNDFYKRDPRIAPLRGALATYGLTI-------DDLGVASFHGTS 1346
Query: 396 TASKDMPISAALSNSFG-FGGTNASLLFTKCQ 426
T + D SA ++ G + + + Q
Sbjct: 1347 TKANDKNESATINEMMKHLGRSEGNPVIGVFQ 1378
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 1e-59
Identities = 49/262 (18%), Positives = 75/262 (28%), Gaps = 11/262 (4%)
Query: 168 AAVTACATGAHSIGDAARMIQ--FGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 225
+ A + D G + A SS+ S K R
Sbjct: 1199 VPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREA 1258
Query: 226 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 285
+ + + E + ++ E +R +I+ E +
Sbjct: 1259 QIKDWVENELE---ALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAA-QQQWGNDFY 1314
Query: 286 DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS--GSLA 343
I + AL GL + + H TST D E+ I + S +
Sbjct: 1315 KRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVI 1374
Query: 344 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP---IFNDNFMPLTASKD 400
K GH GAAGA A+ ++ G+ P N D F P K
Sbjct: 1375 GVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKT 1434
Query: 401 MPISAALSNSFGFGGTNASLLF 422
+ A SFGFG +
Sbjct: 1435 DGVRAVSITSFGFGQKGGQAIV 1456
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 337 bits (865), Expect = e-104
Identities = 70/375 (18%), Positives = 115/375 (30%), Gaps = 45/375 (12%)
Query: 10 ETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 69
T + + G + Q VA +P G ++
Sbjct: 1133 PETGQYTVRLRKGAT-LLIPK--------------ALQFDRLVAGQIPTG-----WDARR 1172
Query: 70 WLNSKDH-RSIARFIAYALCAADEALHDAKWLPSDQGQK----ERTGVSIGGGIGSISDT 124
+ +D + + Y L + EAL + + K G IG G+G S
Sbjct: 1173 YGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSAL 1232
Query: 125 VDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAA 184
+ + + MA+ + GP V ACAT S+
Sbjct: 1233 RGMYKDRYLDK-PVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGY 1291
Query: 185 RMIQFGDSDVMVAGG-----TESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
I G + V + GG E S + +M ++ + P E SRP R+G
Sbjct: 1292 DTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFAR-GREPGEMSRPTSTTRNG 1350
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 299
F+ +G GV V+ + A + G IY V + D + P G+G +
Sbjct: 1351 FMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPA-PGQGVLTTAREKSG 1409
Query: 300 QSGLQSHQVDY-----------VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK 348
+ Y + S L E AI++ S+ + +
Sbjct: 1410 NFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDET-AYLR 1468
Query: 349 GAIGHLLGAAGAVEA 363
H+ A EA
Sbjct: 1469 ERTEHIEREARRQEA 1483
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 161 bits (408), Expect = 4e-43
Identities = 40/182 (21%), Positives = 59/182 (32%), Gaps = 6/182 (3%)
Query: 245 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 304
+E + ++R I E R + I + AL GL
Sbjct: 1455 SEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRD-SRIAPLRGALATWGLT 1513
Query: 305 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG--SLAFSSTKGAIGHLLGAAGAVE 362
+ + H TST D E+ I + ++ K GH GAAGA
Sbjct: 1514 IDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWM 1573
Query: 363 AIFAVLAIHHGVAPLTLNLAKPDP---IFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419
+ ++ G+ P N D F+ P + K I A SFGFG A
Sbjct: 1574 LNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQ 1633
Query: 420 LL 421
+
Sbjct: 1634 AI 1635
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 309 bits (792), Expect = 4e-94
Identities = 70/415 (16%), Positives = 128/415 (30%), Gaps = 52/415 (12%)
Query: 47 QLTSKVAAVVPCGISSGEFNEDSWLNS-KDHRSIARFIAYALCAADEALHDAKWLPS--- 102
+ VA +P G +N ++ S + + L + EA +
Sbjct: 1180 RFDRLVAGQIPTG-----WNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEM 1234
Query: 103 -DQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161
G G G+G +S + + + + M++ +
Sbjct: 1235 YKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDE-PVQNDILQESFINTMSAWVNMLLIS 1293
Query: 162 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT- 220
GP V ACAT S+ I G + + + GG + + F +A +
Sbjct: 1294 SSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE-EGSFEFGNMKATSNT 1352
Query: 221 ----KYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGD 276
++ TP E SRP R+GF+ +G+G+ ++ + + A K G IY V + D
Sbjct: 1353 LEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATD 1412
Query: 277 AHHITQPHIDGKGAILAMTRALKQSGLQS------------------------HQVDYVN 312
+ P GKG + S ++++ +
Sbjct: 1413 KIGRSVPA-PGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALK 1471
Query: 313 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHH 372
A P D E RT + + S ++ + + + LA
Sbjct: 1472 LEAEEIPSEDQNEFLLERTREIHNE-AESQLRAAQQQWGNDFYKRDPRIAPLRGALA--- 1527
Query: 373 GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFG-FGGTNASLLFTKCQ 426
T L D T + D SA ++ G + + + Q
Sbjct: 1528 -----TYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQ 1577
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 5e-44
Identities = 49/262 (18%), Positives = 75/262 (28%), Gaps = 11/262 (4%)
Query: 168 AAVTACATGAHSIGDAARMIQ--FGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 225
+ A + D G + A SS+ S K R
Sbjct: 1398 VPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREA 1457
Query: 226 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 285
+ + + E + ++ E +R +I+ E +
Sbjct: 1458 QIKDWVENELE---ALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRA-AQQQWGNDFY 1513
Query: 286 DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATS--GSLA 343
I + AL GL + + H TST D E+ I + S +
Sbjct: 1514 KRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVI 1573
Query: 344 FSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP---IFNDNFMPLTASKD 400
K GH GAAGA A+ ++ G+ P N D F P K
Sbjct: 1574 GVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKT 1633
Query: 401 MPISAALSNSFGFGGTNASLLF 422
+ A SFGFG +
Sbjct: 1634 DGVRAVSITSFGFGQKGGQAIV 1655
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 2e-39
Identities = 66/276 (23%), Positives = 109/276 (39%), Gaps = 22/276 (7%)
Query: 151 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 210
M + +S + F+GP+ TAC++ ++ A + I+ G+ V GG + S
Sbjct: 139 MMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSL 198
Query: 211 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 270
F K L+ R FD G+ E ++L + A++ +YA +
Sbjct: 199 QFMKLGMLS------QDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLARR----VYATILN 248
Query: 271 YGMSGDAHH---ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEAT 327
G + D +T P G + +G ++Y+ AH T T +GD E
Sbjct: 249 AGTNTDGSKEQGVTFP--SGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELN 306
Query: 328 AIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP- 386
I L STK +GH A+G I +L++ HGV L+ P+P
Sbjct: 307 GIVNALCATRREP-LLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPE 365
Query: 387 --IFNDNFMPL--TASKDMPISAALSNSFGFGGTNA 418
D + + + ++ SFGFGG+N
Sbjct: 366 IPALQDGRLQVVDRPLPIRGGNVGIN-SFGFGGSNV 400
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 2e-36
Identities = 86/279 (30%), Positives = 131/279 (46%), Gaps = 20/279 (7%)
Query: 151 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 210
+ASG V+ G +GP TAC++G ++ A ++ + + +AGG +
Sbjct: 177 VASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFT 236
Query: 211 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 270
F L +PF DGF + EG+GVLVL+ L A++ G + A +RG
Sbjct: 237 EFRSQGGLA------ADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRG 290
Query: 271 YGMSGDAHH--ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATA 328
++ D +T P G + RAL+ +G+++ VDYV AH T T LGD +E A
Sbjct: 291 SAVNQDGASNGLTAPS--GPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHA 348
Query: 329 IRTVF-SDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 387
+ + + ++ L S K IGH AAG + AVLA+ HG P TL+ +P P
Sbjct: 349 LLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQ 408
Query: 388 FN---DNFMPLTASKDMPIS-----AALSNSFGFGGTNA 418
++ ++ P A +S SFG GTNA
Sbjct: 409 IEWDLGAVSVVSQARSWPAGERPRRAGVS-SFGISGTNA 446
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 7e-36
Identities = 86/279 (30%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 151 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 210
+ASG +S G +GP+ + TAC++ ++ A ++ G+S + V GG
Sbjct: 155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFV 214
Query: 211 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 270
F + RAL S+ F G DGF EG +++LE L A++ G ++ A VRG
Sbjct: 215 DFSRQRALA------ADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRG 268
Query: 271 YGMSGD--AHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATA 328
++ D ++ ++ P G + +AL+ GL+ VD V AH T T LGD +EA A
Sbjct: 269 SALNQDGASNGLSAPS--GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANA 326
Query: 329 IRTVF-SDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 387
+ + D L S K IGH AAG + VLA+ +G P TL++ +P P
Sbjct: 327 LLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPH 386
Query: 388 FN---DNFMPLTASKDMPIS-----AALSNSFGFGGTNA 418
+ L ++ AA+S +FG GTNA
Sbjct: 387 VDWSSGGVALLAGNQPWRRGERTRRAAVS-AFGISGTNA 424
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-28
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 28/279 (10%)
Query: 151 MASGHVSMKYGFQGPNHAAV---TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL 207
M + +S + F+GP ++ TAC++ ++ +A + I G + GG +
Sbjct: 141 MMANRLSFFFDFRGP---SIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPN 197
Query: 208 SMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAE 267
+ F + L+ P+ + FD +G+ EG ++L + A++ +YA
Sbjct: 198 TSVQFLRLGMLS------PEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLARR----VYAT 247
Query: 268 VRGYGMSGDAHH---ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV 324
+ G + D +T P G + + +G+ +Y+ AH T T +GD
Sbjct: 248 ILNAGTNTDGFKEQGVTFPS--GDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQ 305
Query: 325 EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 384
E I L STK +GH A+G +L++ HG+ L+ P
Sbjct: 306 ELNGITRALCATRQEP-LLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSP 364
Query: 385 DP---IFNDNFMPL--TASKDMPISAALSNSFGFGGTNA 418
+P D + + + ++ SFGFGG+N
Sbjct: 365 NPEIPALLDGRLQVVDQPLPVRGGNVGIN-SFGFGGSNV 402
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 6e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C +G ++ AAR I G+ V + G ES
Sbjct: 89 CGSGLEAVAQAARAIWAGEGKVYIGSGVES 118
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C + ++ AA+ I G+ DV V GG E
Sbjct: 94 CGSSMSALHTAAQAIMTGNGDVFVVGGVEH 123
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C + ++ DAARMI GD+ V + GG E
Sbjct: 91 CGSSMQALHDAARMIMTGDAQVCLVGGVEH 120
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 4e-05
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 26/126 (20%)
Query: 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 301
I +G+ +VL + A KRG A + + G P I G G I A+ +A+ ++
Sbjct: 254 INDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVE-----PSIMGIGPIPAIKQAVTKA 308
Query: 302 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHL 354
G VD + EA A + A L + K GAI GH
Sbjct: 309 GWSLEDVDIFEIN----------EAFAAVSA----AIVKELGLNPEKVNIEGGAIALGHP 354
Query: 355 LGAAGA 360
LGA+G
Sbjct: 355 LGASGC 360
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 4e-04
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C +G ++ A + I GDS ++VAGG E+
Sbjct: 92 CGSGLKAVCLAVQSIGIGDSSIVVAGGMEN 121
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 4e-05
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 26/126 (20%)
Query: 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 301
+ +G+ LVL + AK+ A + + + P + A + LK
Sbjct: 254 LNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVE-----PIDFPIAPVYAASMVLKDV 308
Query: 302 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHL 354
GL+ + + EA ++ + A L K GA+ GH
Sbjct: 309 GLKKEDIAMWEVN----------EAFSLVVL----ANIKMLEIDPQKVNINGGAVSLGHP 354
Query: 355 LGAAGA 360
+G +GA
Sbjct: 355 IGMSGA 360
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 7e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C++G ++ D A I+ G D+ +A G ES
Sbjct: 101 CSSGLTAVNDIANKIKVGQIDIGLALGVES 130
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 8e-05
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C++G +I AA IQ G S+V+VAGG E+
Sbjct: 91 CSSGMQAIMSAAMQIQLGVSEVVVAGGVEA 120
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 26/123 (21%)
Query: 245 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 304
GS VLVL E AK++G + A + GY ++G P I G G A+ + L++
Sbjct: 254 GSAVLVLMSEEKAKEKGLQPLARIVGYSVAG-----VDPKIMGIGPAPAIRKGLEKVDWS 308
Query: 305 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHLLGA 357
D + + EA A + + A L K + GH +G
Sbjct: 309 LEDADLLEIN----------EAFAAQYL----AVEKELDLDREKVNVNGSGVGLGHPIGC 354
Query: 358 AGA 360
GA
Sbjct: 355 TGA 357
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 9e-05
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C +G S+ A+++I GD+D+M+ GG E+
Sbjct: 93 CGSGLRSVSMASQLIALGDADIMLVGGAEN 122
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 26/123 (21%)
Query: 245 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 304
G+ +LV+ E A++ G + A + YG +G P I G G + A +AL+ + +
Sbjct: 257 GAAMLVVMAKEKAEELGIEPLATIVSYGTAG-----VDPKIMGYGPVPATKKALEAANMT 311
Query: 305 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHLLGA 357
+D V A+ EA A ++V A L K GAI GH +G
Sbjct: 312 IEDIDLVEAN----------EAFAAQSV----AVIRDLNIDMNKVNVNGGAIAIGHPIGC 357
Query: 358 AGA 360
+GA
Sbjct: 358 SGA 360
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 9e-05
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C +G S+ AA+ I G++DV++AGGTE+
Sbjct: 91 CGSGLKSVQLAAQSITSGENDVVIAGGTEN 120
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 1e-04
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 26/123 (21%)
Query: 245 GSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQ 304
G+ +L+L + A + G + A+++ Y +G +P + G G I A +ALK++GL
Sbjct: 256 GAAMLILMSQQKADELGIRPLAKIKSYASAG-----VEPEVMGTGPIPATRKALKKAGLS 310
Query: 305 SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHLLGA 357
+ +D + A+ EA A + + A L S+K GAI GH +GA
Sbjct: 311 INDIDLIEAN----------EAFAAQAL----AVKNELQIDSSKLNVNGGAIALGHPIGA 356
Query: 358 AGA 360
+GA
Sbjct: 357 SGA 359
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 1e-04
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 26/126 (20%)
Query: 242 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQS 301
+ +G+ +L A +RG + + + G P + G G I A +AL+++
Sbjct: 249 LNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVD-----PKVMGTGPIPASRKALERA 303
Query: 302 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-----GAI--GHL 354
G + +D V A+ EA A + A + L + + GAI GH
Sbjct: 304 GWKIGDLDLVEAN----------EAFAAQAC----AVNKDLGWDPSIVNVNGGAIAIGHP 349
Query: 355 LGAAGA 360
+GA+GA
Sbjct: 350 IGASGA 355
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 4e-04
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C +G ++ + I GD+ ++VAGG ES
Sbjct: 89 CGSGLRAVALGMQQIATGDASIIVAGGMES 118
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C++G ++ A I+ G D+ +A G ES
Sbjct: 117 CSSGLQAVASIAGGIRNGSYDIGMACGVES 146
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 173 CATGAHSIGDAARMIQFGDSDVMVAGGTES 202
C++G ++ D A I+ G D+ + G ES
Sbjct: 118 CSSGLQAVADVAAAIKAGFYDIGIGAGLES 147
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 426 | |||
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.97 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.97 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.96 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.95 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.95 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.94 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.94 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.93 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.92 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.92 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.9 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.89 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.89 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.87 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.86 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.82 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.81 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.79 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.77 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.77 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.77 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.75 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.75 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.75 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.75 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.74 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.74 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.73 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.72 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.7 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.7 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.69 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.69 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.67 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.63 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.62 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.6 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.59 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.52 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.51 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.46 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.4 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.06 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 82.79 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 81.92 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 80.77 |
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-77 Score=587.45 Aligned_cols=401 Identities=45% Similarity=0.756 Sum_probs=373.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||.|.++++||++|++|+++++++++++ ...++.++++++++ ||+.+++++++.++||
T Consensus 16 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~i~~------fd~~~~~~~~~~~~~d 75 (416)
T 1e5m_A 16 AITPIGNTLQDYWQGLMEGRNGIGPITRFD--------------ASDQACRFGGEVKD------FDATQFLDRKEAKRMD 75 (416)
T ss_dssp EEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCCS------CCGGGTSCHHHHHTSC
T ss_pred EECCCCCCHHHHHHHHHcCCCeEeeCCccc--------------cccCccceeEEeCC------CCccccCCHHHHHhcC
Confidence 479999999999999999999999998755 23566788898876 9998889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++.+++ ..+++||+|++.++....++++..+...+...++|+.+++.+.+.++++|++.|
T Consensus 76 ~~~~l~l~aa~~Al~dAg~~~~~i~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 154 (416)
T 1e5m_A 76 RFCHFAVCASQQAINDAKLVINELN-ADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINL 154 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcC-ccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHh
Confidence 9999999999999999999988874 889999999999998888888887777888889999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++|+||++||+|+|.++++..+..|..++.++.+ +++|+..|+|||.+++|+
T Consensus 155 gl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G~ 233 (416)
T 1e5m_A 155 GAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHASRPFDKDRDGF 233 (416)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCGGGTCCTTBTTCCSB
T ss_pred CCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCC-CCCCccccccCccCCCCc
Confidence 9999999999999999999999999999999999999999998899988899999988754 345778999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||+++++|+++|++++++|+|++.++|+.+++.|.+.+.++.++++++|+++|++|+||||||+|+|||+.
T Consensus 234 v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~ 313 (416)
T 1e5m_A 234 VMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPA 313 (416)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred eeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcC
Confidence 99999999999999999999999999999999999999988888888889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|++|..++.++|+... .+++|++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .++++
T Consensus 314 ~D~~E~~al~~~~g~~~--~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~ 390 (416)
T 1e5m_A 314 NDVTETRAIKQALGNHA--YNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP-GQSRA 390 (416)
T ss_dssp HHHHHHHHHHHHHGGGG--GGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB-SSCEE
T ss_pred cCHHHHHHHHHHHcccC--CCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-Ccccc
Confidence 99999999999997643 4689999999999999999999999999999999999999999999999999998 67778
Q ss_pred CCCcEEEEeccccccceeeeEeeecC
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
++.|++++|||||||+|+|+||++++
T Consensus 391 ~~~~~a~~~sfGfGG~n~~~vl~~~~ 416 (416)
T 1e5m_A 391 LIVDVALSNSFGFGGHNVTLAFKKYQ 416 (416)
T ss_dssp CCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCCEEEEccccCCCeeEEEEEEeCC
Confidence 88999999999999999999999975
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-77 Score=591.13 Aligned_cols=400 Identities=46% Similarity=0.803 Sum_probs=375.5
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||+|.++++||++|++|+++|+++++++ ...++.++++++++ ||+.+|+++++.+.||
T Consensus 27 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~~~i~~~~~~~~d 86 (427)
T 3ho9_A 27 MLSPVGNTVESTWKALLAGQSGISLIDHFD--------------TSAYATKFAGLVKD------FNCEDIISRKEQRKMD 86 (427)
T ss_dssp EEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTCSCCEEECCSS------CCCTTTSCHHHHTTSC
T ss_pred EECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccceeeEcCC------CChhhcCCHHHHhhCC
Confidence 589999999999999999999999998766 33467788999987 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++|+++||+|||+++.+++ ..++||++|++.++......++..+...+...++|+.+++.+.+.++++|++.|
T Consensus 87 ~~~~l~l~aa~~AL~dAGl~~~~i~-~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (427)
T 3ho9_A 87 AFIQYGIVAGVQAMQDSGLEITEEN-ATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMY 165 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCccccc-ccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHh
Confidence 9999999999999999999988874 889999999999999999988888888888999999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++|+||++||+|+|.++++..+..|...++++.. ...|...|+||+.+++|+
T Consensus 166 gl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~G~ 244 (427)
T 3ho9_A 166 GLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGF 244 (427)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHCCTTBTTCCSB
T ss_pred CCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccC-CCCCCcccCCccCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999854 344566899999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||+++++|+++|+++|++|.|++.++|+.+.+.|.+.+.++.++++++|+++|++|+||||||+|||||+.
T Consensus 245 v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~ 324 (427)
T 3ho9_A 245 VLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPA 324 (427)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred eeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCC
Confidence 99999999999999999999999999999999999999988888888889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|..|..++.++|+... .++++++.|.++||+++|||++++++++++|+++++||++|+++|+|.+++++++ ...++
T Consensus 325 ~d~~e~~a~~~~~g~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~ 401 (427)
T 3ho9_A 325 GDKAEAQAVKTIFGEAA--SRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP-HEARQ 401 (427)
T ss_dssp HHHHHHHHHHHHHGGGG--GTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCB-SSCEE
T ss_pred cCHHHHHHHHHHhcccC--CCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccc-ccccc
Confidence 99999999999998643 4689999999999999999999999999999999999999999999999999998 66666
Q ss_pred C-CCcEEEEeccccccceeeeEeeec
Q 014349 401 M-PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 401 ~-~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+ +.+++++|||||||+|+|+||+++
T Consensus 402 ~~~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 402 VSGMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp CSSCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCEEEEeCccCCceeEEEEEEeC
Confidence 6 789999999999999999999985
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-77 Score=587.80 Aligned_cols=396 Identities=34% Similarity=0.521 Sum_probs=370.3
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||+|.++++||++|++|++++++++.+++ ...++.++++.+++ ||+.+|+++++.+.||
T Consensus 15 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~-------------~~~~~~~~~~~v~~------fd~~~~i~~~~~~~~d 75 (412)
T 4ewg_A 15 GVTALGSRWDEIEAALKAGRNAVRRMPDWDY-------------FESLHTRLAAPLPG------FAQPADWPRKKTRSMG 75 (412)
T ss_dssp EEBTTBSSHHHHHHHHHHTCCCCEECGGGGG-------------SSSCCCCEEBCCSC------CCCCTTSCHHHHTTCC
T ss_pred EECCCcCCHHHHHHHHHcCCCceeeCCcccc-------------ccCCccceeeecCC------CChhhhCCHHHHhhCC
Confidence 5899999999999999999999999998662 11466778888876 9999899999999999
Q ss_pred HHHHHHHHHHHHHHHHcCC-CCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKW-LPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl-~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
|+++|+++++++||+|||+ ++.++ +..++||++|++.+++...++++..+...+...++|+.++..+.+.++++|++.
T Consensus 76 ~~~~l~l~aa~~Al~dAGl~~~~~i-~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 154 (412)
T 4ewg_A 76 RVSMYAVRASELALADAGFAGDESI-SDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLF 154 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCGGG-GTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccc-CccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHH
Confidence 9999999999999999999 66666 488999999999999999999999998888999999999999999999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
||++||+++|+++|+|+++||..|+++|++|+||++||+|+|. +++.....|..++.++.. ..+|+..|+|||.+++|
T Consensus 155 lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~-~~~p~~~~rpfd~~~~G 232 (412)
T 4ewg_A 155 WDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTR-NDEPHLTPRPFDAKRDG 232 (412)
T ss_dssp TTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCC-TTCGGGCCCTTBTTCCC
T ss_pred hCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccC-CCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999998 888888999999998864 55677899999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+++||||+++||+++++|+++|.++|++|.|++.++|+++++.| .+.++.++++++|+++|++|+||||||+|||||+
T Consensus 233 ~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~ 310 (412)
T 4ewg_A 233 LVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIAYVNAHGTSTD 310 (412)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCH
T ss_pred CceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCc
Confidence 99999999999999999999999999999999999999998887 4678899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC-CCCCCccccC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-NDNFMPLTAS 398 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~-~~~~~~~~~~ 398 (426)
.+|++|..++.++|+.+ ++|++.|+++||+++|||++++++++++|+++++||++|+++|+|.+ ++++++ .++
T Consensus 311 ~~D~~E~~al~~~~~~~-----~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~-~~~ 384 (412)
T 4ewg_A 311 RGDVAESQATARTFGER-----MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIR-GEA 384 (412)
T ss_dssp HHHHHHHHHHHHHHCTT-----CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECC-SSC
T ss_pred cccHHHHHHHHHHcCCC-----CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccccccccc-Ccc
Confidence 99999999999999753 89999999999999999999999999999999999999999999999 899988 777
Q ss_pred CCCCCcEEEEeccccccceeeeEeeecC
Q 014349 399 KDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 399 ~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
+.++.+++++|||||||+|+|+||++++
T Consensus 385 ~~~~~~~~~~~sfgfGG~na~~vl~~~~ 412 (412)
T 4ewg_A 385 RAIDAEYVMSNNFAFGGINTSLIFRRVR 412 (412)
T ss_dssp EECCCSEEEEEEEEGGGEEEEEEEECCC
T ss_pred cCCCCCEEEEeeecCCcceEEEEEeeCC
Confidence 7888999999999999999999999985
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-76 Score=585.06 Aligned_cols=400 Identities=45% Similarity=0.780 Sum_probs=376.9
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|.|.++++||++|++|+++++++++++ ...++.++++.+++ ||+.+|+++++.+.||
T Consensus 13 ~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~~~i~~~~~~~~d 72 (413)
T 3o04_A 13 AVTPIGNDAETSWENAKKGVNGVAKMTRLN--------------PDDFPVKIAAELKD------FDVEKYLEKKEARKMD 72 (413)
T ss_dssp EEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------GGGSSCCEEECCSS------CCGGGTSCHHHHTTSC
T ss_pred EECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccccccccCC------CChhhccCHHHHhhCC
Confidence 479999999999999999999999998765 23456778888876 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++|+++||+|||+++.+++ +.+++||+|++.++....+..+..+...+...++|+.+++.+.++++++|++.|
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id-~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 151 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSN-ANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRF 151 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcC-ccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHh
Confidence 9999999999999999999998884 899999999999999999999999988899999999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++|+||++||+|+|.++++.....|...+.++. ..+|++.|+||+.+++|+
T Consensus 152 gl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~--~~~p~~~~~pfd~~~~g~ 229 (413)
T 3o04_A 152 GAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL--NPDPETACRPFDKDRDGF 229 (413)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CCCTTTSCCTTBTTCCSB
T ss_pred CCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC--CCCCCCCcCCCcCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999884 345778999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||+++++|+++|.+++++|.|++.++|+.+.+.|.+.+.++.++++++|+++|++|+||||||+|||||+.
T Consensus 230 ~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~ 309 (413)
T 3o04_A 230 IIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPY 309 (413)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred eEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc
Confidence 99999999999999999999999999999999999999988888888889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|++|..++.++|+... .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.+++++++ .+.+.
T Consensus 310 ~d~~e~~al~~~~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~ 386 (413)
T 3o04_A 310 NDEYETQAIKTVFGEHA--KKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVP-NEARE 386 (413)
T ss_dssp HHHHHHHHHHHHHGGGT--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCB-SSCEE
T ss_pred cCHHHHHHHHHHhcccC--CCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCC-CcccC
Confidence 99999999999998653 4699999999999999999999999999999999999999999999999999998 67777
Q ss_pred CCCcEEEEeccccccceeeeEeeecC
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
.+.+++++|+|||||+|+|+||++++
T Consensus 387 ~~~~~~~~~sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 387 ANVNVVISNSFGFGGHNATLVFKRIE 412 (413)
T ss_dssp CCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCCEEEEeCccCCceEEEEEEEeCC
Confidence 88999999999999999999999974
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-76 Score=586.17 Aligned_cols=407 Identities=54% Similarity=0.893 Sum_probs=378.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCC-CCCCCCCccCCCChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCG-ISSGEFNEDSWLNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fd~~~~~~~~~~~~~ 79 (426)
+|||+|.++++||++|++|+++|+++++++ ...++.+++++++.. .+...||+.+|+++++.+.|
T Consensus 19 ~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~ 84 (428)
T 3kzu_A 19 LVSPLASGVEETWKRLLAGESGARRVTEFE--------------VDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKV 84 (428)
T ss_dssp EECSSCBSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTS
T ss_pred EECCCcCCHHHHHHHHHcCCCeeeeCCccc--------------cccCcCceeeEecccccccccCChhhcCCHHHHHhC
Confidence 589999999999999999999999999776 334667788888721 11345999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCC-CCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSD-QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~-~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
||+++|+++|+++||+|||+++.+ + +..++||++|++.+++....++...+...+...++|+.+++.+.+..+++|++
T Consensus 85 d~~~~l~l~aa~~AL~dAGl~~~~~i-d~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 163 (428)
T 3kzu_A 85 DPFIVYAVGAADQALDDAGWHPENDE-DQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI 163 (428)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCCCSHH-HHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCChhhhc-cccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHH
Confidence 999999999999999999999876 5 36789999999999999999998888888889999999999999999999999
Q ss_pred HcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 159 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 159 ~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
.||++||+++|+++|+|++.||..|+++|++|+||++||+|+|.++++..+..|...+.++......|...|+||+.+++
T Consensus 164 ~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 243 (428)
T 3kzu_A 164 KHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRD 243 (428)
T ss_dssp HHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCC
T ss_pred HcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999987666677789999999999
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
|+++||||+++||+++++|+++|.+++++|.|++.++|+.+.+.|.+.+.++.++++++|+++|++|+||||||+|||||
T Consensus 244 G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT 323 (428)
T 3kzu_A 244 GFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST 323 (428)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS
T ss_pred ceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc
Confidence 99999999999999999999999999999999999999999988988888889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccC
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 398 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 398 (426)
.+|..|..++.+.|+... .++++++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ ..+
T Consensus 324 -~~d~~e~~al~~~~g~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~ 399 (428)
T 3kzu_A 324 -MADTIELGAVERVVGEAA--AKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVP-HKP 399 (428)
T ss_dssp -TTHHHHHHHHHHHHGGGG--GGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCB-SSC
T ss_pred -hhhHHHHHHHHHHhccCC--CceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCC-CCC
Confidence 999999999999998653 4689999999999999999999999999999999999999999999999999998 777
Q ss_pred CCCCCcEEEEeccccccceeeeEeeecC
Q 014349 399 KDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 399 ~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
+.++.+++++|+|||||+|+|+||++|+
T Consensus 400 ~~~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 400 RERKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp EECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred cCCCCCEEEEeCcccChhhEEEEEeecC
Confidence 7788999999999999999999999974
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-77 Score=592.25 Aligned_cols=420 Identities=77% Similarity=1.213 Sum_probs=380.4
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|+|.++++||++|++|+++++++++++|....|+++........++.++++++++..+.+.||+++|++++ +||
T Consensus 10 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~~~~---~~d 86 (431)
T 2ix4_A 10 MVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWLNSK---AVA 86 (431)
T ss_dssp EEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHSCST---TCC
T ss_pred EECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcCChh---hCC
Confidence 57999999999999999999999999987655556665543332345778899999842234569988888776 899
Q ss_pred HHHHHHHHHHHHHHHHcCC-CCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKW-LPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl-~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
|+++|+++++++||+|||+ ++.+++ ..+++|++|++.+++....+++..+...+...++|+.+++.+.+.++++|++.
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 165 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEE-KERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMK 165 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHH-HHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccC-CCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHH
Confidence 9999999999999999999 876663 67899999999999888888888777777788999999999999999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
||++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..|..++.++.+++.+|+..|+||+.+++|
T Consensus 166 lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~g 245 (431)
T 2ix4_A 166 YGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDG 245 (431)
T ss_dssp HTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTCCS
T ss_pred HCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999988899999999877777788899999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+++||||+++||++++.|+++|.+++++|+|++.++|+.+++.|.+.+.++.++++++|+++|++|+||||||+|||||+
T Consensus 246 ~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~ 325 (431)
T 2ix4_A 246 FVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTP 325 (431)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred ceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCc
Confidence 99999999999999999999999999999999999999998888878888899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASK 399 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~ 399 (426)
.+|.+|.+++.++|+....+.++++++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+.+
T Consensus 326 ~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~ 404 (431)
T 2ix4_A 326 IGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMP-LTTS 404 (431)
T ss_dssp HHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCC-CSSC
T ss_pred ccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCC-cccc
Confidence 999999999999998643335689999999999999999999999999999999999999999999999999998 6666
Q ss_pred CC-CCcEEEEeccccccceeeeEeeec
Q 014349 400 DM-PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 400 ~~-~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++ +.|++++|||||||+|+|+||+++
T Consensus 405 ~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 405 KKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp EECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred ccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 66 789999999999999999999985
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-76 Score=584.36 Aligned_cols=400 Identities=45% Similarity=0.762 Sum_probs=372.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|.|.++++||++|++|+++++++++++ ...++.++++++++ ||+.+++++++.++||
T Consensus 37 ~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~i~~------fd~~~~~~~~~~~~~d 96 (437)
T 2gqd_A 37 ALSPIGNDVKTTWENALKGVNGIDKITRID--------------TEPYSVHLAGELKN------FNIEDHIDKKEARRMD 96 (437)
T ss_dssp EEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCSS------CCGGGTSCSTTTTTSC
T ss_pred EECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccceeEEeCC------CChhcCCCHHHHHhcC
Confidence 479999999999999999999999998755 23466788888876 9988889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++++++ +.+++||+|++.+++......+..+...+...++|+.+++.+.+.++++|++.|
T Consensus 97 ~~~~l~l~aa~~AL~dAGl~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (437)
T 2gqd_A 97 RFTQYAIVAAREAVKDAQLDINENT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDL 175 (437)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccccC-CcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHh
Confidence 9999999999999999999988874 889999999999998888888887878888889999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|+++||..|+++|++|+||++||+|+|.++++..+..|..++.++. +++|+..|+|||.+++|+
T Consensus 176 gl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~--~~~p~~~~~pfd~~~~G~ 253 (437)
T 2gqd_A 176 GAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIETACRPFQEGRDGF 253 (437)
T ss_dssp TCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CCCTTTSSCTTCTTCCSB
T ss_pred CCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC--CCCCccccCCCCCCCCCc
Confidence 999999999999999999999999999999999999999999899999999999998875 345778999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||+++++|+++|++++++|+|++.++|+.+++.|.+.+.++.++++++|+++|++|+||||||+|+|||+.
T Consensus 254 v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~ 333 (437)
T 2gqd_A 254 VMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPV 333 (437)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred eeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcC
Confidence 99999999999999999999999999999999999999988888888889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|++|.+++.++|+... .+++|++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+.+.
T Consensus 334 ~D~~E~~al~~~fg~~~--~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~ 410 (437)
T 2gqd_A 334 GDLNEVKAIKNTFGEAA--KHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP-NEAQD 410 (437)
T ss_dssp HHHHHHHHHHHHHGGGG--TSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCB-SSCEE
T ss_pred cCHHHHHHHHHHHhccC--CCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC-Ccccc
Confidence 99999999999998643 4689999999999999999999999999999999999999999999999999998 67777
Q ss_pred CCCcEEEEeccccccceeeeEeeecC
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
++.+++++|||||||+|+|+||++++
T Consensus 411 ~~~~~a~~~sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 411 LDITYAMSNSLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp CCCSEEEEEEECGGGEEEEEEEECCC
T ss_pred CCCCEEEEccCcCCCeeEEEEEEecc
Confidence 88999999999999999999999874
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-76 Score=586.99 Aligned_cols=405 Identities=51% Similarity=0.830 Sum_probs=372.3
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|.|.++++||++|++|+++|+++++++ ...++.++++++++..+.+.||+.+|+++++.++||
T Consensus 30 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d 95 (438)
T 2iwz_A 30 LVTPLGVGTHLVWDRLIGGESGIVSLVGEE--------------YKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMS 95 (438)
T ss_dssp EEETTEESHHHHHHHHHTTCCCEEECCSGG--------------GTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSC
T ss_pred EECCCCCCHHHHHHHHHcCCCccccCCchh--------------cccCccceeeeeccccccccCChhhcCCHHHHHhcC
Confidence 479999999999999999999999999765 234677889998752234569999889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCC-CCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLP-SDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~-~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
|+++|+++++++||+|||+++ .++ +..++||++|++.++.....+++..+...+...++|+.+++.+.+.++++|++.
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 174 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEA-DQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIR 174 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHH-HHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccc-cCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHH
Confidence 999999999999999999987 655 367899999999999888888888887788888999999999999999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
||++||+++|+++|+|++.||..|+++|++|+||++||+|+|.+++|..+..|..++.++.. ..|+..|+|||.+++|
T Consensus 175 lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~--~~p~~~~~pfd~~~~G 252 (438)
T 2iwz_A 175 YKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN--SDPKLACRPFHPKRDG 252 (438)
T ss_dssp HTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC--SCTTTSCCTTCTTCCS
T ss_pred hCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC--CCCCcccccCCCCCCC
Confidence 99999999999999999999999999999999999999999998899988899999988752 3467899999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+++||||+++||+++++|+++|.++|++|+|++.++|+.+++.|.+.+.++.++++++|+++|++|+||||||+|+|||+
T Consensus 253 ~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~ 332 (438)
T 2iwz_A 253 FVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTP 332 (438)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred EEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCc
Confidence 99999999999999999999999999999999999999998888888888999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASK 399 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~ 399 (426)
.+|++|..++.++|+... .+++|++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+.+
T Consensus 333 ~gD~~E~~al~~~fg~~~--~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~ 409 (438)
T 2iwz_A 333 LGDAAENKAIKHLFKDHA--YALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVP-LKAQ 409 (438)
T ss_dssp HHHHHHHHHHHHHHGGGG--GTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCB-SSCE
T ss_pred ccCHHHHHHHHHHHhccC--CCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC-CCcc
Confidence 999999999999997643 4689999999999999999999999999999999999999999999999999998 6666
Q ss_pred CCC---CcEEEEeccccccceeeeEeeec
Q 014349 400 DMP---ISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 400 ~~~---~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+++ .|++++|||||||+|+|+||+++
T Consensus 410 ~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 410 EWKTEKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp ECCCSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred cCCCCCccEEEEecCcCCCeeEEEEEeeC
Confidence 666 89999999999999999999985
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-76 Score=578.37 Aligned_cols=398 Identities=52% Similarity=0.855 Sum_probs=370.8
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
++||+|.++++||++|++|+++++++++++ ...++.++++++ + ||+++|+++++.++||
T Consensus 11 ~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~--------------~~~~~~~~~~~~-~------fd~~~~~~~~~~~~~d 69 (408)
T 1j3n_A 11 ALTPIGVGQEAFHKAQLAGKSGVRPITRFD--------------ASALPVRIAAEV-D------VDPGAYLDRKELRRLD 69 (408)
T ss_dssp EEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECC-C------CCGGGTSCHHHHTTSC
T ss_pred EECCCCCCHHHHHHHHHcCCCeeeeccccC--------------cccCccceEEEE-c------cChhhcCCHHHHHhcC
Confidence 579999999999999999999999998755 234667888888 5 9998889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++.+++ ..++||++|++.+++.....++..+...+...++|+.+++.+.+.++++|++.|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 148 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLD-PERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRY 148 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSC-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccccC-CCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHh
Confidence 9999999999999999999988874 889999999999999888888888888888899999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++|++|++||+|+|.++++..+..|...+.++.+ +..|+..|+|||.+++|+
T Consensus 149 gl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~-~~~p~~~~~pfd~~~dg~ 227 (408)
T 1j3n_A 149 GFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASRPFTLSRDGF 227 (408)
T ss_dssp TCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHCCTTBTTCCCB
T ss_pred CCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCC-CCCCCcCcccCcCCCCce
Confidence 9999999999999999999999999999999999999999998999999999999998853 455667899999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||+++++|+++|++++++|.|++.++|+.+.+.|.+.+.++.++++++|+++|++|+||||||+|+|||+.
T Consensus 228 v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 307 (408)
T 1j3n_A 228 VMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPV 307 (408)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred EEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcc
Confidence 99999999999999999999999999999999999999988888888889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|++|..++.++|+... .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.+++++++ ++++
T Consensus 308 gD~~E~~al~~~~g~~~--~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~--~~~~ 383 (408)
T 1j3n_A 308 GDRAEVLAIKRVFGDHA--KRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPRE 383 (408)
T ss_dssp HHHHHHHHHHHHHHHHH--TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS--SCEE
T ss_pred cCHHHHHHHHHHhcCcC--CCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC--CCcC
Confidence 99999999999998643 3689999999999999999999999999999999999999999999999999887 5667
Q ss_pred CCCcEEEEeccccccceeeeEeeec
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++.|++++|||||||+|+|+||+++
T Consensus 384 ~~~~~a~~~sfGfGG~na~~vl~~~ 408 (408)
T 1j3n_A 384 AKVDYALSNSFAFGGHNAVLAFKRV 408 (408)
T ss_dssp CCCSEEEEEEECTTSEEEEEEEECC
T ss_pred CCCCEEEEecccCCcceEEEEEecC
Confidence 7899999999999999999999985
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-75 Score=574.73 Aligned_cols=397 Identities=43% Similarity=0.664 Sum_probs=369.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|.|.++++||++|++|+++++++++++ ...++.++++++++ ||+.+|+++++.++||
T Consensus 32 ~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~~~~~~~~~~~~d 91 (430)
T 1ox0_A 32 VTSPIGNTPEEFWNSLATGKIGIGGITKFD--------------HSDFDVHNAAEIQD------FPFDKYFVKKDTNRFD 91 (430)
T ss_dssp EEBTTBSSHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECCSS------CCHHHHCCGGGGGTCC
T ss_pred EECCCcCCHHHHHHHHHcCCCeeeeCCccc--------------ccCCccceeeeccC------CChhhcCCHHHHHhcC
Confidence 479999999999999999999999998755 23466788888876 9988889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++.+++ ..++||++|++.+++....+++..+...+...++|+.+++.+.+.++++|++.|
T Consensus 92 ~~~~l~l~aa~~AL~dAG~~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 170 (430)
T 1ox0_A 92 NYSLYALYAAQEAVNHANLDVEALN-RDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRF 170 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTSC-GGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcC-ccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHh
Confidence 9999999999999999999988874 889999999999998888888887778888899999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++|+||++||+|+|.+++|..+..|..++.++. .+.|+..|+|||.+++|+
T Consensus 171 gl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~--~~~p~~~~~pFd~~~~g~ 248 (430)
T 1ox0_A 171 GANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGF 248 (430)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CSSTTSSSCTTBTTCCSB
T ss_pred cCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC--CCCCCCCCCCCCCCCCCc
Confidence 999999999999999999999999999999999999999999899988888988888874 345778999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||+++++|+++|.+++++|.|++.++|+.+.+.|.+.+.++.++++++|+++|++|+||||||+|+|||+.
T Consensus 249 ~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 328 (430)
T 1ox0_A 249 VMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPA 328 (430)
T ss_dssp CBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHH
T ss_pred cccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcc
Confidence 99999999999999999999999999999999999999988888888888999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|+.|..++.++|+. +++|+++|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+.++
T Consensus 329 ~D~~E~~al~~~~g~-----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~ 402 (430)
T 1ox0_A 329 NEKGESGAIVAVLGK-----EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY-GQGLE 402 (430)
T ss_dssp HHHHHHHHHHHHHCS-----SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB-SSCEE
T ss_pred cCHHHHHHHHHHhCC-----CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC-CCCcC
Confidence 999999999999964 489999999999999999999999999999999999999999999999999888 66667
Q ss_pred CCCcEEEEeccccccceeeeEeeecC
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
++.+++++|||||||+|+|+||++++
T Consensus 403 ~~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 403 KEIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp CCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCCEEEEeCccCCCceEEEEEeecC
Confidence 78999999999999999999999874
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-75 Score=575.57 Aligned_cols=393 Identities=25% Similarity=0.363 Sum_probs=366.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|.|.++++||++|++|+++++++++++ ...++.++++++++ ||+.+|+++++.++||
T Consensus 18 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~~~~~~~~~~~~d 77 (415)
T 1tqy_B 18 VVAPNGLGLAPYWSAVLDGRHGLGPVTRFD--------------VSRYPATLAGQIDD------FHAPDHIPGRLLPQTD 77 (415)
T ss_dssp EEETTEESHHHHHHHHHTTCCCEEECTTTT--------------GGGSSCCEEECCCS------CCHHHHSCTTTGGGCC
T ss_pred EECCCCCCHHHHHHHHHcCCCcEEECCccc--------------ccCCCcceEEEeCC------CCchhcCCHHHHHhcC
Confidence 479999999999999999999999998654 22356788999976 9998889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++.+++ ..++||++|++.+++...++++..+...+...++|+.+++.+.+.++++|++.|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 156 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLT-DYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRH 156 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSC-GGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccccC-CCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHh
Confidence 9999999999999999999988874 889999999999999999888888888888899999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++| ||++||+|+|.++++..+..|..++.++. +.+|++.|+||+.+++|+
T Consensus 157 gl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~--~~~~~~~~~pfd~~~~G~ 233 (415)
T 1tqy_B 157 GMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST--ATDPDRAYLPFDERAAGY 233 (415)
T ss_dssp TCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC--CSCGGGSCCTTSTTCCCB
T ss_pred CCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC--CCCCCCCcCCCCCCCCCc
Confidence 999999999999999999999999999999 99999999999999999999999998884 333567999999999999
Q ss_pred eeccceEEEEecchHHHHhcCC-eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~-~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
++||||+++||+++++|+++|. ++|++|.|++.++|+.+++.|++ ++.++++++|+++|++|+||||||+|||||+
T Consensus 234 ~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~ 310 (415)
T 1tqy_B 234 VPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVDVVFADGAGVP 310 (415)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCCEEECCCCCSH
T ss_pred ceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCc
Confidence 9999999999999999999999 99999999999999999888876 5689999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASK 399 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~ 399 (426)
.+|.+|..++.++|+.. .++|++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+++
T Consensus 311 ~~D~~E~~al~~~~g~~----~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~ 385 (415)
T 1tqy_B 311 ELDAAEARAIGRVFGRE----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVL-GEPR 385 (415)
T ss_dssp HHHHHHHHHHHHHHCTT----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECB-SSCB
T ss_pred CcCHHHHHHHHHHhCCC----CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CCCc
Confidence 99999999999999754 389999999999999999999999999999999999999999999999999888 7778
Q ss_pred CCCCcEEEEeccccccceeeeEeeec
Q 014349 400 DMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 400 ~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++..|++++|+|||||+|+|+||+++
T Consensus 386 ~~~~~~a~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 386 STAPRTALVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp CCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCCCEEEEecCcCCCeEEEEEEecC
Confidence 88999999999999999999999986
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-75 Score=580.61 Aligned_cols=407 Identities=48% Similarity=0.786 Sum_probs=377.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCC--CCCCCCCccCCCChhhhhc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCG--ISSGEFNEDSWLNSKDHRS 78 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~fd~~~~~~~~~~~~ 78 (426)
+++|+|.++++||++|++|+++++++++++ ...++.++++++++. .+...||+.+|+++++.+.
T Consensus 33 ~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~--------------~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~ 98 (451)
T 4ddo_A 33 IVSPLGCGKELVWQRLIGGGSGLRRLGDDI--------------AGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRK 98 (451)
T ss_dssp EEETTEESHHHHHHHHHTTCCCEEECCHHH--------------HTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTT
T ss_pred EECCCCCCHHHHHHHHHcCCCeeeeCCccc--------------cccccCccceEccccccccccccchhhhCCHHHHhh
Confidence 589999999999999999999999998765 345677889998731 1123599999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
|||+++|+++|+++||+|||+++.++.+..++||++|++.++....+.++..+...+...++|+.+++.+.+.++++|++
T Consensus 99 ~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 178 (451)
T 4ddo_A 99 MDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISI 178 (451)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHH
Confidence 99999999999999999999998876227899999999999999999998888888888999999999999999999999
Q ss_pred HcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 159 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 159 ~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
.||++||+++|+++|+|++.||..|+++|++|+||++||+|+|.++++..+..|...++++..+..+|...|+||+.+++
T Consensus 179 ~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 258 (451)
T 4ddo_A 179 KHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRD 258 (451)
T ss_dssp HHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCC
T ss_pred HhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999987666677789999999999
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
|+++||||+++||+++++|+++|.+++++|.|++.++|+.+.+.|.+.+.++.++++++|+++|++|+||||||+|+|||
T Consensus 259 g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt 338 (451)
T 4ddo_A 259 GFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATST 338 (451)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSC
T ss_pred CcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcC
Confidence 99999999999999999999999999999999999999998888888888889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCC-CCCCCcccc
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIF-NDNFMPLTA 397 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~-~~~~~~~~~ 397 (426)
+.+|.+|..++.++|+.. .+++|+++|+++||+++|||++++++++++|+++++||++|+++|+|.+ ++++++ ..
T Consensus 339 ~~~d~~E~~al~~~~~~~---~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~ 414 (451)
T 4ddo_A 339 PVGDAGEIEALKTVFGVG---AGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIG-PA 414 (451)
T ss_dssp HHHHHHHHHHHHHHHCSS---SSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECC-SS
T ss_pred cccCHHHHHHHHHHhCCC---CCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccccC-CC
Confidence 999999999999999862 4789999999999999999999999999999999999999999999999 888888 67
Q ss_pred CCCCCCcEEEEeccccccceeeeEeeec
Q 014349 398 SKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 398 ~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+.++.+++++|+|||||+|+|+||+++
T Consensus 415 ~~~~~~~~a~~~sfgfgG~na~~vl~~~ 442 (451)
T 4ddo_A 415 ARHVPVEIALSNGFGFGGVNASVLFRRY 442 (451)
T ss_dssp CEECCCSEEEEEEEETTTEEEEEEEEES
T ss_pred CCCCCcCEEEEeeEcCCCceEEEEEeeC
Confidence 7778899999999999999999999986
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-75 Score=576.52 Aligned_cols=395 Identities=37% Similarity=0.571 Sum_probs=360.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|+|.++++||++|++|++++++++.++ ...++.++++++ + ||+.+|+++++.+.||
T Consensus 32 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~g~~-~------fd~~~~i~~~~~~~~d 90 (428)
T 3mqd_A 32 IVSSIGSNTEEVTASLREAKSGISRAEEYA--------------ELGFRCQVHGAP-D------IDIESLVDRRAMRFHG 90 (428)
T ss_dssp EEBTTBSSHHHHHHHHHHTCCCEEECHHHH--------------HTTCSCCEEECC-C------CCHHHHSCTGGGTTCC
T ss_pred EECCCcCCHHHHHHHHHcCCCcceeCCccc--------------ccCCCccccccc-C------CChhhcCCHHHHhhCC
Confidence 589999999999999999999999998755 234666777773 3 9998889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+++.+++ ..++||++|++.+......++...+...+...++|+.+++.+.+.++++|+..|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~-~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 169 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVS-NERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFF 169 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHS-STTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcc-ccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHc
Confidence 9999999999999999999887774 889999999999888888888888888888899999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|+++||..|+++|++|+||++||+|+|.+ ++.....|..++.++......|++.|+|||.+++|+
T Consensus 170 gl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~-s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~ 248 (428)
T 3mqd_A 170 KIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDL-DWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGF 248 (428)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC-CHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSB
T ss_pred CCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeeccc-chHHHHHHHHhhhhcccccCCcccccCcccCCCCCc
Confidence 9999999999999999999999999999999999999999984 555566688999998766667888999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++||||+++||+++++|+++|++||++|.|++.++|+.+++.| .+.++.++++++|+ |++ +||||||+|||||+.
T Consensus 249 v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~ 323 (428)
T 3mqd_A 249 VIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SKIDYINPHATSTPA 323 (428)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHH
T ss_pred ccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCC
Confidence 9999999999999999999999999999999999999988877 56778999999999 999 999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC-CCCCccccCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN-DNFMPLTASK 399 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~-~~~~~~~~~~ 399 (426)
+|++|..++.++|+... ..++|++.|+++||+++|||++++++++++|+++++||++|+++|+|.++ +++++ ...+
T Consensus 324 ~D~~E~~al~~~~~~~~--~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~-~~~~ 400 (428)
T 3mqd_A 324 GDAPEIEAIRQIFGAGD--VCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVR-KRID 400 (428)
T ss_dssp HHHHHHHHHHHHHCSGG--GSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCS-SCEE
T ss_pred cCHHHHHHHHHHhcccC--CCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccC-Cccc
Confidence 99999999999998432 24799999999999999999999999999999999999999999999986 78776 4444
Q ss_pred CCCCcEEEEeccccccceeeeEeeecC
Q 014349 400 DMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 400 ~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
..+++++++|||||||+|+|+||++|+
T Consensus 401 ~~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 401 NVQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp SCCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred cCCCCEEEEecCcCCcceEEEEEeecC
Confidence 467899999999999999999999985
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-75 Score=576.45 Aligned_cols=399 Identities=31% Similarity=0.511 Sum_probs=363.9
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~ 79 (426)
+++|.|.++++||++|++|+++++++++++ ...++.++++++ + ||+.+| +++++.++|
T Consensus 12 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~~-~------fd~~~~~i~~~~~~~~ 70 (424)
T 1tqy_A 12 VRAPGGNGTRQFWELLTSGRTATRRISFFD--------------PSPYRSQVAAEA-D------FDPVAEGFGPRELDRM 70 (424)
T ss_dssp EEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECC-C------CCHHHHTCCHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHcCCCceeeCCCcc--------------cccCCcceeEEe-c------cCHhhcCCCHHHHHhc
Confidence 479999999999999999999999998755 234566778877 4 999999 999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHH--HhhccCCCCcchhhhhhhHHHH---
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMIC--EKRLRRLSPFFIPRILINMASG--- 154 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~--- 154 (426)
||+++|+++++++||+|||+++.+++ ..|+||++|++.+++...++++..+. ..+...++|+.++..+++..++
T Consensus 71 d~~~~l~l~aa~~AL~dAG~~~~~i~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 149 (424)
T 1tqy_A 71 DRASQFAVACAREAFAASGLDPDTLD-PARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMP 149 (424)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCTTTCC-GGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCchhcC-CCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhH
Confidence 99999999999999999999988874 88999999999998888877777666 4555667777766666665555
Q ss_pred -HHHHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCccc
Q 014349 155 -HVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPF 233 (426)
Q Consensus 155 -~i~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf 233 (426)
+|++.||++||+++|+++|+|+++||..|+++|++|+||++||+|+|.++++..+..|..++.++.+ +.+|+..|+||
T Consensus 150 ~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~-~~~p~~~~rpf 228 (424)
T 1tqy_A 150 AEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR-NDDPEHASRPF 228 (424)
T ss_dssp HHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-CSCGGGCCCTT
T ss_pred hHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCC-CCCCCCCccCC
Confidence 9999999999999999999999999999999999999999999999998899988899999988754 44567899999
Q ss_pred ccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 014349 234 DCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNA 313 (426)
Q Consensus 234 ~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~ 313 (426)
|.+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+.+.|.+++.++.++++++|+++|++|+||||||+
T Consensus 229 d~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~ 308 (424)
T 1tqy_A 229 DGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINA 308 (424)
T ss_dssp BTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred CCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 99999999999999999999999999999999999999999999998888888888999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCC
Q 014349 314 HATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFM 393 (426)
Q Consensus 314 hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~ 393 (426)
|+|||+.+|++|..++.++|+... .+++|++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++
T Consensus 309 Hgtgt~~gD~~E~~al~~~f~~~~--~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v 386 (424)
T 1tqy_A 309 HGSGTRQNDRHETAAYKRALGEHA--RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYV 386 (424)
T ss_dssp CCCCCHHHHHHHHHHHHHHTGGGG--GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCC
T ss_pred cCccCcCcCHHHHHHHHHHhcccC--CCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccC
Confidence 999999999999999999998643 468999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 394 PLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 394 ~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+ .+.++++.+++++|+|||||+|+|+||+++
T Consensus 387 ~-~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 387 P-LEARERKLRSVLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp B-SSCEECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred C-CcccCCCCCEEEEccccCCceEEEEEEccC
Confidence 8 677788899999999999999999999975
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-75 Score=572.64 Aligned_cols=392 Identities=36% Similarity=0.578 Sum_probs=355.5
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|.|.++++||++|++|+++++++++++ ...++.+++++++ ||+.+|+++++.++||
T Consensus 11 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~-------fd~~~~~~~~~~~~~d 69 (406)
T 2vba_A 11 IVSSIGNNQQEVLASLREGRSGITFSQELK--------------DSGMRSHVWGNVK-------LDTTGLIDRKVVRFMS 69 (406)
T ss_dssp EEBTTBSSHHHHHHHHHHTCCCEEECHHHH--------------HTTCSCCEEECCC-------CCCTTSSCHHHHTTCC
T ss_pred EECCCCCCHHHHHHHHHcCCCeEEeCCccc--------------ccCCccceEEEec-------CChhhcCCHHHHHhcC
Confidence 589999999999999999999999998654 2345667787773 8888889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCC-CcEEEEEcCCCCChhHHHHHHHHHH-HhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQK-ERTGVSIGGGIGSISDTVDAAQMIC-EKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~-~~~gv~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
|+++|+++++++||+|||+++.+++ . +|+|||+|++.++.....+++..+. ..+...++|+.+++.+.+.++++|++
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 148 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQ-NNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLAT 148 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHT-TCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcC-CCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHH
Confidence 9999999999999999999876664 5 8999999999999888877777665 45556688999999999999999999
Q ss_pred HcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 159 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 159 ~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
.||++||+++|+++|+|+++||..|+++|++|+||++||+|+|.++++..+. |..++.++..++++|+..|+|||.+++
T Consensus 149 ~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pfd~~~~ 227 (406)
T 2vba_A 149 PFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRD 227 (406)
T ss_dssp TTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTTBTTCC
T ss_pred hccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcCcCCCC
Confidence 9999999999999999999999999999999999999999999988887777 899998885334457789999999999
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
|+++||||+++||+++++|+++|+++|++|+|++.++|+.+++.|+ +.++.++|+++|+++| +||||||+|||||
T Consensus 228 G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dId~ve~HgtgT 302 (406)
T 2vba_A 228 GFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPIDYLNSHGTST 302 (406)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCCCEEECCCCSC
T ss_pred ceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCccEEEeeCccC
Confidence 9999999999999999999999999999999999999999888776 6778999999999999 8999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC-CCCCcccc
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN-DNFMPLTA 397 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~-~~~~~~~~ 397 (426)
+.+|++|..++.++|+.. .++|++.|+++||+++|+|++++++++++|+++++||++|+++|+|.++ +++++ ..
T Consensus 303 ~~gD~~E~~al~~~fg~~----~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~-~~ 377 (406)
T 2vba_A 303 PVGDVKELAAIREVFGDK----SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVT-ET 377 (406)
T ss_dssp HHHHHHHHHHHHHHHTTC----CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECC-SC
T ss_pred cccCHHHHHHHHHHhCcC----CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCC-cc
Confidence 999999999999999764 3789999999999999999999999999999999999999999999998 88887 54
Q ss_pred CCCCCCcEEEEeccccccceeeeEeeecC
Q 014349 398 SKDMPISAALSNSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 398 ~~~~~~~~~l~~~~g~gG~~~~~vl~~~~ 426 (426)
++. +.|++++|||||||+|+|+||++++
T Consensus 378 ~~~-~~~~a~~~sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 378 TDR-ELTTVMSNSFGFGGTNATLVMRKLK 405 (406)
T ss_dssp EEC-CCCEEEEEEEETTTEEEEEEEECC-
T ss_pred cCC-CCCEEEEcCCCCCCeEEEEEEEeCC
Confidence 444 7899999999999999999999874
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-74 Score=565.98 Aligned_cols=396 Identities=36% Similarity=0.574 Sum_probs=362.8
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|+|.++++||++|++|+++|++++++++. ...++.++++++++ |+.+|+++++.++||
T Consensus 21 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~------------~~~~~~~~~~~~~~-------d~~~~~~~~~~~~~d 81 (416)
T 2wge_A 21 ATTSISPDIESTWKGLLAGESGIHALEDEFVT------------KWDLAVKIGGHLKD-------PVDSHMGRLDMRRMS 81 (416)
T ss_dssp EEESSCSSHHHHHHHHHTTCCCCEECCCHHHH------------HHTCSCCEEBCCSS-------CGGGGCCHHHHHHSC
T ss_pred EECCCCCCHHHHHHHHHcCCCEEEeCCccccc------------cccCCccEEEEeCC-------chhhhCCHHHHHhcC
Confidence 58999999999999999999999999865411 11356778888863 556679999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+ +++ +.+++|||+|++.+++...++++..+...+...++|+.+++.+.+..+++|++.|
T Consensus 82 ~~~~l~l~aa~~AL~dAG~--~~~-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 158 (416)
T 2wge_A 82 YVQRMGKLLGGQLWESAGS--PEV-DPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQL 158 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCC-CGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--Ccc-CCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHh
Confidence 9999999999999999999 444 4789999999999999888888888888888889999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++++++|+|++.||..|+++|++|++|++||+|+|.++.+.....|...+.++.+ +.+|+..|+|||.+++|+
T Consensus 159 gl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~pfd~~~dg~ 237 (416)
T 2wge_A 159 GARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPERASRPFDKDRDGF 237 (416)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCC-TTSGGGSCCTTBTTCCCB
T ss_pred ccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhcc-ccCCcccccccccCCCCc
Confidence 9999999999999999999999999999999999999999999999888889988888753 445678999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 320 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~ 320 (426)
++|||++++||++++.|+++|.+++++|.|++.++|+.+.+.|.+.+.++.++++++|+++|++|+||||||+|||||+.
T Consensus 238 v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~ 317 (416)
T 2wge_A 238 VFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPI 317 (416)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred cccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcC
Confidence 99999999999999999999999999999999999999988888788888999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCC
Q 014349 321 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 400 (426)
Q Consensus 321 ~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~ 400 (426)
+|++|.+++..+ +.. ++++++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+.++
T Consensus 318 gD~~E~~al~~~-~~~----~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~ 391 (416)
T 2wge_A 318 GDAAEANAIRVA-GCD----QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVA-GEPRY 391 (416)
T ss_dssp HHHHHHHHHHHT-TCT----TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECC-SSCEE
T ss_pred CCHHHHHHHHHh-ccC----CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCC-CCCcc
Confidence 999999999998 432 589999999999999999999999999999999999999999999999999988 66666
Q ss_pred CCCcEEEEeccccccceeeeEeeec
Q 014349 401 MPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 401 ~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+.|++++|||||||+|+|+||++|
T Consensus 392 ~~~~~a~~~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 392 GDYRYAVNNSFGFGGHNVALAFGRY 416 (416)
T ss_dssp CCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCEEEEeCcccCceeEEEEEEeC
Confidence 7889999999999999999999985
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-73 Score=564.33 Aligned_cols=397 Identities=34% Similarity=0.537 Sum_probs=363.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+++|+|.++++||++|++|+++|++++++++. ...++.++++++++ |+.+|+++++.++||
T Consensus 37 ~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~------------~~~~~~~~~~~v~~-------d~~~~~~~~~~~~~d 97 (434)
T 2gp6_A 37 MTTALATDAETTWKLLLDRQSGIRTLDDPFVE------------EFDLPVRIGGHLLE-------EFDHQLTRIELRRMG 97 (434)
T ss_dssp EECSSCSSHHHHHHHHHTTCCCEEECCCHHHH------------HHCCSCCEEECCSC-------CSTTSSCHHHHHTCC
T ss_pred EeCCCCCCHHHHHHHHHcCCCeeeeCCccccc------------cccCccceeEEcCC-------chhhhCCHHHHHhCC
Confidence 58999999999999999999999999865421 12356788888863 445568999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|+++++++||+|||+ .++ ++.+++||+|++.+++.....++..+...+...++|+.+++.+.+.++++|++.|
T Consensus 98 ~~~~l~l~aa~~ALedAG~--~~~-~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~l 174 (434)
T 2gp6_A 98 YLQRMSTVLSRRLWENAGS--PEV-DTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLER 174 (434)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCC-CTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcCC--Ccc-CCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhh
Confidence 9999999999999999999 344 4889999999999999888888888777788889999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhh-hcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSR-ALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++||+++|+++|+|++.||..|+++|++|+||++||+|+|.++.+..+..|..++ .++.+ +..|+..|+|||.+++|
T Consensus 175 gl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~-~~~p~~~~~pfd~~~~g 253 (434)
T 2gp6_A 175 HAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTN-NDDPAGACRPFDRDRDG 253 (434)
T ss_dssp CCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCC-TTCTTTSCCSSBTTCCC
T ss_pred cCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCC-CCCCCCceecccccCCC
Confidence 99999999999999999999999999999999999999999999998888899888 66543 44577899999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 319 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~ 319 (426)
+++||||+++||++++.|+++|++++++|.|++.++|+.+++.|.+.+.++.++++++|+++|++|+||||||+|+|||+
T Consensus 254 ~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~ 333 (434)
T 2gp6_A 254 FVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQ 333 (434)
T ss_dssp CCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCH
T ss_pred cceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCc
Confidence 99999999999999999999999999999999999999998888888888899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCC
Q 014349 320 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASK 399 (426)
Q Consensus 320 ~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~ 399 (426)
.+|.+|..++.++|+.+ ++++++.|.++||+++|+|++++++++++|+++++||++|+++|+|.+++++++ .+++
T Consensus 334 ~~D~~E~~al~~~fg~~----~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~ 408 (434)
T 2gp6_A 334 VGDLAEGRAINNALGGN----RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVA-GEPR 408 (434)
T ss_dssp HHHHHHHHHHHHHHTTC----CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECC-SSCC
T ss_pred cchHHHHHHHHHHhccC----CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC-CCcc
Confidence 99999999999999753 589999999999999999999999999999999999999999999999999998 6777
Q ss_pred CCCCcEEEEeccccccceeeeEeeec
Q 014349 400 DMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 400 ~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+++.|++++|||||||+|+|+||++|
T Consensus 409 ~~~~~~a~~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 409 PGNYRYAINNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp CSCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCEEEEeCCcCCCeeEEEEEEeC
Confidence 78899999999999999999999985
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-70 Score=583.21 Aligned_cols=390 Identities=21% Similarity=0.320 Sum_probs=344.8
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~ 79 (426)
|++|.|.++++||++|++|++.+++++. +|....|+ .....|++.+ .+.||+.+| +++++.+.|
T Consensus 13 ~r~P~~~~~~~~W~~l~~g~~~~~~~~~-~~~~~~~~-----------~~~~~g~~~~---~~~FD~~~f~i~~~ea~~m 77 (965)
T 3hhd_A 13 GKLPESENLQEFWDNLIGGVDMVTDDDR-RWKAGLYG-----------LPRRSGKLKD---LSRFDASFFGVHPKQAHTM 77 (965)
T ss_dssp EEBTTBSSHHHHHHHHHTTCCCEECSSS-SSCTTGGG-----------CCSCEECCSC---SSCCCTTTTTCCHHHHHTS
T ss_pred EECCCCCCHHHHHHHHHcCCCcccCCCc-cccccccc-----------CcccccccCC---hhhcChhhcCCCHHHHhhc
Confidence 5789999999999999999999999763 55433321 1233566654 567999999 999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
||+++|+++++++||+|||+++.+++ ..++|||+|++.+.+. .........+.++..++...++++++|++.
T Consensus 78 Dp~~rL~leaa~eALedAGi~~~~i~-~~~~Gv~vG~~~~d~~-------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~ 149 (965)
T 3hhd_A 78 DPQLRLLLEVTYEAIVDGGINPDSLR-GTHTGVWVGVSGSETS-------EALSRDPETLVGYSMVGCQRAMMANRLSFF 149 (965)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCGGGGT-TSCCEEEEEECCCHHH-------HHHTSCTTTCCTHHHHHHSTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCChHHcC-CceeEEEEeccchhHH-------HHHhcCccccCcccccccccchHHHHHHHH
Confidence 99999999999999999999998884 8899999998765432 223345667788888999999999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
||++||+++|+++|+|+++||++|+++|++|+||++||||+|.+++|..+..|...++++ |++.|+|||.+++|
T Consensus 150 lgl~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls------~~g~~~~Fd~~adG 223 (965)
T 3hhd_A 150 FDFRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS------PEGTCKAFDTAGNG 223 (965)
T ss_dssp HTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC------TTCCCCTTBTTCCS
T ss_pred hCCCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC------CCCccccchhccCC
Confidence 999999999999999999999999999999999999999999999999999999999998 67899999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
+++|||++++||+++++|+ +++++|+|++.++|+.+ .....+++.++.++++++|++||++|+||||||+|||||
T Consensus 224 ~~~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT 299 (965)
T 3hhd_A 224 YCRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGT 299 (965)
T ss_dssp BCBBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCC
T ss_pred ccccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCC
Confidence 9999999999999999885 48999999999999975 333345677889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCC----C-CC
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND----N-FM 393 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~----~-~~ 393 (426)
+.||++|..+|.++|+.. ...+++|+++|+++||+++|||++++++++++|++++|||++|+++|||.++. . .+
T Consensus 300 ~~gD~~E~~Al~~~f~~~-~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v 378 (965)
T 3hhd_A 300 KVGDPQELNGITRALCAT-RQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQV 378 (965)
T ss_dssp TTHHHHHHHHHHHHHCSS-CSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEE
T ss_pred CCCCHHHHHHHHHHhccc-CCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceee
Confidence 999999999999999754 23579999999999999999999999999999999999999999999999862 1 23
Q ss_pred ccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 394 PLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 394 ~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+ .++++++.+++++|||||||+|+|+||+++
T Consensus 379 ~-~~~~~~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 379 V-DQPLPVRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp C-CSCEECCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred c-CCCccCCCCeEEEecccCCCceEEEEeccC
Confidence 3 566778888999999999999999999975
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-70 Score=579.36 Aligned_cols=405 Identities=24% Similarity=0.363 Sum_probs=356.3
Q ss_pred CccCCC-CCHHHHHHHHHcCCCceeeCCccc-ccc-CCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhh
Q 014349 1 MVTPLG-CGAETTWRRLIVGECGIREITPED-LKM-GNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDH 76 (426)
Q Consensus 1 ~vsp~G-~~~~~~~~~l~~g~s~i~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~ 76 (426)
|++|.| .++++||++|++|++.++++|..+ |+. .+|+++... ....+.+.++++++ .+.||+.+| +++++.
T Consensus 15 ~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~--~~~~~~~~~~~l~~---~~~FD~~~f~i~~~ea 89 (915)
T 2qo3_A 15 CRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDN--PGTSYVDKGGFLDD---AAGFDAEFFGVSPREA 89 (915)
T ss_dssp EECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTS--TTCBSCCEEBCCSC---SSEECHHHHTCCHHHH
T ss_pred EECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCccccc--CCCcccceeEEeCC---ccccCHhhcCCCHHHH
Confidence 478998 999999999999999999999877 753 334443321 23456788999975 567999999 999999
Q ss_pred hccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHH
Q 014349 77 RSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHV 156 (426)
Q Consensus 77 ~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 156 (426)
+.|||+++|+++++++||+|||+++.+++ ..++|||+|++.+.+.... .....++++.+++...++++++|
T Consensus 90 ~~mdp~~rL~leaa~eALedAGi~~~~i~-~~~~gV~vG~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~~a~ri 160 (915)
T 2qo3_A 90 AAMDPQQRLLLETSWELVENAGIDPHSLR-GTATGVFLGVAKFGYGEDT--------AAAEDVEGYSVTGVAPAVASGRI 160 (915)
T ss_dssp HTSCHHHHHHHHHHHHHHHHTTCCGGGGT-TBCCEEEEECCCCCTTTTC--------C---CTTCHHHHTTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHcCCChHHcC-CcceEEEEEecCchHHhhh--------cccccccccccccccccHHHHHH
Confidence 99999999999999999999999988874 8899999999876653221 12335677888888899999999
Q ss_pred HHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC
Q 014349 157 SMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236 (426)
Q Consensus 157 ~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 236 (426)
++.||++||+++|+++|+|+++||+.|+++|++|+||++||+|+|.+++|..+..|...+.++ +++.|+|||.+
T Consensus 161 s~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls------~~g~~~~Fd~~ 234 (915)
T 2qo3_A 161 SYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA------ADGRSKAFGAG 234 (915)
T ss_dssp HHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC------SSCCCCTTBTT
T ss_pred HHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC------CCCCcccccCC
Confidence 999999999999999999999999999999999999999999999999999888999988888 56899999999
Q ss_pred CCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 014349 237 RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 316 (426)
Q Consensus 237 ~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgt 316 (426)
++|+++|||++++||+++++|+++|++++++|+|++.++|+.+...+.+.+.++.++++++|+++|++|+||||||+|||
T Consensus 235 adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~Hgt 314 (915)
T 2qo3_A 235 ADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGT 314 (915)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCC
T ss_pred CCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCC
Confidence 99999999999999999999999999999999999999999887667777888999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHhhccc-CCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcc
Q 014349 317 STPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL 395 (426)
Q Consensus 317 gt~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~ 395 (426)
||+.+|++|..++.++|+... ...+++++++|+++||+++|+|++++++++++|+++.|||++|+++|+|.++++..++
T Consensus 315 gT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~ 394 (915)
T 2qo3_A 315 GTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGV 394 (915)
T ss_dssp CCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSE
T ss_pred CCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCce
Confidence 999999999999999998532 2357899999999999999999999999999999999999999999999998763221
Q ss_pred ---ccC----CCCCCcEEEEeccccccceeeeEeeec
Q 014349 396 ---TAS----KDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 396 ---~~~----~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+. +...+|++++|||||||+|+|+||+++
T Consensus 395 ~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 395 ALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp EECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred eeecCCcccccCCCCcEEEEeeecCCCceEEEEEeec
Confidence 222 233579999999999999999999975
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-70 Score=579.90 Aligned_cols=395 Identities=26% Similarity=0.395 Sum_probs=348.6
Q ss_pred CccCCC-CCHHHHHHHHHcCCCceeeCCccc-cccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhh
Q 014349 1 MVTPLG-CGAETTWRRLIVGECGIREITPED-LKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHR 77 (426)
Q Consensus 1 ~vsp~G-~~~~~~~~~l~~g~s~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~ 77 (426)
|++|.| .++++||++|++|+++|+++|..+ |. .....++++++++ .+.||+.+| +++++.+
T Consensus 48 ~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~-------------~~~~~~~~~~l~~---~~~fD~~~f~i~~~ea~ 111 (917)
T 2hg4_A 48 CRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWE-------------PDPDARLGGMLAA---AGDFDAGFFGISPREAL 111 (917)
T ss_dssp EEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCC-------------CCSSCCEEBCCTT---TTEECTGGGTCCHHHHH
T ss_pred EECCCCCCCHHHHHHHHHcCCCccccCCcccccC-------------CCCCcceeeEecC---ccccChhhcCCCHHHHH
Confidence 478987 679999999999999999999776 42 1123678999975 567999999 9999999
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH
Q 014349 78 SIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 78 ~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 157 (426)
.|||+++|+++++++||+|||+++.+++ ..++|||+|++.+.+.... ......+.++.+++...++++++|+
T Consensus 112 ~mdp~~rl~leaa~eALedAGi~~~~i~-~~~~gV~vG~~~~d~~~~~-------~~~~~~~~~~~~~g~~~~~~a~ris 183 (917)
T 2hg4_A 112 AMDPQQRIMLEISWEALERAGHDPVSLR-GSATGVFTGVGTVDYGPRP-------DEAPDEVLGYVGTGTASSVASGRVA 183 (917)
T ss_dssp HSCHHHHHHHHHHHHHHHHTTCCGGGGT-TSCEEEEEEECCCCCSCCT-------TSSCGGGGGGHHHHHCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHcCCChHHcC-CcceEEEEEeCCchhhhhh-------hcCccccCcccccccccchHHHHHH
Confidence 9999999999999999999999988874 8899999999866543211 1233446677778888899999999
Q ss_pred HHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 158 MKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 158 ~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
+.||++||+++|+++|+|+++||+.|+++|++|+||++||||+|.++++..+..|...+.++ |++.|+|||.++
T Consensus 184 ~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls------~~g~~~pFd~~a 257 (917)
T 2hg4_A 184 YCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA------ADGRCKPFSKAA 257 (917)
T ss_dssp HHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC------TTSCCCTTBTTC
T ss_pred HhcCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC------CccccCcccccc
Confidence 99999999999999999999999999999999999999999999999998888888888887 668999999999
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 317 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtg 317 (426)
+|+++|||++++||+++++|+++|++++++|+|++.++|+.+...+.+...++.++++++|+++|++|+||||||+||||
T Consensus 258 dG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtg 337 (917)
T 2hg4_A 258 DGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTG 337 (917)
T ss_dssp CCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCC
T ss_pred cCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCC
Confidence 99999999999999999999999999999999999999998876667778888999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhccc-CCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcc-
Q 014349 318 TPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL- 395 (426)
Q Consensus 318 t~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~- 395 (426)
|+.+|++|..++.++|+... ...+++++++|+++||+++|+|++++++++++|++++|||++|+++|||.++++..++
T Consensus 338 T~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~ 417 (917)
T 2hg4_A 338 TRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVS 417 (917)
T ss_dssp CTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCE
T ss_pred CccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccee
Confidence 99999999999999998632 2357889999999999999999999999999999999999999999999998765221
Q ss_pred --ccCCCC----CCcEEEEeccccccceeeeEeeec
Q 014349 396 --TASKDM----PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 396 --~~~~~~----~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+.++| .+|++++|||||||+|+|+||+++
T Consensus 418 v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 418 VVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp ECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred ecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccC
Confidence 333333 469999999999999999999975
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-68 Score=615.93 Aligned_cols=390 Identities=22% Similarity=0.310 Sum_probs=344.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~ 79 (426)
|++|.|.++++||++|.+|++++++.+ .+|....|+ ..+.+|++++ .+.||+.+| +++++.+.|
T Consensus 11 ~~~p~~~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~~-----------~~~~~g~~~~---~~~fd~~~f~i~~~ea~~~ 75 (2512)
T 2vz8_A 11 GKLPESENLEEFWANLIGGVDMVTADD-RRWKAGLYG-----------LPRRMGKLKD---LSRFDASFFGVHSKQANTM 75 (2512)
T ss_dssp EEBTTBSSHHHHHHHHHTTCCCEEECS-SSSCTTGGG-----------CCSEEECCSC---SSCCCTTTTTCCHHHHHTS
T ss_pred eeCCCCCCHHHHHHHHHcCCccccCCC-ccccccccc-----------CcccceecCC---cccCCHhhcCCCHHHHHhc
Confidence 578999999999999999999999965 455433221 1245677765 567999999 999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
||++||+++++++||+|||+++.++ ...++|||+|++.+++.. ........++++..++...++++++|++.
T Consensus 76 dpq~rl~l~~~~eAle~Ag~~~~~~-~~~~~gv~~G~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~a~ris~~ 147 (2512)
T 2vz8_A 76 DPQLRMLLEVTYEAIVDGGINPASL-RGTSTGVWVGVSSSDASE-------ALSRDPETLVGYSMIGCQRAMMANRLSFF 147 (2512)
T ss_dssp CHHHHHHHHHHHHHHGGGTCCGGGG-TTCSCEEEEEECCCHHHH-------HTTSCTTTSCGGGGGGTSTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCChhhc-CCCCeEEEEEeccHHHHH-------HHhcCccccCcceecccchhHHHHHHHHH
Confidence 9999999999999999999988776 488999999998654322 12334556788889999999999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|||+||+++|+++|+|+++||++|+++|++|+||++||||++.+++|..+..|..+++++ |++.|||||.+++|
T Consensus 148 ~~l~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls------~~g~c~~Fd~~adG 221 (2512)
T 2vz8_A 148 FDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS------QDGTCRSFDAEGTG 221 (2512)
T ss_dssp HTCCSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC------TTCSCCSSSTTCCC
T ss_pred hCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC------CCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998 67999999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 318 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt 318 (426)
|++|||++++|||++++|+ +||++|+|++.++||.+ .....|++.+++++|++||++||++|+||||||+|||||
T Consensus 222 ~~~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT 297 (2512)
T 2vz8_A 222 YCRAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGT 297 (2512)
T ss_dssp BCBBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCC
T ss_pred cceeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCC
Confidence 9999999999999999986 59999999999999964 222334678889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC-CC----CC
Q 014349 319 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFN-DN----FM 393 (426)
Q Consensus 319 ~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~-~~----~~ 393 (426)
+.||++|+.||.++|+... ..+++|+|+|+++||+++|||++++++++++|+++.|||++|+++|+|.++ +. .+
T Consensus 298 ~~gD~~E~~al~~~f~~~~-~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~ 376 (2512)
T 2vz8_A 298 KVGDPQELNGIVNALCATR-REPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQV 376 (2512)
T ss_dssp TTHHHHHHHHHHHHHCSCS-SSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEE
T ss_pred CCCCHHHHHHHHHHhcccC-CCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEe
Confidence 9999999999999998532 357899999999999999999999999999999999999999999999986 43 22
Q ss_pred ccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 394 PLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 394 ~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+ .++++|+.+++++|||||||+|+|+||+++
T Consensus 377 ~-~~~~~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 377 V-DRPLPIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp C-CSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred c-CCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence 3 466777778999999999999999999874
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-64 Score=549.88 Aligned_cols=393 Identities=23% Similarity=0.257 Sum_probs=342.2
Q ss_pred CCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhccCHHHH
Q 014349 6 GCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARFIA 84 (426)
Q Consensus 6 G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~~~~~~ 84 (426)
..+.++||++|++|++.+.+.. ..++.+++|+++++ ||+.+| ++++..+.|||+++
T Consensus 1132 ~~~~~~~w~~L~~G~~~i~p~~------------------~~~~~~~aG~i~~~-----FD~~~fgI~~~ea~~mDp~~~ 1188 (1878)
T 2uv9_A 1132 IPETGQYTVRLRKGATLLIPKA------------------LQFDRLVAGQIPTG-----WDARRYGVPEDIIQQVDPVTL 1188 (1878)
T ss_dssp CTTTSCEEEEECTTCEEEEEEE------------------ECCSCCEEEECCTT-----CCHHHHTCCHHHHHHSCHHHH
T ss_pred CCChHHHHHHHHcCCCeeeecC------------------CCCcceEEEEeCCC-----CCHhhcCCCHHHHHhcCHHHH
Confidence 3567899999999999998832 13567899999853 999999 99999999999999
Q ss_pred HHHHHHHHHHHHcCCC-CCC----CCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH-
Q 014349 85 YALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM- 158 (426)
Q Consensus 85 l~~~a~~~Al~dAGl~-~~~----~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~- 158 (426)
|+++++++||++||++ +.+ + ...++||++|++++++..+..++...... ..+.++.+++++.|.++++|++
T Consensus 1189 l~L~aa~eAL~~AGi~~p~e~~~~i-~~s~vGv~vGsg~gg~~~~~~~~~~~~~~--~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1189 YVLVSVAEALLSSGITDPYEFYKYV-HLSEVGNCIGSGVGGTSALRGMYKDRYLD--KPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHTTTCSSGGGHHHHS-CGGGEEEEEEESSCCHHHHHHHHTTTTTT--CCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCChhhhhccc-CccceEEEEccCCccHHHHHHHHHHHHhc--CCCCchhhhcchHHHHHHHHHHH
Confidence 9999999999999997 555 4 47899999999999988777665543322 2377888899999999999999
Q ss_pred HcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccc-----cCCCCCCCCccc
Q 014349 159 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-----YNGTPQEASRPF 233 (426)
Q Consensus 159 ~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~pf 233 (426)
.||++||+++++++|+|++.||+.|++.|++|+||++||||+|. +++.....|..+++++.. .+.+|++.||||
T Consensus 1266 ~lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPf 1344 (1878)
T 2uv9_A 1266 LLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPT 1344 (1878)
T ss_dssp TCCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSS
T ss_pred hcCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCC
Confidence 59999999999999999999999999999999999999999998 778888899999999842 244688999999
Q ss_pred ccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCC-h-------------------------
Q 014349 234 DCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID-G------------------------- 287 (426)
Q Consensus 234 ~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~-~------------------------- 287 (426)
+..++||++|||++++||++++.|+++|.+||++|.|+++++|+.+.+.|.|. +
T Consensus 1345 d~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~ 1424 (1878)
T 2uv9_A 1345 STTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQ 1424 (1878)
T ss_dssp BTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHH
T ss_pred ccCCCCCcccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHH
Confidence 99999999999999999999999999999999999999999999865444330 0
Q ss_pred -----------------------------------------HHHH-------------------------------HHHH
Q 014349 288 -----------------------------------------KGAI-------------------------------LAMT 295 (426)
Q Consensus 288 -----------------------------------------~~~~-------------------------------~a~~ 295 (426)
..++ .+|+
T Consensus 1425 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir 1504 (1878)
T 2uv9_A 1425 LELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLR 1504 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHH
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHH
Confidence 0111 6899
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcc--cCCCcceecccccccchhHHhHHHHHHHHHHHHHHhC
Q 014349 296 RALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDH--ATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHG 373 (426)
Q Consensus 296 ~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~--~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~ 373 (426)
+||+++||+++||||||+|||||+.||++|..+|.++|+.. ..+.++++++.|+++||+.||+|++++++++++|++|
T Consensus 1505 ~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g 1584 (1878)
T 2uv9_A 1505 GALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTG 1584 (1878)
T ss_dssp HHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999862 2346799999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCCC-CCCCCcc-ccCCC-CCCcEEEEeccccccceeeeEeeec
Q 014349 374 VAPLTLNLAKPDPIF-NDNFMPL-TASKD-MPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 374 ~~pp~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+||++|++.|+|.+ +++++.+ .++++ ..+|++++|||||||+|+|+||+++
T Consensus 1585 ~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1639 (1878)
T 2uv9_A 1585 IVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639 (1878)
T ss_dssp EECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred CCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecC
Confidence 999999999999999 4676521 33333 3689999999999999999999874
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-63 Score=546.45 Aligned_cols=391 Identities=22% Similarity=0.294 Sum_probs=340.6
Q ss_pred CCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhccCHHHHH
Q 014349 7 CGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARFIAY 85 (426)
Q Consensus 7 ~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~~~~~~l 85 (426)
.++++||++|++|++.+.+.+. .++.+++|+++++ ||+.+| ++++..+.|||+++|
T Consensus 1158 ~~~~~~w~~L~~G~~~i~p~~~------------------~~~~~~aG~i~~~-----FD~~~fgI~~~ea~~mDp~~~l 1214 (1887)
T 2uv8_A 1158 PETGEYSVKLLKGATLYIPKAL------------------RFDRLVAGQIPTG-----WNAKTYGISDDIISQVDPITLF 1214 (1887)
T ss_dssp TTTSCEEEEECTTCEEEEEEEE------------------CCSCCEEECCCTT-----CCTTTTTCCHHHHHHSCHHHHH
T ss_pred CchHHHHHHHHcCCceeecccC------------------CCCccEEEEECCC-----CChhhcCCCHHHHHhcCHHHHH
Confidence 3578999999999999988432 3567899999842 999999 999999999999999
Q ss_pred HHHHHHHHHHHcCCC-CCC----CCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH-
Q 014349 86 ALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK- 159 (426)
Q Consensus 86 ~~~a~~~Al~dAGl~-~~~----~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~- 159 (426)
+++++++||++||++ +.+ + +..++||++|++++++......+...... ..+.++.++.++.|.++++|++.
T Consensus 1215 ~L~aa~eAL~dAGi~dp~e~~~~i-~~s~vGv~vGs~~gg~~~~~~~~~~~~~~--~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1215 VLVSVVEAFIASGITDPYEMYKYV-HVSEVGNCSGSGMGGVSALRGMFKDRFKD--EPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHTTCSSGGGHHHHS-CGGGEEECCEESSCCHHHHHHHHTTTTTT--CCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCChhhhhccc-CCceeEEEeccCCccHHHHHHHHHHHHhc--CCCCcchhhcchhhHHHHHHHHHH
Confidence 999999999999995 655 4 47899999999999988777665543322 24778888899999999999995
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccc-----cCCCCCCCCcccc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-----YNGTPQEASRPFD 234 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~pf~ 234 (426)
||++||+++++++|+|++.||+.|++.|++|+||++||||+|. +++.....|..+++++.. .+.+|++.||||+
T Consensus 1292 lgl~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd 1370 (1887)
T 2uv8_A 1292 ISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPAT 1370 (1887)
T ss_dssp TCCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTB
T ss_pred cCCccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCc
Confidence 9999999999999999999999999999999999999999998 678888899999999842 1345778999999
Q ss_pred cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCC------------------hH--------
Q 014349 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID------------------GK-------- 288 (426)
Q Consensus 235 ~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~------------------~~-------- 288 (426)
..++||++|||++++||++++.|+++|++||++|.|+++++|+.+.+.|.|. ..
T Consensus 1371 ~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ 1450 (1887)
T 2uv8_A 1371 TTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKR 1450 (1887)
T ss_dssp TTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHH
T ss_pred ccCCCcccccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHH
Confidence 9999999999999999999999999999999999999999999865443331 10
Q ss_pred -----------------------------------HH-------------------------------HHHHHHHHHHcC
Q 014349 289 -----------------------------------GA-------------------------------ILAMTRALKQSG 302 (426)
Q Consensus 289 -----------------------------------~~-------------------------------~~a~~~al~~ag 302 (426)
.+ ..+|++||+++|
T Consensus 1451 ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AG 1530 (1887)
T 2uv8_A 1451 QLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYG 1530 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcC
Confidence 11 268999999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhhc--ccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCC
Q 014349 303 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD--HATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 380 (426)
Q Consensus 303 l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~--~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~ 380 (426)
|+|+||||||+|||||+.||++|..+|.++|+. ...+.++++++.|+++||+.||+|++++++++++|++|.|||++|
T Consensus 1531 l~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n 1610 (1887)
T 2uv8_A 1531 LTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRN 1610 (1887)
T ss_dssp CCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTT
T ss_pred CCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCC
Confidence 999999999999999999999999999999975 223457999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCCC--ccccCCCC-CCcEEEEeccccccceeeeEeeec
Q 014349 381 LAKPDPIFN-DNFM--PLTASKDM-PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 381 ~~~~~~~~~-~~~~--~~~~~~~~-~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++.|+|.++ ++++ + .+.+++ .+|++++|||||||+|+|+||+++
T Consensus 1611 ~d~~dp~l~~~~~l~~~-~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1658 (1887)
T 2uv8_A 1611 ADNVDKILEQFEYVLYP-SKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1658 (1887)
T ss_dssp CSSBCGGGGGCTTEECC-SSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred CCCCCCccccccccccc-cccccCCCCCEEEEccCCCCCccEEEEEecC
Confidence 999999984 6654 4 344444 689999999999999999999874
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-66 Score=546.95 Aligned_cols=391 Identities=22% Similarity=0.279 Sum_probs=337.1
Q ss_pred CCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhccCHHHHH
Q 014349 7 CGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARFIAY 85 (426)
Q Consensus 7 ~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~~~~~~l 85 (426)
.++++||++|++|++.+.+.. ..++.+++|++++ .||+.+| ++++..+.|||+++|
T Consensus 959 ~~~eefW~~L~~G~~~i~p~~------------------~~~~~~vaG~Ip~-----gFD~~~fGIs~~ea~~mDP~qrL 1015 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPKA------------------LRFDRLVAGQIPT-----GWNAKTYGISDDIISQVDPITLF 1015 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCCC------------------CCEECCSSCSCCC-----CCCCCCSSCCTTTBTTBCSSTTH
T ss_pred CCHHHHHHHHHcCCCEEecCC------------------CCCCceEEEEECC-----CCChhhCCCCHHHHhccCHHHHH
Confidence 357899999999999998732 2355678899974 2999999 999999999999999
Q ss_pred HHHHHHHHHHHcCCC-CCC----CCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH-H
Q 014349 86 ALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM-K 159 (426)
Q Consensus 86 ~~~a~~~Al~dAGl~-~~~----~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~-~ 159 (426)
+++++++||++||++ +.+ + +..++||++|++.+++......+..... ...+.++.++..+.|.++++++. .
T Consensus 1016 aLeAa~EALedAGI~dP~ei~~~i-~~s~vGV~vGSg~Gg~~~l~~~~~~~~~--~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1016 VLVSVVEAFIASGITDPYEMYKYV-HVSEVGNCSGSGMGGVSALRGMFKDRFK--DEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp HHHHHHHHHTTTTCSSGGGGGGGT-CCSCSCCCCCCCSCCCSSHHHHHHSSSS--CCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHcCCCChHHhcccc-CCceEEEEecccCCCHHHHHHHHHHHHh--cCCCCcchhccccHHHHHHHHHHHH
Confidence 999999999999997 555 4 4789999999999998877666543322 22377888889999999999999 7
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccc-----cCCCCCCCCcccc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-----YNGTPQEASRPFD 234 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~pf~ 234 (426)
||++||+++++++|+|++.||+.|+++|++|+||++||||+|. +++.....|..+++++.. .+.+|++.||||+
T Consensus 1093 LGl~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd 1171 (1688)
T 2pff_A 1093 ISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPAT 1171 (1688)
T ss_dssp CCCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSS
T ss_pred cCCcCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCc
Confidence 9999999999999999999999999999999999999999998 466667778888888742 1345789999999
Q ss_pred cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCC--------------------C------h-
Q 014349 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI--------------------D------G- 287 (426)
Q Consensus 235 ~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~--------------------~------~- 287 (426)
.+++||++||||+++||++++.|+++|.+||++|.|++.++|+.+.+.|.| . .
T Consensus 1172 ~~rdGfv~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~r 1251 (1688)
T 2pff_A 1172 TTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKR 1251 (1688)
T ss_dssp SSCCCCCCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHH
T ss_pred cCCCCCccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHH
Confidence 999999999999999999999999999999999999999999875433222 1 0
Q ss_pred ----------------------------------HHH-------------------------------HHHHHHHHHHcC
Q 014349 288 ----------------------------------KGA-------------------------------ILAMTRALKQSG 302 (426)
Q Consensus 288 ----------------------------------~~~-------------------------------~~a~~~al~~ag 302 (426)
..+ .+++++||+++|
T Consensus 1252 ql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AG 1331 (1688)
T 2pff_A 1252 QLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYG 1331 (1688)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcC
Confidence 011 367999999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcc--cCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCC
Q 014349 303 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDH--ATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 380 (426)
Q Consensus 303 l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~--~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~ 380 (426)
++|+||||||+|||||+.||++|..+|.++|+.. ..+.++++++.|+++||+.||||++++++++++|++|.|||++|
T Consensus 1332 LtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln 1411 (1688)
T 2pff_A 1332 LTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRN 1411 (1688)
T ss_dssp SSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSC
T ss_pred CCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999999999999999862 23457999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCCC--ccccCCCC-CCcEEEEeccccccceeeeEeeec
Q 014349 381 LAKPDPIFN-DNFM--PLTASKDM-PISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 381 ~~~~~~~~~-~~~~--~~~~~~~~-~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++.|+|.++ ++++ + .+.+++ .+|++++|||||||+|+|+||+++
T Consensus 1412 ~d~pdp~l~~~d~v~~p-~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p 1459 (1688)
T 2pff_A 1412 ADNVDKILEQFEYVLYP-SKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1459 (1688)
T ss_dssp CSCCCTTCCSSCCCCSC-TTCCSSSSSSCCCCCCCCSTTCCCCCCEECS
T ss_pred CCCCCCCCCcCCceeec-CccccCCCCcEEEEeeECCCCeeEEEEEeCC
Confidence 999999994 6655 4 444444 689999999999999999999875
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-59 Score=537.07 Aligned_cols=414 Identities=22% Similarity=0.296 Sum_probs=343.9
Q ss_pred cCCCCCHHHHHHHHHcCCC--ceeeCCc-cccccC-CCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhh
Q 014349 3 TPLGCGAETTWRRLIVGEC--GIREITP-EDLKMG-NFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHR 77 (426)
Q Consensus 3 sp~G~~~~~~~~~l~~g~s--~i~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~ 77 (426)
++.-.+.++.|+...++.+ .|.+.+. ..|... .+.+.........++++++|++++ .||+.+| +++++.+
T Consensus 2568 ~~~~~s~~~a~~~~~~~~~~~~i~~~~~~~~W~~~~~~~~~i~~p~~~~~~~~~gG~i~d-----~FD~~~fgIs~rea~ 2642 (3089)
T 3zen_D 2568 TFVVSSEADARAFVQFDPEHTVARPLPDSSDWEVTRKAGTEIRVPRKTKLSRTVGAQIPT-----GFDPTVWGISPDMAS 2642 (3089)
T ss_dssp CCEEECHHHHHHHHTTSTTSEEEEECTTTCCEEEEECTTCEEEEEEEECCSCCEEECCCT-----TCCTTTTTCCHHHHH
T ss_pred CcccCCHHHHHHHHHhCCCcceEEeCCCCcceeeeecCCCCcCCCCcCCccceEEEEcCC-----CCChhhcCCCHHHHH
Confidence 3444567888888877543 4566654 456432 222222222234578899999974 3999999 9999999
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCCCCCC---CCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHH
Q 014349 78 SIARFIAYALCAADEALHDAKWLPSDQG---QKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASG 154 (426)
Q Consensus 78 ~~~~~~~l~~~a~~~Al~dAGl~~~~~~---~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 154 (426)
.|||+++|+++++++||+|||+++.+++ ++.++|||+|++.+++......+..+.. +....++ .++..+.+..++
T Consensus 2643 ~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~aa 2720 (3089)
T 3zen_D 2643 SIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLL-GRAKPND-ILQEVLPNVVAA 2720 (3089)
T ss_dssp HSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHT-TCCCCTT-HHHHTSTTHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhc-CCCccch-hhccccccHHHH
Confidence 9999999999999999999999987652 4789999999999998888777766554 3333333 467778899999
Q ss_pred HHHHH-cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhccc-----ccCCCCCC
Q 014349 155 HVSMK-YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT-----KYNGTPQE 228 (426)
Q Consensus 155 ~i~~~-lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 228 (426)
+++.. ||++||+++|+++|+|+++||+.|+++|++|+||++||||+|. +++..+..|..+++++. ..+.+|+.
T Consensus 2721 ~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~ 2799 (3089)
T 3zen_D 2721 HVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSK 2799 (3089)
T ss_dssp HHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTT
T ss_pred HHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCccc
Confidence 99875 5999999999999999999999999999999999999999998 78888899999998763 22456889
Q ss_pred CCcccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCCh-------HHHHHHHHHHHHHc
Q 014349 229 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDG-------KGAILAMTRALKQS 301 (426)
Q Consensus 229 ~~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~-------~~~~~a~~~al~~a 301 (426)
.|+|||.+++|+++||||+++||+++++|+++|++||++|.+.+.++|+.+...+.+.. .++.++++++|+++
T Consensus 2800 ~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~A 2879 (3089)
T 3zen_D 2800 FSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQL 2879 (3089)
T ss_dssp SCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTT
T ss_pred ccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999998866655531 24467899999999
Q ss_pred CCCCCCccEEEecCCCCCCCCHHHHH---HHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCC
Q 014349 302 GLQSHQVDYVNAHATSTPLGDTVEAT---AIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLT 378 (426)
Q Consensus 302 gl~~~dId~v~~hgtgt~~~D~~E~~---a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~ 378 (426)
|++|+||||||+|||||+.||++|.. ++.++|+... +.+++|++.|+++||+++|||++++++++++|++++|||+
T Consensus 2880 Gl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~-~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt 2958 (3089)
T 3zen_D 2880 GVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAP-GNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPN 2958 (3089)
T ss_dssp TCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCT-TCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCC
T ss_pred CCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccC-CCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCC
Confidence 99999999999999999999999999 6778887542 2579999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC--CCccccCC----CCCCcEEEEeccccccceeeeEeeec
Q 014349 379 LNLAKPDPIFNDN--FMPLTASK----DMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 379 ~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+|++.|+|.++.+ +....+++ ..++|++++|||||||+|+|+||+++
T Consensus 2959 ~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~ 3011 (3089)
T 3zen_D 2959 RSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHP 3011 (3089)
T ss_dssp TTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECG
T ss_pred CCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecC
Confidence 9999999998721 11112333 33589999999999999999999985
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-36 Score=291.54 Aligned_cols=271 Identities=23% Similarity=0.326 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
..+|+++++++||+|||+++++++ ++++|+..+... ...++.+++..+|
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id-----~v~~g~~~~~~~--------------------------~~~~a~~ia~~lg 78 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVS-----EVIFGHVLAAGC--------------------------GQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTTS--------------------------CSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCCC--------------------------CCHHHHHHHHHcC
Confidence 478999999999999999888776 789987543310 1356789999999
Q ss_pred C--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHH-------------------HH----H--h
Q 014349 162 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSM-------------------AG----F--C 213 (426)
Q Consensus 162 l--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~~-------------------~~----~--~ 213 (426)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++. |... .+ + .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 7999999999999999999999999999999999999998763 2100 00 0 0
Q ss_pred hhhhccc-------------------------------ccC----------------CCCCC------------CCcc-c
Q 014349 214 KSRALTT-------------------------------KYN----------------GTPQE------------ASRP-F 233 (426)
Q Consensus 214 ~~~~l~~-------------------------------~~~----------------~~~~~------------~~~p-f 233 (426)
.++.+++ ... .+++. .++| |
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf 238 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF 238 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSS
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 0111110 000 00111 4889 9
Q ss_pred ccCCCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 014349 234 DCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306 (426)
Q Consensus 234 ~~~~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 306 (426)
+.+++|++ ++|||+++||++++.|+++|.+++++|.|++.+++ .|.+.+.+...+++++|+++|++|+
T Consensus 239 d~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (397)
T 1wl4_A 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLE 313 (397)
T ss_dssp CCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHH
Confidence 99999999 99999999999999999999999999999998873 4544556678999999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHH--HHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCC
Q 014349 307 QVDYVNAHATSTPLGDTVEAT--AIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 384 (426)
Q Consensus 307 dId~v~~hgtgt~~~D~~E~~--a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~ 384 (426)
||||||+| |..|.. ++.+.|+... .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ie~~-------d~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~----------- 373 (397)
T 1wl4_A 314 DVDIFEIN-------EAFAAVSAAIVKELGLNP--EKVNIEGGAIALGHPLGASGCRILVTLLHTLERM----------- 373 (397)
T ss_dssp GCCEEEEC-------CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-----------
T ss_pred HCCEEEEe-------cccHHHHHHHHHHcCCCC--cCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc-----------
Confidence 99999998 444543 3667776532 3688999999999999999999999999999984
Q ss_pred CCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 385 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..+++++++.+.||.+.++||++.
T Consensus 374 -----------------~~~~gl~~~~~ggG~~~a~~~e~~ 397 (397)
T 1wl4_A 374 -----------------GRSRGVAALCIGGGMGIAMCVQRE 397 (397)
T ss_dssp -----------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred -----------------CCCEEEEEEecccchheEEEEEeC
Confidence 135888888888899999999873
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=291.32 Aligned_cols=274 Identities=20% Similarity=0.243 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
..+|+++|+++||+|||+++.+++ +|++|+..+... ..+..+.+++..+|
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id-----~v~~g~~~~~~~-------------------------~~~~~a~~va~~lG 75 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVE-----DVYAGCANQAGE-------------------------DNRNVARMALLLAG 75 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCSST-------------------------TTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCCC-------------------------CCChHHHHHHHHhC
Confidence 467999999999999999988876 899998543310 02456889999999
Q ss_pred C--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH--------------H----------HHHh-
Q 014349 162 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS--------------M----------AGFC- 213 (426)
Q Consensus 162 l--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~--------------~----------~~~~- 213 (426)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++. |.. + .++.
T Consensus 76 l~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p 155 (401)
T 1ulq_A 76 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQ 155 (401)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHH
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 7899999999999999999999999999999999999997654 220 0 0110
Q ss_pred -h-----hhhc---------------------cc----------ccCC----------------CCCC------------
Q 014349 214 -K-----SRAL---------------------TT----------KYNG----------------TPQE------------ 228 (426)
Q Consensus 214 -~-----~~~l---------------------~~----------~~~~----------------~~~~------------ 228 (426)
. ++.. +. .... ++++
T Consensus 156 ~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~ 235 (401)
T 1ulq_A 156 ALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLA 235 (401)
T ss_dssp HHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHH
T ss_pred cccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHh
Confidence 0 1110 00 0000 0111
Q ss_pred CCcc-cccCCCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHH
Q 014349 229 ASRP-FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 300 (426)
Q Consensus 229 ~~~p-f~~~~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~ 300 (426)
.++| |+. +|++ ++|||+++||++++.|+++|.+++++|.|++.+++. |...+.+...+++++|++
T Consensus 236 ~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~ 308 (401)
T 1ulq_A 236 ALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVP-----PRIMGIGPVPATRKALER 308 (401)
T ss_dssp HSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHH
T ss_pred hCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCC-----ccccchhHHHHHHHHHHH
Confidence 3466 764 6777 799999999999999999999999999999998863 333345568999999999
Q ss_pred cCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCC
Q 014349 301 SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLN 380 (426)
Q Consensus 301 agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~ 380 (426)
+|++|+||||||+|.+.+. .|...++. |+......+++++..+..+||+.+|+|+.++++++++|+++
T Consensus 309 Agl~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~------- 376 (401)
T 1ulq_A 309 AGLSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR------- 376 (401)
T ss_dssp TTCCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT-------
T ss_pred cCCCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc-------
Confidence 9999999999999955443 24444433 33211123566677777899999999999999999999985
Q ss_pred CCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 381 LAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+.++++++++++||.|+++||+++
T Consensus 377 ---------------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 ---------------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp ---------------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ---------------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 246999999999999999999985
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=294.55 Aligned_cols=277 Identities=19% Similarity=0.272 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dA-Gl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
+..+|+++++++||+|| |+++++++ +|++|+..+... ..+.++.+++..
T Consensus 29 ~~~~L~~~a~~~AL~dA~gl~~~~id-----~v~~g~~~~~~~-------------------------~~~~~a~~ia~~ 78 (390)
T 1wdk_C 29 RAEDMSAHLISKVLERNSKVDPGEVE-----DVIWGCVNQTLE-------------------------QGWNIARMASLM 78 (390)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCGGGEE-----EEEEECSSBSBT-------------------------TTTTHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCC-----EEEEEeeccccC-------------------------CCCcHHHHHHHH
Confidence 35789999999999999 99877665 899987543210 124678899999
Q ss_pred cCC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHH------------------HHHhhhhh-
Q 014349 160 YGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSM------------------AGFCKSRA- 217 (426)
Q Consensus 160 lgl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~~------------------~~~~~~~~- 217 (426)
||+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++. |... ......+.
T Consensus 79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 158 (390)
T 1wdk_C 79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLG 158 (390)
T ss_dssp SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHH
T ss_pred cCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHH
Confidence 999 8999999999999999999999999999999999999997643 2210 01100000
Q ss_pred ----cccc---------------------cCCC--C------CCCCcccccC---------------------CCcce--
Q 014349 218 ----LTTK---------------------YNGT--P------QEASRPFDCG---------------------RDGFV-- 241 (426)
Q Consensus 218 ----l~~~---------------------~~~~--~------~~~~~pf~~~---------------------~~G~~-- 241 (426)
++.. ..++ | .+.++|||.+ ++|++
T Consensus 159 ~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~ 238 (390)
T 1wdk_C 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTA 238 (390)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEec
Confidence 1110 0000 1 1123789888 79999
Q ss_pred -----eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 014349 242 -----IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHAT 316 (426)
Q Consensus 242 -----~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgt 316 (426)
++|||+++||++++.|+++|.+++++|.|++.+++ .|.+.+.+...+++++|+++|++|+||||||+|.+
T Consensus 239 ~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 313 (390)
T 1wdk_C 239 GTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGV-----DPAIMGYGPVPATQKALKRAGLNMADIDFIELNEA 313 (390)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCS
T ss_pred hhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEecc-----ChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccC
Confidence 99999999999999999999999999999998874 34444556789999999999999999999999977
Q ss_pred CCCCCCHHHHHHHHHHhhcccC-CCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCcc
Q 014349 317 STPLGDTVEATAIRTVFSDHAT-SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPL 395 (426)
Q Consensus 317 gt~~~D~~E~~a~~~~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~ 395 (426)
.|. |..++.+.|+.... ..++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 f~~-----~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~---------------------- 366 (390)
T 1wdk_C 314 FAA-----QALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN---------------------- 366 (390)
T ss_dssp BHH-----HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred CHH-----HHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc----------------------
Confidence 654 56667777764310 13577888999999999999999999999999985
Q ss_pred ccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 396 TASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 396 ~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..+++++.+.+.||.+.++||+++
T Consensus 367 ------~~~~gl~~~~~ggG~~~a~~~~~~ 390 (390)
T 1wdk_C 367 ------GGTFGLSTMCIGLGQGIATVFERV 390 (390)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ------CCCEEEEEecccchheEEEEEEeC
Confidence 135778888888999999999873
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=285.45 Aligned_cols=274 Identities=19% Similarity=0.281 Sum_probs=210.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
..+|+++|+++||+|||+++.+++ +|++|+..+... ..+.++.+++..+|
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id-----~vi~g~~~~~~~-------------------------~~~~~a~~va~~lG 104 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVG-----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 104 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----CEEEECCSSBHH-------------------------HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCccC-------------------------CCChHHHHHHHHcC
Confidence 568999999999999999988876 799988543311 12456789999999
Q ss_pred C--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH--------------HH-------HHH------
Q 014349 162 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL--------------SM-------AGF------ 212 (426)
Q Consensus 162 l--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~--------------~~-------~~~------ 212 (426)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++... .+ .+.
T Consensus 105 l~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~ 184 (442)
T 2wu9_A 105 FPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVA 184 (442)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHH
T ss_pred CCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHH
Confidence 9 789999999999999999999999999999999999999865411 00 000
Q ss_pred ----------------hh--------hhhccccc--------C----------CCCCC------------CCcc-cccCC
Q 014349 213 ----------------CK--------SRALTTKY--------N----------GTPQE------------ASRP-FDCGR 237 (426)
Q Consensus 213 ----------------~~--------~~~l~~~~--------~----------~~~~~------------~~~p-f~~~~ 237 (426)
+. .+.+.... . .+.++ .++| |+.
T Consensus 185 ~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~-- 262 (442)
T 2wu9_A 185 QRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK-- 262 (442)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--
Confidence 00 00111000 0 00111 3456 764
Q ss_pred Ccce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 014349 238 DGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDY 310 (426)
Q Consensus 238 ~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 310 (426)
+|++ ++|||+++||++++.|+++|.+|+++|.|++.+++ .|...+.+...+++++|+++|++|+||||
T Consensus 263 ~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DId~ 337 (442)
T 2wu9_A 263 DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGV-----DPAIMGIGPAVAIPAAVKAAGLELDDIDL 337 (442)
T ss_dssp TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHTTCCGGGCCE
T ss_pred CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecC-----CchhcchHHHHHHHHHHHHcCCCHHHCCE
Confidence 6777 69999999999999999999999999999999876 34444556789999999999999999999
Q ss_pred EEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCC
Q 014349 311 VNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 390 (426)
Q Consensus 311 v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~ 390 (426)
||+|++.|.. |..+++. |+... .+++++..+..+||++||+|+.++++++++|+++. |
T Consensus 338 iE~h~aft~~----~l~~~~~-lG~~~--~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~-~-------------- 395 (442)
T 2wu9_A 338 FEINEAFASQ----FVYCRNK-LGLDP--EKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG-K-------------- 395 (442)
T ss_dssp EEECCSBHHH----HHHHHHH-HTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC-T--------------
T ss_pred EEEeCCChHH----HHHHHHH-hCCCC--CCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC-C--------------
Confidence 9999998874 7777754 44321 23445555558999999999999999999999864 0
Q ss_pred CCCccccCCCCCCcEEEE-eccccccceeeeEeeecC
Q 014349 391 NFMPLTASKDMPISAALS-NSFGFGGTNASLLFTKCQ 426 (426)
Q Consensus 391 ~~~~~~~~~~~~~~~~l~-~~~g~gG~~~~~vl~~~~ 426 (426)
+.+++|+ +++| ||.|+++||++++
T Consensus 396 -----------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 -----------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp -----------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred -----------CCCEEEEEeecc-cchheEEEEEecc
Confidence 2468885 5678 9999999999863
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=285.64 Aligned_cols=272 Identities=19% Similarity=0.267 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+..+|+++++++||+|||+++.+++ ++++|+..+.. ....++.+++..+
T Consensus 26 ~~~~L~~~a~~~Al~dAgl~~~~id-----~~~~g~~~~~~--------------------------~~~~~a~~ia~~l 74 (392)
T 2vu1_A 26 PAHELGATVISAVLERAGVAAGEVN-----EVILGQVLPAG--------------------------EGQNPARQAAMKA 74 (392)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------CCcHHHHHHHHHc
Confidence 3578999999999999999988776 78888754321 0135678999999
Q ss_pred CCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH----H-------HHHh-------------
Q 014349 161 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS----M-------AGFC------------- 213 (426)
Q Consensus 161 gl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~-~~~----~-------~~~~------------- 213 (426)
|++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.. . ..+.
T Consensus 75 gl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T 2vu1_A 75 GVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYG 154 (392)
T ss_dssp TCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTC
T ss_pred CCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhccccccccc
Confidence 998 899999999999999999999999999999999999998654 210 0 0000
Q ss_pred -hhhhcc----------c---------------------ccCCC--CC-----CCCcccccC------------------
Q 014349 214 -KSRALT----------T---------------------KYNGT--PQ-----EASRPFDCG------------------ 236 (426)
Q Consensus 214 -~~~~l~----------~---------------------~~~~~--~~-----~~~~pf~~~------------------ 236 (426)
.++.++ . ....+ |. ..|+|||.+
T Consensus 155 ~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v 234 (392)
T 2vu1_A 155 YHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPA 234 (392)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCc
Confidence 011110 0 00000 10 126789887
Q ss_pred --CCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 014349 237 --RDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 307 (426)
Q Consensus 237 --~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 307 (426)
++|++ ++|||+++||++++.|+++|.+++++|.|++..++ .|.+.+.+...+++++|+++|++|+|
T Consensus 235 ~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 309 (392)
T 2vu1_A 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGD 309 (392)
T ss_dssp SCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHHH
Confidence 78999 99999999999999999999999999999998873 34444556789999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHH--HHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Q 014349 308 VDYVNAHATSTPLGDTVEATA--IRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPD 385 (426)
Q Consensus 308 Id~v~~hgtgt~~~D~~E~~a--~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~ 385 (426)
|||||+| |..|..+ +.+.|+... .++++++.|.++||+++|+|+.++++++++|+++
T Consensus 310 Id~ie~~-------d~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------ 368 (392)
T 2vu1_A 310 LDLVEAN-------EAFAAQACAVNKDLGWDP--SIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR------------ 368 (392)
T ss_dssp CSEEEEC-------CSBHHHHHHHHHHHCCCG--GGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH------------
T ss_pred cCEEEec-------cccHHHHHHHHHHcCCCc--ccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc------------
Confidence 9999999 5556655 356665432 3688899999999999999999999999999884
Q ss_pred CCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 386 PIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..+++++++..-||.+.++||++.
T Consensus 369 ----------------~~~~gl~~~~~ggG~~~a~~~e~~ 392 (392)
T 2vu1_A 369 ----------------GARKGLATLCIGGGMGVAMCIESL 392 (392)
T ss_dssp ----------------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ----------------CCCEEEEEEecccchheEEEEEeC
Confidence 135788766555899999999873
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-34 Score=278.22 Aligned_cols=272 Identities=20% Similarity=0.245 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...+|+++|+++||+|||+++.+++ +|++|+..+.. .....+..++..+
T Consensus 54 ~~~~L~~~Aa~~AL~dAgl~~~~id-----~v~~g~~~~~~--------------------------~~~~~a~~~a~~l 102 (418)
T 2iik_A 54 TPDELLSAVMTAVLKDVNLRPEQLG-----DICVGNVLQPG--------------------------AGAIMARIAQFLS 102 (418)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----CEEEECSSSBG--------------------------GGHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCcc--------------------------ccccHHHHHHHHc
Confidence 3578999999999999999988886 79998754321 1134566788899
Q ss_pred CC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH------------------------HHHHHhh
Q 014349 161 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL------------------------SMAGFCK 214 (426)
Q Consensus 161 gl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~------------------------~~~~~~~ 214 (426)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++... .+.....
T Consensus 103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 182 (418)
T 2iik_A 103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENV 182 (418)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHH
T ss_pred CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHH
Confidence 99 789999999999999999999999999999999999999876521 0100000
Q ss_pred ---------------------------hhhccccc-----------------CCCCCCCCcc-------------cccCC
Q 014349 215 ---------------------------SRALTTKY-----------------NGTPQEASRP-------------FDCGR 237 (426)
Q Consensus 215 ---------------------------~~~l~~~~-----------------~~~~~~~~~p-------------f~~~~ 237 (426)
.+.+.... ..++++.||| |+.++
T Consensus 183 a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~ 262 (418)
T 2iik_A 183 AERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDG 262 (418)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCC
Confidence 01111000 0123567888 99775
Q ss_pred -----CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 014349 238 -----DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 312 (426)
Q Consensus 238 -----~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~ 312 (426)
+++.++|||+++||++++.|+++|.+|+++|.|++.... .|+..+.+...+++++|+++|++|+||||+|
T Consensus 263 ~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE 337 (418)
T 2iik_A 263 STTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFE 337 (418)
T ss_dssp CCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeee
Confidence 999999999999999999999999999999999988763 4444456678899999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhhcccCCCcceeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCC
Q 014349 313 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFND 390 (426)
Q Consensus 313 ~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~ 390 (426)
+|++ +..+|..|..++. .. +.+++..++ ++||+.||+|+.++++++++|+++-
T Consensus 338 ~h~a-f~~~~~~~~~~lg----~~----~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~---------------- 392 (418)
T 2iik_A 338 INEA-FASQAAYCVEKLR----LP----PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRG---------------- 392 (418)
T ss_dssp ECCS-BHHHHHHHHHHHT----CC----GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHT----------------
T ss_pred eecc-chHHHHHHHHHcC----CC----ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcC----------------
Confidence 9964 4456666655542 11 357888885 7999999999999999999998732
Q ss_pred CCCccccCCCCCCc-EEEEeccccccceeeeEeeec
Q 014349 391 NFMPLTASKDMPIS-AALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 391 ~~~~~~~~~~~~~~-~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+ +++++..+.||...++||+++
T Consensus 393 ------------~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 393 ------------KRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp ------------SCEEEEEEEEETTTEEEEEEEEEC
T ss_pred ------------CCeeeEEEEeeccchhheEEEecc
Confidence 23 788888888999999999986
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=276.18 Aligned_cols=269 Identities=19% Similarity=0.266 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+..+|+++++++||+|||+++.+++ ++++|+..+.. .....+.+++..+
T Consensus 31 ~~~~l~~~a~~~Al~dAgl~~~~id-----~~~~g~~~~~~--------------------------~~~~~a~~va~~l 79 (395)
T 2ib8_A 31 PATKLGSIAIQGAIEKAGIPKEEVK-----EAYMGNVLQGG--------------------------EGQAPTRQAVLGA 79 (395)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CCchHHHHHHHHc
Confidence 3568999999999999999888776 78888744221 1234678999999
Q ss_pred CC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-------------------HHH--------
Q 014349 161 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-------------------MAG-------- 211 (426)
Q Consensus 161 gl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~-------------------~~~-------- 211 (426)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.... +..
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (395)
T 2ib8_A 80 GLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKI 159 (395)
T ss_dssp TCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTE
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccc
Confidence 99 7999999999999999999999999999999999999997543111 100
Q ss_pred ---------Hhhhhhcccc---------------------cC-----------------CCCCCCCcc--ccc-------
Q 014349 212 ---------FCKSRALTTK---------------------YN-----------------GTPQEASRP--FDC------- 235 (426)
Q Consensus 212 ---------~~~~~~l~~~---------------------~~-----------------~~~~~~~~p--f~~------- 235 (426)
....+ ++.. +. .+.++.+++ |+.
T Consensus 160 ~m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 160 HMGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238 (395)
T ss_dssp EHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCT
T ss_pred hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcc
Confidence 01111 0000 00 001122222 554
Q ss_pred --CCCcce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 014349 236 --GRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306 (426)
Q Consensus 236 --~~~G~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 306 (426)
+++|++ ++|||+++||++++.|+++|.+|+++|.|++... +.|...+.+...+++++|+++|++|+
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~ 313 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKE 313 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHH
Confidence 568999 9999999999999999999999999999999765 34444455678999999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHH--hhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCC
Q 014349 307 QVDYVNAHATSTPLGDTVEATAIRTV--FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 384 (426)
Q Consensus 307 dId~v~~hgtgt~~~D~~E~~a~~~~--~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~ 384 (426)
||||||+| |..|..++..+ |+... .++++++.|.++||+.||+|+.++++++++|+++
T Consensus 314 dId~ie~~-------D~f~~~~l~~~e~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~----------- 373 (395)
T 2ib8_A 314 DIAMWEVN-------EAFSLVVLANIKMLEIDP--QKVNINGGAVSLGHPIGMSGARIVGHLTHALKQG----------- 373 (395)
T ss_dssp GEEEEEEC-------CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCTT-----------
T ss_pred HcCEEEEc-------cccHHHHHHHHHHcCCCc--cccCCCcchhhcCCChhHHHHHHHHHHHHHHhhC-----------
Confidence 99999988 77788888777 65432 3678889999999999999999999999999752
Q ss_pred CCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 385 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++.++....-||...+++|++.
T Consensus 374 -------------------~~gl~~~~~ggG~g~a~~~~~~ 395 (395)
T 2ib8_A 374 -------------------EYGLASICNGGGGASAMLIQKL 395 (395)
T ss_dssp -------------------CEEEEEEEETTTEEEEEEEEEC
T ss_pred -------------------CceEEEEecccCHhheEEEEcC
Confidence 2344544444667778888863
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=272.42 Aligned_cols=270 Identities=18% Similarity=0.203 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHcC----CCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH
Q 014349 82 FIAYALCAADEALHDAK----WLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAG----l~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 157 (426)
..+|+++|+++||+||| +++.+++ +|++|+..+.. ..+..+.+++
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id-----~v~~g~~~~~~--------------------------~~~~~a~~va 83 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE-----EVACGNVLNVG--------------------------AGATEHRAAC 83 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC-----CEEEECSSSBG--------------------------GGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCC-----EEEEEecCCCC--------------------------CCChHHHHHH
Confidence 46899999999999999 9888876 79998754321 2356788999
Q ss_pred HHcCC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH------------HH--HH-----hhhh
Q 014349 158 MKYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS------------MA--GF-----CKSR 216 (426)
Q Consensus 158 ~~lgl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~------------~~--~~-----~~~~ 216 (426)
..+|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.... +. ++ ..++
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMG 163 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHH
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHH
Confidence 99999 7899999999999999999999999999999999999997543111 00 00 0011
Q ss_pred hccc----ccC----------------------------------------CCCCC------------CCcc-cccCCCc
Q 014349 217 ALTT----KYN----------------------------------------GTPQE------------ASRP-FDCGRDG 239 (426)
Q Consensus 217 ~l~~----~~~----------------------------------------~~~~~------------~~~p-f~~~~~G 239 (426)
.+++ +++ .++++ .++| |+.++ |
T Consensus 164 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G 242 (393)
T 1afw_A 164 ITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-G 242 (393)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----C
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-C
Confidence 1100 000 01222 2456 87554 7
Q ss_pred ce-------eccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 014349 240 FV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 312 (426)
Q Consensus 240 ~~-------~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~ 312 (426)
++ ++|||+++||++++.|+++|.+|+++|.|++.+++ .|+..+.+...+++++|+++|++|+||||||
T Consensus 243 ~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~ve 317 (393)
T 1afw_A 243 TTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGV-----PPEIMGVGPAYAIPKVLEATGLQVQDIDIFE 317 (393)
T ss_dssp CCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred CeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEecc-----ChhhcchhHHHHHHHHHHHcCCCHHHCCEEE
Confidence 76 79999999999999999999999999999999886 2344455678999999999999999999999
Q ss_pred ecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCC
Q 014349 313 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNF 392 (426)
Q Consensus 313 ~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~ 392 (426)
+|++.|.. |..+++. |+... .+++++..+..+||++||+|+.++++++++|+++-
T Consensus 318 ~h~~ft~~----~l~~~~~-lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~------------------ 372 (393)
T 1afw_A 318 INEAFAAQ----ALYCIHK-LGIDL--NKVNPRGGAIALGHPLGCTGARQVATILRELKKDQ------------------ 372 (393)
T ss_dssp ECCSBHHH----HHHHHHH-HTCCG--GGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTC------------------
T ss_pred EeccCHHH----HHHHHHH-hCCCC--cCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcC------------------
Confidence 99888853 6666654 44321 24555555558999999999999999999998742
Q ss_pred CccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 393 MPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 393 ~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
. .++...+-||...++||+++
T Consensus 373 ---~---------gl~~~c~ggg~g~a~~~~~~ 393 (393)
T 1afw_A 373 ---I---------GVVSMCIGTGMGAAAIFIKE 393 (393)
T ss_dssp ---E---------EEEEEEETTTEEEEEEEEEC
T ss_pred ---C---------cEEEEeecccceEEEEEEeC
Confidence 1 45555555777888998873
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=267.64 Aligned_cols=272 Identities=22% Similarity=0.352 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ +|++|+..+. ......+.+++..+|
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId-----~vi~g~~~~~--------------------------~~~~~~a~~v~~~lG 79 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID-----ESLLGGVLTA--------------------------GLGQNIARQIALGAG 79 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSCCT--------------------------TSCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCC--------------------------CCCchHHHHHHHHcC
Confidence 568999999999999999999988 8999875422 112346778999999
Q ss_pred C--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH-----------------------------
Q 014349 162 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA----------------------------- 210 (426)
Q Consensus 162 l--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~----------------------------- 210 (426)
+ ++|+++|+++|+|++.||..|+++|++|++|.+||+|+|.++......
T Consensus 80 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (396)
T 4dd5_A 80 IPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNN 159 (396)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTT
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 479999999999999999999999999999999999999876521100
Q ss_pred ---H----------------------Hhhh--------hhccccc------------CCCCCCCCcc-------------
Q 014349 211 ---G----------------------FCKS--------RALTTKY------------NGTPQEASRP------------- 232 (426)
Q Consensus 211 ---~----------------------~~~~--------~~l~~~~------------~~~~~~~~~p------------- 232 (426)
+ .+.. +.+.... ..+++..+|+
T Consensus 160 ~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v 239 (396)
T 4dd5_A 160 YHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPA 239 (396)
T ss_dssp EEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCc
Confidence 0 0000 0000000 0012333332
Q ss_pred cc-----cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 014349 233 FD-----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 307 (426)
Q Consensus 233 f~-----~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 307 (426)
|+ ...++..++||++++||++++.|++++.+++++|.|++.+++ .|.+.+.+...+++++|+++|++|+|
T Consensus 240 ~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~d 314 (396)
T 4dd5_A 240 FKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTIED 314 (396)
T ss_dssp SSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCHHH
Confidence 33 234566789999999999999999999999999999998874 45555556789999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC
Q 014349 308 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 387 (426)
Q Consensus 308 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~ 387 (426)
|||||+|.+. .+|..++.+.|+... .++++++.|.++||+.+|+|+.++++++++|+++
T Consensus 315 Id~ve~~d~f-----~~~~~~~~~~lg~~~--~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-------------- 373 (396)
T 4dd5_A 315 IDLVEANEAF-----AAQSVAVIRDLNIDM--NKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR-------------- 373 (396)
T ss_dssp CSEEEECCSB-----HHHHHHHHHHHTCCT--TSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------
T ss_pred cCEEEecChH-----HHHHHHHHHHhCCCC--CccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999999542 357777888887543 4688999999999999999999999999999984
Q ss_pred CCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 388 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
..++++++..+.||...++||++
T Consensus 374 --------------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 --------------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp --------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCeEEEEEcccCCceeEEEEeC
Confidence 24689999999999999999985
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-33 Score=269.84 Aligned_cols=274 Identities=21% Similarity=0.292 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+...|+++|+++||+|+|+++++++ ++++|+..... .....+.+++..+
T Consensus 28 ~~~~L~~~A~~~Al~~agl~~~~Id-----~v~~g~~~~~~--------------------------~~~~~a~~i~~~l 76 (394)
T 3ss6_A 28 TPVELAVPVLQEAVKRGGVEPHEVD-----EVILGHCIQRT--------------------------DEANTARTAALAA 76 (394)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSSCCG--------------------------GGCSHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHhHCC-----EEEEEEccCCC--------------------------ccchHHHHHHHHc
Confidence 3568999999999999999999988 89998754221 1234567899999
Q ss_pred CC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH-----------------------------
Q 014349 161 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM----------------------------- 209 (426)
Q Consensus 161 gl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~----------------------------- 209 (426)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.....
T Consensus 77 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T 3ss6_A 77 GFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH 156 (394)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTC
T ss_pred CCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccccccc
Confidence 99 47999999999999999999999999999999999999986642110
Q ss_pred --HHH----------------------hhhh--------hcccc------------cCCCCCCCCcc-------------
Q 014349 210 --AGF----------------------CKSR--------ALTTK------------YNGTPQEASRP------------- 232 (426)
Q Consensus 210 --~~~----------------------~~~~--------~l~~~------------~~~~~~~~~~p------------- 232 (426)
.+. +... .+... ...+|++.+|+
T Consensus 157 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pv 236 (394)
T 3ss6_A 157 IMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPA 236 (394)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCc
Confidence 000 0000 00000 00124445553
Q ss_pred ccc-----CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 014349 233 FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQ 307 (426)
Q Consensus 233 f~~-----~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 307 (426)
|+. ..++..++||++++||++++.|++++.+++++|.|++.++. .|...+.+...+++++|+++|++|+|
T Consensus 237 f~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 311 (394)
T 3ss6_A 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLED 311 (394)
T ss_dssp SSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHH
Confidence 542 25677789999999999999999999999999999998763 45444556789999999999999999
Q ss_pred ccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC
Q 014349 308 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPI 387 (426)
Q Consensus 308 Id~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~ 387 (426)
|||+|+|.. ...|..++.+.|+... .++++++.|.++||+.+|+|+.++++++++|+++
T Consensus 312 Id~ve~~d~-----fa~~~~~~~~~lg~~~--~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-------------- 370 (394)
T 3ss6_A 312 ADLLEINEA-----FAAQYLAVEKELDLDR--EKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR-------------- 370 (394)
T ss_dssp CSEEEECCS-----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------
T ss_pred cCEEEeCCc-----hHHHHHHHHHHhCCCC--CCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 999999943 2368888888887543 3688899999999999999999999999999873
Q ss_pred CCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 388 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..++.+++..+-||...++||+++
T Consensus 371 --------------~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 371 --------------GLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp --------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred --------------CCCEEEEEEccCcCceeEEEEEcC
Confidence 246888888889999999999874
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=265.44 Aligned_cols=278 Identities=19% Similarity=0.228 Sum_probs=205.9
Q ss_pred CHHHHHHHHHHHHHHHHc-CCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dA-Gl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
.+..+|+++|+++||+|| |+++++++ +|++|+..+.. . .....+.+++.
T Consensus 25 ~~~~~L~~~a~~~Al~~a~gi~~~~Id-----~v~~g~~~~~~----------------------~---~~~~~a~~~~~ 74 (387)
T 3goa_A 25 VRAEDLSAHLMRSLLARNPSLTAATLD-----DIYWGCVQQTL----------------------E---QGFNIARNAAL 74 (387)
T ss_dssp SCHHHHHHHHHHHHHHHCTTSCGGGCC-----EEEEECSCCSB----------------------T---TTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCCCHHHcC-----EEEEEcccCCc----------------------c---cccHHHHHHHH
Confidence 356789999999999999 99999988 89999754221 0 01345678999
Q ss_pred HcCC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH---------------------------
Q 014349 159 KYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------------------------- 209 (426)
Q Consensus 159 ~lgl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~--------------------------- 209 (426)
.+|+ ..|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.....
T Consensus 75 ~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 154 (387)
T 3goa_A 75 LAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEML 154 (387)
T ss_dssp HTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHH
T ss_pred HcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHH
Confidence 9999 57999999999999999999999999999999999999987653210
Q ss_pred -----------HHHh---hhh--------hccccc-------------CCCCCCCCcc-------------ccc------
Q 014349 210 -----------AGFC---KSR--------ALTTKY-------------NGTPQEASRP-------------FDC------ 235 (426)
Q Consensus 210 -----------~~~~---~~~--------~l~~~~-------------~~~~~~~~~p-------------f~~------ 235 (426)
..+. ..+ .+.... ..++++.+|| |+.
T Consensus 155 ~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t 234 (387)
T 3goa_A 155 SRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVT 234 (387)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCcee
Confidence 0000 000 110000 0012333333 543
Q ss_pred CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 014349 236 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHA 315 (426)
Q Consensus 236 ~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hg 315 (426)
..++..++||++++||++++.|+++|.+++++|.|++.+++.. ...+.+...+++++|+++|++|+||||||+|.
T Consensus 235 ~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~ve~h~ 309 (387)
T 3goa_A 235 AGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDP-----SIMGYGPVPASKLALKKAGLSASDIDVFEMNE 309 (387)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCT-----TSTTCTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred cccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCC-----CcchHHHHHHHHHHHHHcCCCHHHcCEEEEeC
Confidence 2466679999999999999999999999999999999988643 33333458899999999999999999999997
Q ss_pred CCCCCCCHHHHHHHHHHhhccc-CCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCc
Q 014349 316 TSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMP 394 (426)
Q Consensus 316 tgt~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~ 394 (426)
+.+.. +...++ .++.-. ...+++++..+..+||++||+|+.++++++++|+++
T Consensus 310 ~f~~~----~~~~~~-~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------------- 363 (387)
T 3goa_A 310 AFAAQ----ILPCIK-DLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK--------------------- 363 (387)
T ss_dssp SBHHH----HHHHHH-HTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------------
T ss_pred cchHH----HHHHHH-HhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc---------------------
Confidence 66542 333333 333200 002455666667899999999999999999999972
Q ss_pred cccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 395 LTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 395 ~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..+++++....-||...++||+++
T Consensus 364 -------~~~~gl~~~c~ggG~g~a~~~e~~ 387 (387)
T 3goa_A 364 -------DAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_dssp -------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred -------CCCEEEEEeccCcCceEEEEEEeC
Confidence 246788877777889999999874
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-32 Score=263.62 Aligned_cols=272 Identities=23% Similarity=0.368 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+|||+++++++ ++++|+.... ......+.+++..+|
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id-----~v~~g~~~~~--------------------------~~~~~~a~~~~~~lG 77 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID-----EVIIGNVLQT--------------------------GLGQNVARQIAINAG 77 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECCCCS--------------------------STTCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC--------------------------CCcchHHHHHHHHcC
Confidence 568999999999999999999988 8999875321 011245778999999
Q ss_pred C--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH-----------------------------
Q 014349 162 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA----------------------------- 210 (426)
Q Consensus 162 l--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~----------------------------- 210 (426)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.++......
T Consensus 78 l~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (395)
T 4e1l_A 78 IPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQ 157 (395)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTH
T ss_pred CCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhccccccccccc
Confidence 9 579999999999999999999999999999999999999877643210
Q ss_pred ---HHh----------------------hhh--------hcccc---------c----CCCCCCCCcc------------
Q 014349 211 ---GFC----------------------KSR--------ALTTK---------Y----NGTPQEASRP------------ 232 (426)
Q Consensus 211 ---~~~----------------------~~~--------~l~~~---------~----~~~~~~~~~p------------ 232 (426)
+.. ... .+... . ..++++.+|+
T Consensus 158 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~ 237 (395)
T 4e1l_A 158 YHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKP 237 (395)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCB
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCC
Confidence 000 000 00000 0 0123333332
Q ss_pred -cc-----cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 014349 233 -FD-----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSH 306 (426)
Q Consensus 233 -f~-----~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~ 306 (426)
|+ ...++..++||++++||++++.|++++.+++++|.|++.+++ .|.+.+.+...+++++|+++|++|+
T Consensus 238 v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~al~~agl~~~ 312 (395)
T 4e1l_A 238 AFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGV-----EPEVMGTGPIPATRKALKKAGLSIN 312 (395)
T ss_dssp SSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGTTCTHHHHHHHHHHHTTCCGG
T ss_pred ccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccC-----CCCcchHHHHHHHHHHHHHcCCCHH
Confidence 33 124566789999999999999999999999999999998874 3443344568899999999999999
Q ss_pred CccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Q 014349 307 QVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDP 386 (426)
Q Consensus 307 dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~ 386 (426)
||||||+|.. ...|..++.+.|+... .++++++.|.++||+.+|+|+.++++++++|+++
T Consensus 313 dId~ve~~d~-----fa~~~~~~~~~lg~~~--~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~------------- 372 (395)
T 4e1l_A 313 DIDLIEANEA-----FAAQALAVKNELQIDS--SKLNVNGGAIALGHPIGASGARILVTLIYEMQKR------------- 372 (395)
T ss_dssp GCSEEEECCS-----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH-------------
T ss_pred HcCEEEecCh-----hHHHHHHHHHHhCCCC--CCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc-------------
Confidence 9999999932 2267778888887543 3688899999999999999999999999999984
Q ss_pred CCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 387 IFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
..++.++...+-||...++||++
T Consensus 373 ---------------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 ---------------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp ---------------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred ---------------CCCEEEEEEccCCCceEEEEEeC
Confidence 14688888888899999999985
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=258.21 Aligned_cols=275 Identities=19% Similarity=0.174 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHHHH-cCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~d-AGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
+..+|+.+|+++||+| ||+++++++ +|++|+..... .....++.+++..
T Consensus 31 ~~~~L~~~A~~~AL~~~AGl~~~dId-----~vi~g~~~~~~-------------------------~~~~~~a~~va~~ 80 (407)
T 3svk_A 31 KPLNLVVGLVDELRRRYPDLDETLIS-----DMILGVVSPVG-------------------------DQGGDIARTAVLA 80 (407)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCGGGEE-----EEEEECC---------------------------------CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhcCcCHHHCC-----EEEEEecCccc-------------------------cccCcHHHHHHHH
Confidence 3578999999999999 999998887 89998743110 0013457789999
Q ss_pred cCC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH--------------------HHHHh----
Q 014349 160 YGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--------------------MAGFC---- 213 (426)
Q Consensus 160 lgl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~--------------------~~~~~---- 213 (426)
+|+ +.|+++|+++|+|++.||..|+++|++|++|++||+|+|.++.... ..++.
T Consensus 81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHH
T ss_pred cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHH
Confidence 999 5799999999999999999999999999999999999998765211 00000
Q ss_pred ------------hh--------------hhccc-------cc---CCCCCCCCcc-------------ccc---------
Q 014349 214 ------------KS--------------RALTT-------KY---NGTPQEASRP-------------FDC--------- 235 (426)
Q Consensus 214 ------------~~--------------~~l~~-------~~---~~~~~~~~~p-------------f~~--------- 235 (426)
.. +.+.. .. ..+|+..+|+ |+.
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~ 240 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDD 240 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC----------
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccc
Confidence 00 00000 00 0123444443 432
Q ss_pred -----------------CCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHH
Q 014349 236 -----------------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRAL 298 (426)
Q Consensus 236 -----------------~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al 298 (426)
..+...++||++++||++++.|+++|.+++++|.|++.+.+.. .....+...+++++|
T Consensus 241 ~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al 315 (407)
T 3svk_A 241 VALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDP-----VIMLTGPTPATRKVL 315 (407)
T ss_dssp ---CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHH
T ss_pred cccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCC-----ccccHHHHHHHHHHH
Confidence 2355569999999999999999999999999999999977532 222334578999999
Q ss_pred HHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCC
Q 014349 299 KQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLT 378 (426)
Q Consensus 299 ~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~ 378 (426)
+++|++|+||||+|+|.+.+.. |...+ +.++... .+++++..+..+||+.||+|+.++++++++|+++
T Consensus 316 ~~Agl~~~dId~~e~hdaf~~~----~l~~~-~~lg~~~--~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~----- 383 (407)
T 3svk_A 316 DRAGLTIDDIDLFELNEAFASV----VLKFQ-KDLNIPD--EKLNVNGGAIAMGHPLGATGAMITGTMVDELERR----- 383 (407)
T ss_dssp HHHTCCGGGCSEEEECCSBHHH----HHHHH-HHHTCCG--GGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH-----
T ss_pred HHcCCCHHHCCEEEEeChhHHH----HHHHH-HHhCCCC--CCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc-----
Confidence 9999999999999999655442 33333 3344321 2566667777899999999999999999999873
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 379 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..+++++...+.||...++||++.
T Consensus 384 -----------------------~~~~gl~~~c~ggG~g~a~~~e~~ 407 (407)
T 3svk_A 384 -----------------------NARRALITLCIGGGMGVATIIERV 407 (407)
T ss_dssp -----------------------TCCEEEEEEECSSSCEEEEEEEEC
T ss_pred -----------------------CCCEEEEEeeccCcceEEEEEEcC
Confidence 246889999999999999999974
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=249.41 Aligned_cols=250 Identities=17% Similarity=0.163 Sum_probs=187.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
++..+|+++|+++||++||+++++++ +|++|++.+. ...+..+.+++..
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~~~id-----~vi~~~~~~~--------------------------~~~~~~a~~v~~~ 96 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGALEGVD-----AVIVATNTPD--------------------------ALFPDTAALVQAR 96 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTTTTEE-----EEEEECSSCS--------------------------EEESCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCCcHHHHHHHH
Confidence 46789999999999999999877665 7888875321 1112367899999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
+|+++|+++++++|+|++.||..|+++|++|++|.+||+|+|.+. +. ..|+| ++++
T Consensus 97 lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------------------~~~~d-~~~~ 152 (322)
T 1ub7_A 97 FGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALS-KI----------------------IDWND-RATA 152 (322)
T ss_dssp TTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GT----------------------SCTTC-HHHH
T ss_pred hCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhc-cc----------------------cChhh-cccc
Confidence 999999999999999999999999999999999999999999732 21 11333 4568
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEE-eEEEecCCCCCC-----CCCC---------Ch--------HHHHHHHHH
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVR-GYGMSGDAHHIT-----QPHI---------DG--------KGAILAMTR 296 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~-g~~~~~d~~~~~-----~~~~---------~~--------~~~~~a~~~ 296 (426)
+++||||+++||++.+. +.++++.+. +.+...+..+.. .|.. ++ ..+.+++++
T Consensus 153 ~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 228 (322)
T 1ub7_A 153 VLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLE 228 (322)
T ss_dssp TTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHH
Confidence 99999999999998653 334554432 222111111111 0221 22 467789999
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcC
Q 014349 297 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 376 (426)
Q Consensus 297 al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~p 376 (426)
+|+++|++++|||||++|+++++..|. +.+.|+... .+ +.+.|..+||+.+|++++.+.++ ++++.+
T Consensus 229 al~~agl~~~did~~~~H~~~~~~~d~-----~~~~lg~~~--~~--~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~- 295 (322)
T 1ub7_A 229 AIEKAGLTPEDIRLFVPHQANLRIIDA-----ARERLGLPW--ER--VAVNVDRYGNTSTASIPLALKEA---VDAGRI- 295 (322)
T ss_dssp HHHHHTCCGGGCSEEEECCSCHHHHHH-----HHHTTTCCG--GG--BCCCHHHHCBCGGGHHHHHHHHH---HHHTSS-
T ss_pred HHHHcCCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCH--HH--HHHHHHhhCcHHHHHHHHHHHHH---HHhCCC-
Confidence 999999999999999999999987663 566666432 12 34678999999999999977654 566653
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 377 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 377 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+.+.+++++||+|++++++||+.+
T Consensus 296 ------------------------~~g~~~l~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 296 ------------------------REGDHVLLVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp ------------------------CTTCEEEEEEEETTTEEEEEEEECC
T ss_pred ------------------------CCCCEEEEEEEChhheeEEEEEEeC
Confidence 1246899999999999999999864
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=236.78 Aligned_cols=244 Identities=17% Similarity=0.198 Sum_probs=185.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
++..+|+++|+++||+++|+++++++ +|++++..+.. ..+..+.+++..
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id-----~v~~~~~~~~~--------------------------~~~~~a~~v~~~ 96 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELD-----LIILATLTPQK--------------------------RFPSTACLVQAQ 96 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSCSS--------------------------SSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCCcHHHHHHHH
Confidence 56789999999999999999988876 89998854321 112367899999
Q ss_pred cCCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 160 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 160 lgl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
||+++ |+++++++|+|++.||..|+++|++|++|.+||+|+|.+... + . |+.+.+
T Consensus 97 lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~------------~-~~~~~~ 152 (309)
T 2ebd_A 97 LKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEA-----------V------------D-WEDRST 152 (309)
T ss_dssp HTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGT-----------C------------C-TTCTTT
T ss_pred hCCCCceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEecccccc-----------c------------C-ccchhh
Confidence 99998 999999999999999999999999999999999999974210 0 1 233567
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQP-----HIDGK--------GAILAMTRALKQSG 302 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~~-----~~~~~--------~~~~a~~~al~~ag 302 (426)
++++||||+++||++.+.+ ..+++ ....+++. +...| ..++. .+.++++++|+++|
T Consensus 153 ~~~~gdGaaA~vL~~~~~~----~~i~~----~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ag 224 (309)
T 2ebd_A 153 CVLFGDGAGAVVVTRSEDK----SDILA----TRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAG 224 (309)
T ss_dssp TTTBCEEEEEEEEEECSSS----CEEEE----EEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccEEEEEEecCCC----CceeE----EEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999987643 23433 33334442 22223 22333 56789999999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCC
Q 014349 303 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 382 (426)
Q Consensus 303 l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~ 382 (426)
++|+||||+++|+++++..| ++.+.++... .++ .+.|..+||+.+|++++.|.+++ +++.+
T Consensus 225 l~~~did~~~~H~~~~~~~~-----~~~~~lg~~~--~~~--~~~~~~~Gh~~~As~~~~L~~~~---~~g~~------- 285 (309)
T 2ebd_A 225 VKPEEVSLVIPHQANVRIIN-----ALAEKLNIPK--EKV--FVNIQKYGNTSAASIPIALHEAI---KEGKV------- 285 (309)
T ss_dssp CCGGGCSEEEECCSCHHHHH-----HHHHHTTCCG--GGB--CCCHHHHCBCGGGHHHHHHHHHH---HTTCC-------
T ss_pred CCHHHCCEEEEcCCCHHHHH-----HHHHHhCCCH--HHh--hhhHhhhcchHHHHHHHHHHHHH---HcCCC-------
Confidence 99999999999999988654 4566676432 123 35688999999999999988764 33321
Q ss_pred CCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 383 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++..+||.|.+..+++|+
T Consensus 286 ------------------~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 286 ------------------KRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------------CCCCEEEEEEEchhhhhEEEEEE
Confidence 12457888999999999999986
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=234.81 Aligned_cols=248 Identities=17% Similarity=0.165 Sum_probs=185.0
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
.++..+|+++|+++||+++|+++++++ +|++|++.+. ...+..+.+++.
T Consensus 48 ~~~~~~l~~~a~~~al~~ag~~~~~id-----~vi~g~~~~~--------------------------~~~~~~a~~v~~ 96 (317)
T 1hnj_A 48 NETVSTMGFEAATRAIEMAGIEKDQIG-----LIVVATTSAT--------------------------HAFPSAACQIQS 96 (317)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCS--------------------------CSSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCCcHHHHHHH
Confidence 456789999999999999999888776 8898875421 111246789999
Q ss_pred HcCCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 159 KYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 159 ~lgl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
.||++ +|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+... +. |+.+.
T Consensus 97 ~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~~-------------~~d~~ 152 (317)
T 1hnj_A 97 MLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLART-----------CD-------------PTDRG 152 (317)
T ss_dssp HHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHH-----------SC-------------TTCHH
T ss_pred HhCCCCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhccc-----------CC-------------chhcc
Confidence 99998 8999999999999999999999999999999999999973211 00 12233
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeE-EEecCCCCCCCC-----------CCChH--------HHHHHHHHH
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGY-GMSGDAHHITQP-----------HIDGK--------GAILAMTRA 297 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~-~~~~d~~~~~~~-----------~~~~~--------~~~~a~~~a 297 (426)
+|+++||||+++||++.+. ..+++.+.+. +...+..+...+ ..++. .+.++++++
T Consensus 153 ~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~a 227 (317)
T 1hnj_A 153 TIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDET 227 (317)
T ss_dssp HHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHH
Confidence 4899999999999998653 2466665442 111121122111 12343 567899999
Q ss_pred HHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCC
Q 014349 298 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 377 (426)
Q Consensus 298 l~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp 377 (426)
|+++|++++|||||++|++|++..| ++.+.|+... -.+.+.|+.+||+.+|+..+.|..+ ++.+.+
T Consensus 228 L~~agl~~~did~v~~H~~~~~~~d-----~i~~~lg~~~----~~~~~~~~~~Gn~~~As~~~~L~~~---~~~~~~-- 293 (317)
T 1hnj_A 228 LAANNLDRSQLDWLVPHQANLRIIS-----ATAKKLGMSM----DNVVVTLDRHGNTSAASVPCALDEA---VRDGRI-- 293 (317)
T ss_dssp HHHTTCCGGGCCEEEECCSCHHHHH-----HHHHHTTCCG----GGBCCCHHHHCBCGGGHHHHHHHHH---HHTTCS--
T ss_pred HHHcCCCHHHCCEEEEcCCCHHHHH-----HHHHHcCCCH----HHhHhhHhhhCcHHHHHHHHHHHHH---HHhCCC--
Confidence 9999999999999999999999766 4566676432 1245789999999999999887655 344432
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 378 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++..+||.|.+..+++|+
T Consensus 294 -----------------------~~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 294 -----------------------KPGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp -----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -----------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 12357788899999888888886
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-28 Score=229.88 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=182.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
.+..+|+++|+++||+++|+++.+++ +|+++++.+.. .. ...+.+++..
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id-----~vi~~~~~~~~---------------------~~-----~~~a~~v~~~ 97 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID-----MIIVATATGDM---------------------PF-----PTVANMLQER 97 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC---------------------SS-----SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------CC-----CcHHHHHHHH
Confidence 45789999999999999999888776 89998854321 11 1357899999
Q ss_pred cCCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 160 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 160 lgl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
+|++ +|++++.++|+|++.||..|+++|++|++|.+||+|+|.+... .+|++. .+
T Consensus 98 lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------------~~~~d~-~~ 153 (313)
T 1zow_A 98 LGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI-----------------------TDLTDR-ST 153 (313)
T ss_dssp HTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-----------------------CCTTCH-HH
T ss_pred hCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc-----------------------cCcccc-cc
Confidence 9998 5999999999999999999999999999999999999974221 123432 36
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC-----CCCCC----CCCh--------HHHHHHHHHHHHHc
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH-----HITQP----HIDG--------KGAILAMTRALKQS 301 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~-----~~~~~----~~~~--------~~~~~a~~~al~~a 301 (426)
++++||||+|+||++.+. +.++++ ....+++. +...| ..++ ..+.++++++|+++
T Consensus 154 ~~~~gdGa~A~vl~~~~~----~~~i~~----~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~a 225 (313)
T 1zow_A 154 AVLFGDGAGAVIIGEVSE----GRGIIS----YEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKA 225 (313)
T ss_dssp HTTBCEEEEEEEEEECST----TCEEEE----EEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeeccceEEEEEEecCC----CCceeE----EEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHc
Confidence 899999999999997653 234433 32333322 11111 1122 25678999999999
Q ss_pred CCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCC
Q 014349 302 GLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNL 381 (426)
Q Consensus 302 gl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~ 381 (426)
|++++|||||++|+++++..|.+ .+.|+... .+++ ..|..+||+.+|++++.|..++ +++.+
T Consensus 226 gl~~~did~~~~H~~~~~~~d~~-----~~~lg~~~--~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~------ 287 (313)
T 1zow_A 226 NLTSDDIDLFIPHQANIRIMESA-----RERLGISK--DKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKL------ 287 (313)
T ss_dssp TCCGGGCSEEEECCSCHHHHHHH-----HHHHTCCG--GGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCC------
T ss_pred CCCHHHCCEEEEcCCCHHHHHHH-----HHHhCCCH--HHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCC------
Confidence 99999999999999999987763 45565432 1233 3588999999999999887653 33321
Q ss_pred CCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 382 AKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.+.+.+++.+||.|.+..+++|+-
T Consensus 288 -------------------~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 288 -------------------KDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp -------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred -------------------CCCCEEEEEEEchhhhheEEEEEe
Confidence 124688899999999999999863
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=227.79 Aligned_cols=250 Identities=18% Similarity=0.167 Sum_probs=182.2
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
.++..+|+++|+++||++||+++++++ +|++|++.+.. . ....+.+++.
T Consensus 57 ~~~~~~la~~Aa~~al~~ag~~~~~id-----~vi~gt~~~~~---------------------~-----~p~~a~~v~~ 105 (339)
T 1mzj_A 57 DETIQVMGVAASRRALEHAGVDPAEID-----LVVVSTMTNFV---------------------H-----TPPLSVAIAH 105 (339)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC---------------------C-----SSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC---------------------C-----CChHHHHHHH
Confidence 456889999999999999999988876 89998864321 0 1125789999
Q ss_pred HcCCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 159 KYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 159 ~lgl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
.||++ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.+. +. +. ++.+.
T Consensus 106 ~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~----------~~-------------~~d~~ 161 (339)
T 1mzj_A 106 ELGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DV----------ID-------------LADRS 161 (339)
T ss_dssp HHTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GG----------SC-------------SSCTT
T ss_pred HhCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------cC-------------ccccc
Confidence 99998 69999999999999999999999999999999999999742 21 00 11246
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEE-EeEEEecCCCCCC--CCC-------------CCh--------HHHHHH
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHIT--QPH-------------IDG--------KGAILA 293 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i-~g~~~~~d~~~~~--~~~-------------~~~--------~~~~~a 293 (426)
+++++||||+|+||++.+. .++++.. .+.+...+..+.. .|. .++ ..+.++
T Consensus 162 ~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 236 (339)
T 1mzj_A 162 LSFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPA 236 (339)
T ss_dssp TTTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHH
T ss_pred cceEeccCceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHH
Confidence 7999999999999997642 2343322 1111111111111 011 012 456789
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhC
Q 014349 294 MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHG 373 (426)
Q Consensus 294 ~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~ 373 (426)
++++|+++|++++|||||++|+++++.+|. +.+.++.... .+++ .....+||+.+|+..+.|.++ ++.+
T Consensus 237 i~~aL~~agl~~~did~v~~H~~~~~~~d~-----i~~~lg~~~~-~~~~--~~~~~~Gn~~sAs~~~~L~~~---~~~g 305 (339)
T 1mzj_A 237 AREALEVAGLTVGDLVAFVPHQANLRIIDV-----LVDRLGVPEH-VVVS--RDAEDTGNTSSASVALALDRL---VRSG 305 (339)
T ss_dssp HHHHHHTTTCCGGGCSEEEECCSCHHHHHH-----HHHHHTCCTT-SEEC--CTHHHHCBCTTHHHHHHHHHH---HHHT
T ss_pred HHHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHhCCCcc-ceee--ehhhhcCchHHHHHHHHHHHH---HHcC
Confidence 999999999999999999999999998774 4555654321 0232 334689999999999887655 3444
Q ss_pred CcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 374 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 374 ~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.+ .+.+.++..+||.|.+..+++|+.
T Consensus 306 ~~-------------------------~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 306 AV-------------------------PGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp SS-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CC-------------------------CCCCEEEEEEEchhheeEEEEEEe
Confidence 32 124578889999999999999974
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-28 Score=242.41 Aligned_cols=311 Identities=14% Similarity=0.071 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcCC
Q 014349 83 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 162 (426)
Q Consensus 83 ~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl 162 (426)
..|+.+|+++||+|||+++.+++ ..-.|+++....... .+...........+..++..+|+
T Consensus 43 ~dL~a~Ai~~AL~dAGl~p~~Vd-~vI~g~~~~~~~~~~------------------~~~~~~~g~~~~~~~~va~~lGl 103 (520)
T 4egv_A 43 VELATEAAKAALHDCGADADTVA-RAIDTVAGTRQFEIS------------------GPASAPLGVSSNYPRSVARNIGA 103 (520)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHH-HHCCEEEECCC--------------------------------CCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCcCHHHcc-eEEEEEeeccccccc------------------chhhhhhccccCHHHHHHHHcCC
Confidence 46889999999999999887653 111244443321100 00111122334567789999999
Q ss_pred CC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhh---------------------------
Q 014349 163 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK--------------------------- 214 (426)
Q Consensus 163 ~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~--------------------------- 214 (426)
.+ +..++..+|+|++.+|..|++.|++|++|++|++|+|+|++.........
T Consensus 104 ~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 183 (520)
T 4egv_A 104 DPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYT 183 (520)
T ss_dssp CCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTT
T ss_pred CCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHH
Confidence 87 67889999999999999999999999999999999999865322110000
Q ss_pred ----------------hhhcccc---------------------cCCCCCCCC--------------------cccccCC
Q 014349 215 ----------------SRALTTK---------------------YNGTPQEAS--------------------RPFDCGR 237 (426)
Q Consensus 215 ----------------~~~l~~~---------------------~~~~~~~~~--------------------~pf~~~~ 237 (426)
...+... ...+|+... .|+-.-.
T Consensus 184 ~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~ 263 (520)
T 4egv_A 184 IRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLM 263 (520)
T ss_dssp GGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGG
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCccccc
Confidence 0000000 000111111 1222223
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC--CCCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAH 314 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~~~~~~~-~~~~~~~a~~~al~~agl~~~dId~v~~h 314 (426)
+...++|||+|+||.+++.|++.|.+++++|.+++...... ....|+. ...+...+++++|+++|++++|||++|+|
T Consensus 264 nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~ 343 (520)
T 4egv_A 264 VARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLY 343 (520)
T ss_dssp CC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEEC
T ss_pred ccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEe
Confidence 45568999999999999999999999988888776654321 1222221 24567899999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHhhccc-CCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCC
Q 014349 315 ATSTPLGDTVEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFM 393 (426)
Q Consensus 315 gtgt~~~D~~E~~a~~~~~~~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~ 393 (426)
.. .+++..+..+.++... ...++.++..+.++||+++++|+..+++++++||++..+..+. .+++.+.+...
T Consensus 344 dA-----F~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~~ 416 (520)
T 4egv_A 344 SC-----FPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKYS 416 (520)
T ss_dssp CS-----SSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEEE
T ss_pred CC-----cHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeeee
Confidence 21 1223333334444311 1246777788889999999999999999999999998877655 46666655421
Q ss_pred ---ccccCCCCC----CcEEEEeccccccceeeeEeee
Q 014349 394 ---PLTASKDMP----ISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 394 ---~~~~~~~~~----~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
...++++|+ .+++.+++ +|+|++|+.
T Consensus 417 ~~~l~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~~ 449 (520)
T 4egv_A 417 VGIYSTEPADWVADNSAQLQAEHD-----AQPKVAITE 449 (520)
T ss_dssp EEEEESSCCCCCCCCHHHHHHHHH-----TSCCCCBCS
T ss_pred EEEEcCCCCCCCCCCCCccccccc-----CCCCccccc
Confidence 113344443 34444433 778887764
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-26 Score=216.84 Aligned_cols=245 Identities=17% Similarity=0.217 Sum_probs=180.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
++..+|+++|+++||+++|+ ++++ .|+++++.+. +. ....+.+++..
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id-----~vi~~t~~~~---------------------~~-----~p~~a~~v~~~ 97 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVD-----AVVLATSTGD---------------------FC-----CPATAPRVAAR 97 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCS-----EEEEECSSCS---------------------EE-----ESCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCC-----EEEEEeCCCC---------------------CC-----CChHHHHHHHH
Confidence 56889999999999999999 5665 7888875422 11 11356799999
Q ss_pred cCCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 160 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 160 lgl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
||++ +|++++.++|+|++.||..|+++|++|.+|.+||+|+|.+. +.. . ++.+.+
T Consensus 98 lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~~----------~-------------~~d~~~ 153 (331)
T 2x3e_A 98 LGLVGALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFS-HTL----------D-------------PADRST 153 (331)
T ss_dssp TTCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GGS----------C-------------TTCHHH
T ss_pred hCCCCCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccc-cCC----------C-------------cccccc
Confidence 9998 79999999999999999999999999999999999999742 210 0 112346
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC---CCCCCC----------------CCh--------HHHH
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQPH----------------IDG--------KGAI 291 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~~~----------------~~~--------~~~~ 291 (426)
++++||||+|+||++.+.| ++.++++ ....+++. ++..|. .++ ..+.
T Consensus 154 ~~~~GdGA~A~vL~~~~~a--~~~~i~~----~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~ 227 (331)
T 2x3e_A 154 RALFGDGAGAVVLRAGDAE--EEGALLA----FDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMS 227 (331)
T ss_dssp HHHBCCEEEEEEEEEECTT--STTBEEE----EEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHH
T ss_pred ceeeccccEEEEEEecCCC--CCCceEE----EEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHH
Confidence 8899999999999987654 3344443 33333432 111111 122 4567
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHH
Q 014349 292 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIH 371 (426)
Q Consensus 292 ~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 371 (426)
++++++|+++|++++|||||.+|+++++..|. +.+.++... .+++. ....+||+.+|+..+.|..+ ++
T Consensus 228 ~~i~~aL~~agl~~~did~~~~H~~~~~~~d~-----~~~~lg~~~--~~~~~--~~~~~Gnt~sAs~~~~L~~~---~~ 295 (331)
T 2x3e_A 228 DSVRRVLDRVGWQASDLHHLVPHQANTRILAA-----VADQLDLPV--ERVVS--NIAEVGNTVAASIPLALAHG---LR 295 (331)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCCCHHHHHH-----HHHHHTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCH--HHHhh--hHhhhCcHHHHHHHHHHHHH---HH
Confidence 89999999999999999999999999998765 455565432 12333 35799999999988877654 34
Q ss_pred hCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 372 HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 372 ~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
++.+ .+.+.++..+||.|.+..+++|+-
T Consensus 296 ~~~~-------------------------~~G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 296 QGIL-------------------------RDGGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp TTCS-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred hCCC-------------------------CCCCEEEEEEEeHHhhheeeEEEE
Confidence 4332 124688899999999999999974
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=214.24 Aligned_cols=250 Identities=20% Similarity=0.225 Sum_probs=178.4
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHH
Q 014349 79 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 158 (426)
Q Consensus 79 ~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 158 (426)
.++..+|+++|+++||+++|+++++++ +|++++..+.. . ....+.+++.
T Consensus 58 ~~~~~~la~~A~~~al~~ag~~~~~id-----~vi~~t~~~~~---------------------~-----~~~~a~~v~~ 106 (335)
T 1u6e_A 58 DESAASMATEACRRALSNAGLSAADID-----GVIVTTNTHFL---------------------Q-----TPPAAPMVAA 106 (335)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC---------------------S-----SSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------C-----CChHHHHHHH
Confidence 456889999999999999999988886 89998854321 1 1246789999
Q ss_pred HcCCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 159 KYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 159 ~lgl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
.||++ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.+.. ...|++ ..
T Consensus 107 ~lgl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-----------------------~~~~~d-~~ 162 (335)
T 1u6e_A 107 SLGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP-----------------------TIDMYD-RG 162 (335)
T ss_dssp HHTCTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG-----------------------GCCTTC-TT
T ss_pred HhCCCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc-----------------------ccCccc-cc
Confidence 99998 599999999999999999999999999999999999997431 122333 35
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeE-EEecCCCCCC--------CC-------CCCh--------HHHHHH
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGY-GMSGDAHHIT--------QP-------HIDG--------KGAILA 293 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~-~~~~d~~~~~--------~~-------~~~~--------~~~~~a 293 (426)
+++++||||+++||++.+. ++ ++..+.+. +...+..+.. .| ..++ ..+.++
T Consensus 163 ~~~~~gDGA~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 237 (335)
T 1u6e_A 163 NCFIFADGAAAVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDV 237 (335)
T ss_dssp TTTTBCEEEEEEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHH
T ss_pred cceEeccccEEEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHH
Confidence 7899999999999997653 12 33333221 1111100000 00 1112 256788
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhC
Q 014349 294 MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHG 373 (426)
Q Consensus 294 ~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~ 373 (426)
++++|+++|++++|||++++|+++++..|. +.+.++.... .+ +...+..+||+.+|+..+.+..+ ++.+
T Consensus 238 i~~al~~agl~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~-~~--~~~~~~~~Gnt~sAs~~~~L~~~---~~~~ 306 (335)
T 1u6e_A 238 GRRAMDAAGVRPDQIDVFVPHQANSRINEL-----LVKNLQLRPD-AV--VANDIEHTGNTSAASIPLAMAEL---LTTG 306 (335)
T ss_dssp HHHHHHHHTCCGGGCCEEEECCSCHHHHHH-----HHHHHTCCTT-CE--ECCTHHHHCBCGGGHHHHHHHHH---HHHT
T ss_pred HHHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCch-hh--hhhhhhhhCcHHHHHHHHHHHHH---HHcC
Confidence 999999999999999999999999997665 4455654321 12 23346789999999965433222 2222
Q ss_pred CcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 374 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 374 ~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
. ..+.+.+++++||+|+++.++||+.
T Consensus 307 ~-------------------------~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 307 A-------------------------AKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp S-------------------------SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred C-------------------------CCCCCEEEEEEEehhheeEEEEEEe
Confidence 1 1224689999999999999999975
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=216.79 Aligned_cols=256 Identities=17% Similarity=0.149 Sum_probs=183.7
Q ss_pred CChhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhh
Q 014349 71 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 150 (426)
Q Consensus 71 ~~~~~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (426)
++++.....++..+|+++|+++||+++|+++++++ .|++++.. |+. ..
T Consensus 73 ~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~id-----~vi~~t~~----------------------~~~-----~p 120 (382)
T 1u0m_A 73 FEDRNKVYEREAKSRVPAVIQRALDDAELLATDID-----VIIYVSCT----------------------GFM-----MP 120 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSS----------------------SCC-----SS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEEecC----------------------CCC-----CC
Confidence 34455555567789999999999999999888776 77887743 111 12
Q ss_pred HHHHHHHHHcCCCC--Ceeec-cCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCC
Q 014349 151 MASGHVSMKYGFQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 227 (426)
Q Consensus 151 ~~a~~i~~~lgl~g--p~~~v-~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (426)
..+.+|+..||+++ |++++ .++|+|++.||..|+++|++|.++.+||+|+|.++ +.
T Consensus 121 ~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~-------------------- 179 (382)
T 1u0m_A 121 SLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCS-LC-------------------- 179 (382)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGG-GG--------------------
T ss_pred cHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-hh--------------------
Confidence 45779999999998 88999 89999999999999999999999999999999742 11
Q ss_pred CCCcccccCCC----cceeccceEEEEecchHHHHhcCCeeeEEEEeEEE--ecCCCC----------------CCCCCC
Q 014349 228 EASRPFDCGRD----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHH----------------ITQPHI 285 (426)
Q Consensus 228 ~~~~pf~~~~~----G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~--~~d~~~----------------~~~~~~ 285 (426)
.+|++..++ ++++||||+|+||++.+. ++ .+|.++.. ..++.+ ...+..
T Consensus 180 --~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~---~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~ 250 (382)
T 1u0m_A 180 --YQPTDLGVGSLLCNGLFGDGIAAAVVRGRGG---TG----VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPAT 250 (382)
T ss_dssp --CCTTCCSHHHHHHHHHBCEEEEEEEEETTTC---SE----EEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGG
T ss_pred --cCcccCCHHHhhccchhcCCcEEEEEeccCC---CC----cEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHH
Confidence 123443333 899999999999997643 22 24555443 233321 011222
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCccee-cccccccchhHHhHHHHHHH
Q 014349 286 DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF-SSTKGAIGHLLGAAGAVEAI 364 (426)
Q Consensus 286 ~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v-~s~k~~~Gh~~~AsG~~~l~ 364 (426)
....+. +++++|+++|++++|||||++|+++++..|. +.+.++... .+++. ...+..+||+.+|+..+.|.
T Consensus 251 ~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i~d~-----~~~~lgl~~--~k~~~s~~~~~~~Gnt~sAsi~~~L~ 322 (382)
T 1u0m_A 251 MEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRILDD-----LSTFLEVDP--HAFRFSRATLTEYGNIASAVVLDALR 322 (382)
T ss_dssp HHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHHHHH-----HHHHSCSCG--GGGHHHHHHHHHTCBCTTHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCH--HHHHHHHHHHHHhCCchhhHHHHHHH
Confidence 235566 9999999999999999999999999887664 344444321 13333 24677999999999887776
Q ss_pred HHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 365 FAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 365 ~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.++ +.+.+ .+.+.++..+||.|.+..+++|+-
T Consensus 323 ~~~---~~g~~-------------------------~~Gd~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 323 RLF---DEGGV-------------------------EEGARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp HHH---HSCCC-------------------------CSSCCCEEEEEETTTEEEEEEEEE
T ss_pred HHH---HhcCC-------------------------CCCCEEEEEEEcccceeEEEEEEE
Confidence 554 34432 113466778999998988888864
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-24 Score=207.25 Aligned_cols=266 Identities=13% Similarity=0.082 Sum_probs=187.5
Q ss_pred CCccCC-CChhhhhcc-----CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccC
Q 014349 65 FNEDSW-LNSKDHRSI-----ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRR 138 (426)
Q Consensus 65 fd~~~~-~~~~~~~~~-----~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~ 138 (426)
||+.+| .+.++...+ ++..+|+++|+++||++||+++++++ .|+++++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id-----~vi~~t~~~------------------- 127 (374)
T 2h84_A 72 PENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT-----HIVSVTSTG------------------- 127 (374)
T ss_dssp GGGCGGGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC-------------------
T ss_pred cccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC-------------------
Confidence 666655 444444555 78899999999999999999988886 788887431
Q ss_pred CCCcchhhhhhhHHHHHHHHHcCCCC--Ceeecc-CCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhh
Q 014349 139 LSPFFIPRILINMASGHVSMKYGFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKS 215 (426)
Q Consensus 139 ~~~~~~~~~~~~~~a~~i~~~lgl~g--p~~~v~-~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~ 215 (426)
+. ....+.+|+..||+++ |++.+. ++|+|++.||..|+++|++|.++.|||+|+|.++...
T Consensus 128 ---~~-----~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~-------- 191 (374)
T 2h84_A 128 ---II-----IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHF-------- 191 (374)
T ss_dssp ---CC-----SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGC--------
T ss_pred ---CC-----CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhh--------
Confidence 11 1235779999999997 789996 8999999999999999999999999999999743110
Q ss_pred hhcccccCCCCCCCCcccccC--CCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEec--CCCCC-----------
Q 014349 216 RALTTKYNGTPQEASRPFDCG--RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG--DAHHI----------- 280 (426)
Q Consensus 216 ~~l~~~~~~~~~~~~~pf~~~--~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~--d~~~~----------- 280 (426)
..|.+.+ ..++++||||+|+||++.+.++.++ ++ ++.+.+... ++...
T Consensus 192 --------------~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~ 254 (374)
T 2h84_A 192 --------------SNTDGGDQMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCSINRSFPNTENAMVWDLEKEGWN 254 (374)
T ss_dssp --------------CCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEEEEEECSSCTTSEEEEEETTEEE
T ss_pred --------------cCCCCHHHHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEeeeeEEeCCCcccceeEEecCcEE
Confidence 0111211 1478999999999999876543222 33 666655431 11100
Q ss_pred --CCCC---CChHHHHHHHHHHHHHcC------CCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccc
Q 014349 281 --TQPH---IDGKGAILAMTRALKQSG------LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STK 348 (426)
Q Consensus 281 --~~~~---~~~~~~~~a~~~al~~ag------l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k 348 (426)
..+. .....+.++++++|+++| ++++|||++ +|+++++..|. +.+.++... .+++++ ...
T Consensus 255 ~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~-----~~~~lgl~~--~k~~~s~~~~ 326 (374)
T 2h84_A 255 LGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMN-----IENSLGIDP--KQTKNTWDVY 326 (374)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHH-----HHHHTTCCG--GGGHHHHHHH
T ss_pred EEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHH-----HHHHcCCCH--HHHHHHHHHH
Confidence 0000 012456778999999999 999999999 99999987664 344454322 234433 456
Q ss_pred cccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 349 GAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 349 ~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
..+||+.+|+-.+.|..++ +.+. +.+.++..+||-|-+..+++|+.+
T Consensus 327 ~~~Gnt~sasi~~~L~~~~---~~~~---------------------------~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 327 HAYGNMSSASVIFVMDHAR---KSKS---------------------------LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp HHHCBCTTHHHHHHHHHHH---TCSC---------------------------CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHhCCchhhHHHHHHHHHH---hhcC---------------------------CCCeEEEEEeccchhhhhhhheec
Confidence 7899999998777666553 2111 245777889999888889998865
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-23 Score=204.27 Aligned_cols=255 Identities=16% Similarity=0.166 Sum_probs=180.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
.....|+.+|+++||+++|+++++++ .|++++..+ +. ....+.+|+..
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id-----~vi~~t~~~----------------------~~-----~p~~a~~v~~~ 158 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIG-----LLVLATSTG----------------------FI-----APGVDVAIVKE 158 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEE-----EEEEEESSC----------------------CC-----SSCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------Cc-----cChHHHHHHHH
Confidence 35678999999999999999876665 566676431 11 12456799999
Q ss_pred cCCCCC--eeec-cCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC
Q 014349 160 YGFQGP--NHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236 (426)
Q Consensus 160 lgl~gp--~~~v-~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 236 (426)
||++++ .+.+ .++|+|++.||..|+++|++|.+|.+||+|+|.++... -|+.+
T Consensus 159 lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~------------------------~~~~~ 214 (393)
T 1ted_A 159 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA------------------------VFADD 214 (393)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC------------------------CCCSS
T ss_pred cCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccC------------------------CCCCC
Confidence 999875 5777 89999999999999999999999999999999743210 02233
Q ss_pred CC----cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEe--cCCCCCC-------------C---CCCChHHHHHHH
Q 014349 237 RD----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--GDAHHIT-------------Q---PHIDGKGAILAM 294 (426)
Q Consensus 237 ~~----G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~--~d~~~~~-------------~---~~~~~~~~~~a~ 294 (426)
++ ++++||||+|+||++.+.+..++. .+++|.+++.. .++.... . +......+.+++
T Consensus 215 r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i 293 (393)
T 1ted_A 215 INDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVV 293 (393)
T ss_dssp HHHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHH
Confidence 43 789999999999997664422232 45678877544 5543210 0 111123566889
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHHHHHhC
Q 014349 295 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHG 373 (426)
Q Consensus 295 ~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l~~~ 373 (426)
+++|+++|++++|||++.+|.++++..|.++ +.++... .+++++ .....+||+.+|+-.+.|..+ ++.+
T Consensus 294 ~~aL~~agl~~~dId~~~~H~~~~~i~d~~~-----~~lgl~~--~k~~~s~~~~~~~GNt~sAsi~~~L~~~---~~~g 363 (393)
T 1ted_A 294 TEMLWDNGLQISDIDLWAIHPGGPKIIEQSV-----RSLGISA--ELAAQSWDVLARFGNMLSVSLIFVLETM---VQQA 363 (393)
T ss_dssp HHHHHHTTCCGGGCSCEEECCSCHHHHHHHH-----HHHTCCG--GGGHHHHHHHHHHCBCTHHHHHHHHHHH---HHSC
T ss_pred HHHHHHcCCCHhHCCEEEECCCcHHHHHHHH-----HHcCCCH--HHHHHHHHHHHhhCCchHhHHHHHHHHH---HhcC
Confidence 9999999999999999999999998766543 3344321 123332 456789999999866655433 2333
Q ss_pred CcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 374 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 374 ~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.+ ..+.+.++..+||.|.+..+++|+..
T Consensus 364 ~~------------------------~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 364 ES------------------------AKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp SS------------------------SSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred cc------------------------CCCCCeEEEEEeccchhhhhhheeec
Confidence 21 01346788899999999999999764
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-24 Score=232.63 Aligned_cols=274 Identities=12% Similarity=0.062 Sum_probs=191.9
Q ss_pred hhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHH
Q 014349 73 SKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMA 152 (426)
Q Consensus 73 ~~~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (426)
.+..+.++....|+++|+++||++||+++++++ .|+++++.+ + ..+..
T Consensus 680 ~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId-----~ii~~t~~~----------------------~-----~~p~~ 727 (979)
T 3tsy_A 680 IRQEIITAEVPKLGKEAALKALKEWGQPKSKIT-----HLVFCTTSG----------------------V-----EMPGA 727 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------C-----CSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEEeeCC----------------------C-----CCCcH
Confidence 344444555677999999999999999988887 788877321 1 12356
Q ss_pred HHHHHHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCC
Q 014349 153 SGHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 229 (426)
Q Consensus 153 a~~i~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (426)
+..|+..||++++ ++.+.++|+|++.||..|.++|++|.++.|||+|+|.+.... ....
T Consensus 728 a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~------------------~~~~ 789 (979)
T 3tsy_A 728 DYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF------------------RGPS 789 (979)
T ss_dssp HHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC------------------CCCC
T ss_pred HHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe------------------eCCC
Confidence 7899999999874 489999999999999999999999999999999999732211 0011
Q ss_pred CcccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCC----------------hHHHHHH
Q 014349 230 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID----------------GKGAILA 293 (426)
Q Consensus 230 ~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~----------------~~~~~~a 293 (426)
...++...+++++||||+|+||++.+.+..++..++....+.....+..+...+... .....++
T Consensus 790 ~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 869 (979)
T 3tsy_A 790 EDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKC 869 (979)
T ss_dssp SSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred ccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHH
Confidence 122222334678999999999998777655666677766666665554432221111 1235788
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHHHHHh
Q 014349 294 MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHH 372 (426)
Q Consensus 294 ~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l~~ 372 (426)
++++|+++|++++||||+++|.++++..|.+ .+.++-.. .++..+ .....+||+.+||=.+.|..+...++.
T Consensus 870 ~~~al~~agl~~~did~~~~Hq~~~~i~~~~-----~~~lgl~~--~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~ 942 (979)
T 3tsy_A 870 LTQAFDPLGISDWNSLFWIAHPGGPAILDAV-----EAKLNLDK--KKLEATRHVLSEYGNMSSACVLFILDEMRKKSLK 942 (979)
T ss_dssp HHHHHGGGTCCCGGGSEEEECCSCHHHHHHH-----HHHHTCCT--TTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCcccceEEECCCChHHHHHH-----HHHcCCCh--HHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcc
Confidence 9999999999999999999999887765443 33344321 122222 235678999999988888776655544
Q ss_pred CCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 373 GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 373 ~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
|.. + .........+..+||.|-+..+++|+-
T Consensus 943 G~~-----------------v----~~g~~~~~~ll~~~G~G~t~~~~~l~~ 973 (979)
T 3tsy_A 943 GER-----------------A----TTGEGLDWGVLFGFGPGLTIETVVLHS 973 (979)
T ss_dssp TTC-----------------S----BTTTTCSEEEEEEECGGGEEEEEEEEC
T ss_pred ccc-----------------c----cCCCCcceeEEEEeCCchHHHHHHHHh
Confidence 321 0 111234567888999988888888874
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=188.30 Aligned_cols=261 Identities=18% Similarity=0.108 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++.... ......+.+++..+
T Consensus 67 ~~~~La~~Aa~~al~~ag~~~~~Id-----~vi~~t~~~~--------------------------~~~p~~a~~v~~~l 115 (345)
T 3s21_A 67 QASDAATQAARKALIDANIGIEKIG-----LLINTSVSRD--------------------------YLEPSTASIVSGNL 115 (345)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEECCSCCS--------------------------CSSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC--------------------------CCCChHHHHHHHHh
Confidence 4678999999999999999998887 8888874321 11124578899999
Q ss_pred CCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|++ .|++.|+.+|+|++.||..|+++|++|.++.+||+|+|.++.... +...+.++ +...|++|+....
T Consensus 116 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~---~~~~~~~~------~~~~~~~f~~~~~ 186 (345)
T 3s21_A 116 GVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYE---KTLERMTS------PDVTEEEFRNELA 186 (345)
T ss_dssp TCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHH---HHHHHHTC------TTCCHHHHHHHHG
T ss_pred CCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhc---cccccccC------Cccchhhhhhhcc
Confidence 996 699999999999999999999999999999999999998654322 12222222 2356788998889
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC--CCCC-----CCCh--------HHHHHHHHHHHHHcCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--ITQP-----HIDG--------KGAILAMTRALKQSGL 303 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~--~~~~-----~~~~--------~~~~~a~~~al~~agl 303 (426)
++++||||+|+||++.+... .+. .|.+.....++.+ ...+ ..++ ....++++++|+++|+
T Consensus 187 ~~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 261 (345)
T 3s21_A 187 ALTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGW 261 (345)
T ss_dssp GGGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999865321 112 3455555444322 1111 1111 1234677899999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Q 014349 304 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383 (426)
Q Consensus 304 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~ 383 (426)
+++|||++.+|-.+.+. ...+.+.++-.. .+++ ..-..+||+.+|+-.+.|..+ ++.+.+
T Consensus 262 ~~~did~~v~Hq~~~~i-----~~~~~~~lgl~~--ek~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~-------- 321 (345)
T 3s21_A 262 AVEELDQFVIHQVSRPH-----TAAFVKSFGIDP--AKVM--TIFGEHGNIGPASVPIVLSKL---KELGRL-------- 321 (345)
T ss_dssp CGGGCSEEEECCSCHHH-----HHHHHHHHTCCG--GGBC--CCHHHHCBCGGGHHHHHHHHH---HHHTCC--------
T ss_pred CHHHCCEEEeCCCCHHH-----HHHHHHHcCcCH--HHce--eeHhhcCchHHHHHHHHHHHH---HHcCCC--------
Confidence 99999999999665443 334444454321 1222 233578999999987776654 344432
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++..+||.|-+..+++|+
T Consensus 322 -----------------~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 322 -----------------KKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp -----------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -----------------CCCCEEEEEEEChhhhheEEEEE
Confidence 12356777899999888888875
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=184.23 Aligned_cols=242 Identities=18% Similarity=0.252 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+...|+.+|+++||+++|+++++++ .|++++..+.. .....+.+++..+
T Consensus 64 ~~~~la~~Aa~~al~~ag~~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~l 112 (333)
T 4dfe_A 64 TTSDLAFIASQRAIEAADIDPQSID-----LIIVATSTPDF--------------------------VFPSTACLLQNKL 112 (333)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSS--------------------------SBSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCcHHHHHHHHh
Confidence 4678999999999999999998887 89998754221 1124577899999
Q ss_pred CC--CCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl--~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|+ +.|++++..+|+|++.||..|+++|++|.++.+||+|+|.+.... .++.+..
T Consensus 113 gl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~------------------------~~~d~~~ 168 (333)
T 4dfe_A 113 GIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL------------------------DFKDRTT 168 (333)
T ss_dssp TCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC------------------------CTTCTTT
T ss_pred CCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc------------------------Ccccccc
Confidence 99 569999999999999999999999999999999999999743221 0222345
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC---CCCC--------------CCCh--------HHHHHH
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQP--------------HIDG--------KGAILA 293 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~~--------------~~~~--------~~~~~a 293 (426)
++++||||+|+||++.+. ..+ .++...+++.. ...| ..++ ..+.++
T Consensus 169 ~~lfGDGA~A~vl~~~~~-----~~i----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 239 (333)
T 4dfe_A 169 CVLFGDGAGAVILQASDE-----PGV----LASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKV 239 (333)
T ss_dssp TTTBCEEEEEEEEEEESS-----CSE----EEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHH
T ss_pred eeeeccccEEEEEEEcCC-----CCe----EEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHH
Confidence 788999999999997541 122 23333333321 0000 0111 345678
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhC
Q 014349 294 MTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHG 373 (426)
Q Consensus 294 ~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~ 373 (426)
++++|+++|++++|||++.+|..+.+. ...+.+.++-.. .+++. ....+||+.+|+=.+.|..+ ++.+
T Consensus 240 i~~~l~~~gl~~~did~~~~Hq~~~~i-----~~~~~~~lgl~~--~~~~~--~l~~~GNt~sasi~~~L~~~---~~~g 307 (333)
T 4dfe_A 240 AVEALEKANLSAEQIDWLIPHQANIRI-----MQSTCRKLGLPQ--ERMIV--TVGEHGNTSAASIPLALDVA---VRDG 307 (333)
T ss_dssp HHHHHHHTTCCGGGCSEEEECCSCHHH-----HHHHHHHTTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHH---HHTT
T ss_pred HHHHHHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHhCCCH--HHhhh--hHHhcCchHHHHHHHHHHHH---HHcC
Confidence 999999999999999999999766553 334444444321 12322 34578999999876665544 3444
Q ss_pred CcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 374 VAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 374 ~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+ .+.+.++..+||.|-+..+++|+
T Consensus 308 ~~-------------------------~~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 308 RI-------------------------KRGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp CS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred CC-------------------------CCCCEEEEEEEchhheeEEEEEE
Confidence 32 12346777799999888888886
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-18 Score=163.12 Aligned_cols=242 Identities=18% Similarity=0.168 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++..+.. .....+.+++..+
T Consensus 57 ~~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~l 105 (323)
T 3il3_A 57 TVATMGFEAAKNAIEAAQINPQDIE-----LIIVATTSHSH--------------------------AYPSAACQVQGLL 105 (323)
T ss_dssp CHHHHHHHHHHHHHHHHCCCGGGCC-----EEEEECSCCSC--------------------------SSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCccHHHHHHHHh
Confidence 3678999999999999999998887 88888754221 1123577899999
Q ss_pred CCC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++ .|++.+..+|+|++.||..|.++|++|.++.+||+|+|.++... + +..+...
T Consensus 106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------------------~-~~d~~~~ 161 (323)
T 3il3_A 106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKL-----------------------D-ETDRSTV 161 (323)
T ss_dssp TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSC-----------------------C-TTCTTTT
T ss_pred CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecccccc-----------------------C-ccccccc
Confidence 996 48999999999999999999999999999999999999743211 0 1112346
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC---CCCCC------------CCh--------HHHHHHHHH
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQPH------------IDG--------KGAILAMTR 296 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~~~------------~~~--------~~~~~a~~~ 296 (426)
+++||||+|+||++.+ +.. |.+....+++.. ...|. .++ ..+.+++++
T Consensus 162 ~lfGDGA~A~vl~~~~-----~~~----i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~ 232 (323)
T 3il3_A 162 VLFGDGAGAVILEASE-----QEG----IISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEE 232 (323)
T ss_dssp TTBCEEEEEEEEEEES-----SCC----EEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHH
T ss_pred cccccceEEEEEEEcC-----CCC----eEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHH
Confidence 7899999999998754 122 233333333321 00110 011 223467889
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcC
Q 014349 297 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAP 376 (426)
Q Consensus 297 al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~p 376 (426)
+|+++|++++|||++..|-.+.+ -...+.+.++-.. .+++. .-..+||+.+|+=.+.|..+ ++.+.+
T Consensus 233 ~l~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~lgl~~--ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~- 299 (323)
T 3il3_A 233 TLLANNLDKKDLDWLVPHQANLR-----IITATAKKLEMDM--SQVVV--TLDKYANNSAATVPVALDEA---IRDGRI- 299 (323)
T ss_dssp HHHTTTCCTTTCCEEEECCSCHH-----HHHHHHHHTTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTSS-
T ss_pred HHHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHcCcCH--HHhhc--cHhhcCchHHHHHHHHHHHH---HHcCCC-
Confidence 99999999999999999954433 2334444444321 12222 23467999999877666554 344432
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 377 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 377 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++..+||.|-+-.++||+
T Consensus 300 ------------------------~~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 300 ------------------------QRGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp ------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 12356777899999999888886
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-18 Score=165.87 Aligned_cols=248 Identities=16% Similarity=0.138 Sum_probs=164.5
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
.....|+.+|+++||+++|+++++++ .|++++..... ..+..+.+|+..
T Consensus 115 ~~~~~La~~Aa~~AL~~agi~~~dId-----~vi~~t~t~~~--------------------------~~p~~a~~v~~~ 163 (392)
T 3led_A 115 SILAEMAVTAAEQAIERWGKPRERIG-----AVLCACSNMQR--------------------------AYPAMAIEVQNA 163 (392)
T ss_dssp CHHHHHHHHHHHHHHHHHCSCGGGEE-----EEEEESSCCSC--------------------------SBSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------CccHHHHHHHHH
Confidence 34678999999999999999887776 78888753221 112467789999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
+|++.+++.|..+|+|++.||..|.++|++|.++.|||+|+|.++... . +..+...
T Consensus 164 LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~~-----------------------d-~~dr~t~ 219 (392)
T 3led_A 164 LGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSGHL-----------------------N-FRDRDSH 219 (392)
T ss_dssp TTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------------C-TTCTTTT
T ss_pred hCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCcC-----------------------C-cCcccCC
Confidence 999889999999999999999999999999999999999999742211 0 1112346
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-C------C---CC----------CCCh--------HHHH
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-I------T---QP----------HIDG--------KGAI 291 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-~------~---~~----------~~~~--------~~~~ 291 (426)
+++||||+|+||++.+... ....|.+....+++.. + . .+ ..++ ..+.
T Consensus 220 ~lFGDGA~A~vl~~~~~~~-----~~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~ 294 (392)
T 3led_A 220 FIFGDVATAAIVERADDAQ-----GGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVS 294 (392)
T ss_dssp TTBCEEEEEEEEEEGGGCC-----SSEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHH
T ss_pred cccccccEEEEEEecCCCC-----CCCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHH
Confidence 7899999999998754210 1123455444433221 0 0 00 0011 1234
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHH-HhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHH
Q 014349 292 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRT-VFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAI 370 (426)
Q Consensus 292 ~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~-~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 370 (426)
++++++|+++|++++|||++.+|-.+.. =..++.+ +++......+. ...-..+||+.+|+=.+.|.. +
T Consensus 295 ~~i~~~L~~~gl~~~dId~~v~Hqan~~-----i~~~~~~~llgl~~~~~k~--~~~l~~~GNtssAsipl~L~~----~ 363 (392)
T 3led_A 295 EMIIEHAREIGIDPHGLKRMWLHQANIN-----MNEIIGRKVLGRDPTRDEN--VIILDDYANTSSAGSIIAFHK----H 363 (392)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECSSCHH-----HHHHHHHHHHTSCCCTTTB--CCCHHHHCBCGGGHHHHHHHH----C
T ss_pred HHHHHHHHHcCCCHHHCcEEEEcCCCHH-----HHHHHHHHhcCCCCCHHHH--HHHHhhhCccHHHHHHHHHHH----H
Confidence 5788999999999999999999944322 2223333 33421100122 223457899988875554432 1
Q ss_pred HhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 371 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 371 ~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.+.+ .+.+.++..+||.|-+-.+++|++
T Consensus 364 -~~~~-------------------------~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 364 -QDDM-------------------------AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp -CTTC-------------------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred -hCCC-------------------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence 1111 123567778999998999999875
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=161.55 Aligned_cols=244 Identities=13% Similarity=0.105 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++..+. ......+.+++..+
T Consensus 79 ~~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~~--------------------------~~~p~~a~~v~~~l 127 (365)
T 3gwa_A 79 TAADLAYEAARKLFAQGAVGADQVD-----FVILCTQAPD--------------------------YVLPTSACMLQHRL 127 (365)
T ss_dssp CHHHHHHHHHHHHHHTTSCCGGGCC-----EEEEEESSCS--------------------------CSBSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC--------------------------CCCCcHHHHHHHHc
Confidence 4678999999999999999998887 8888874321 11123577899999
Q ss_pred CCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|++ .+++.|..+|+|++.||..|.++|++|.++.+||+|+|.++.... +. | +..
T Consensus 128 Gl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~~-----------------~~------d-r~~ 183 (365)
T 3gwa_A 128 GIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLH-----------------PL------D-KSV 183 (365)
T ss_dssp TCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSC-----------------TT------C-HHH
T ss_pred CCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccCC-----------------cc------c-ccc
Confidence 997 589999999999999999999999999999999999998543210 00 0 112
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC----------CCCCCC------------------C----C
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH----------HITQPH------------------I----D 286 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~----------~~~~~~------------------~----~ 286 (426)
..++||||+|+||++.+.. ...++ .+...+++. ....|. . +
T Consensus 184 ~~lfGDGAaA~vl~~~~~~---~~~i~----~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~ 256 (365)
T 3gwa_A 184 RTLFGDGASATAVIAEHGE---LERIG----PFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMN 256 (365)
T ss_dssp HTTBCCEEEEEEEEEECSS---SCSEE----EEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEEC
T ss_pred cccccceeEEEEEEecCCC---CCceE----EEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEec
Confidence 4579999999999875421 01122 222222211 000000 0 1
Q ss_pred h--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhH
Q 014349 287 G--------KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAA 358 (426)
Q Consensus 287 ~--------~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~As 358 (426)
+ ....++++++|+++|++++|||++.+|-.+.+ =...+.+.++-.. .+++ ..-..+||+.+|+
T Consensus 257 g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~-----i~~~~~~~Lgl~~--ek~~--~~l~~~GNtssAs 327 (365)
T 3gwa_A 257 GAEVMAFSLAEVPRAADRLLALAGEPRENIDCFVLHQANRF-----MLDALRKKMKIPE--HKFP--VLMEHCGNTVSST 327 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH-----HHHHHHHHHTCCG--GGSC--CCCTTTCBCGGGH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHhCCCH--HHHH--HHHhcccchHHHH
Confidence 1 23346789999999999999999999954433 2344555554322 1232 2345889999998
Q ss_pred HHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 359 GAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 359 G~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
=.+.|..+ ++.+.+ .+.+.++..+||.|-+..++||+
T Consensus 328 ipl~L~~~---~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 328 LPLALETM---RANGTL-------------------------ARGMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp HHHHHHHH---HHTTCC-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHH---HHcCCC-------------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 76655443 344432 12356777899999999888886
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.3e-19 Score=172.45 Aligned_cols=245 Identities=14% Similarity=0.081 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEE-EEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTG-VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~g-v~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
+...|++.|+++||++ +++ ++|+ |++|+..+. ......+..|+..
T Consensus 50 ~~~~la~~Aa~~aL~~--~~~------~~Id~li~~t~~~~--------------------------~~~p~~a~~v~~~ 95 (396)
T 1xpm_A 50 DIVSMGANAAKDIITD--EDK------KKIGMVIVATESAV--------------------------DAAKAAAVQIHNL 95 (396)
T ss_dssp CHHHHHHHHHHTTCCH--HHH------HHEEEEEEECSSCS--------------------------BSSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc--CCH------HHCCEEEEEeCCCC--------------------------CCCCCHHHHHHHH
Confidence 4678999999999987 433 4455 555764321 0112466789999
Q ss_pred cCCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 160 YGFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 160 lgl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
||+++ +++.+.++|+|++.||..|.++|++|.++.+||+|+|. .... ++ ..
T Consensus 96 lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~-------------------------~~-~~ 148 (396)
T 1xpm_A 96 LGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-ARYG-------------------------LN-SG 148 (396)
T ss_dssp TTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-ECCC-------------------------TT-CS
T ss_pred hCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hccc-------------------------cC-CC
Confidence 99974 99999999999999999999999999999999999995 1110 11 13
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEec-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcC
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-DAHHITQPHI------DGKG--------AILAMTRALKQSG 302 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~-d~~~~~~~~~------~~~~--------~~~a~~~al~~ag 302 (426)
+++++||||+|+||++. ..+++...+.+... +..+...|.. ++.. +.++++++|+++|
T Consensus 149 ~~~~~GdGA~A~vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~ag 221 (396)
T 1xpm_A 149 GEPTQGAGAVAMVIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQG 221 (396)
T ss_dssp SGGGCEEEEEEEEEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcccccceEEEEeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcC
Confidence 58899999999999863 23555555443333 3333223322 4433 5678999999999
Q ss_pred CCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcc-----eecccccccchhHHhHHHHHHHHHHHHHHhCCcCC
Q 014349 303 LQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL-----AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPL 377 (426)
Q Consensus 303 l~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~-----~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp 377 (426)
++++|||++..|.++++..|......+....+... .++ |-......+||+.+||-.+.|..++ +++.+
T Consensus 222 l~~~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~--e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l---~~~~l-- 294 (396)
T 1xpm_A 222 KSLADFASLCFHVPFTKMGKKALESIIDNADETTQ--ERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLL---ENRDL-- 294 (396)
T ss_dssp CCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHH--HHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHH---HHSCC--
T ss_pred CCHHHCCEEEecCCchHHHHHHHHHHHhhcccCCH--HHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHH---HcCCC--
Confidence 99999999999999998877654222111000000 001 1112246799999999887776654 33332
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 378 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.+.++..+||-|-+..+++++
T Consensus 295 -----------------------~~Gd~ill~s~GsG~~~~~~~~~ 317 (396)
T 1xpm_A 295 -----------------------QAGETIGLFSYGSGSVGEFYSAT 317 (396)
T ss_dssp -----------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -----------------------CCCCEEEEEEECcchhheEEEEE
Confidence 12346777788866555555554
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-18 Score=166.25 Aligned_cols=268 Identities=10% Similarity=0.050 Sum_probs=177.4
Q ss_pred CChhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhh
Q 014349 71 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 150 (426)
Q Consensus 71 ~~~~~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (426)
+..+....+.....|+.+|+++||+++|+++++++ .|++++..+ . ..+
T Consensus 87 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~----------------------~-----~~p 134 (387)
T 3a5r_A 87 LNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-----HLIVCCLAG----------------------V-----DMP 134 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------C-----EES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCC----------------------C-----CCC
Confidence 34455555677889999999999999999988887 788887431 1 122
Q ss_pred HHHHHHHHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCC
Q 014349 151 MASGHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 227 (426)
Q Consensus 151 ~~a~~i~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (426)
..+.+|+..+|+++. .+.+..+|+|++.||..|.++|++|.++.|||+|+|.++..+
T Consensus 135 ~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-------------------- 194 (387)
T 3a5r_A 135 GADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCF-------------------- 194 (387)
T ss_dssp CHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTTC--------------------
T ss_pred cHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchhh--------------------
Confidence 467899999999875 788999999999999999999999999999999999743211
Q ss_pred CCCcccc----cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC--CC-------------CCC---C
Q 014349 228 EASRPFD----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--IT-------------QPH---I 285 (426)
Q Consensus 228 ~~~~pf~----~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~--~~-------------~~~---~ 285 (426)
..|++ ....++++||||+|+||++.+.. .-..+..++.+.+....... .. .+. .
T Consensus 195 --~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~--~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~ 270 (387)
T 3a5r_A 195 --RGPSETHLDSMIGQAILGDGAAAVIVGADPDL--TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTL 270 (387)
T ss_dssp --CCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT--TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHH
T ss_pred --cCCCccchhhccccceeccceeEEEEecCCCc--cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHH
Confidence 11222 23357899999999999875431 10111234444433211110 00 000 0
Q ss_pred ChHHHHHHHHHHHHHcCCC-CCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHH
Q 014349 286 DGKGAILAMTRALKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEA 363 (426)
Q Consensus 286 ~~~~~~~a~~~al~~agl~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l 363 (426)
....+.++++++|+++|++ ++|| ++.+|-.+... ..++.+.++-.. .++..+ .....+||+.+|+-.+.|
T Consensus 271 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L 342 (387)
T 3a5r_A 271 ISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAI-----LDQVTAKVGLEK--EKLKVTRQVLKDYGNMSSATVFFIM 342 (387)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHH-----HHHHHHHcCCCh--HHhHHHHHHHHhcCCcchhHHHHHH
Confidence 1133456888999999998 8888 89999665443 223444444321 123332 346789999999988877
Q ss_pred HHHHHHHH-hCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 364 IFAVLAIH-HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 364 ~~~~~~l~-~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
..++..-+ .|.+. + ......++..+||.|-+..+++|+.
T Consensus 343 ~~~~~~g~~~G~~~---------------------~-G~~~d~vll~~fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 343 DEMRKKSLENGQAT---------------------T-GEGLEWGVLFGFGPGITVETVVLRS 382 (387)
T ss_dssp HHHHHHHHHTTCSB---------------------T-TTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHhccccCCCC---------------------C-CCCcceEEEEEecCcceeeehhhee
Confidence 77654321 11100 0 0012577788999988888888874
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-18 Score=167.60 Aligned_cols=267 Identities=12% Similarity=0.069 Sum_probs=177.3
Q ss_pred hhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHH
Q 014349 75 DHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASG 154 (426)
Q Consensus 75 ~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 154 (426)
....++....|+.+|+++||+++|+++.+++ .|+++++.+ . .....+.
T Consensus 118 ~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id-----~li~~t~~~----------------------~-----~~p~~a~ 165 (413)
T 1xes_A 118 QAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT-----HLIFCSTTT----------------------P-----DLPGADF 165 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESCC----------------------C-----EESCHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------C-----ccchHHH
Confidence 3344457789999999999999999988887 788887431 1 1124567
Q ss_pred HHHHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCc
Q 014349 155 HVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 231 (426)
Q Consensus 155 ~i~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (426)
+|+..||++++ .+.+..+|+|++.||..|.++|++|.++.|||+|+|.++..+ . .+. .+
T Consensus 166 ~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~-----------~-----~~~--d~ 227 (413)
T 1xes_A 166 EVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTF-----------R-----GPS--ET 227 (413)
T ss_dssp HHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTC-----------C-----CCC--TT
T ss_pred HHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhh-----------c-----CCC--cc
Confidence 89999999874 788999999999999999999999999999999999754311 0 011 13
Q ss_pred ccccCCCcceeccceEEEEecchHHHHhcC-CeeeEEEEeEEEec--CCCCC------------C-CCC---CChHHHHH
Q 014349 232 PFDCGRDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSG--DAHHI------------T-QPH---IDGKGAIL 292 (426)
Q Consensus 232 pf~~~~~G~~~geGa~alvL~~~~~A~~~g-~~~~a~i~g~~~~~--d~~~~------------~-~~~---~~~~~~~~ 292 (426)
+|+....++++||||+|+||++.+.. + .....++.+.+... +.... . ... .....+.+
T Consensus 228 ~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 304 (413)
T 1xes_A 228 HLDSLVGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIEN 304 (413)
T ss_dssp CHHHHHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHH
T ss_pred chhhcccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHH
Confidence 45556678999999999999875431 2 11113444443321 11000 0 000 01134556
Q ss_pred HHHHHHHHcCCC-CCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHHHH
Q 014349 293 AMTRALKQSGLQ-SHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAI 370 (426)
Q Consensus 293 a~~~al~~agl~-~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l 370 (426)
+++++|+++|++ .+|| ++.+|-.+... ...+.+.++-.. .++..+ .....+||+.+|+-.+.|..++..-
T Consensus 305 ~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl~~--ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g 376 (413)
T 1xes_A 305 CMVEAFSQFKISDWNKL-FWVVHPGGRAI-----LDRVEAKLNLDP--TKLIPTRHVMSEYGNMSSACVHFILDQTRKAS 376 (413)
T ss_dssp HHHHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHTTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCccce-eEEECCCCHHH-----HHHHHHHcCCCh--HHhHHHHHHHHhcCcCchhhHHHHHHHHHHhc
Confidence 888999999998 8888 79999654432 233444444321 233332 3456899999999888777765432
Q ss_pred H-hCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 371 H-HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 371 ~-~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
+ .|.+. + ......++..+||.|-+..+++|+.
T Consensus 377 ~~~G~~~---------------------~-G~~~d~vll~~fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 377 LQNGCST---------------------T-GEGLEMGVLFGFGPGLTIETVVLKS 409 (413)
T ss_dssp HHTTCSB---------------------T-TTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred cccCCCC---------------------C-CCCcceEEEEEecCCcEEeEEEEEe
Confidence 1 11100 0 0012577788999988888888875
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=160.22 Aligned_cols=245 Identities=16% Similarity=0.153 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++..+. + .....+.+++..+
T Consensus 73 ~~~~La~~Aa~~aL~~agl~~~dId-----~vi~~t~~~~---------------------~-----~~p~~a~~v~~~l 121 (359)
T 3h78_A 73 AVSALMVPAARQAIEAAGLLPEDID-----LLLVNTLSPD---------------------H-----HDPSQACLIQPLL 121 (359)
T ss_dssp CTHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSSCS---------------------S-----SBSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCC-----EEEEEeCCCC---------------------C-----CCCcHHHHHHHHc
Confidence 3578999999999999999998887 8888875421 1 1123577899999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++. |.+.+..+|+|++.||..|.++|++|.++.+||+++|.+..... +... .+...
T Consensus 122 Gl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~~-----------------~~d~-----~~~t~ 179 (359)
T 3h78_A 122 GLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMD-----------------CSDR-----GRNLS 179 (359)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGCC-----------------CSTT-----THHHH
T ss_pred CCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccCC-----------------cccc-----ccccc
Confidence 9975 89999999999999999999999999999999999997533210 0000 01134
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-----C------CCC--------C------CCh-------
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----I------TQP--------H------IDG------- 287 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-----~------~~~--------~------~~~------- 287 (426)
+++||||+|+||++.+. .+..+ .++...+++.. . ..+ . .++
T Consensus 180 ~lfGDGAaA~vl~~~~~---~~~~i----~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~ 252 (359)
T 3h78_A 180 ILLGDGAGAVVVSAGES---LEDGL----LDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHA 252 (359)
T ss_dssp TTBCEEEEEEEEECCSC---SSSEE----EEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHH
T ss_pred ceecceeEEEEEEecCC---CCCce----EEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHH
Confidence 67999999999987532 12222 33322222210 0 001 0 011
Q ss_pred -HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHH
Q 014349 288 -KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 288 -~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
..+.++++++|+++|++++|||++..|-.+.+. ...+.+.++-.. .+++. .-..+||+.+|+=.+.|..+
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i-----~~~~~~~lgl~~--ek~~~--~l~~~GNt~sAsi~l~L~~~ 323 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRI-----LDAVQEQLGIPQ--HKFAV--TVDRLGNMASASTPVTLAMF 323 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH-----HHHHHHHHTCCG--GGBCC--CHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCcCH--HHhhh--hhhcccchHHHHHHHHHHHH
Confidence 223467899999999999999999999544332 344444454321 12322 24477999999877666544
Q ss_pred HHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 367 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 367 ~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
+ +. + .+.+.++..+||.|-+..+++|+-
T Consensus 324 ~---~~--l-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 351 (359)
T 3h78_A 324 W---PD--I-------------------------QPGQRVLVLTYGSGATWGAALYRK 351 (359)
T ss_dssp G---GG--S-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred H---Hh--C-------------------------CCCCEEEEEEEchhhhheeeeEEe
Confidence 3 11 1 123467777999998999999874
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.2e-17 Score=156.71 Aligned_cols=246 Identities=16% Similarity=0.085 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++.... .|. .. ..+..++..+
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId-----~vi~~t~~~~-------------------~~d----~~--~~a~~v~~~l 102 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS-----LVLHSSLWFQ-------------------GID----LW--PAASYVAHEA 102 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECSSCC-------------------SSS----SS--CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC-------------------Ccc----cc--cHHHHHHHHh
Confidence 4678999999999999999887776 6777774200 111 11 2467899999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCC--EEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d--~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
|++. +.+.|..+|+|++.||..|.++|++|.++ .+||+|+|.++.+. ...++ ++
T Consensus 103 G~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------------------~~~~~-~~ 159 (357)
T 3s3l_A 103 VGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------------------IDRWN-SV 159 (357)
T ss_dssp TCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------------------CCTTT-SS
T ss_pred CCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------------------ccccc-cc
Confidence 9975 89999999999999999999999999999 99999999854321 00122 12
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC--C------CCC-------CCC--h-------------
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--I------TQP-------HID--G------------- 287 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~--~------~~~-------~~~--~------------- 287 (426)
..+++||||+|+||++.+. + ..|.++...+++.. . ..| ... +
T Consensus 160 ~~~lfGDGA~A~vl~~~~~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 231 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTRDG----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPD 231 (357)
T ss_dssp SSCCBCCEEEEEEEESSCC----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTT
T ss_pred CCcccccccEEEEEecCCC----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhh
Confidence 5788999999999987431 1 23555555444431 0 001 000 1
Q ss_pred ------HHHHHHHHHHHHHcCCCCCCccEEEe-cCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHH
Q 014349 288 ------KGAILAMTRALKQSGLQSHQVDYVNA-HATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGA 360 (426)
Q Consensus 288 ------~~~~~a~~~al~~agl~~~dId~v~~-hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~ 360 (426)
..+.++++++|+++|++++|||++.+ |-.+.. -+. +.+.++-.. .++. ......+||+.+|+-.
T Consensus 232 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~-----~~~~lgl~~--ek~~-~~~~~~~GNt~aAsip 302 (357)
T 3s3l_A 232 LTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHE-----LHDLLGLPD--ERTS-WAYGRTTGHVGAGDQY 302 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCC-----HHHHHTSCG--GGBT-HHHHHHHCBCTTCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHH-----HHHHcCCCH--HHhH-HHhccccccchHhHHH
Confidence 12446788999999999999999996 765544 443 333344321 1222 2233357999988866
Q ss_pred HHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 361 VEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 361 ~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
+.|..+ ++.+.+ .+.+.++..+||.|-+..+++|+-
T Consensus 303 l~L~~~---~~~g~l-------------------------~~Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 303 AGLAHL---VENALV-------------------------QPGDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp HHHHHH---HHTTCC-------------------------CTTCEEEEECCBTTTEEEEEEEEE
T ss_pred HHHHHH---HHcCCC-------------------------CCCCEEEEEEEchhhhheeeeEEe
Confidence 665544 344432 123567788999988888888874
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=159.73 Aligned_cols=243 Identities=12% Similarity=0.081 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++..+.. .....+.+++..+
T Consensus 65 ~~~~La~~Aa~~aL~~agi~~~~Id-----~vi~~t~~~~~--------------------------~~p~~a~~v~~~l 113 (354)
T 4efi_A 65 SAGDLCRKAGEKLLAGLGWQADSID-----ALIFVSQTPNY--------------------------RLPATAFVLQAEL 113 (354)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC--------------------------SSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC--------------------------CCCcHHHHHHHHc
Confidence 3678999999999999999998887 88988754221 1124577899999
Q ss_pred CCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|++ .+.+.+..+|+|++.||..|.++|++|.++.+||+|+|.++.... ++....
T Consensus 114 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------------------------~~d~~~ 169 (354)
T 4efi_A 114 DLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMID------------------------PTDRST 169 (354)
T ss_dssp TCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGCC------------------------TTCHHH
T ss_pred CcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCC------------------------cccccc
Confidence 993 589999999999999999999999999999999999998432110 001122
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC-----C----CCCC-----------------CCh-----
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----I----TQPH-----------------IDG----- 287 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-----~----~~~~-----------------~~~----- 287 (426)
..++||||+|+||++.+. ...+ .+...+++.. . ..|. .++
T Consensus 170 ~~lfGDGA~A~vl~~~~~-----~~~~----~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~ 240 (354)
T 4efi_A 170 SLLFGDAGTMTALETSNG-----DAAA----HFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFN 240 (354)
T ss_dssp HTTBCCEEEEEEEEECCS-----CCEE----EEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHH
T ss_pred ccccccceeEEEEeecCC-----CCce----EEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHH
Confidence 567999999999987542 1111 2222222210 0 0010 011
Q ss_pred ---HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHH
Q 014349 288 ---KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 364 (426)
Q Consensus 288 ---~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~ 364 (426)
....++++++|+++|++++|||++..|-.+.+ =...+.+.++-.. .+++ ..-..+||+.+|+=.+.|.
T Consensus 241 ~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~--ek~~--~~l~~~GNt~sasi~~~L~ 311 (354)
T 4efi_A 241 FTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLF-----MLKHLAKKAGLPA--ERVP--VNIGEYGNTSCASIPLLIT 311 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH-----HHHHHHHHTTCCG--GGSC--CCHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH-----HHHHHHHHhCcCH--HHHH--HHHhhhCcHHHHHHHHHHH
Confidence 23446788999999999999999999954433 2334444444321 1222 2346789999998777665
Q ss_pred HHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 365 FAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 365 ~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.++ +.+.+ .+.+.++..+||.|-+..+++|+-
T Consensus 312 ~~~---~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 312 TEL---KDRLK-------------------------EETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp HHS---HHHHH-------------------------HSCEEEEEEEEETTTEEEEEEEEE
T ss_pred HHH---HhCCC-------------------------CCCCEEEEEEEchhhhheeeEEEE
Confidence 543 22221 123467778999999999998874
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-15 Score=144.40 Aligned_cols=242 Identities=16% Similarity=0.155 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++++++ .|++++.... ......+.+++..+|
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~~--------------------------~~~p~~a~~v~~~lG 100 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEID-----FILVATVTPD--------------------------FNMPSVACQVQGAIG 100 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCS--------------------------CSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC--------------------------cCCCcHHHHHHHHcC
Confidence 678999999999999999988887 8888875422 111245788999999
Q ss_pred CC-CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 162 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 162 l~-gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
++ .|.+.+..+|+|++.||..|+++|++|.++.+||+|+|.++... . +..+...+
T Consensus 101 l~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------------------~-~~dr~~~~ 156 (321)
T 3il6_A 101 ATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKML-----------------------D-WTDRSTAV 156 (321)
T ss_dssp CTTCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGGGS-----------------------C-TTCTTTGG
T ss_pred CCCceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccC-----------------------C-ccccccce
Confidence 97 48999999999999999999999999999999999999843211 0 11123457
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCC------------C--CCC--------CCCChHH----HHHHH
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH------------H--ITQ--------PHIDGKG----AILAM 294 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~------------~--~~~--------~~~~~~~----~~~a~ 294 (426)
++||||+|+||++.+. + .+ .++...+++. . ... ...++.. ..+.+
T Consensus 157 lfGDGA~A~vl~~~~~----~-~i----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 227 (321)
T 3il6_A 157 LFGDGAAGVLIEAAET----P-HF----LNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDV 227 (321)
T ss_dssp GBCCEEEEEEEEEESS----C-CE----EEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHH
T ss_pred eeccccEEEEEEEcCC----C-CE----EEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHH
Confidence 8999999999997542 1 22 2222222221 0 000 0001211 12333
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 295 TRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 295 ~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
.++++++ +.++|||++.+|-.+.+ -...+.+.++-.. .+++ ..-..+||+.+|+=.+.|..+ ++.+.
T Consensus 228 ~~~i~~~-l~~~did~~v~Hq~~~~-----i~~~~~~~lgl~~--ek~~--~~l~~~GNt~sasi~~~L~~~---~~~g~ 294 (321)
T 3il6_A 228 SQNILSL-VTDETVDYLLLHQANVR-----IIDKIARKTKISR--EKFL--TNMDKYGNTSAASIPILLDEA---VENGT 294 (321)
T ss_dssp HHHHHTT-CCGGGCSEEEECCSCHH-----HHHHHHHHHTCCG--GGBC--CCGGGTCBCGGGHHHHHHHHH---HHTTS
T ss_pred HHHHHHH-cCcccCCEEEEcCCCHH-----HHHHHHHHcCcCH--HHhh--hhHhhcccHHHHHHHHHHHHH---HHhCC
Confidence 4444443 33899999999954433 2344555554322 1232 245688999999877665543 34444
Q ss_pred cCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 375 APLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 375 ~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
+.| ...+.++..+||.|-+-.+++|+
T Consensus 295 ~~~-----------------------G~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 295 LIL-----------------------GSQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp SCT-----------------------TSCCEEEEEEEETTTEEEEEEEE
T ss_pred CCC-----------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 211 01156778899999999888886
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-16 Score=152.55 Aligned_cols=247 Identities=20% Similarity=0.219 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|+++++.+. ...+..+..|...|
T Consensus 61 ~~~~la~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~--------------------------~~~P~~a~~v~~~L 109 (350)
T 4ewp_A 61 TVPVMAVGAAREALERAGLQGSDLD-----AVIVSTVTFP--------------------------HATPSAAALVAHEI 109 (350)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGCS-----EEEEECSCCS--------------------------CSSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC--------------------------CCCCchHHHHHHHh
Confidence 3578999999999999999998887 7888875422 11235677899999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++. +++.+..+|++++.||..|..+|++|..+.+||+++|.++.. +. +......
T Consensus 110 Gl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-----------~d-------------~~~~~~~ 165 (350)
T 4ewp_A 110 GATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDV-----------VD-------------PTDRSIS 165 (350)
T ss_dssp TCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------CC-------------TTCTTTG
T ss_pred CCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceec-----------cc-------------ccccccc
Confidence 9975 788999999999999999999999999999999999974211 00 1123346
Q ss_pred ceeccceEEEEecchHHHHhcCCeeeEEEEeEE--------Ee----------------cCCCCCC------CCC--CCh
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG--------MS----------------GDAHHIT------QPH--IDG 287 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~--------~~----------------~d~~~~~------~~~--~~~ 287 (426)
+++||||+|+||++.+.. .+.....+.. .. .+..... .+. .++
T Consensus 166 ~lfgDGA~A~vl~~~~~~-----~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 240 (350)
T 4ewp_A 166 FLLGDGAGAVIVAASDEP-----GISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDG 240 (350)
T ss_dssp GGBCEEEEEEEEEEESSC-----CBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECH
T ss_pred cccccchheeeeecccCC-----CccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehh
Confidence 789999999999865421 1111111110 00 0000000 000 011
Q ss_pred --------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHH
Q 014349 288 --------KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAG 359 (426)
Q Consensus 288 --------~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG 359 (426)
....++++++|+++|++++|||++.+|-.+.. =...+.+.++-.. .++ +...-..+||+.+|+=
T Consensus 241 ~~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~--~~~-~~~~l~~~GNtssasi 312 (350)
T 4ewp_A 241 PSVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMR-----IIDEFAKQLKLPE--SVV-VARDIADAGNTSAASI 312 (350)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHH-----HHHHHHHHTTCCT--TSE-ECCTHHHHCBCGGGHH
T ss_pred HHHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHH-----HHHHHHHHcCcCh--HhE-EecccccccchHHHHH
Confidence 12346789999999999999999999954433 2334444444321 111 2222346799999886
Q ss_pred HHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 360 AVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 360 ~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
.+.|..+ ++++.+ .+.+.++..+||-|=+..++||+
T Consensus 313 ~~~L~~~---~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 313 PLAMHRL---LEENPE-------------------------LSGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HHHHHHH---HHHCGG-------------------------GTTSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHH---HHhCCC-------------------------CCcCEEEEEEEchhhEeEEEEEE
Confidence 6655443 444442 12346666788876666777776
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=153.68 Aligned_cols=269 Identities=15% Similarity=0.110 Sum_probs=171.2
Q ss_pred hhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHH
Q 014349 75 DHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASG 154 (426)
Q Consensus 75 ~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 154 (426)
.....+....|+.+|+++||+++|+++.+++ .|+++++.+ + .....+.
T Consensus 95 ~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId-----~vi~~t~t~----------------------~-----~~p~~a~ 142 (393)
T 3ov2_A 95 QDIVVEEIPRLAKEAAEKAIKEWGRPKSEIT-----HLVFCSISG----------------------I-----DMPGADY 142 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSC----------------------C-----CBSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------C-----CCCCHHH
Confidence 3334456788999999999999999998887 888887532 1 1234678
Q ss_pred HHHHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCc
Q 014349 155 HVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 231 (426)
Q Consensus 155 ~i~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (426)
+|+..||+++. .+.+..+|++++.||..|.++|++|.++.|||+|+|.++..+ . ++.. +
T Consensus 143 ~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~----------~------~~~d--~ 204 (393)
T 3ov2_A 143 RLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSF----------R------GPNE--G 204 (393)
T ss_dssp HHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTC----------C------CCCT--T
T ss_pred HHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhc----------c------CCcc--c
Confidence 89999999874 689999999999999999999999999999999999853110 0 0100 0
Q ss_pred ccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEec--CCCC------------CC-CCCCC---hHHHHHH
Q 014349 232 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG--DAHH------------IT-QPHID---GKGAILA 293 (426)
Q Consensus 232 pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~--d~~~------------~~-~~~~~---~~~~~~a 293 (426)
.++.....+++||||+|+||++.+... .....+ .+...+... +... .. .+... ...+.++
T Consensus 205 ~~~~~~~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 282 (393)
T 3ov2_A 205 DFEALAGQAGFGDGAGAVVVGADPLEG-IEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRS 282 (393)
T ss_dssp CHHHHHHHHHBCCEEEEEEEESSCCTT-TCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHH
T ss_pred chhhhcccccccCccEEEEEEecCCCc-ccCcee-EEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHH
Confidence 011112467799999999998754311 011122 232222111 1100 00 01100 0112367
Q ss_pred HHHHHHHcCCCC-CCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHHH-H
Q 014349 294 MTRALKQSGLQS-HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLA-I 370 (426)
Q Consensus 294 ~~~al~~agl~~-~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l 370 (426)
++++|+++|+++ +|| ++.+|-.+.+ =..++.+.++-.. .+++.+ .+-..+||+.+|+=.+.|-.++.. +
T Consensus 283 i~~~L~~~gl~~~~di-~~v~Hq~n~~-----i~~~v~~~Lgl~~--ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~ 354 (393)
T 3ov2_A 283 LERALAPLGVREWNDV-FWVAHPGNWA-----IIDAIEAKLQLSP--DKLSTARHVFTEYGNMQSATVYFVMDELRKRSA 354 (393)
T ss_dssp HHHHHGGGTCCSGGGS-EEEECCCCHH-----HHHHHHHHHTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCc-EEEECCCChH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhh
Confidence 899999999997 888 8999943322 2344555554322 123222 235578999999987777665543 2
Q ss_pred HhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 371 HHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 371 ~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+.|.+.| ..+...++..+||-|=+..+++|++.
T Consensus 355 ~~g~~~~----------------------G~~~d~vll~~fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 355 VEGRSTT----------------------GDGLQWGVLLGFGPGLSIETVVLRSM 387 (393)
T ss_dssp HTTCSBT----------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred hcCCcCC----------------------CCCCCeEEEEEECccceeeeeeeEEc
Confidence 2243211 01125777889999999999999864
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.8e-16 Score=151.51 Aligned_cols=267 Identities=14% Similarity=0.105 Sum_probs=164.2
Q ss_pred hhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHH
Q 014349 74 KDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMAS 153 (426)
Q Consensus 74 ~~~~~~~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (426)
+....++....|+.+|+++||+++|+++++++ .|++++..+ + .....+
T Consensus 88 r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId-----~li~~t~t~----------------------~-----~~p~~a 135 (387)
T 3oit_A 88 RLDIAADAVPELAAEAAKKAIAEWGRPAADIT-----HLVVTTNSG----------------------A-----HVPGVD 135 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSC----------------------C-----EESCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC----------------------C-----CcccHH
Confidence 33344457789999999999999999998887 888887432 1 123467
Q ss_pred HHHHHHcCCCCC---eeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCC
Q 014349 154 GHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 230 (426)
Q Consensus 154 ~~i~~~lgl~gp---~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (426)
.+|+..||+++. .+.+..+|++++.||..|.++|++|.++.+||+|+|.++..+ . ++..
T Consensus 136 ~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~-----------~-----~~~d-- 197 (387)
T 3oit_A 136 FRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYF-----------T-----GPDE-- 197 (387)
T ss_dssp HHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTC-----------C-----CCCS--
T ss_pred HHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchhc-----------c-----Cccc--
Confidence 889999999873 689999999999999999999999999999999999843110 0 0100
Q ss_pred cccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCC--CC-----CC--------CCCCC---hHHHHH
Q 014349 231 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDA--HH-----IT--------QPHID---GKGAIL 292 (426)
Q Consensus 231 ~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~--~~-----~~--------~~~~~---~~~~~~ 292 (426)
+.++.....+++||||+|+||++.+. ....+...+.+.+..... .. .. .+... ...+..
T Consensus 198 ~~~~~~~~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 274 (387)
T 3oit_A 198 GCFRTLLVQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVER 274 (387)
T ss_dssp SSCHHHHHHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHH
T ss_pred cchHhhhcccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHH
Confidence 01111123678999999999987541 111222344443322111 00 00 01100 123456
Q ss_pred HHHHHHHHc----CCCCCCcc--EEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHH
Q 014349 293 AMTRALKQS----GLQSHQVD--YVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIF 365 (426)
Q Consensus 293 a~~~al~~a----gl~~~dId--~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~ 365 (426)
+++++|+++ |++ |+| ++.+|-.+.. =..++.+.++-.. .++..+ .+-..+||+.+|+=.+.|-.
T Consensus 275 ~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~n~~-----il~~v~~~Lgl~~--ek~~~s~~~l~~~GNtssAsip~~L~~ 345 (387)
T 3oit_A 275 CLLDMFGPLLGGDGGG--GWNDLFWAVHPGSST-----IMDQVDAALGLEP--GKLAASRRVLSDYGNMSGATVIFALDE 345 (387)
T ss_dssp HHHHHTGGGCC--------GGGSEEEECCCCHH-----HHHHHHHHHTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHhhcccCCCC--cccccEEEECCCCHH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCchHHhHHHHHHHH
Confidence 788888888 887 666 9999944333 2344444454322 123222 23457899999986666554
Q ss_pred HHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 366 AVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 366 ~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
+ +++.+.+ ... ..+...++..+||-|-+..+++|+++
T Consensus 346 ~----~~~~~~~------------------G~~-g~~~d~vll~~fG~G~t~~~~ll~~~ 382 (387)
T 3oit_A 346 L----RRQRKEA------------------AAA-GEWPELGVMMAFGPGMTVDAMLLHAT 382 (387)
T ss_dssp H----HHC-----------------------------CCEEEEEEEETTTEEEEEEEEEC
T ss_pred H----HHhhhcc------------------CCC-CCCCCEEEEEEecccceeeeeeeEec
Confidence 3 2222211 000 01125677889999999999999874
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.9e-16 Score=153.17 Aligned_cols=181 Identities=14% Similarity=0.132 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++.+++ .|++++..+. ......+..|+..|
T Consensus 51 ~~~~La~~Aa~~aL~~agi~~~~Id-----~li~~t~t~~--------------------------~~~p~~a~~v~~~l 99 (450)
T 2f82_A 51 DVISMSFNAVTSLLEKYKIDPKQIG-----RLEVGSETVI--------------------------DKSKSIKTFLMQLF 99 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECCCCS--------------------------CSSSCHHHHHTHHH
T ss_pred CHHHHHHHHHHHHHHHcCcCHHHCC-----EEEEEecCCC--------------------------CCCCcHHHHHHHHh
Confidence 3578999999999999999776664 5666764321 11235677888888
Q ss_pred CC---C-CCeeeccCCcchHHHHHHHHHHHHHcCCC--CEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccc
Q 014349 161 GF---Q-GPNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 234 (426)
Q Consensus 161 gl---~-gp~~~v~~acas~~~Al~~A~~~I~~G~~--d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~ 234 (426)
|+ . .+++.+..+|+|++.||..|.++|++|.+ +.+||+|+|.+. ++
T Consensus 100 gl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----------------------------~~ 151 (450)
T 2f82_A 100 EKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----------------------------YA 151 (450)
T ss_dssp HTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----------------------------CS
T ss_pred CCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----------------------------cc
Confidence 88 3 48899999999999999999999999998 999999999742 11
Q ss_pred cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCC-------CCCChH--------HHHHHHHHHHH
Q 014349 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQ-------PHIDGK--------GAILAMTRALK 299 (426)
Q Consensus 235 ~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~-------~~~~~~--------~~~~a~~~al~ 299 (426)
......++||||+|+||++.+. . .+.....|.... +..+... |..++. .+..+++++++
T Consensus 152 ~~~~~~~fGDGA~A~ll~~~~~----~-~~~~~~~g~~~~-~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~ 225 (450)
T 2f82_A 152 EGPARPTGGAAAIAMLIGPDAP----I-VFESKLRGSHMA-HVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCN 225 (450)
T ss_dssp SSTTGGGCEEEEEEEEEESSCS----E-EEEEEEEEEEEC-CCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccceEEEEeccCCc----e-EEEeccceeehh-hccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHH
Confidence 1235678999999999986532 1 111112333222 1111111 222332 24467778886
Q ss_pred ------HcCCCCCCccEEEecCCCCCCCCHHHH
Q 014349 300 ------QSGLQSHQVDYVNAHATSTPLGDTVEA 326 (426)
Q Consensus 300 ------~agl~~~dId~v~~hgtgt~~~D~~E~ 326 (426)
++|++++|||++..|.++++..+.+..
T Consensus 226 ~~~~~~~agl~~~did~~v~Hq~~~~i~~~~~~ 258 (450)
T 2f82_A 226 KFEKLEGKEFSINDADYFVFHSPYNKLVQKSFA 258 (450)
T ss_dssp HHHHHHSSCCCGGGCSEEEECCSSHHHHHHHHH
T ss_pred HhhhccccCCChhhcCEEEecCChHHHHHHHHH
Confidence 899999999999999998887666543
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=143.51 Aligned_cols=263 Identities=11% Similarity=0.040 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++.+++ .|+++++. + ...+..+.+|+..||
T Consensus 110 a~~La~~Aa~~AL~~agi~~~dId-----~li~~t~t-~--------------------------~~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLVPAQIT-----HMVSTTCT-D--------------------------SANPGYDHYVAKELG 157 (465)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSS-C--------------------------CCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeC-C--------------------------CCCCcHHHHHHHHhC
Confidence 358999999999999999998887 88888753 1 112345778999999
Q ss_pred CCC-C-eeec-cCCcchHHHHHHHHHHHHHc----CCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccc
Q 014349 162 FQG-P-NHAA-VTACATGAHSIGDAARMIQF----GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 234 (426)
Q Consensus 162 l~g-p-~~~v-~~acas~~~Al~~A~~~I~~----G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~ 234 (426)
++. + .+.| ..+|++++.||..|.++|++ |.++.|||+++|.++..... ....... ..+
T Consensus 158 l~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~-~~~~~~~--------------~~~ 222 (465)
T 3e1h_A 158 LSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESIDA--------------LQE 222 (465)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHH-HHHHHHH--------------HTC
T ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCc-ccccccc--------------ccc
Confidence 986 4 5888 79999999999999999997 99999999999985433321 1110000 011
Q ss_pred cCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCC---------------CCCC---ChHHHHHHHHH
Q 014349 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT---------------QPHI---DGKGAILAMTR 296 (426)
Q Consensus 235 ~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~---------------~~~~---~~~~~~~a~~~ 296 (426)
.....+++||||+|+||++.+... .....+..+.++.......... .+.. -...+..++++
T Consensus 223 d~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~ 301 (465)
T 3e1h_A 223 TRIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYAD 301 (465)
T ss_dssp CCCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred ccccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHH
Confidence 223467799999999998753211 0112223455543322111100 0000 01334567788
Q ss_pred HHHH-------cCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHH
Q 014349 297 ALKQ-------SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVL 368 (426)
Q Consensus 297 al~~-------agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~ 368 (426)
+|++ +|++++||||+ +|--+.. =..++.+.++-.. .+++.+ ..-..+||+.+|+=.+.|-.+
T Consensus 302 ~L~~~g~~L~~agl~~~DId~~-~Hqan~r-----Il~~v~~~Lgl~~--ek~~~s~~~l~~yGNtsSASip~aL~~~-- 371 (465)
T 3e1h_A 302 LLSSLQDQLPSSYQKPADFDWA-MHPGGAT-----ILSGAESAMGLTP--EHMRASYDRYINHGNSSSATIFSVLNRL-- 371 (465)
T ss_dssp HHHHHGGGSCTTSCSGGGSEEE-ECCSSHH-----HHHHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHHHH--
T ss_pred HHHhccccccccCCCHHHceEE-ecCCChH-----HHHHHHHHhCcCH--HHhHHHHHHHhcceechHhHHHHHHHHH--
Confidence 8887 67999999998 9943322 2344444454321 112111 112356999988855544432
Q ss_pred HHHh--CCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 369 AIHH--GVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 369 ~l~~--~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
++. +.+.+ . ......++..+||-|=+..+++|+.
T Consensus 372 -~~~~~g~l~~------------------G---g~~~d~vll~gfG~Glt~~~~llr~ 407 (465)
T 3e1h_A 372 -REKDMDALAP------------------G---GKVKEYVVGCAFGPGINVEMCMLKR 407 (465)
T ss_dssp -TSTTTTSCSS------------------S---SCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred -HHhcccccCC------------------C---CCCCCEEEEEEEhHHHhhhheeeEE
Confidence 222 22211 0 0123577778999887888888875
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.4e-14 Score=137.46 Aligned_cols=243 Identities=16% Similarity=0.044 Sum_probs=159.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
.....|+.+|+++||+++|+++++++ .|+++++.+ + .....+.+|+..
T Consensus 135 ~~~~~La~~Aa~~AL~~agi~~~dId-----~li~~t~t~----------------------~-----~~P~~a~~v~~~ 182 (413)
T 3v7i_A 135 EAVQAYGERAARGALQIAGLDVADVD-----CLITSNSTT----------------------P-----ALPGLDVALANR 182 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECCSS----------------------C-----CSSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhCcCHHHCC-----EEEEEccCC----------------------C-----CcCHHHHHHHHH
Confidence 35678999999999999999998887 889887542 1 112456789999
Q ss_pred cCCCC--Ceeec-cCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccC
Q 014349 160 YGFQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 236 (426)
Q Consensus 160 lgl~g--p~~~v-~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~ 236 (426)
+|++. +.+.+ ..+|+|++.||..|.++|++|.++.|||+|+|.++... .+ +.+
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-----------------------~~-~d~ 238 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-----------------------QP-ADD 238 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-----------------------CS-SCC
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-----------------------Cc-ccc
Confidence 99986 45667 99999999999999999999999999999999843211 11 111
Q ss_pred CC-----cceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCC--CC-----------CCCCC----hHHHHHHH
Q 014349 237 RD-----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--IT-----------QPHID----GKGAILAM 294 (426)
Q Consensus 237 ~~-----G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~--~~-----------~~~~~----~~~~~~a~ 294 (426)
.. ..++||||+|+||++.+.. . +..++.+......... .. ..+.. -..+..++
T Consensus 239 ~~~~lv~~~LFGDGAaAvvl~~~~~~----~-~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i 313 (413)
T 3v7i_A 239 TLESLIVRLLFADTAVAAVVTGRPRP----E-SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAM 313 (413)
T ss_dssp STTHHHHHHHBCCEEEEEEEESSCCT----T-EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred chhhhhcceeeccccEEEEEEecCCC----C-CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHH
Confidence 11 5679999999999875421 1 1224444432211110 00 00000 12245678
Q ss_pred HHHHH------HcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhh--cccCCCccee-cccccccchhHHhHHHHHHHH
Q 014349 295 TRALK------QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS--DHATSGSLAF-SSTKGAIGHLLGAAGAVEAIF 365 (426)
Q Consensus 295 ~~al~------~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~--~~~~~~~~~v-~s~k~~~Gh~~~AsG~~~l~~ 365 (426)
+++|+ ++|++ ||++.+|-.+.. =..++.+.++ -.. .++.. ..+-. +||+.+|+=.+.|-.
T Consensus 314 ~~~L~~~~~~~~~gl~---id~~v~Hq~~~~-----il~~v~~~Lg~~l~~--ek~~~s~~~l~-~GNtssAsi~~~L~~ 382 (413)
T 3v7i_A 314 WEWLRVRYEDDPSSWH---PDVLLAHPGGTR-----VLEYMEQTMPDEWPS--GLLSYSRDSYT-SGNRGGAAVFDILRR 382 (413)
T ss_dssp HHHHHHHTSSSCTTCC---CCEEEEECSSHH-----HHHHHHHHSCSSCCS--CSTHHHHHHHT-TCBCGGGHHHHHHHH
T ss_pred HHHHhhccccccCCCc---eeEEEECCCChH-----HHHHHHHHhCCCCCH--HHhhccceEec-eeChHHHHHHHHHHH
Confidence 88999 89987 999999954432 2344555555 221 12211 22344 899999986666655
Q ss_pred HHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 366 AVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 366 ~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
++ + +.+ .+...++..+||-|=+..+++|+
T Consensus 383 ~~---~-~~~-------------------------~~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 383 AH---D-AGQ-------------------------KTGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp HH---H-HCC-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HH---h-CCC-------------------------CCCCEEEEEEECHHHhHhhhheE
Confidence 43 2 221 11246777799987777777775
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.59 E-value=8.1e-14 Score=129.89 Aligned_cols=189 Identities=17% Similarity=0.149 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||++||+++++++ .|++|+.. |.. ..+..++..+
T Consensus 54 a~sdLa~~Aa~~AL~~AGi~~~DID-----~II~gt~t----------------------~q~-------~~A~~va~~L 99 (347)
T 3lma_A 54 AERKLMEDAVQSALSKQNLKKEDID-----IFLAGDLL----------------------NQN-------VTANYVARHL 99 (347)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCS-----EEEEEESS----------------------SSS-------TTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCC----------------------Cch-------hHHHHHHHHh
Confidence 3467999999999999999999998 88888743 111 1344566666
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
++ |.+.|.++|+|++.||..|..+|++|.++.|||+|+|.+........+. . ..+..+|. .--
T Consensus 100 gi--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p-----~------e~g~q~p~----ta~ 162 (347)
T 3lma_A 100 KI--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYP-----T------EYGGQKPG----TAT 162 (347)
T ss_dssp CC--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC------------------------------
T ss_pred CC--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCc-----c------hhcccCCc----hhc
Confidence 54 8999999999999999999999999999999999999865332100000 0 00111121 122
Q ss_pred eeccceEEEEecchHHHHhcCCeeeEEEEeEEEe--cCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEec
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--GDAHHITQPHIDG----KGAILAMTRALKQSGLQSHQVDYVNAH 314 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~--~d~~~~~~~~~~~----~~~~~a~~~al~~agl~~~dId~v~~h 314 (426)
..++||+|+||++.. ..+ +|.+.... .| .....|...+ ....+++++.|+++|++|+|+|+|..+
T Consensus 163 ~t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg 233 (347)
T 3lma_A 163 STVTGSGAVVLSQQP------GGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG 233 (347)
T ss_dssp -CCCEEEEEEEESSC------CSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred EEccceeEEEEEecC------CCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC
Confidence 346899999998643 222 33433221 11 2233343323 234467899999999999999999964
Q ss_pred CCCCCCCCHHHHH--HHHHHhhcc
Q 014349 315 ATSTPLGDTVEAT--AIRTVFSDH 336 (426)
Q Consensus 315 gtgt~~~D~~E~~--a~~~~~~~~ 336 (426)
|.-++. .+.+++...
T Consensus 234 -------dL~q~g~~il~~l~~~~ 250 (347)
T 3lma_A 234 -------DLSGVGSPILKDLLKEE 250 (347)
T ss_dssp -------SCHHHHHHHHHHHHHHT
T ss_pred -------ChHHHHHHHHHHHHHHc
Confidence 322554 377777654
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.8e-14 Score=138.18 Aligned_cols=216 Identities=14% Similarity=0.108 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++| +++++ .|++++..+. ......+..|+..|
T Consensus 55 ~~~~La~~Aa~~aL~~a~--~~~Id-----~li~~t~t~~--------------------------~~~ps~a~~v~~~L 101 (388)
T 3v4n_A 55 DIVTFAANAAEAILTKED--KEAID-----MVIVGTESSI--------------------------DESKAAAVVLHRLM 101 (388)
T ss_dssp CHHHHHHHHHHTTCCHHH--HHHEE-----EEEEECSSCS--------------------------BSSSCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhCC--cccCC-----EEEEEeccCC--------------------------CcCccHHHHHHHHc
Confidence 357899999999999997 55665 6777774322 11224577899999
Q ss_pred CCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|+++ +++.+..+|++++.||..|..+|++|.++.+||+|+|.+... ++ ..+
T Consensus 102 Gl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~--------------------------~~-~~~ 154 (388)
T 3v4n_A 102 GIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYG--------------------------LN-SGG 154 (388)
T ss_dssp TCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCC--------------------------TT-CTT
T ss_pred CCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhccc--------------------------CC-CCC
Confidence 9975 788999999999999999999999999999999999974321 11 122
Q ss_pred cceeccceEEEEecchHHHHhcCCeeeEEEEe-EEEecCCCCCCCCC------CCh--------HHHHHHHHHHHHHcCC
Q 014349 239 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG-YGMSGDAHHITQPH------IDG--------KGAILAMTRALKQSGL 303 (426)
Q Consensus 239 G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g-~~~~~d~~~~~~~~------~~~--------~~~~~a~~~al~~agl 303 (426)
..++||||+|+||++.+ .++..... .+...+......|. .++ ..+..+++++|+++|+
T Consensus 155 ~~lfGDGA~A~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~ 227 (388)
T 3v4n_A 155 EPTQGAGAVAMLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGL 227 (388)
T ss_dssp GGGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCccccceeEEEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCC
Confidence 47799999999998742 12111111 11111211111111 112 3345678899999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHH-------HHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHH
Q 014349 304 QSHQVDYVNAHATSTPLGDTVEA-------TAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 367 (426)
Q Consensus 304 ~~~dId~v~~hgtgt~~~D~~E~-------~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~ 367 (426)
+++|||++..|-..++..-..-. ..+.+-++... .+ ....-..+||+.+||=.+.|..++
T Consensus 228 ~~~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~--e~--~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 228 DFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARY--EE--SIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp CGGGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHH--HH--HTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred CHHHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCCCH--HH--HhhHHHhcCchHHHHHHHHHHHHH
Confidence 99999999999533221000000 11122222110 01 123445789999998776665543
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-13 Score=135.18 Aligned_cols=177 Identities=12% Similarity=0.146 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++..+.. .....+..|...|
T Consensus 72 ~~~~La~~Aa~~aL~~agi~~~dId-----~li~~T~t~~~--------------------------~~ps~a~~v~~~L 120 (478)
T 2p8u_A 72 DINSLCMTVVQNLMERNNLSYDCIG-----RLEVGTETIID--------------------------KSKSVKTNLMQLF 120 (478)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECSCCSC--------------------------SSSCHHHHHGGGT
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCcc--------------------------cCccHHHHHHHHH
Confidence 3578999999999999999877665 67777643221 1224556777555
Q ss_pred C---CCC-CeeeccCCcchHHHHHHHHHHHHHcCC--CCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccc
Q 014349 161 G---FQG-PNHAAVTACATGAHSIGDAARMIQFGD--SDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 234 (426)
Q Consensus 161 g---l~g-p~~~v~~acas~~~Al~~A~~~I~~G~--~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~ 234 (426)
+ +.. +++.+.++|++++.||..|..+|++|. .+.|||+++|.. . |.
T Consensus 121 ~~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----------------~------------~~ 172 (478)
T 2p8u_A 121 EESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----------------V------------YA 172 (478)
T ss_dssp TTTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------C------------CC
T ss_pred hhcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----------------c------------cc
Confidence 4 443 778899999999999999999999999 999999999941 0 11
Q ss_pred cCCCcceeccceEEEEecchHHHHhcCCeeeEE-EEeEEEecCCCCCCCC-------CCChHH--------H---HHHHH
Q 014349 235 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAE-VRGYGMSGDAHHITQP-------HIDGKG--------A---ILAMT 295 (426)
Q Consensus 235 ~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~-i~g~~~~~d~~~~~~~-------~~~~~~--------~---~~a~~ 295 (426)
......+.||||+|+||++.+. .++.. +.|. ...+......| ..++.. . ...++
T Consensus 173 ~~~~~~~fGdGA~A~Ll~~~~~------~~l~~~~~gs-~~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~ 245 (478)
T 2p8u_A 173 TGNARPTGGVGAVALLIGPNAP------LIFERGLRGT-HMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYC 245 (478)
T ss_dssp SSTTGGGCEEEEEEEEEESSCS------EEECTTCCEE-EECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccceeEEEEEecCCC------ceEeecccee-cccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHH
Confidence 1223567999999999986421 01000 0111 11122221112 112211 1 13455
Q ss_pred HHHH--------HcCCCCCCccEEEecCCCCCCCCH
Q 014349 296 RALK--------QSGLQSHQVDYVNAHATSTPLGDT 323 (426)
Q Consensus 296 ~al~--------~agl~~~dId~v~~hgtgt~~~D~ 323 (426)
+.++ ++|++++|||++..|-.+.+..+.
T Consensus 246 ~~l~~~~~~~~~~~g~~~~did~~v~H~~~~ki~~~ 281 (478)
T 2p8u_A 246 KKIHAQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQK 281 (478)
T ss_dssp HHHHHHHHHHTCCCCCCGGGCSEEEECCSSHHHHHH
T ss_pred HHHhhhccccccccCCChHHcCEEEecCCcHHHHHH
Confidence 6666 679999999999999776665444
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.6e-10 Score=114.56 Aligned_cols=114 Identities=12% Similarity=0.087 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|++.|+++||+++|+++++++ -|+++|..+. ......+..|...||
T Consensus 54 ~~~ma~~Aa~~al~~a~i~~~~Id-----~ii~aT~t~~--------------------------~~~ps~a~~v~~~l~ 102 (460)
T 2wya_A 54 INSLCLTVVQRLMERIQLPWDSVG-----RLEVGTETII--------------------------DKSKAVKTVLMELFQ 102 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE-----EEEEECSCCS--------------------------CSSSCHHHHHGGGTG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC--------------------------CCCCchHHHHHHHHh
Confidence 567999999999999999877665 6778874422 112345667888887
Q ss_pred CCC----CeeeccCCcchHHHHHHHHHHHHHcCCCCEE--EEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCccccc
Q 014349 162 FQG----PNHAAVTACATGAHSIGDAARMIQFGDSDVM--VAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 235 (426)
Q Consensus 162 l~g----p~~~v~~acas~~~Al~~A~~~I~~G~~d~v--lv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~ 235 (426)
+.| +++.+..+|++++.||..|..+|++|..+.+ |++..+. .. |..
T Consensus 103 ~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~-~~---------------------------~~d 154 (460)
T 2wya_A 103 DSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI-AV---------------------------YPS 154 (460)
T ss_dssp GGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE-EC---------------------------CCS
T ss_pred ccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccc-cc---------------------------ccc
Confidence 654 4577999999999999999999999987644 3333332 00 112
Q ss_pred CCCcceeccceEEEEecch
Q 014349 236 GRDGFVIGEGSGVLVLEEL 254 (426)
Q Consensus 236 ~~~G~~~geGa~alvL~~~ 254 (426)
.......|+||+|++++..
T Consensus 155 ~~~~~~~GdGA~A~l~~~~ 173 (460)
T 2wya_A 155 GNARPTGGAGAVAMLIGPK 173 (460)
T ss_dssp STTGGGCEEEEEEEEEESS
T ss_pred ccccccCcchHHhhhcccC
Confidence 2334567999999999864
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=82.79 E-value=5.9 Score=37.63 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=57.7
Q ss_pred EEEEeEEEecCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-CHHHHHHHHHHhhcccCCCcc
Q 014349 266 AEVRGYGMSGDAHH-ITQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 266 a~i~g~~~~~d~~~-~~~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~ 342 (426)
+.|.|.+...-+.. ...++.. ..-..+++++||+++|++++|||.+.+- +.++.. .+.-...+...++... ..
T Consensus 9 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g-~~~~~~~~~~~a~~v~~~lGl~~---~~ 84 (396)
T 4dd5_A 9 VVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLG-GVLTAGLGQNIARQIALGAGIPV---EK 84 (396)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CSCCTTSCSCHHHHHHHHTTCCT---TS
T ss_pred EEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eecCCCCCchHHHHHHHHcCCCC---Cc
Confidence 46777665433322 1122222 2345789999999999999999998763 333221 1222333334343210 12
Q ss_pred eecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 343 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 343 ~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
|...+ +..+++++..+..+...++.|.
T Consensus 85 p~~~v-----~~aCss~~~al~~A~~~I~~G~ 111 (396)
T 4dd5_A 85 PAMTI-----NIVCGSGLRSVSMASQLIALGD 111 (396)
T ss_dssp CEEEE-----CCGGGHHHHHHHHHHHHHHHTS
T ss_pred eEEEe-----ccccHHHHHHHHHHHHHHhcCC
Confidence 22211 3457788899999999998875
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=81.92 E-value=6.4 Score=37.38 Aligned_cols=100 Identities=15% Similarity=0.043 Sum_probs=57.4
Q ss_pred EEEEeEEEecCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-CHHHHHHHHHHhhcccCCCcc
Q 014349 266 AEVRGYGMSGDAHH-ITQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 266 a~i~g~~~~~d~~~-~~~~~~~-~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~-D~~E~~a~~~~~~~~~~~~~~ 342 (426)
+.|.|.+...-+.. ...++.. ..-..+++++||+++|++++|||.+.+ |+.++.. ...-...+...++... ..
T Consensus 7 v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~-g~~~~~~~~~~~a~~~~~~lGl~~---~~ 82 (395)
T 4e1l_A 7 VVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVII-GNVLQTGLGQNVARQIAINAGIPN---SV 82 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECCCCSSTTCCHHHHHHHHTTCCT---TS
T ss_pred EEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCcchHHHHHHHHcCCCC---Cc
Confidence 45677665433322 1112222 244578999999999999999998776 3333221 1112223333333210 12
Q ss_pred eecccccccchhHHhHHHHHHHHHHHHHHhCC
Q 014349 343 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGV 374 (426)
Q Consensus 343 ~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 374 (426)
|. ..=+..+++++..+..+..+++.|.
T Consensus 83 p~-----~~v~~~Css~~~al~~A~~~I~~G~ 109 (395)
T 4e1l_A 83 PS-----YTVNKLCGSGLKSVQLAAQSITSGE 109 (395)
T ss_dssp CE-----EEECCGGGHHHHHHHHHHHHHHTTS
T ss_pred eE-----EEccccchHHHHHHHHHHHHHhCCC
Confidence 22 1224567888999999999998876
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=80.77 E-value=3 Score=40.00 Aligned_cols=78 Identities=17% Similarity=0.031 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHH
Q 014349 289 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 368 (426)
Q Consensus 289 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~ 368 (426)
-..+|+++||+++|++++|||.+.+ +|.|+..-+.-...+...++... .++ .-.+.....++|+..+..+..
T Consensus 140 La~~Aa~~AL~~agi~~~dId~li~-~t~t~~~~P~~a~~v~~~LGl~~---~~~----~~~v~~~~Cagg~~AL~~A~~ 211 (413)
T 3v7i_A 140 YGERAARGALQIAGLDVADVDCLIT-SNSTTPALPGLDVALANRLPLRG---DTM----LLPATQWACVAGTRSLALAAD 211 (413)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEE-ECCSSCCSSCHHHHHHHHTTCCT---TCE----EEEESSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHCCEEEE-EccCCCCcCHHHHHHHHHhCCCC---Cce----EEEeeCCccHHHHHHHHHHHH
Confidence 3468899999999999999999765 34444222222223334343221 111 011225567778888888888
Q ss_pred HHHhCC
Q 014349 369 AIHHGV 374 (426)
Q Consensus 369 ~l~~~~ 374 (426)
.++.|.
T Consensus 212 ~i~ag~ 217 (413)
T 3v7i_A 212 LVAADP 217 (413)
T ss_dssp HHHHCT
T ss_pred HHhcCC
Confidence 888764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 426 | ||||
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 5e-60 | |
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 6e-57 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 1e-52 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 1e-50 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 3e-45 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 5e-44 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 8e-43 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 8e-42 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 7e-41 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 1e-38 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 8e-38 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 8e-35 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 1e-34 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 5e-33 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 4e-24 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 3e-21 |
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 194 bits (494), Expect = 5e-60
Identities = 203/264 (76%), Positives = 233/264 (88%), Gaps = 3/264 (1%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
MVTPLG G ETTWRRLI GECGIR +T +DLKM +FD ET+L+ F QL+SKVAA VP G
Sbjct: 10 MVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGS 69
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ GEF+E W + +++A FI YA+CAADEAL DA+WLP+++ +KERTGVSIGGGIGS
Sbjct: 70 NPGEFDEALW---LNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGS 126
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
I D V+AAQ+ICEKRLRRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSI
Sbjct: 127 ICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSI 186
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGF
Sbjct: 187 GDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGF 246
Query: 241 VIGEGSGVLVLEELEHAKKRGAKI 264
VIGEGSGV+VLEE EHAK+RGAKI
Sbjct: 247 VIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 185 bits (471), Expect = 6e-57
Identities = 113/262 (43%), Positives = 159/262 (60%), Gaps = 23/262 (8%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+TP+G G E + + G+ G+R IT D L ++AA V
Sbjct: 11 ALTPIGVGQEAFHKAQLAGKSGVRPITRFDA--------------SALPVRIAAEVDV-- 54
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ ++L+ K+ R + RF+ YAL AA AL DA P D ER G +G GIG
Sbjct: 55 -----DPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDL-DPERVGTLVGTGIGG 108
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ +++ E+ R+SPFFIP ++ NMAS H++M+YGF GP+ VTACATGA ++
Sbjct: 109 METWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADAL 168
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G A RMIQ G++D+++AGGTE++I +++ F RAL+T+ N P++ASRPF RDGF
Sbjct: 169 GSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASRPFTLSRDGF 227
Query: 241 VIGEGSGVLVLEELEHAKKRGA 262
V+GEG+GVLVLE EHAKKRGA
Sbjct: 228 VMGEGAGVLVLEAYEHAKKRGA 249
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 174 bits (442), Expect = 1e-52
Identities = 101/262 (38%), Positives = 149/262 (56%), Gaps = 22/262 (8%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
M++P+G E+TW+ L+ G+ GI I D A
Sbjct: 11 MLSPVGNTVESTWKALLAGQSGISLIDHFDTS--------------------AYATKFAG 50
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+FN + ++ K+ R + FI Y + A +A+ D L + R G +IG GIG
Sbjct: 51 LVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQD-SGLEITEENATRIGAAIGSGIGG 109
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ + + R++SPFF+P ++NM +GH+++ YG +GP+ + TA +G H+I
Sbjct: 110 LGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNI 169
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
G AAR+I +GD+DVMVAGG E + L + GF +RAL+T+ N PQ ASRP+D RDGF
Sbjct: 170 GHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGF 228
Query: 241 VIGEGSGVLVLEELEHAKKRGA 262
V+G+G+G+LVLEE EHAKKRGA
Sbjct: 229 VLGDGAGMLVLEEYEHAKKRGA 250
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 166 bits (420), Expect = 1e-50
Identities = 125/160 (78%), Positives = 141/160 (88%)
Query: 265 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV 324
YAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+QSGL +Q+DYVNAHATSTP+GD V
Sbjct: 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAV 60
Query: 325 EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 384
EA AI+TVFS+HATSG+LAFSSTKGA GHLLGAAGAVEAIF++LAIHHGVAP+TLN+ P
Sbjct: 61 EARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 120
Query: 385 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424
DPIF+ FMPLT SK M + A+SNSFGFGGTNASLLF
Sbjct: 121 DPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 153 bits (388), Expect = 3e-45
Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 3/200 (1%)
Query: 225 TPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPH 284
P+ ASRPFD RDGFV+ EG+ + VLE+ + A RGA+I+AE+ GY +A+H+T
Sbjct: 2 DPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLK 61
Query: 285 IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 344
DG+ + AL +S + +DY+NAH + T D E A + +HA
Sbjct: 62 ADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHA--RRTPV 119
Query: 345 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 404
SS K +GH LGA G++E VLA+ HGV P T NL DP + +++PL A ++ +
Sbjct: 120 SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEA-RERKLR 178
Query: 405 AALSNSFGFGGTNASLLFTK 424
+ L+ GFGG ++++
Sbjct: 179 SVLTVGSGFGGFQSAMVLRD 198
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 152 bits (384), Expect = 5e-44
Identities = 103/262 (39%), Positives = 141/262 (53%), Gaps = 23/262 (8%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+ +P+G E W L G+ GI IT D +FD V
Sbjct: 18 VTSPIGNTPEEFWNSLATGKIGIGGITKFD--HSDFD------------------VHNAA 57
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+F D + KD + YAL AA EA++ A L + ++R GV + GIG
Sbjct: 58 EIQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHA-NLDVEALNRDRFGVIVASGIGG 116
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
I + D + EK +R+ P +P+ L NMASG+V+M++G G + TAC++ +I
Sbjct: 117 IKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAI 176
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA R I+FG DVM+ GGTE+SI ++AGF AL+T P AS PFD R+GF
Sbjct: 177 GDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGF 234
Query: 241 VIGEGSGVLVLEELEHAKKRGA 262
V+GEGSG+LVLE LEHA+KRGA
Sbjct: 235 VMGEGSGMLVLESLEHAEKRGA 256
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 148 bits (375), Expect = 8e-43
Identities = 79/265 (29%), Positives = 120/265 (45%), Gaps = 23/265 (8%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V+ +G + L G GI + S V V
Sbjct: 11 IVSSIGNNQQEVLASLREGRSGITFSQELKDS--------------GMRSHVWGNVKL-- 54
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ ++ K R ++ YA + ++A+ DA P R G+ G G GS
Sbjct: 55 -----DTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGS 109
Query: 121 ISDTVDAAQMIC-EKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHS 179
V A + + L+ + P+ + + + + S ++ + G N++ +ACAT AH
Sbjct: 110 PRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHC 169
Query: 180 IGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239
IG+A IQ G D++ AGG E + F AL+TKYN TP++ASR +D RDG
Sbjct: 170 IGNAVEQIQLGKQDIVFAGGGEE-LCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDG 228
Query: 240 FVIGEGSGVLVLEELEHAKKRGAKI 264
FVI G G++V+EELEHA RGA I
Sbjct: 229 FVIAGGGGMVVVEELEHALARGAHI 253
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 146 bits (368), Expect = 8e-42
Identities = 103/262 (39%), Positives = 149/262 (56%), Gaps = 22/262 (8%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+TP+G + W+ L+ G GI IT D + V
Sbjct: 11 AITPIGNTLQDYWQGLMEGRNGIGPITRFDA--------------SDQACRFGGEVKD-- 54
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
F+ +L+ K+ + + RF +A+CA+ +A++DAK + ++ + GV IG GIG
Sbjct: 55 ----FDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKLVINEL-NADEIGVLIGTGIGG 109
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
+ D ++ +K R SPF IP ++ NMASG ++ G +GPN+ VTACA G+++I
Sbjct: 110 LKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAI 169
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240
GDA R++Q G + M+ GGTE++I LS AGF +RAL+ N P ASRPFD RDGF
Sbjct: 170 GDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSF-RNDDPLHASRPFDKDRDGF 228
Query: 241 VIGEGSGVLVLEELEHAKKRGA 262
V+GEGSG+L+LEELE A RGA
Sbjct: 229 VMGEGSGILILEELESALARGA 250
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 141 bits (355), Expect = 7e-41
Identities = 82/162 (50%), Positives = 111/162 (68%), Gaps = 2/162 (1%)
Query: 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD 322
KIYAE+ G+GMS DA+H+T P +G GA LAM AL+ +G+++ Q+ YVNAH TSTP GD
Sbjct: 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGD 60
Query: 323 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 382
EA A++T+F + A+ + SSTK GHLLGAAGAVE+I+++LA+ P T+NL
Sbjct: 61 KAEAQAVKTIFGEAASRVLV--SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLD 118
Query: 383 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424
PD + +F+P A + + L NSFGFGGTN SL+F K
Sbjct: 119 NPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 134 bits (339), Expect = 1e-38
Identities = 77/162 (47%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD 322
KIY E+ GY M+ DA+HIT P DG+GA A+ ALK SGL+ V Y+NAH TSTP D
Sbjct: 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPAND 60
Query: 323 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 382
E AI+ +HA ++A SSTK GHLLG +G +EA+ V+AI P T+NL
Sbjct: 61 VTETRAIKQALGNHAY--NIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLE 118
Query: 383 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424
PDP + +++P + + + + ALSNSFGFGG N +L F K
Sbjct: 119 NPDPECDLDYVPGQS-RALIVDVALSNSFGFGGHNVTLAFKK 159
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 132 bits (333), Expect = 8e-38
Identities = 93/162 (57%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD 322
+IYAE+ G+G S DAHHIT+PH +GKGA LAM RALK +G+ QV Y+NAH TSTP+GD
Sbjct: 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGD 60
Query: 323 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLA 382
E AI+ VF DHA L SSTK IGHLLGAAGAVEAI V A++HGV P T+NL
Sbjct: 61 RAEVLAIKRVFGDHAK--RLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLE 118
Query: 383 KPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424
PDP + +F+P ++ + ALSNSF FGG NA L F +
Sbjct: 119 DPDPELDLDFVPEP--REAKVDYALSNSFAFGGHNAVLAFKR 158
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 124 bits (312), Expect = 8e-35
Identities = 70/161 (43%), Positives = 93/161 (57%), Gaps = 6/161 (3%)
Query: 264 IYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 323
I AEV GYG + DA+H+T PH +G+GAI A+ AL+++ + QV YVNAH TSTP +
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 324 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383
E+ AI V + SSTK GHLLGAAGAVEAI + A+ H P+T ++
Sbjct: 62 GESGAIVAVLGKE-----VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSE 116
Query: 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424
N + + I A+SN+FGFGG NA L F +
Sbjct: 117 VSDYIEANVVYGQG-LEKEIPYAISNTFGFGGHNAVLAFKR 156
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 124 bits (311), Expect = 1e-34
Identities = 64/160 (40%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Query: 265 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV 324
YAE+ GYG + D + P G+GA+ M A+ +DY+N+H TSTP+GD
Sbjct: 1 YAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHG---VDTPIDYLNSHGTSTPVGDVK 55
Query: 325 EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKP 384
E AIR VF D + A S+TK GH LGAAG EAI+++L + HG ++N+ +
Sbjct: 56 ELAAIREVFGDKS----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEEL 111
Query: 385 DPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424
D + T + D ++ +SNSFGFGGTNA+L+ K
Sbjct: 112 DEQAAGLNIV-TETTDRELTTVMSNSFGFGGTNATLVMRK 150
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 120 bits (302), Expect = 5e-33
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 9/200 (4%)
Query: 226 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAK-IYAEVRGYGMSGDAHHITQPH 284
P A PFD G+V GEG +LVLE+ A+ RG Y E+ G + D
Sbjct: 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP---GS 58
Query: 285 IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 344
G A+ AL +G VD V A P D EA AI VF
Sbjct: 59 GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVP----V 114
Query: 345 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 404
+ K G L G ++ + A++++ GV T + + + + +
Sbjct: 115 TVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVL-GEPRSTAPR 173
Query: 405 AALSNSFGFGGTNASLLFTK 424
AL + G G N++ + +
Sbjct: 174 TALVLARGRWGFNSAAVLRR 193
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 97.4 bits (241), Expect = 4e-24
Identities = 48/227 (21%), Positives = 79/227 (34%), Gaps = 27/227 (11%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+ P G G W L G R I+ D +
Sbjct: 10 VRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEAD----------------- 52
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
++ + R +A+ A EA + P D R GVS+G + +
Sbjct: 53 ---FDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDP-DTLDPARVGVSLGSAVAA 108
Query: 121 ISDTVDAAQMIC------EKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACA 174
+ ++ E LS ++ ++ V+ G +GP T C
Sbjct: 109 ATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCT 168
Query: 175 TGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK 221
+G S+G+A R I+ G +DVM AG ++ I + +A F RA T +
Sbjct: 169 SGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 89.4 bits (220), Expect = 3e-21
Identities = 40/220 (18%), Positives = 77/220 (35%), Gaps = 22/220 (10%)
Query: 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 60
+V P G G W ++ G G+ +T D+ Q+ F P I
Sbjct: 9 VVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHA---------PDHI 59
Query: 61 SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGS 120
+ + + A + GV G
Sbjct: 60 PGRLLPQTDPSTRLALTAADWALQDA------------KADPESLTDYDMGVVTANACGG 107
Query: 121 ISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSI 180
T + + + + +S + + +G +S+++G +GP+ A V A G ++
Sbjct: 108 FDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDAL 167
Query: 181 GDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 220
G A R I+ G + ++V+GG +S++D S ++T
Sbjct: 168 GHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 426 | |||
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.98 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.6 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.45 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.43 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.4 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.36 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.34 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.33 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.31 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.29 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.27 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.24 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.16 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.15 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.09 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.01 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.72 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 97.25 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.86 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 96.82 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 96.14 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 94.93 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 93.54 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 93.36 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 90.86 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 88.2 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 84.68 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 81.72 |
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.8e-48 Score=343.28 Aligned_cols=199 Identities=37% Similarity=0.628 Sum_probs=189.3
Q ss_pred CCCCCCCcccccCCCcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 014349 224 GTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 303 (426)
Q Consensus 224 ~~~~~~~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl 303 (426)
++|++.|||||.+++||++|||++++|||+.++|+++|+++|++|.|++.++++.+.+.+.+.+....++++++|+++++
T Consensus 1 ~~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i 80 (205)
T d1tqya2 1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 80 (205)
T ss_dssp SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcC
Confidence 35889999999999999999999999999999999999999999999999999999888888888889999999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Q 014349 304 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383 (426)
Q Consensus 304 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~ 383 (426)
+|+||+||++|||||+.+|.+|..+++++|+... .+++|+++|+++||+++|||++++++++++|++++|||+.|++.
T Consensus 81 ~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~--~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~ 158 (205)
T d1tqya2 81 DATDIDYINAHGSGTRQNDRHETAAYKRALGEHA--RRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRT 158 (205)
T ss_dssp CGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGG--GGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCS
T ss_pred CccceeeeeccccccccCchhHHHHHHHhhcccc--CCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCC
Confidence 9999999999999999999999999999998654 36899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++|.+++++++ .+++.++.|++++|+|||||+|+|+||+++
T Consensus 159 ~~p~~~~~~v~-~~~~~~~~~~a~~~s~GfGG~na~~vl~~~ 199 (205)
T d1tqya2 159 SDPECDLDYVP-LEARERKLRSVLTVGSGFGGFQSAMVLRDA 199 (205)
T ss_dssp BBTTBCSCCCB-SSCEECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred CCCCCCcccCC-CCCcCCCCCEEEEeCCCCCceeEEEEEeeC
Confidence 99999999998 667778899999999999999999999985
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=4e-47 Score=331.14 Aligned_cols=193 Identities=26% Similarity=0.379 Sum_probs=179.2
Q ss_pred CCCCCCcccccCCCcceeccceEEEEecchHHHHhcCC-eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 014349 225 TPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGL 303 (426)
Q Consensus 225 ~~~~~~~pf~~~~~G~~~geGa~alvL~~~~~A~~~g~-~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl 303 (426)
+|++.|||||.+++||++|||++++|||++++|+++|+ ++|++|.|++.++|+.+.+ +.+. +++++|+++|+++++
T Consensus 1 ~p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~-~~~~--g~~~~i~~aL~~a~i 77 (194)
T d1tqyb2 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS-GRPA--GLERAIRLALNDAGT 77 (194)
T ss_dssp CGGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC-CCCC--SHHHHHHHHHHHHTC
T ss_pred CCCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc-cchh--hhhhhhhhhcccccc
Confidence 47789999999999999999999999999999999997 6999999999999986643 2333 358899999999999
Q ss_pred CCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCC
Q 014349 304 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAK 383 (426)
Q Consensus 304 ~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~ 383 (426)
+|+||+||++|||||+.+|.+|..+|.++|+.. .++|+++|+++||+++|||++++++++++|++++|||++|++.
T Consensus 78 ~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~----~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~ 153 (194)
T d1tqyb2 78 GPEDVDVVFADGAGVPELDAAEARAIGRVFGRE----GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTS 153 (194)
T ss_dssp CGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTT----CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCC
T ss_pred cccceeeeeccccCcccccHHHhhhhhhhhhcc----ccccccccccccccccccccceehhhhhhhhhceeccccCCCC
Confidence 999999999999999999999999999999764 4899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 384 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
++|++++++++ .+++....+++++|+|||||+|+|+||+||
T Consensus 154 ~~~~~~~~~v~-~~~~~~~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 154 VPREYGIDLVL-GEPRSTAPRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp CCGGGCCEECB-SSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCcccCccccC-CCCccCCCCEEEEECcCCCceeEEEEEeeC
Confidence 99999998888 778888899999999999999999999997
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.8e-45 Score=332.49 Aligned_cols=240 Identities=43% Similarity=0.776 Sum_probs=222.8
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|+++++++ ...++.++++.+++ |+...+++++..++|+
T Consensus 11 ~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~~~v~~------~~~~~~~~~~~~~~~d 70 (250)
T d2gfva1 11 MLSPVGNTVESTWKALLAGQSGISLIDHFD--------------TSAYATKFAGLVKD------FNCEDIISRKEQRKMD 70 (250)
T ss_dssp EEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTCSCCEEECCTT------CCCTTTSCHHHHTTSC
T ss_pred eECCCcCCHHHHHHHHHcCCCeeecCCccc--------------ccccCCccceeccc------chhhhhhhhHHHhhcC
Confidence 589999999999999999999999999776 45677889999987 7766668899999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|+++|++.++++||+|||+...+. ++.++||++|++.+.....+.....+.......++|..++..+.+.++++|++.|
T Consensus 71 ~~~~~~l~aa~~Al~dAg~~~~~~-~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~ 149 (250)
T d2gfva1 71 AFIQYGIVAGVQAMQDSGLEITEE-NATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMY 149 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTT-TGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCcccc-CccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHh
Confidence 999999999999999999988766 4889999999999999999888888888888899999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++|++|++||||+|..++|..+..|..++.++.. +.+|+..|||||.+++|+
T Consensus 150 gl~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~-~~~p~~~~rPFD~~rdG~ 228 (250)
T d2gfva1 150 GLRGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGF 228 (250)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHCCTTBTTCCSB
T ss_pred CCCCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCC-CCCCCCccCCCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999999999999865 455677899999999999
Q ss_pred eeccceEEEEecchHHHHhcCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGA 262 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~ 262 (426)
++|||+++||||++++|++||+
T Consensus 229 v~gEGaa~lVLE~~~~A~~rGA 250 (250)
T d2gfva1 229 VLGDGAGMLVLEEYEHAKKRGA 250 (250)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTC
T ss_pred eeeeEEEEEEECcHHHHHHCcC
Confidence 9999999999999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3e-44 Score=327.85 Aligned_cols=239 Identities=47% Similarity=0.816 Sum_probs=218.5
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.|+++||++|++|+++|+++++++ ...++.++++.++ +++..+++++..+.++
T Consensus 11 ~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~--------------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d 69 (249)
T d1j3na1 11 ALTPIGVGQEAFHKAQLAGKSGVRPITRFD--------------ASALPVRIAAEVD-------VDPGAYLDRKELRRLD 69 (249)
T ss_dssp EEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECCC-------CCGGGTSCHHHHTTSC
T ss_pred eECCCcCCHHHHHHHHHcCCCccccCCccc--------------cccCCcccccccc-------ccccccccHHHHhhCC
Confidence 589999999999999999999999999776 3455666666553 5556667899999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|++++++.++++||+|||++++++. +.|+||++|++.+.......+.....+.+...++|+.++..+.+.++++|+..|
T Consensus 70 ~~~~~~l~aa~~Al~dAGl~~~~~~-~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~ 148 (249)
T d1j3na1 70 RFVQYALIAAQLALEDAGLKPEDLD-PERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRY 148 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSC-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcC-CccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhc
Confidence 9999999999999999999987774 789999999999999999988888888889999999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||.+|+++|++|++|++||+|+|..++|..+..|...+.|+.. +..|++.|||||.+++|+
T Consensus 149 gl~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~-~~~p~~~~rPFd~~~dG~ 227 (249)
T d1j3na1 149 GFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASRPFTLSRDGF 227 (249)
T ss_dssp TCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHCCTTBTTCCCB
T ss_pred CCCCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCC-CCCCCCCCCCccCCCCCE
Confidence 9999999999999999999999999999999999999999999999999999999999864 445677899999999999
Q ss_pred eeccceEEEEecchHHHHhcCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGA 262 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~ 262 (426)
++||||+++|||++++|++||+
T Consensus 228 v~gEGa~~lvLe~~~~A~~rGA 249 (249)
T d1j3na1 228 VMGEGAGVLVLEAYEHAKKRGA 249 (249)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTC
T ss_pred eeEeEEEEEEEccHHHHHHCcC
Confidence 9999999999999999999985
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=2.6e-42 Score=315.66 Aligned_cols=240 Identities=43% Similarity=0.745 Sum_probs=221.7
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.|+++||++|++|+++|+++++++ ...++.++.+.+++ ++..+.++++..+.++
T Consensus 11 ~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~--------------~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~d 70 (250)
T d1e5ma1 11 AITPIGNTLQDYWQGLMEGRNGIGPITRFD--------------ASDQACRFGGEVKD------FDATQFLDRKEAKRMD 70 (250)
T ss_dssp EEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCCS------CCGGGTSCHHHHHTSC
T ss_pred eECCCCCCHHHHHHHHHcCCCeeccCCccc--------------cccccccccceeee------cccccccchhhhhhcC
Confidence 589999999999999999999999999877 34567778888875 5555568899999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|++++++.++.+||++||+.+..+ ...+++|++|++.+...........+.+.+.....|..+...+.+.++++++..|
T Consensus 71 ~~~~~~~~a~~~Al~~Agl~~~~~-~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (250)
T d1e5ma1 71 RFCHFAVCASQQAINDAKLVINEL-NADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINL 149 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTT-TGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCChHhh-cCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhc
Confidence 999999999999999999988776 4889999999999999999999888888888899999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||..|+++|++|++|.+||||+|..+++..+..|..++.++.. +.+|...|||||.+++|+
T Consensus 150 gl~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~-~~~p~~~~rPFD~~~dG~ 228 (250)
T d1e5ma1 150 GAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHASRPFDKDRDGF 228 (250)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCGGGTCCTTBTTCCSB
T ss_pred cCCCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCC-CCCCCCccCCCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999999999999864 556778999999999999
Q ss_pred eeccceEEEEecchHHHHhcCC
Q 014349 241 VIGEGSGVLVLEELEHAKKRGA 262 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~ 262 (426)
++|||++++|||++++|++||+
T Consensus 229 ~~gEGa~~~vLe~l~~A~~rGA 250 (250)
T d1e5ma1 229 VMGEGSGILILEELESALARGA 250 (250)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTC
T ss_pred eeEeeEEEEEEeeHHHHHHCcC
Confidence 9999999999999999999985
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=9.4e-41 Score=281.85 Aligned_cols=161 Identities=49% Similarity=0.773 Sum_probs=153.7
Q ss_pred eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcc
Q 014349 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 263 ~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~ 342 (426)
+||++|.|++.++|+++.+.|.+++.++.++|++||++++++|+|||||++|||||+.+|.+|..+++++|+.+. .++
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~--~~~ 78 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHA--YNI 78 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG--GGS
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCC--Ccc
Confidence 589999999999999999999999999999999999999999999999999999999999999999999998653 468
Q ss_pred eecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEe
Q 014349 343 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 343 ~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl 422 (426)
+|+++|+++||+++|||++++++++++|++++|||++|+++|+|.++.++++ .+++.+..+++++|+|||||+|+|+||
T Consensus 79 ~v~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~nsfGfGG~Na~lvl 157 (161)
T d1e5ma2 79 AVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP-GQSRALIVDVALSNSFGFGGHNVTLAF 157 (161)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB-SSCEECCCSEEEEEEEETTTEEEEEEE
T ss_pred eEEecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCc-CcccCCCCCEEEEeCcCcCcEeEEEEE
Confidence 9999999999999999999999999999999999999999999999999888 777888899999999999999999999
Q ss_pred eecC
Q 014349 423 TKCQ 426 (426)
Q Consensus 423 ~~~~ 426 (426)
+||+
T Consensus 158 ~~y~ 161 (161)
T d1e5ma2 158 KKYQ 161 (161)
T ss_dssp ECCC
T ss_pred eeeC
Confidence 9986
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=8.2e-40 Score=302.39 Aligned_cols=261 Identities=78% Similarity=1.255 Sum_probs=223.6
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|++++.++|....|+.+.........+.+++++++.......|+...+ ....+++
T Consensus 10 ~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 86 (270)
T d2ix4a1 10 MVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALW---LNSKAVA 86 (270)
T ss_dssp EEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHH---SCSTTCC
T ss_pred eECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHh---hhhhhhh
Confidence 5899999999999999999999999999999877777766554455677888898876322233433322 2345677
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
+....+..+..+|+.+++....+.....++++.+....+.....................|+.+++.+.+.++++|++.|
T Consensus 87 ~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 166 (270)
T d2ix4a1 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (270)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHh
Confidence 88899999999999999986543323456788888777777777777777777778889999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 240 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~ 240 (426)
|++||+++|+++|+|++.||.+|+++|++|+||++||||+|..+.|..+..|..+++++...+.+|+..|||||.+++|+
T Consensus 167 ~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rPFD~~a~G~ 246 (270)
T d2ix4a1 167 GFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGF 246 (270)
T ss_dssp TCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTCCSB
T ss_pred CCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCCCCCCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999877778889999999999999
Q ss_pred eeccceEEEEecchHHHHhcCCee
Q 014349 241 VIGEGSGVLVLEELEHAKKRGAKI 264 (426)
Q Consensus 241 ~~geGa~alvL~~~~~A~~~g~~~ 264 (426)
++|||++++|||++++|+++|++|
T Consensus 247 v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 247 VIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred eeEeeEEEEEEeeHHHHHHccCCC
Confidence 999999999999999999999875
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.6e-40 Score=299.70 Aligned_cols=242 Identities=33% Similarity=0.489 Sum_probs=209.4
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.++++||++|++|+++|+++++++ ...++.+..+.+. +....++.....+.++
T Consensus 11 ~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~--------------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 69 (253)
T d2vbaa1 11 IVSSIGNNQQEVLASLREGRSGITFSQELK--------------DSGMRSHVWGNVK-------LDTTGLIDRKVVRFMS 69 (253)
T ss_dssp EEBTTBSSHHHHHHHHHHTCCCEEECHHHH--------------HTTCSCCEEECCC-------CCCTTSSCHHHHTTCC
T ss_pred EECCCCCCHHHHHHHHHcCCCccccCCccc--------------cccCccccccccc-------ccccccccchhhccch
Confidence 589999999999999999999999998766 2345566666554 3444456788889999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHH-HhhccCCCCcchhhhhhhHHHHHHHHH
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMIC-EKRLRRLSPFFIPRILINMASGHVSMK 159 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~i~~~ 159 (426)
+..++...++.+|++++|+......+..++|+++|++.+...........+. ..+...++|+.++..+.+.++++|++.
T Consensus 70 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (253)
T d2vbaa1 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred hhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccc
Confidence 9999999999999999999765444578999999999988776665554442 335567789999999999999999999
Q ss_pred cCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 160 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 160 lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
||++||+++++++|+|++.||..|+++|++|++|++||+|+|. +.+.....+..++.++...+.+|+..|||||.+++|
T Consensus 150 ~g~~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~-~~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~~G 228 (253)
T d2vbaa1 150 FKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDG 228 (253)
T ss_dssp TTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCS
T ss_pred cCcccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhh-hhcchhhhHHHHHHHhcCCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999997 455567788999999887777889999999999999
Q ss_pred ceeccceEEEEecchHHHHhcCCee
Q 014349 240 FVIGEGSGVLVLEELEHAKKRGAKI 264 (426)
Q Consensus 240 ~~~geGa~alvL~~~~~A~~~g~~~ 264 (426)
|++|||++++|||++++|++||++|
T Consensus 229 ~v~gEGa~~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 229 FVIAGGGGMVVVEELEHALARGAHI 253 (253)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred EeeeeEEEEEEEccHHHHHHccCcC
Confidence 9999999999999999999999875
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=1.4e-40 Score=279.64 Aligned_cols=158 Identities=44% Similarity=0.653 Sum_probs=151.7
Q ss_pred eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcc
Q 014349 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 263 ~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~ 342 (426)
+||++|+|++.++|+++.+.|++++.++.++|+++|+++++.|+|||||++|||||+.+|.+|..+++++|+. ++
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~-----~~ 75 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK-----EV 75 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS-----SS
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC-----cc
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999975 48
Q ss_pred eecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEe
Q 014349 343 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 343 ~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl 422 (426)
+++++|+++||+++|||++++++++++|+++++||++|+++++|.+++++++ .+++..+.+++++|||||||+|+|+||
T Consensus 76 ~v~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~nsfGfGG~Na~lvl 154 (158)
T d1ox0a2 76 PVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY-GQGLEKEIPYAISNTFGFGGHNAVLAF 154 (158)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB-SSCEECCCSEEEEEEEETTTEEEEEEE
T ss_pred cCcCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCccccc-CccccCCCCEEEEeCcCCCcEeEEEEE
Confidence 9999999999999999999999999999999999999999999999999888 677788899999999999999999999
Q ss_pred eecC
Q 014349 423 TKCQ 426 (426)
Q Consensus 423 ~~~~ 426 (426)
+||+
T Consensus 155 ~~~~ 158 (158)
T d1ox0a2 155 KRWE 158 (158)
T ss_dssp ECCC
T ss_pred EecC
Confidence 9996
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=1.6e-39 Score=274.48 Aligned_cols=161 Identities=78% Similarity=1.179 Sum_probs=151.8
Q ss_pred eEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCccee
Q 014349 265 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 344 (426)
Q Consensus 265 ~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v 344 (426)
|++|.|++.++|+++++.|+++++.+..+|+++|++++++|+||||||+|||||+.+|++|..+++++|+......+++|
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 78999999999999999999999998999999999999999999999999999999999999999999987543457899
Q ss_pred cccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 345 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 345 ~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
+++|+++||+++|||++++++++++|+++++||++|+++|+|.++...+++..+++..+|++++|+|||||+|+|+||++
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 99999999999999999999999999999999999999999999988887677777789999999999999999999997
Q ss_pred c
Q 014349 425 C 425 (426)
Q Consensus 425 ~ 425 (426)
.
T Consensus 161 ~ 161 (161)
T d2ix4a2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.4e-39 Score=270.57 Aligned_cols=161 Identities=51% Similarity=0.814 Sum_probs=148.3
Q ss_pred eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcc
Q 014349 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 263 ~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~ 342 (426)
+||++|+|++.++|+.+.+.|++++.++.++++++|++++++|+||||||+|||||+.+|++|..+++++|+... .++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~--~~~ 78 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAA--SRV 78 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGG--TTS
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccc--ccc
Confidence 589999999999999999999999999999999999999999999999999999999999999999999998653 468
Q ss_pred eecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEe
Q 014349 343 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 343 ~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl 422 (426)
+|+++|+++||+++|||++++++++++|+++++||++|+++|+|.+.....+....+..+++++++|+|||||+|+|+||
T Consensus 79 ~i~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil 158 (161)
T d2gfva2 79 LVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 158 (161)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEE
T ss_pred eeccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEE
Confidence 99999999999999999999999999999999999999999999987776652333445679999999999999999999
Q ss_pred eec
Q 014349 423 TKC 425 (426)
Q Consensus 423 ~~~ 425 (426)
+|.
T Consensus 159 ~~~ 161 (161)
T d2gfva2 159 KKI 161 (161)
T ss_dssp ECC
T ss_pred EEC
Confidence 984
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=5e-39 Score=270.85 Aligned_cols=159 Identities=58% Similarity=0.918 Sum_probs=149.7
Q ss_pred eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcc
Q 014349 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 263 ~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~ 342 (426)
+||++|.|++.++|+.+.+.|+++++++..+++++|+++|++|+||||||+|||||+.+|.+|..+|+++|+... .++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~--~~~ 78 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHA--KRL 78 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHH--TTC
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcC--CCc
Confidence 589999999999999999999999999999999999999999999999999999999999999999999997653 368
Q ss_pred eecccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEe
Q 014349 343 AFSSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLF 422 (426)
Q Consensus 343 ~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl 422 (426)
+|++.|+++||+++|||++++++++++|+++++||++|+++++|.+++.+++ +++..+.+++++|+|||||+|+|+||
T Consensus 79 ~i~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~--~~~~~~~~~a~v~sfGfgG~Na~~vl 156 (159)
T d1j3na2 79 MVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPREAKVDYALSNSFAFGGHNAVLAF 156 (159)
T ss_dssp EEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS--SCEECCCSEEEEEEECTTSEEEEEEE
T ss_pred eEecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccC--cccCCCCCEEEEeCCCCCceeEEEEE
Confidence 8999999999999999999999999999999999999999999999888776 45667899999999999999999999
Q ss_pred eec
Q 014349 423 TKC 425 (426)
Q Consensus 423 ~~~ 425 (426)
+|.
T Consensus 157 ~kv 159 (159)
T d1j3na2 157 KRV 159 (159)
T ss_dssp ECC
T ss_pred EEC
Confidence 984
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.3e-36 Score=248.93 Aligned_cols=151 Identities=43% Similarity=0.702 Sum_probs=137.9
Q ss_pred eEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCccee
Q 014349 265 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 344 (426)
Q Consensus 265 ~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v 344 (426)
|++|.|++.++|+.+++.|+ +.++.++|+++++++ +.|||||++|||||+++|.+|..+++++|+.+ .++|
T Consensus 1 Yaei~G~g~~~Dg~~~taP~--~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~----~~~v 71 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDK----SPAI 71 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTC----CCEE
T ss_pred CEEEEEEEEecCCCCCCCcC--HHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCC----Cccc
Confidence 78999999999999988875 467799999999876 57999999999999999999999999999864 4789
Q ss_pred cccccccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 345 SSTKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 345 ~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
++.|+++||+++|||++++++++++|+++++||++|++.++|++....++ .++++++.+.+++|+|||||+|+|+||+|
T Consensus 72 ~s~K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~-~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 72 SATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIV-TETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEEC-CSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccchhhccccccchhhhhhhHHHHHHHcCCcccccCcccccccccccccc-CcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 99999999999999999999999999999999999999999987665555 66777889999999999999999999998
Q ss_pred c
Q 014349 425 C 425 (426)
Q Consensus 425 ~ 425 (426)
.
T Consensus 151 v 151 (151)
T d2vbaa2 151 L 151 (151)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.7e-34 Score=254.62 Aligned_cols=198 Identities=24% Similarity=0.356 Sum_probs=184.8
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCCCChhhhhccC
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIA 80 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~ 80 (426)
+|||+|.|+++||++|++|+++|+++++++ ...++.++++++++ |+...+++++..+.|+
T Consensus 9 ~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~--------------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 68 (208)
T d1tqyb1 9 VVAPNGLGLAPYWSAVLDGRHGLGPVTRFD--------------VSRYPATLAGQIDD------FHAPDHIPGRLLPQTD 68 (208)
T ss_dssp EEETTEESHHHHHHHHHTTCCCEEECTTTT--------------GGGSSCCEEECCCS------CCHHHHSCTTTGGGCC
T ss_pred eECCCcCCHHHHHHHHHcCCCceecCcccC--------------chhccccccccccc------ccccccCChhHhhccc
Confidence 589999999999999999999999998776 34567888898876 7777778899999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
|.++|++.++.+||+|||+++.++ .+.++++++|++.++....+..++.+.....+.+.|+.++..+.++.+++|+..|
T Consensus 69 ~~~~~~~~a~~~Al~~Ag~~~~~~-~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~ 147 (208)
T d1tqyb1 69 PSTRLALTAADWALQDAKADPESL-TDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRH 147 (208)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGS-CGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHH
T ss_pred cccccccccccccchhhhcccccc-cccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcc
Confidence 999999999999999999988777 4889999999999999999999999988888999999999999999999999999
Q ss_pred CCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhccc
Q 014349 161 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 220 (426)
Q Consensus 161 gl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~ 220 (426)
|++||+++++++|+|++.||..|+++|++| +|++||||+|..++|..+..|..+++|+.
T Consensus 148 gl~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 148 GMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp TCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred cccceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999 99999999999999999999999999984
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.98 E-value=8.8e-32 Score=239.71 Aligned_cols=199 Identities=26% Similarity=0.401 Sum_probs=174.8
Q ss_pred CccCCCCCHHHHHHHHHcCCCceeeCCccccccCCCCchhhhcccCCCccceeEEeCCCCCCCCCCccCC-CChhhhhcc
Q 014349 1 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSI 79 (426)
Q Consensus 1 ~vsp~G~~~~~~~~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~-~~~~~~~~~ 79 (426)
+|||+|.++++||++|++|+++|++++.++ ...+...++..++ ||...+ ++++..+.+
T Consensus 10 ~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 68 (216)
T d1tqya1 10 VRAPGGNGTRQFWELLTSGRTATRRISFFD--------------PSPYRSQVAAEAD-------FDPVAEGFGPRELDRM 68 (216)
T ss_dssp EEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECCC-------CCHHHHTCCHHHHHHS
T ss_pred eECCCCCCHHHHHHHHHcCCCEeecCCccC--------------CCccccccccccc-------ccccccccChhhhccc
Confidence 479999999999999999999999999776 2234444544443 555444 899999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhc------cCCCCcchhhhhhhHHH
Q 014349 80 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL------RRLSPFFIPRILINMAS 153 (426)
Q Consensus 80 ~~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a 153 (426)
++.++|++.+++|||+|||+++.+.. ..+++++++++.+........+..+...+. ..+.++.++..+++.++
T Consensus 69 ~~~~~~~l~aa~~Al~dAg~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 147 (216)
T d1tqya1 69 DRASQFAVACAREAFAASGLDPDTLD-PARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMP 147 (216)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCTTTCC-GGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHH
T ss_pred CcchhhHHHHHHHHHHHhcCCccccc-cccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHH
Confidence 99999999999999999999887764 789999999999999998888887776543 35667788888999999
Q ss_pred HHHHHHcCCCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccc
Q 014349 154 GHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK 221 (426)
Q Consensus 154 ~~i~~~lgl~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~ 221 (426)
.++++.||++||+++++++|+|++.||.+|+++|++|++|++||||+|..++|..+.+|+.+++|+.+
T Consensus 148 ~~ia~~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 148 AEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp HHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred HHHHHhcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999853
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.60 E-value=2.3e-15 Score=143.45 Aligned_cols=258 Identities=15% Similarity=0.109 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ -|+++++. + ...+..+.+|+..|
T Consensus 91 ~~~~la~~Aa~~aL~~ag~~~~dId-----~lI~~t~t-~--------------------------~~~P~~a~~v~~~L 138 (372)
T d1teda_ 91 HAVPLAVDVSKRALAGLPYRAAEIG-----LLVLATST-G--------------------------FIAPGVDVAIVKEL 138 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-----EEEEEESS-C--------------------------CCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccC-C--------------------------CCCchHHHHHHhhh
Confidence 4567999999999999999877765 55555532 1 11235677899999
Q ss_pred CCCCCe--eecc-CCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCC
Q 014349 161 GFQGPN--HAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 237 (426)
Q Consensus 161 gl~gp~--~~v~-~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~ 237 (426)
|++... +.+. .||++++.||..|..+|++|..+.+||+++|.+..... . .+ .++...
T Consensus 139 Gl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~~----------~------~d----~~~~~~ 198 (372)
T d1teda_ 139 GLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAV----------F------AD----DINDVV 198 (372)
T ss_dssp TCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCC----------C------CS----SHHHHH
T ss_pred ccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhccccc----------C------CC----cchhhh
Confidence 997643 3343 58999999999999999999999999999996321100 0 00 000111
Q ss_pred CcceeccceEEEEecchHHHHhcCCeeeEEEEeEEEe-c-CCCCC-----C------CCCC-----ChHHHHHHHHHHHH
Q 014349 238 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS-G-DAHHI-----T------QPHI-----DGKGAILAMTRALK 299 (426)
Q Consensus 238 ~G~~~geGa~alvL~~~~~A~~~g~~~~a~i~g~~~~-~-d~~~~-----~------~~~~-----~~~~~~~a~~~al~ 299 (426)
..+++||||+|+||++.+...... .....+.+.... . +.... . .... ........++++|+
T Consensus 199 ~~~lfGDGAaA~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 277 (372)
T d1teda_ 199 IHSLFGDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLW 277 (372)
T ss_dssp HHHHBCEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccceeEEeccCCcccccC-CceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHH
Confidence 235689999999998654322111 111233332221 1 11000 0 0001 12345678999999
Q ss_pred HcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHHHHHHHhCCcCCC
Q 014349 300 QSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFAVLAIHHGVAPLT 378 (426)
Q Consensus 300 ~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~ 378 (426)
++|++++|||++.+|-.+... ...+.+.++-.. .+++.+ ..-..+||+.+|+=.+.+-. .++++.+
T Consensus 278 ~~gl~~~did~~i~Hq~~~~i-----~~~i~~~Lgl~~--ek~~~s~~~l~~~GN~~sasip~~L~~---~l~~g~~--- 344 (372)
T d1teda_ 278 DNGLQISDIDLWAIHPGGPKI-----IEQSVRSLGISA--ELAAQSWDVLARFGNMLSVSLIFVLET---MVQQAES--- 344 (372)
T ss_dssp HTTCCGGGCSCEEECCSCHHH-----HHHHHHHHTCCG--GGGHHHHHHHHHHCBCTHHHHHHHHHH---HHHSCSS---
T ss_pred hcCCCHHHhhhhhccCccHHH-----HHHHHHHcCCCH--HHhhhhHHHHhccCCcHHHHHHHHHHH---HHHhCCC---
Confidence 999999999999999655332 333444444321 122211 12345699887764443322 3444331
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 379 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
....+.++..+||-|=+..++||+..
T Consensus 345 ---------------------~~g~d~vll~~fG~G~s~~~~ll~~~ 370 (372)
T d1teda_ 345 ---------------------AKAISTGVAFAFGPGVTVEGMLFDII 370 (372)
T ss_dssp ---------------------SSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred ---------------------CCCCCEEEEEEEcHHHhHHHHhheee
Confidence 11235677778887767788888765
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.45 E-value=4.8e-14 Score=109.31 Aligned_cols=119 Identities=24% Similarity=0.373 Sum_probs=94.4
Q ss_pred CCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCC
Q 014349 261 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG 340 (426)
Q Consensus 261 g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~ 340 (426)
|.+|+++|.+++... ..|...+.+...+++++|+++|++++|||++|+| |+||.+.+...+..+-
T Consensus 2 gl~plAri~~~a~~g-----~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~Ein----------EAFA~q~l~~~~~l~i 66 (124)
T d1afwa2 2 NLPVLGRYIDFQTVG-----VPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEIN----------EAFAAQALYCIHKLGI 66 (124)
T ss_dssp TCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEC----------CSBHHHHHHHHHHHTC
T ss_pred CCcEEEEEEEEEEEe-----cCHHHhhhChHHHHHHHHHHcCCCcccCcEEEec----------cchhHHHHHHHHHcCC
Confidence 678999999998876 3566667788999999999999999999999999 9999988876554322
Q ss_pred cce-eccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccce
Q 014349 341 SLA-FSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTN 417 (426)
Q Consensus 341 ~~~-v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~ 417 (426)
+.. +|...+ .+|||.||||...++.++.+|+++ +++++....-||..
T Consensus 67 d~~kvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~~------------------------------~~glas~C~ggG~G 116 (124)
T d1afwa2 67 DLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD------------------------------QIGVVSMCIGTGMG 116 (124)
T ss_dssp CGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT------------------------------CEEEEEEEETTTEE
T ss_pred ChhhccccCccceecCCcCCchHHHHHHHHHHhccC------------------------------CEEEEEEcccCCcE
Confidence 222 333333 889999999999999999887531 36677777777888
Q ss_pred eeeEeee
Q 014349 418 ASLLFTK 424 (426)
Q Consensus 418 ~~~vl~~ 424 (426)
.++|++|
T Consensus 117 ~a~~ier 123 (124)
T d1afwa2 117 AAAIFIK 123 (124)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888886
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.43 E-value=1.4e-13 Score=106.65 Aligned_cols=120 Identities=24% Similarity=0.304 Sum_probs=94.2
Q ss_pred eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhccc--CCC
Q 014349 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHA--TSG 340 (426)
Q Consensus 263 ~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~--~~~ 340 (426)
+|+++|.+++... ..|...+.+...+++++|+++|++++|||++|+| |+||.+.+...+. .+.
T Consensus 1 KPlA~i~~~~~~g-----~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~Ein----------EAFAaq~l~~~~~~~l~~ 65 (125)
T d1ulqa2 1 RPLARVRAIAVAG-----VPPRIMGIGPVPATRKALERAGLSFSDLGLIELN----------EAFAAQALAVLREWSLSM 65 (125)
T ss_dssp CCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEEC----------CSBHHHHHHHHHHHTCCT
T ss_pred CCeEEEEEEEEEe-----cCHHHHhhccHHHHHhHhhccCcCccccchheec----------cccchhHHHHHHHhhccC
Confidence 4789999998876 3566666677899999999999999999999999 9998777654332 111
Q ss_pred cc-eeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccce
Q 014349 341 SL-AFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTN 417 (426)
Q Consensus 341 ~~-~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~ 417 (426)
+. .+|...+ .+|||.||||...++..+.+|+++ ..++.++....-||..
T Consensus 66 d~~kvN~~GGaIAlGHP~GASGari~~tl~~~L~~~----------------------------~~~~G~as~C~gGG~g 117 (125)
T d1ulqa2 66 EDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR----------------------------KVQFGLATMCIGVGQG 117 (125)
T ss_dssp TCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETTTEE
T ss_pred chhhcCCCCCcccccCCccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccce
Confidence 11 1343444 889999999999999999999863 2468888888889999
Q ss_pred eeeEeeec
Q 014349 418 ASLLFTKC 425 (426)
Q Consensus 418 ~~~vl~~~ 425 (426)
.++++|+.
T Consensus 118 ~A~~iE~i 125 (125)
T d1ulqa2 118 IAVVVEGM 125 (125)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEeC
Confidence 99999974
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.40 E-value=1.6e-13 Score=106.21 Aligned_cols=120 Identities=23% Similarity=0.319 Sum_probs=96.1
Q ss_pred eeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcc
Q 014349 263 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSL 342 (426)
Q Consensus 263 ~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~ 342 (426)
+|+++|.+++... ..|...+.+...+++++|+++|++.+|||++|+| |+||.+.+...+..+-+.
T Consensus 2 ~Plari~~~a~~g-----~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~Ein----------EAFA~q~la~~~~l~id~ 66 (124)
T d1m3ka2 2 QPLGRIVSWATVG-----VDPKVMGTGPIPASRKALERAGWKIGDLDLVEAN----------EAFAAQACAVNKDLGWDP 66 (124)
T ss_dssp CCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC----------CSBHHHHHHHHHHHCCCG
T ss_pred CcEEEEEEEEEEe-----cChHHhccchHHHHHHHHHHcCCChhcccHHHhc----------ccchhheeeehHhhCCCh
Confidence 5789999998876 3566666777899999999999999999999999 999988886654422222
Q ss_pred e-eccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceee
Q 014349 343 A-FSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 419 (426)
Q Consensus 343 ~-v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~ 419 (426)
. +|...+ .+|||.||||...++.++..|+++ ..++.+++...-||...+
T Consensus 67 ~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~~----------------------------~~~~Glas~C~gGG~g~A 118 (124)
T d1m3ka2 67 SIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR----------------------------GARKGLATLCIGGGMGVA 118 (124)
T ss_dssp GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH----------------------------TCSEEEEEEEETTTEEEE
T ss_pred hhcCCCCCccccccCcCccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeE
Confidence 2 333333 889999999999999999999862 246788888888999999
Q ss_pred eEeeec
Q 014349 420 LLFTKC 425 (426)
Q Consensus 420 ~vl~~~ 425 (426)
+++|+.
T Consensus 119 ~liE~v 124 (124)
T d1m3ka2 119 MCIESL 124 (124)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999874
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.36 E-value=5.4e-13 Score=103.91 Aligned_cols=122 Identities=24% Similarity=0.311 Sum_probs=96.3
Q ss_pred CCeeeEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCC
Q 014349 261 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSG 340 (426)
Q Consensus 261 g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~ 340 (426)
|.+|+++|.+++... ..|...+.+...+++++|+++|++++|||++|+| |+||.+.+...+..+.
T Consensus 1 Gl~pla~i~~~~~~g-----~dP~~mg~~p~~A~~klL~ragl~~~did~~Ein----------EAFA~q~l~~~~~~~~ 65 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAG-----VDPAIMGYGPVPATQKALKRAGLNMADIDFIELN----------EAFAAQALPVLKDLKV 65 (128)
T ss_dssp TCCCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC----------CSBHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEEEEEe-----cCHHHhccCcHHHHHHHhhhcCccccccceEEee----------cccchhhhhhhhhccc
Confidence 467899999998876 3566566677899999999999999999999999 9988877754332110
Q ss_pred -cc---eeccccc--ccchhHHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccc
Q 014349 341 -SL---AFSSTKG--AIGHLLGAAGAVEAIFAVLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFG 414 (426)
Q Consensus 341 -~~---~v~s~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~g 414 (426)
.. .+|...+ .+|||.||||...++.++.+|++. ..++.++....-|
T Consensus 66 ~~~~~ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~----------------------------~~~~Glas~C~gG 117 (128)
T d1wdkc2 66 LDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN----------------------------GGTFGLSTMCIGL 117 (128)
T ss_dssp GGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETT
T ss_pred ccCCcceecCCCCcccccccccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccc
Confidence 11 1444444 889999999999999999999873 2457888888889
Q ss_pred cceeeeEeeec
Q 014349 415 GTNASLLFTKC 425 (426)
Q Consensus 415 G~~~~~vl~~~ 425 (426)
|...++++++.
T Consensus 118 G~g~A~~iErv 128 (128)
T d1wdkc2 118 GQGIATVFERV 128 (128)
T ss_dssp TEEEEEEEECC
T ss_pred cceeEEEEEeC
Confidence 99999999974
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.34 E-value=7e-13 Score=111.41 Aligned_cols=119 Identities=14% Similarity=0.232 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+.+|+++||+++|+++++++ -|++.+..+ ....+..+..|+..||
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~dId-----lli~~s~t~--------------------------~~~~p~~a~~v~~~Lg 97 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEGVD-----AVIVATNTP--------------------------DALFPDTAALVQARFG 97 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEE-----EEEEECSSC--------------------------SEEESCHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHhhcCcccccce-----EEEEecccc--------------------------cccccchHHHHHHHhc
Confidence 568999999999999999887775 566655331 2233456678899999
Q ss_pred CCCCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCcce
Q 014349 162 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 241 (426)
Q Consensus 162 l~gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G~~ 241 (426)
.+.+++.|..+|++++.+|..|..+|++|.++.+||+++|.++... -++.....++
T Consensus 98 ~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~~~------------------------~~~d~~~~~l 153 (172)
T d1ub7a1 98 LKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKII------------------------DWNDRATAVL 153 (172)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTS------------------------CTTCHHHHTT
T ss_pred cCccceeehhccccHHHHHHHHhhhhhcCCcceeEEeccccccccc------------------------CCCCcCeEEE
Confidence 8889999999999999999999999999999999999999732110 0111223556
Q ss_pred eccceEEEEecchH
Q 014349 242 IGEGSGVLVLEELE 255 (426)
Q Consensus 242 ~geGa~alvL~~~~ 255 (426)
+||||+|+||++.+
T Consensus 154 fGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 154 FGDGGGAAVVGKVR 167 (172)
T ss_dssp BCCEEEEEEEECCC
T ss_pred ecceeEEEEEEEcC
Confidence 89999999998754
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.33 E-value=6e-13 Score=112.10 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ -|++++..+. ...+..+..|...|
T Consensus 50 ~~~~la~~Aa~~al~~a~~~~~~Id-----~li~~s~~~~--------------------------~~~P~~a~~v~~~L 98 (174)
T d1hnja1 50 TVSTMGFEAATRAIEMAGIEKDQIG-----LIVVATTSAT--------------------------HAFPSAACQIQSML 98 (174)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCS--------------------------CSSSCHHHHHHHHH
T ss_pred cchHHHHHHHHHhhhhccccccccc-----EEEEecCCcc--------------------------ccccchhhhhhhcc
Confidence 3568999999999999999988887 7777774322 22346677899999
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
|++. +++.+..+|++++.||..|..+|++|.++.+||+++|..+.. +. +......
T Consensus 99 gl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S~~-----------~~-------------~~d~~~~ 154 (174)
T d1hnja1 99 GIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLART-----------CD-------------PTDRGTI 154 (174)
T ss_dssp TCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHH-----------SC-------------TTCHHHH
T ss_pred CCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhhcc-----------cC-------------CCCCCeE
Confidence 9986 889999999999999999999999999999999999963210 10 1111123
Q ss_pred ceeccceEEEEecchH
Q 014349 240 FVIGEGSGVLVLEELE 255 (426)
Q Consensus 240 ~~~geGa~alvL~~~~ 255 (426)
+++||||+|+||++.+
T Consensus 155 ~lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 155 IIFGDGAGAAVLAASE 170 (174)
T ss_dssp TTBCCEEEEEEEEEES
T ss_pred EEeceeeEEEEEEeCC
Confidence 5689999999999754
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.29 E-value=2.7e-12 Score=108.64 Aligned_cols=120 Identities=20% Similarity=0.236 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||+++|+++++++ .|++++..+. ......+..++..+
T Consensus 57 ~~~~ma~~Aa~~aL~~a~~~~~dId-----~li~~s~~~~--------------------------~~~p~~a~~v~~~l 105 (181)
T d1mzja1 57 TIQVMGVAASRRALEHAGVDPAEID-----LVVVSTMTNF--------------------------VHTPPLSVAIAHEL 105 (181)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCC--------------------------CCSSCHHHHHHHHH
T ss_pred cHHHHhHHHHHhhhhhccCChhHCe-----EEEEeccCCc--------------------------cccccHHHHHHHhh
Confidence 3578999999999999999988886 7777764322 12234566788889
Q ss_pred CCCC-CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCCc
Q 014349 161 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 239 (426)
Q Consensus 161 gl~g-p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~G 239 (426)
+.+. .++.+..+|++++.||..|..+|++|..+.+||+++|.+.. . + .++.....
T Consensus 106 ~~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s~-~----------~-------------~~~d~~~~ 161 (181)
T d1mzja1 106 GADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTD-V----------I-------------DLADRSLS 161 (181)
T ss_dssp TCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGG-G----------S-------------CSSCTTTT
T ss_pred cCCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeeccccc-c----------C-------------CCCCcceE
Confidence 9864 78999999999999999999999999999999999996321 0 0 12223446
Q ss_pred ceeccceEEEEecchH
Q 014349 240 FVIGEGSGVLVLEELE 255 (426)
Q Consensus 240 ~~~geGa~alvL~~~~ 255 (426)
+++||||+|+||++.+
T Consensus 162 ~lfGDGAaA~ll~~~~ 177 (181)
T d1mzja1 162 FLFGDGAGAAVVGPSD 177 (181)
T ss_dssp TTBCEEEEEEEEEEES
T ss_pred EEeeeeeEEEEEEeCC
Confidence 7899999999998643
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.27 E-value=1.4e-11 Score=111.10 Aligned_cols=94 Identities=17% Similarity=0.129 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+..+++++|+++|+++++++ .|++|+.... +.-...++..++...|
T Consensus 24 ~~dL~~~a~~~al~~~~i~~~~Id-----~vi~G~v~~~-------------------------g~~~~n~aR~~al~aG 73 (273)
T d1ulqa1 24 PDDLLAHALSVLVDRSGVPKEEVE-----DVYAGCANQA-------------------------GEDNRNVARMALLLAG 73 (273)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCS-------------------------STTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccc-------------------------ccccccHHHHHHHHcC
Confidence 356888999999999999999998 9999975321 0111235667777778
Q ss_pred CCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC
Q 014349 162 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 205 (426)
Q Consensus 162 l~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~ 205 (426)
+.. |.++|+..|+||+.||..|++.|++|..|++|++|+|+++.
T Consensus 74 lp~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~ 119 (273)
T d1ulqa1 74 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 119 (273)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSS
T ss_pred CCCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccch
Confidence 843 89999999999999999999999999999999999998663
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.24 E-value=1.6e-11 Score=110.24 Aligned_cols=93 Identities=18% Similarity=0.198 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+..+.+++|+++|+++.+++ .|++|+.... + -...++.+++...|
T Consensus 27 ~~dL~~~~~~~~l~~~~i~~~~Id-----~vi~G~~~~~-------------------------~-~~~n~ar~~al~ag 75 (268)
T d1m3ka1 27 AHELGATVISAVLERAGVAAGEVN-----EVILGQVLPA-------------------------G-EGQNPARQAAMKAG 75 (268)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCT-------------------------T-SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCc-----EEEEeecccc-------------------------C-cchHHHhHHHHHhC
Confidence 357899999999999999999998 8999985311 0 12345667788888
Q ss_pred CC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC
Q 014349 162 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 205 (426)
Q Consensus 162 l~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~ 205 (426)
+. -|+++|+..|+||+.||..|++.|++|++|++|++|+|+++.
T Consensus 76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~ 121 (268)
T d1m3ka1 76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSM 121 (268)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTT
T ss_pred CcccccceeecccCcccchHHHHHHHHHhCCCceEEeecccccccc
Confidence 85 388999999999999999999999999999999999999763
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.16 E-value=8.4e-11 Score=104.97 Aligned_cols=94 Identities=18% Similarity=0.156 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 82 FIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 82 ~~~l~~~a~~~Al~d-AGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...|+..+++++|++ +|+++++++ .|++|+..... .-...++..++...
T Consensus 30 ~~dL~~~~i~~~l~r~agi~~~~Id-----~vi~G~v~~~~-------------------------~~g~n~aR~~al~a 79 (262)
T d1wdkc1 30 AEDMSAHLISKVLERNSKVDPGEVE-----DVIWGCVNQTL-------------------------EQGWNIARMASLMT 79 (262)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE-----EEEEECSSBSB-------------------------TTTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHee-----EEEEEeecccc-------------------------cccccchhhhHhhh
Confidence 357889999999995 999998887 89999743210 11123566677777
Q ss_pred CCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCC
Q 014349 161 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 205 (426)
Q Consensus 161 gl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~ 205 (426)
|+.. |.++|+..|+||+.||..|++.|++|+.|++|++|+|+++.
T Consensus 80 g~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred hcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccccc
Confidence 7743 89999999999999999999999999999999999998765
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.15 E-value=2e-11 Score=104.97 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHcC
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 161 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lg 161 (426)
...|+..|+++||+++|+++++++ .|++.++.+ +. .+..+..+...+|
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~dId-----~lI~~s~t~----------------------~~-----~P~~aa~v~~~lg 122 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATDID-----VIIYVSCTG----------------------FM-----MPSLTAWLINEMG 122 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSS----------------------CC-----SSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCChhhhh-----eEEEeccCC----------------------CC-----cchhHHHHHHHHh
Confidence 457999999999999999998887 777766431 11 1345668899999
Q ss_pred CCC--Ceeec-cCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCC
Q 014349 162 FQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESS 203 (426)
Q Consensus 162 l~g--p~~~v-~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~ 203 (426)
++. +.+.+ ..+|++++.+|..|..+|++|..+.+||+++|.+
T Consensus 123 ~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~ 167 (200)
T d1u0ma1 123 FDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC 167 (200)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG
T ss_pred cCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEecc
Confidence 976 34555 4799999999999999999999999999999963
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.09 E-value=3.3e-10 Score=101.34 Aligned_cols=92 Identities=18% Similarity=0.138 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHH----cCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHH
Q 014349 82 FIAYALCAADEALHD----AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 157 (426)
Q Consensus 82 ~~~l~~~a~~~Al~d----AGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 157 (426)
...|+..++++++++ +|+++++++ .|++|+.... + ....++.+++
T Consensus 35 ~~~L~~~~i~~~l~r~~~~~~idp~~Id-----~vi~G~v~~~-------------------------g-~~~~~aR~~a 83 (269)
T d1afwa1 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE-----EVACGNVLNV-------------------------G-AGATEHRAAC 83 (269)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC-----CEEEECSSSB-------------------------G-GGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccccCChhhcC-----EEEecccccc-------------------------c-cccccchhhh
Confidence 356777888888875 568888887 8899974311 1 1234566777
Q ss_pred HHcCCC--CCeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCC
Q 014349 158 MKYGFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 204 (426)
Q Consensus 158 ~~lgl~--gp~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~ 204 (426)
..-|+. -|.++|+..|+||++||..|++.|++|+.|++|++|+|+++
T Consensus 84 l~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS 132 (269)
T d1afwa1 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMT 132 (269)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHH
T ss_pred hhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccc
Confidence 777874 49999999999999999999999999999999999999865
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.01 E-value=5.7e-10 Score=97.98 Aligned_cols=91 Identities=11% Similarity=0.015 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEEcCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 81 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 81 ~~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
....|+.+|+++||++||+++++++ .|++.++.+. . .+.. ...+...+
T Consensus 101 ~~~~la~~Aa~~aL~~a~~~~~dId-----~lI~~t~t~~----------------------~----~p~~-~a~~~~~l 148 (235)
T d1bi5a1 101 EVPRLGKEAAVKAIKEWGQPKSKIT-----HLIVCTTSGV----------------------D----MPGA-DYQLTKLL 148 (235)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSCC----------------------C----SSCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHCc-----EEEEecccCC----------------------c----cCcc-HHHHHHHH
Confidence 3457999999999999999998887 7888775422 1 1122 33566666
Q ss_pred CCCCCe--e-eccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCC
Q 014349 161 GFQGPN--H-AAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESS 203 (426)
Q Consensus 161 gl~gp~--~-~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~ 203 (426)
++.... + .+..+|++++.+|..|..+|++|..+.|||+++|.+
T Consensus 149 ~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~ 194 (235)
T d1bi5a1 149 GLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194 (235)
T ss_dssp TCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECG
T ss_pred hcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeec
Confidence 665432 3 357799999999999999999999999999999963
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.72 E-value=3.2e-09 Score=88.16 Aligned_cols=112 Identities=14% Similarity=0.166 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCcEEEEE-cCCCCChhHHHHHHHHHHHhhccCCCCcchhhhhhhHHHHHHHHHc
Q 014349 82 FIAYALCAADEALHDAKWLPSDQGQKERTGVSI-GGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 160 (426)
Q Consensus 82 ~~~l~~~a~~~Al~dAGl~~~~~~~~~~~gv~~-g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l 160 (426)
...|++.|++++|++.+ ++ ++++++ ++..+ .......+..+...+
T Consensus 50 ~~~ma~~Aa~~al~~~~--~~------~id~li~~t~~~--------------------------~~~~p~~a~~v~~~l 95 (166)
T d1xpma1 50 IVSMGANAAKDIITDED--KK------KIGMVIVATESA--------------------------VDAAKAAAVQIHNLL 95 (166)
T ss_dssp HHHHHHHHHHTTCCHHH--HH------HEEEEEEECSSC--------------------------SBSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHhhhcccc--CC------CCCeEEEecccc--------------------------ccccchhHHHHHHhh
Confidence 45689999999887654 23 345444 44221 122345677899999
Q ss_pred CCCC--CeeeccCCcchHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhhhhcccccCCCCCCCCcccccCCC
Q 014349 161 GFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 238 (426)
Q Consensus 161 gl~g--p~~~v~~acas~~~Al~~A~~~I~~G~~d~vlv~g~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pf~~~~~ 238 (426)
|++. .++.+..+|++++.||..|..+|++|..+.+||++.|..... ++ ..+
T Consensus 96 g~~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~~--------------------------~~-~~~ 148 (166)
T d1xpma1 96 GIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYG--------------------------LN-SGG 148 (166)
T ss_dssp TCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCC--------------------------TT-CSS
T ss_pred ccccceEEeeecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEecc--------------------------CC-CCC
Confidence 9965 678899999999999999999999999999999999852110 00 122
Q ss_pred cceeccceEEEEecch
Q 014349 239 GFVIGEGSGVLVLEEL 254 (426)
Q Consensus 239 G~~~geGa~alvL~~~ 254 (426)
-+.+||||+|+||++.
T Consensus 149 ~~~fGDGA~A~ll~~~ 164 (166)
T d1xpma1 149 EPTQGAGAVAMVIAHN 164 (166)
T ss_dssp GGGCEEEEEEEEEEES
T ss_pred CccCCCeeEEEEEecC
Confidence 3568999999999864
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.25 E-value=0.00091 Score=52.98 Aligned_cols=98 Identities=16% Similarity=0.161 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHH
Q 014349 290 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 369 (426)
Q Consensus 290 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 369 (426)
+.++++++|+++|++++|||++..|-.+ ..-..++.+-++-.. .+. +.+.-..+||+.+|+=.+.+.. +
T Consensus 50 v~~~i~~~L~~~gl~~~dId~~i~Hqa~-----~~i~~~v~~~lgl~~--ek~-~~~~~~~~GNt~sasip~~L~~---a 118 (148)
T d1u6ea2 50 MGDVGRRAMDAAGVRPDQIDVFVPHQAN-----SRINELLVKNLQLRP--DAV-VANDIEHTGNTSAASIPLAMAE---L 118 (148)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSC-----HHHHHHHHHHHTCCT--TCE-ECCTHHHHCBCGGGHHHHHHHH---H
T ss_pred HHHHHHHHHHHcCCCcccccEEEecccc-----HHHHHHHHHhcCCCc--hhh-hhhhHHhhCCCccchHHHHHHH---H
Confidence 4568999999999999999999999433 223445555555321 122 2234557899998886666554 3
Q ss_pred HHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 370 IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 370 l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
++.+.+ .+...++..+||.|=+-+++||+
T Consensus 119 ~~~g~i-------------------------~~Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 119 LTTGAA-------------------------KPGDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp HHHTSS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHcCCC-------------------------CCCCEEEEEEEchhhhheEEEEe
Confidence 455443 12356677789977667777765
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.86 E-value=0.0025 Score=50.36 Aligned_cols=97 Identities=21% Similarity=0.143 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHH
Q 014349 290 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 369 (426)
Q Consensus 290 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 369 (426)
...+++++|+++|++++|||++.+|-.+.. =...+.+-++-.. .+.+ ..-..+||+.+|+=.+.|. ..
T Consensus 49 vp~~i~~~L~~~g~~~~dId~~i~Hqa~~~-----~~~~i~~~lgi~~--~k~~--~~~~~~Gn~~sasip~~L~---~~ 116 (149)
T d1ub7a2 49 MNTATLEAIEKAGLTPEDIRLFVPHQANLR-----IIDAARERLGLPW--ERVA--VNVDRYGNTSTASIPLALK---EA 116 (149)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSCHH-----HHHHHHHTTTCCG--GGBC--CCHHHHCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHHhhccccccccEEEeeccchH-----HHHHHHhhccchh--hHHH--HHHHHhcCCcchhHHHHHH---HH
Confidence 347889999999999999999999943221 2233333333211 1222 2234679999988665443 34
Q ss_pred HHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 370 IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 370 l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
++.+.+ .+.+.++..+||.|-+..++||+
T Consensus 117 ~~~~~~-------------------------~~Gd~vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 117 VDAGRI-------------------------REGDHVLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp HHHTSS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHcCCC-------------------------CCCCEEEEEEEchHhhhEEEEEE
Confidence 455443 22456777899988777777775
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0042 Score=48.64 Aligned_cols=97 Identities=20% Similarity=0.162 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHHH
Q 014349 290 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLA 369 (426)
Q Consensus 290 ~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 369 (426)
..++++++|+++|++++|||++..|-.+.. =...+.+.++-.. .+++ ..-..+||+.+|+=.+.+-. .
T Consensus 46 ~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~-----~~~~~~~~l~l~~--~k~~--~~~~~~GN~~sasip~~L~~---~ 113 (143)
T d1hnja2 46 LAHIVDETLAANNLDRSQLDWLVPHQANLR-----IISATAKKLGMSM--DNVV--VTLDRHGNTSAASVPCALDE---A 113 (143)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSCHH-----HHHHHHHHTTCCG--GGBC--CCHHHHCBCGGGHHHHHHHH---H
T ss_pred hhHHHHHHHHHhhhcccccceEEeccCchH-----HHHHHHHhCccch--hhhh--hhhhhhcccccchHHHHHHH---H
Confidence 356889999999999999999999944322 2333444444321 1222 23447899998886655443 3
Q ss_pred HHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEee
Q 014349 370 IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 423 (426)
Q Consensus 370 l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~ 423 (426)
++.+.+ .+...++..+||.|=+.++++|+
T Consensus 114 ~~~~~~-------------------------~~Gd~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 114 VRDGRI-------------------------KPGQLVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp HHTTCS-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHhCCC-------------------------CCCCEEEEEEEehhhhhEEEEEE
Confidence 444432 23456677789987666777764
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=96.14 E-value=0.017 Score=45.50 Aligned_cols=100 Identities=17% Similarity=0.100 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHH
Q 014349 289 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 368 (426)
Q Consensus 289 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~ 368 (426)
.+.++++++|+++|++++|||++.+|-.+ ..-...+.+.++-.. ..+ +...-..+|++.+||=.+.|. .
T Consensus 49 ~vp~~i~~~L~~~gl~~~dId~~i~Hq~~-----~~~~~~v~~~lgi~~--ek~-~~~~~~~~GNt~Sasip~~L~---~ 117 (153)
T d1mzja2 49 DVVPAAREALEVAGLTVGDLVAFVPHQAN-----LRIIDVLVDRLGVPE--HVV-VSRDAEDTGNTSSASVALALD---R 117 (153)
T ss_dssp HHHHHHHHHHHTTTCCGGGCSEEEECCSC-----HHHHHHHHHHHTCCT--TSE-ECCTHHHHCBCTTHHHHHHHH---H
T ss_pred HHHHHHHHHHHHhCCCcccCCEEEEcCCc-----HHHHHHHHHHhCCCc--hhc-chhhhhhcCCcccchHHHHHH---H
Confidence 34568899999999999999999999443 223444555554321 111 222335678888876443332 2
Q ss_pred HHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeee
Q 014349 369 AIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 424 (426)
Q Consensus 369 ~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~ 424 (426)
.++++.+ .+...++..+||-|=+.++++|+-
T Consensus 118 ~~~~~~~-------------------------~~Gd~ill~~fG~G~s~~~~~l~~ 148 (153)
T d1mzja2 118 LVRSGAV-------------------------PGGGPALMIGFGAGLSYAGQALLL 148 (153)
T ss_dssp HHHHTSS-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHcCCC-------------------------CCCCEEEEEEEchhhhhhEEEEEe
Confidence 3444443 123456666888654445666654
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=94.93 E-value=0.02 Score=44.80 Aligned_cols=67 Identities=16% Similarity=0.192 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAV 361 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~ 361 (426)
.....+++++|+++|++++|||++.+|-.+.. -...+.+.++-.. .+++.+ .+-..+||+.+|+=.+
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~-----i~~~i~~~Lgl~~--~k~~~s~~~l~~~GN~~sasi~~ 110 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVHAGGPR-----ILDDLSTFLEVDP--HAFRFSRATLTEYGNIASAVVLD 110 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEECSHHH-----HHHHHHHHSCSCG--GGGHHHHHHHHHTCBCTTHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCCh--hhhhHHHHHHHhcCCCCcchHHH
Confidence 44668899999999999999999999943322 2333444443221 122211 1234679999887433
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=93.54 E-value=0.32 Score=37.80 Aligned_cols=110 Identities=11% Similarity=0.051 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
..+...+++.|+++|++.+|||++.+|--|.. =..++.+-++-.. .+++.+ .+-..+|.+.+||=..-+-..
T Consensus 42 ~~i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~-----Ild~v~~~L~L~~--~~~~~s~~vl~~yGN~SSasi~~vL~~~ 114 (154)
T d1bi5a2 42 KNITKALVEAFEPLGISDYNSIFWIAHPGGPA-----ILDQVEQKLALKP--EKMNATREVLSEYGNMSSACVLFILDEM 114 (154)
T ss_dssp HHHHHHHHHHHGGGTCCCTTSSEEEECCSSHH-----HHHHHHHHHTCCG--GGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccccceEeeccccHH-----HHHHHHHHhCCCH--HHHHHhHHHHHhcCCCCcccHHHHHHHH
Confidence 44567888999999999999999999954433 3445555555322 123222 224467888888755444333
Q ss_pred HHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 367 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 367 ~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
.. ++...+. .........++..+||-|=+...++|++.
T Consensus 115 ~~---~~~~~~~------------------~~~g~~~~~~~~~aFG~Glt~~~~llr~~ 152 (154)
T d1bi5a2 115 RK---KSTQNGL------------------KTTGEGLEWGVLFGFGPGLTIETVVLRSV 152 (154)
T ss_dssp HH---HHHHTTC------------------SBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HH---hhhccCC------------------cccCCCcCEEEEEEEchHHhHHHHHHhcC
Confidence 22 2221111 01112345677789998888888999874
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=93.36 E-value=0.29 Score=38.36 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
......+++.|+++|++.+|||++.+|--|.. =..++.+-++-.. .++..+ .+-..+|.+.+||=..-+-..
T Consensus 47 ~~v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~-----Ild~i~~~L~L~~--~~l~~s~~vl~~yGNtSSaSI~~vL~~~ 119 (160)
T d1ee0a2 47 KNIENAAEKALSPLGITDWNSVFWMVHPGGRA-----ILDQVERKLNLKE--DKLRASRHVLSEYGNLISACVLFIIDEV 119 (160)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSSHH-----HHHHHHHHTTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCccccceEeecCCcHH-----HHHHHHHHcCCCH--HHHHHHHHHHHHhCCCccchHHHHHHHH
Confidence 44567888999999999999999999944332 3444455444322 123222 234467898888755544433
Q ss_pred HHHHHhCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 367 VLAIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 367 ~~~l~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
. +++...+. .........++..+||-|=+-..++|++.
T Consensus 120 ~---~~~~~~~~------------------~~~g~~~d~~ll~afG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 120 R---KRSMAEGK------------------STTGEGLDCGVLFGFGPGMTVETVVLRSV 157 (160)
T ss_dssp H---HHHHHTTC------------------SBTBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred H---hhhhhcCC------------------CCcCCCcCEEEEEEEChHHHHHHHHHeec
Confidence 3 22221110 11112345777889998888888999875
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=90.86 E-value=0.72 Score=35.76 Aligned_cols=109 Identities=12% Similarity=0.063 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceec-ccccccchhHHhHHHHHHHHH
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS-STKGAIGHLLGAAGAVEAIFA 366 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~ 366 (426)
......+++.|++++++.+|||++..|--|.. =..++.+-++-.. .+++.+ .+-..+|.+.+||=..-+-.+
T Consensus 43 ~~i~~~~~~~l~~~~~~~~did~~i~Hqgg~~-----Ild~v~~~L~L~~--~k~~~s~~~l~~~GN~sSasip~~L~~~ 115 (156)
T d1u0ua2 43 ANIENCMVEAFSQFKISDWNKLFWVVHPGGRA-----ILDRVEAKLNLDP--TKLIPTRHVMSEYGNMSSACVHFILDQT 115 (156)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSCHH-----HHHHHHHHHTCCT--TTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCChhhCceEeecCCcHH-----HHHHHHHHhCCCc--ccchhhHHHHhhcCCCCcccHHHHHHHH
Confidence 44567889999999999999999999954433 3444555554322 122221 123467888888754443333
Q ss_pred HHHHH-hCCcCCCCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccccccceeeeEeeec
Q 014349 367 VLAIH-HGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 425 (426)
Q Consensus 367 ~~~l~-~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~gG~~~~~vl~~~ 425 (426)
...-. .+. .........++..+||-|=+...+||++.
T Consensus 116 ~~~~~~~~~----------------------~~~~~~~~~~~~~gfG~Glt~~~~llr~~ 153 (156)
T d1u0ua2 116 RKASLQNGC----------------------STTGEGLEMGVLFGFGPGLTIETVVLKSV 153 (156)
T ss_dssp HHHHHHHTC----------------------SBSBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHhhhhccC----------------------CCcCCCCCEEEEEEECHHHhHHHHHHeeC
Confidence 22211 111 11122346777789998878888998875
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=88.20 E-value=0.37 Score=39.26 Aligned_cols=78 Identities=15% Similarity=-0.022 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCHHHHHHHHHHhhcccCCCcceecccccccchhHHhHHHHHHHHHHH
Q 014349 289 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 368 (426)
Q Consensus 289 ~~~~a~~~al~~agl~~~dId~v~~hgtgt~~~D~~E~~a~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~ 368 (426)
...+|++++|+++|++|+|||++... +.|...-+.=...+..-++.. ..+.. -.+.+...++++..+-.+.-
T Consensus 78 la~~Aa~~aL~~ag~~~~dId~lI~~-s~t~~~~P~~aa~v~~~lg~~---~~~~~----~~i~~~gC~g~~~al~~A~~ 149 (200)
T d1u0ma1 78 RVPAVIQRALDDAELLATDIDVIIYV-SCTGFMMPSLTAWLINEMGFD---STTRQ----IPIAQLGCAAGGAAINRAHD 149 (200)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEE-CSSSCCSSCHHHHHHHHTTCC---TTCEE----EEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChhhhheEEEe-ccCCCCcchhHHHHHHHHhcC---CCeeE----eccccchhhHHHHHHHHHHH
Confidence 35689999999999999999998754 444432121111122222211 01111 12234456667777777777
Q ss_pred HHHhCC
Q 014349 369 AIHHGV 374 (426)
Q Consensus 369 ~l~~~~ 374 (426)
.++.+.
T Consensus 150 ~l~~~~ 155 (200)
T d1u0ma1 150 FCTAYP 155 (200)
T ss_dssp HHHHST
T ss_pred HHHhCC
Confidence 777653
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=84.68 E-value=0.52 Score=37.28 Aligned_cols=46 Identities=24% Similarity=0.109 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC-CCHHHHHHHHHHhh
Q 014349 288 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFS 334 (426)
Q Consensus 288 ~~~~~a~~~al~~agl~~~dId~v~~hgtgt~~-~D~~E~~a~~~~~~ 334 (426)
....++.+++|+++|++|+|||++... +.|+. ..+.-+..+.+-++
T Consensus 51 ~ma~~Aa~~aL~~agi~~~dIdlli~~-s~t~~~~~p~~a~~v~~~Lg 97 (172)
T d1ub7a1 51 DLAFKAVEDLLRRHPGALEGVDAVIVA-TNTPDALFPDTAALVQARFG 97 (172)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEEEEEEE-CSSCSEEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhcCcccccceEEEEe-cccccccccchHHHHHHHhc
Confidence 455789999999999999999998876 34442 23334445555555
|